Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776720 | XP_039690018.1 | 94.686 | 207 | 10 | 1 | 264 | 469 | 15 | 221 | 1.92e-133 | 401 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776720 | A0A396HTG6 | 94.686 | 207 | 10 | 1 | 264 | 469 | 15 | 221 | 9.16e-134 | 401 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0737520 | Msa0776720 | 0.807693 | 4.463086e-50 | -8.615850e-47 |
| Msa0776720 | Msa0813950 | 0.808873 | 2.500829e-50 | -8.615850e-47 |
| Msa0776720 | Msa0854620 | 0.813651 | 2.297379e-51 | -8.615850e-47 |
| Msa0776720 | Msa0872420 | 0.801174 | 1.019698e-48 | -8.615850e-47 |
| Msa0776720 | Msa0905720 | 0.811117 | 8.219693e-51 | -8.615850e-47 |
| Msa0776720 | Msa1027290 | 0.819105 | 1.382683e-52 | -8.615850e-47 |
| Msa0776720 | Msa1198090 | 0.802793 | 4.738739e-49 | -8.615850e-47 |
| Msa0212310 | Msa0776720 | 0.809560 | 1.781831e-50 | -8.615850e-47 |
| Msa0313920 | Msa0776720 | 0.830757 | 2.453056e-55 | -8.615850e-47 |
| Msa0503190 | Msa0776720 | 0.806324 | 8.692480e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0776720 | MtrunA17_Chr5g0431801 | 94.686 | 207 | 10 | 1 | 264 | 469 | 15 | 221 | 1.76e-137 | 401 |
| Msa0776720 | MtrunA17_Chr5g0431851 | 90.338 | 207 | 19 | 1 | 263 | 469 | 14 | 219 | 3.87e-123 | 363 |
| Msa0776720 | MtrunA17_Chr5g0431821 | 79.204 | 226 | 28 | 1 | 263 | 469 | 14 | 239 | 9.95e-119 | 357 |
| Msa0776720 | MtrunA17_Chr5g0431741 | 62.381 | 210 | 74 | 4 | 263 | 469 | 14 | 221 | 5.62e-75 | 251 |
| Msa0776720 | MtrunA17_Chr5g0432041 | 59.135 | 208 | 80 | 3 | 263 | 470 | 15 | 217 | 9.98e-74 | 248 |
| Msa0776720 | MtrunA17_Chr5g0431761 | 59.070 | 215 | 81 | 5 | 263 | 474 | 14 | 224 | 2.82e-73 | 244 |
| Msa0776720 | MtrunA17_Chr5g0431811 | 55.882 | 238 | 71 | 4 | 264 | 469 | 15 | 250 | 1.42e-71 | 248 |
| Msa0776720 | MtrunA17_Chr5g0432181 | 51.600 | 250 | 92 | 6 | 263 | 493 | 14 | 253 | 4.19e-71 | 231 |
| Msa0776720 | MtrunA17_Chr5g0432091 | 60.680 | 206 | 76 | 4 | 265 | 467 | 16 | 219 | 4.00e-67 | 231 |
| Msa0776720 | MtrunA17_Chr5g0431981 | 55.450 | 211 | 86 | 4 | 263 | 470 | 14 | 219 | 2.09e-65 | 217 |
| Msa0776720 | MtrunA17_Chr3g0104851 | 59.064 | 171 | 66 | 2 | 263 | 430 | 28 | 197 | 2.41e-60 | 211 |
| Msa0776720 | MtrunA17_Chr5g0431991 | 55.385 | 195 | 83 | 4 | 263 | 457 | 14 | 204 | 3.09e-59 | 203 |
| Msa0776720 | MtrunA17_Chr5g0444661 | 63.158 | 152 | 54 | 2 | 263 | 414 | 15 | 164 | 7.61e-59 | 202 |
| Msa0776720 | MtrunA17_Chr7g0231451 | 52.284 | 197 | 83 | 6 | 261 | 451 | 9 | 200 | 2.53e-53 | 183 |
| Msa0776720 | MtrunA17_Chr5g0431751 | 55.135 | 185 | 56 | 4 | 263 | 446 | 14 | 172 | 1.76e-52 | 181 |
| Msa0776720 | MtrunA17_Chr5g0431921 | 55.000 | 160 | 68 | 4 | 263 | 421 | 14 | 170 | 7.81e-48 | 167 |
| Msa0776720 | MtrunA17_Chr5g0432051 | 55.128 | 156 | 68 | 2 | 266 | 421 | 28 | 181 | 4.55e-44 | 157 |
| Msa0776720 | MtrunA17_Chr5g0432031 | 48.810 | 168 | 83 | 3 | 255 | 421 | 17 | 182 | 1.31e-41 | 150 |
| Msa0776720 | MtrunA17_Chr5g0431951 | 52.542 | 118 | 54 | 2 | 262 | 379 | 27 | 142 | 2.45e-32 | 121 |
| Msa0776720 | MtrunA17_Chr5g0431891 | 68.817 | 93 | 10 | 1 | 396 | 469 | 1 | 93 | 2.56e-28 | 114 |
| Msa0776720 | MtrunA17_Chr6g0482231 | 36.932 | 176 | 110 | 1 | 267 | 442 | 109 | 283 | 8.38e-27 | 112 |
| Msa0776720 | MtrunA17_Chr6g0482191 | 40.506 | 158 | 93 | 1 | 266 | 423 | 477 | 633 | 1.38e-26 | 114 |
| Msa0776720 | MtrunA17_Chr5g0431961 | 64.000 | 75 | 26 | 1 | 265 | 339 | 17 | 90 | 1.48e-26 | 103 |
| Msa0776720 | MtrunA17_Chr5g0444671 | 38.750 | 160 | 73 | 4 | 267 | 426 | 15 | 149 | 1.62e-20 | 89.0 |
| Msa0776720 | MtrunA17_Chr6g0482151 | 38.406 | 138 | 83 | 2 | 276 | 413 | 4 | 139 | 4.26e-19 | 84.7 |
| Msa0776720 | MtrunA17_Chr5g0431911 | 34.946 | 186 | 78 | 5 | 263 | 446 | 14 | 158 | 2.66e-13 | 67.8 |
| Msa0776720 | MtrunA17_Chr6g0480951 | 43.023 | 86 | 46 | 2 | 267 | 350 | 226 | 310 | 9.69e-12 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 106 sgRNAs with CRISPR-Local
Find 456 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAATTCAGTGGTTCTTAATA+TGG | 0.196083 | 5_2:+55239124 | Msa0776720:CDS |
| TTTGTCTGGATCGCCCTTTC+GGG | 0.216424 | 5_2:-55233450 | None:intergenic |
| AGAATAAAGGAATGCATCTT+AGG | 0.218163 | 5_2:+55240149 | Msa0776720:CDS |
| CACAGCACTGAACAGCTTAA+AGG | 0.242225 | 5_2:-55239727 | None:intergenic |
| GGATTTGCTGCTGTTGTTGC+TGG | 0.254444 | 5_2:+55238612 | Msa0776720:CDS |
| TTTGCATGAACCGCCCTTTC+GGG | 0.255519 | 5_2:-55233559 | None:intergenic |
| GATCGAACTTGCTGCTTGAC+TGG | 0.270351 | 5_2:-55235356 | None:intergenic |
| TCTTCCTTCAACTATCTCTT+TGG | 0.283998 | 5_2:+55238657 | Msa0776720:CDS |
| GGAAGATACAAGCTGTTCTT+TGG | 0.289532 | 5_2:-55235259 | None:intergenic |
| GACAGGTTCAAGCTGTTCTT+TGG | 0.290823 | 5_2:-55235318 | None:intergenic |
| GGCAGGTACAAACTGTTCTT+TGG | 0.310708 | 5_2:-55235199 | None:intergenic |
| GAGGACCCTTGGAAGATTCT+TGG | 0.311123 | 5_2:-55234393 | None:intergenic |
| ATTTACATGGAGATCCTCTT+TGG | 0.318348 | 5_2:-55234475 | None:intergenic |
| TCATACAACATTTGTTGTAT+TGG | 0.324138 | 5_2:+55238794 | Msa0776720:CDS |
| GGTGAGTACAAGCTGTTCTT+TGG | 0.324304 | 5_2:-55235378 | None:intergenic |
| ATGGTTTCTCGCTAAAATTA+AGG | 0.334742 | 5_2:+55239256 | Msa0776720:CDS |
| GGATACAGGTCGCCGTTGTT+AGG | 0.363850 | 5_2:-55234372 | None:intergenic |
| TTTGGATCGAACTTGTTGTT+TGG | 0.370614 | 5_2:-55235181 | None:intergenic |
| TCTTAGGGATTCATGTTCAT+TGG | 0.380029 | 5_2:+55240165 | Msa0776720:CDS |
| GGGCGATCCAGACAAAAGTT+AGG | 0.395505 | 5_2:+55233457 | Msa0776720:CDS |
| TCAGATGTCAAAGAGAATAA+AGG | 0.396676 | 5_2:+55240136 | Msa0776720:intron |
| CCCTTCTCCGACGCGGTGGC+CGG | 0.399224 | 5_2:-55237276 | None:intergenic |
| TAATATGGATTCTCTACAAC+TGG | 0.399665 | 5_2:+55239139 | Msa0776720:CDS |
| TCCTTCAACTATCTCTTTGG+AGG | 0.401422 | 5_2:+55238660 | Msa0776720:CDS |
| GATCGAACTTGTCACTTGAC+TGG | 0.408703 | 5_2:-55235296 | None:intergenic |
| TTCGAAATCCGAAAATAAAT+CGG | 0.414011 | 5_2:-55236997 | None:intergenic |
| CTTGGAAGATTCTTGGATAC+AGG | 0.415306 | 5_2:-55234386 | None:intergenic |
| CAACTGGCTAGTACTAATAT+TGG | 0.425336 | 5_2:+55239155 | Msa0776720:CDS |
| CTGGTCCATGTAGCGGCTGC+TGG | 0.430691 | 5_2:+55239760 | Msa0776720:CDS |
| ATGTGCGTCCTTTGCTGTCA+CGG | 0.435172 | 5_2:+55238890 | Msa0776720:CDS |
| CCCACAAATCTCCACACCTT+TGG | 0.444313 | 5_2:-55238591 | None:intergenic |
| GAACCACTGAATTTCCATCT+TGG | 0.449916 | 5_2:-55239115 | None:intergenic |
| CCAAAGGTGTGGAGATTTGT+GGG | 0.449986 | 5_2:+55238591 | Msa0776720:CDS |
| ATCGAACTTGCTGCTTGACT+GGG | 0.452237 | 5_2:-55235355 | None:intergenic |
| GATTGAAAATTCAAACAGAT+AGG | 0.462876 | 5_2:-55235220 | None:intergenic |
| CCGGTGGTGCACCGCCGCGT+CGG | 0.469324 | 5_2:-55237257 | None:intergenic |
| AGTGCTGTGCTGCTATCTGC+TGG | 0.472010 | 5_2:+55239741 | Msa0776720:CDS |
| CTAGTACTAATATTGGTAGT+AGG | 0.477743 | 5_2:+55239162 | Msa0776720:CDS |
| ACCGGCCACCGCGTCGGAGA+AGG | 0.478752 | 5_2:+55237275 | Msa0776720:CDS |
| GAAATGAGACTCCATGCATC+TGG | 0.481164 | 5_2:-55238867 | None:intergenic |
| TGACTGGAACATAGACATAT+AGG | 0.481326 | 5_2:-55235280 | None:intergenic |
| TCCTCCAAAGAGATAGTTGA+AGG | 0.485636 | 5_2:-55238661 | None:intergenic |
| GAATAAAGGAATGCATCTTA+GGG | 0.485924 | 5_2:+55240150 | Msa0776720:CDS |
| CCGACGCGGCGGTGCACCAC+CGG | 0.491944 | 5_2:+55237257 | Msa0776720:CDS |
| GAAAATTCAAACAGATAGGC+AGG | 0.497140 | 5_2:-55235216 | None:intergenic |
| AACTTGTAGAGGAGGACCCT+TGG | 0.499779 | 5_2:-55234404 | None:intergenic |
| ATCATCTCCGATTCGAGCTA+AGG | 0.503628 | 5_2:+55237062 | Msa0776720:CDS |
| CGGAGATGATGATGAAGCTA+CGG | 0.504562 | 5_2:-55237049 | None:intergenic |
| TCAACTATCTCTTTGGAGGA+TGG | 0.506399 | 5_2:+55238664 | Msa0776720:CDS |
| AGCGAGAAACCATTGTTCCT+CGG | 0.510675 | 5_2:-55239246 | None:intergenic |
| ATGGACCAGCAGCCGCTACA+TGG | 0.511356 | 5_2:-55239765 | None:intergenic |
| GAAGAAATTGACAGCTGTGT+TGG | 0.513731 | 5_2:+55240187 | Msa0776720:CDS |
| CGACGAGACCTCCCTTGCTC+CGG | 0.513890 | 5_2:-55237309 | None:intergenic |
| TACTAATATTGGTAGTAGGT+TGG | 0.517377 | 5_2:+55239166 | Msa0776720:CDS |
| GGCGATCCAGACAAAAGTTA+GGG | 0.519335 | 5_2:+55233458 | Msa0776720:CDS |
| GGCAACACTCAAGAAGTCAT+TGG | 0.523682 | 5_2:+55238763 | Msa0776720:CDS |
| TCTAGCATCTATTGAAGGAA+AGG | 0.524621 | 5_2:-55239069 | None:intergenic |
| AGGAGTAGATTTCATAACAT+TGG | 0.525454 | 5_2:+55240210 | Msa0776720:exon |
| GAAGAAGATGACCGGAGCAA+GGG | 0.528119 | 5_2:+55237298 | Msa0776720:CDS |
| TGCATAATACGCCAGATGCA+TGG | 0.531259 | 5_2:+55238856 | Msa0776720:CDS |
| GCTGAGATTGTACGCAACTC+AGG | 0.533611 | 5_2:+55233507 | Msa0776720:CDS |
| TTCTCCGACGCGGTGGCCGG+TGG | 0.535757 | 5_2:-55237273 | None:intergenic |
| GAGGTTACCTTAGCTCGAAT+CGG | 0.537926 | 5_2:-55237069 | None:intergenic |
| CCGGCCACCGCGTCGGAGAA+GGG | 0.539776 | 5_2:+55237276 | Msa0776720:CDS |
| GATGAGCCGAAAACCCGAAA+GGG | 0.543920 | 5_2:+55233546 | Msa0776720:CDS |
| GGAAGAAGATGACCGGAGCA+AGG | 0.545522 | 5_2:+55237297 | Msa0776720:CDS |
| GAAATTGACAGCTGTGTTGG+AGG | 0.545616 | 5_2:+55240190 | Msa0776720:CDS |
| GGTGGATCGAAAACCCGAAA+GGG | 0.546240 | 5_2:+55233437 | Msa0776720:CDS |
| TGCACCACCGGCCACCGCGT+CGG | 0.557875 | 5_2:+55237269 | Msa0776720:CDS |
| GCACTTGAATTGCGAAGTAG+AGG | 0.558113 | 5_2:-55236838 | None:intergenic |
| GGAGATGATGATGAAGCTAC+GGG | 0.560838 | 5_2:-55237048 | None:intergenic |
| CAGTGCTCTGAATTCCAAGA+TGG | 0.561368 | 5_2:+55239101 | Msa0776720:CDS |
| ACGTATCAAAACCATGGCTG+AGG | 0.562335 | 5_2:-55234434 | None:intergenic |
| GGCAATAAAACTTGTAGAGG+AGG | 0.565044 | 5_2:-55234412 | None:intergenic |
| GCCAAAGGTGTGGAGATTTG+TGG | 0.566628 | 5_2:+55238590 | Msa0776720:intron |
| AAAAGCAACACAGAACTACA+TGG | 0.570086 | 5_2:-55239784 | None:intergenic |
| GAAGATGACCGGAGCAAGGG+AGG | 0.586490 | 5_2:+55237301 | Msa0776720:CDS |
| GCTAAAATTAAGGATTTCCG+AGG | 0.595187 | 5_2:+55239266 | Msa0776720:CDS |
| GGAGAAGGGAAGAAGATGAC+CGG | 0.595549 | 5_2:+55237290 | Msa0776720:CDS |
| CTGTATCCAAGAATCTTCCA+AGG | 0.597384 | 5_2:+55234387 | Msa0776720:CDS |
| CGTATCAAAACCATGGCTGA+GGG | 0.597520 | 5_2:-55234433 | None:intergenic |
| TAACGACGGTCTCTCCAAAG+AGG | 0.598556 | 5_2:+55234461 | Msa0776720:CDS |
| TCACGGCGCTTAGTTTGTCA+AGG | 0.598752 | 5_2:+55238907 | Msa0776720:CDS |
| CGGTGGATCGAAAACCCGAA+AGG | 0.607798 | 5_2:+55233436 | Msa0776720:CDS |
| ACTAAGCGCCGTGACAGCAA+AGG | 0.607967 | 5_2:-55238898 | None:intergenic |
| GAGGGCAATAAAACTTGTAG+AGG | 0.608749 | 5_2:-55234415 | None:intergenic |
| CGATGAGCCGAAAACCCGAA+AGG | 0.613718 | 5_2:+55233545 | Msa0776720:CDS |
| AGCACTGACACGCCTAACAA+CGG | 0.625107 | 5_2:+55234360 | Msa0776720:intron |
| ATTCCAAGATGGAAATTCAG+TGG | 0.625640 | 5_2:+55239112 | Msa0776720:CDS |
| TCGAACTTGCTGCTTGACTG+GGG | 0.634369 | 5_2:-55235354 | None:intergenic |
| TAAAAGACGTATCAAAACCA+TGG | 0.634483 | 5_2:-55234440 | None:intergenic |
| GGGGAATAGAAACACAGGAC+AGG | 0.636406 | 5_2:-55235335 | None:intergenic |
| TCTTCCCTTCTCCGACGCGG+TGG | 0.638084 | 5_2:-55237280 | None:intergenic |
| CTATCTGCTGGTCCATGTAG+CGG | 0.639553 | 5_2:+55239753 | Msa0776720:CDS |
| CTATTGAAGGAAAGGATGAA+CGG | 0.640738 | 5_2:-55239061 | None:intergenic |
| GAGCCGAAAACCCGAAAGGG+CGG | 0.644443 | 5_2:+55233549 | Msa0776720:CDS |
| CTTTGGAGGATGGACCATGT+TGG | 0.645605 | 5_2:+55238674 | Msa0776720:CDS |
| GGATGATGCAGCCAAAGGTG+TGG | 0.649228 | 5_2:+55238580 | Msa0776720:intron |
| AGCAGATTGGAGCTCCGACG+CGG | 0.654132 | 5_2:+55237243 | Msa0776720:intron |
| TCAAGGAACGAAACTCAATG+TGG | 0.661190 | 5_2:+55238924 | Msa0776720:CDS |
| TCTTCTTCCCTTCTCCGACG+CGG | 0.663744 | 5_2:-55237283 | None:intergenic |
| TGACTGGGGAATAGAAACAC+AGG | 0.677694 | 5_2:-55235340 | None:intergenic |
| AGATTGGAGCTCCGACGCGG+CGG | 0.687997 | 5_2:+55237246 | Msa0776720:intron |
| TGAGTGTTGCCATATCCTTG+CGG | 0.691705 | 5_2:-55238751 | None:intergenic |
| TGTATCCAAGAATCTTCCAA+GGG | 0.692104 | 5_2:+55234388 | Msa0776720:CDS |
| GTAAAGAGTTATCACCAACA+TGG | 0.757087 | 5_2:-55238688 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAATAGTTTTTAACA+GGG | - | chr5_2:55236140-55236159 | None:intergenic | 10.0% |
| !!! | ATTTTAAAATAGTTTTTAAC+AGG | - | chr5_2:55236141-55236160 | None:intergenic | 10.0% |
| !!! | ATTTTATATGTTAAAACTTT+AGG | + | chr5_2:55237636-55237655 | Msa0776720:intron | 10.0% |
| !!! | AGTTTTTTTAGAATTTTTAA+AGG | - | chr5_2:55237744-55237763 | None:intergenic | 10.0% |
| !!! | ATGTTTTATATTAAAAAACT+TGG | + | chr5_2:55237861-55237880 | Msa0776720:intron | 10.0% |
| !!! | TGTTTTATATTAAAAAACTT+GGG | + | chr5_2:55237862-55237881 | Msa0776720:intron | 10.0% |
| !!! | TTCAAATGTAATTTTTGAAA+AGG | - | chr5_2:55235991-55236010 | None:intergenic | 15.0% |
| !!! | ATTGAAAGAAATTTTAACAT+AGG | - | chr5_2:55236058-55236077 | None:intergenic | 15.0% |
| !!! | TTTAAAATAGTTTTTAACAG+GGG | - | chr5_2:55236139-55236158 | None:intergenic | 15.0% |
| !! | CAAAAATAAAATCAACAAAA+AGG | - | chr5_2:55236284-55236303 | None:intergenic | 15.0% |
| !!! | CTTTTTGTTGATTTTATTTT+TGG | + | chr5_2:55236282-55236301 | Msa0776720:intron | 15.0% |
| !!! | AATGTTTGTAGTTTTTAAAT+CGG | + | chr5_2:55237220-55237239 | Msa0776720:intron | 15.0% |
| !!! | TGGAATTTTTAAAGAAATTT+AGG | - | chr5_2:55237569-55237588 | None:intergenic | 15.0% |
| !! | TTATTACATTCAATAATATG+AGG | - | chr5_2:55238112-55238131 | None:intergenic | 15.0% |
| !!! | TTGATGTTATGATAAATTTT+AGG | + | chr5_2:55238182-55238201 | Msa0776720:intron | 15.0% |
| !!! | TGATGTTATGATAAATTTTA+GGG | + | chr5_2:55238183-55238202 | Msa0776720:intron | 15.0% |
| !! | AAAAATTTAATTGAATGCAA+GGG | - | chr5_2:55240000-55240019 | None:intergenic | 15.0% |
| !! | AAAATTTCTATGAAATGTAG+CGG | + | chr5_2:55233696-55233715 | Msa0776720:intron | 20.0% |
| !!! | AAAATGGTAATTTTATTGGT+TGG | - | chr5_2:55233742-55233761 | None:intergenic | 20.0% |
| !!! | TTGGAAAATGGTAATTTTAT+TGG | - | chr5_2:55233746-55233765 | None:intergenic | 20.0% |
| !! | TTGAATTGAAAGTTAAGATT+GGG | - | chr5_2:55234678-55234697 | None:intergenic | 20.0% |
| !!! | ATTAACATTTTCACTGTTTT+TGG | - | chr5_2:55235616-55235635 | None:intergenic | 20.0% |
| !!! | TATTTTTAGGTCCAAAATTA+GGG | - | chr5_2:55235724-55235743 | None:intergenic | 20.0% |
| !!! | AAATGCAAGAAAGATATTTT+GGG | - | chr5_2:55235782-55235801 | None:intergenic | 20.0% |
| !!! | AGAAATTTTAACATAGGAAA+TGG | - | chr5_2:55236052-55236071 | None:intergenic | 20.0% |
| !!! | AAAACATGTGGAAATTTTTT+TGG | - | chr5_2:55237589-55237608 | None:intergenic | 20.0% |
| !! | GAAAATTATCAAAAAACATG+TGG | - | chr5_2:55237601-55237620 | None:intergenic | 20.0% |
| !!! | CACTATTTTGTTAAAATTTG+TGG | + | chr5_2:55237690-55237709 | Msa0776720:intron | 20.0% |
| !!! | GATGTTATGATAAATTTTAG+GGG | + | chr5_2:55238184-55238203 | Msa0776720:intron | 20.0% |
| !!! | ACTTTTTGTCAAATTTTTAG+TGG | + | chr5_2:55238239-55238258 | Msa0776720:intron | 20.0% |
| !!! | GCATTGAAATTATTCATTTT+TGG | + | chr5_2:55239008-55239027 | Msa0776720:CDS | 20.0% |
| !!! | CAAAAATCATTTTGATACAT+TGG | + | chr5_2:55239477-55239496 | Msa0776720:intron | 20.0% |
| !! | CAAAAATTTAATTGAATGCA+AGG | - | chr5_2:55240001-55240020 | None:intergenic | 20.0% |
| !!! | GTAGTGTTTAATTTATGTTA+AGG | + | chr5_2:55240071-55240090 | Msa0776720:intron | 20.0% |
| ! | AAAAGACAAGTAACTATATC+TGG | + | chr5_2:55233596-55233615 | Msa0776720:intron | 25.0% |
| ! | CAATGAAAACAATTTATTCC+CGG | + | chr5_2:55234222-55234241 | Msa0776720:intron | 25.0% |
| ! | GTTGAATTGAAAGTTAAGAT+TGG | - | chr5_2:55234679-55234698 | None:intergenic | 25.0% |
| ! | CAGAGATGTAAATATTGAAT+TGG | - | chr5_2:55234783-55234802 | None:intergenic | 25.0% |
| ! | GATTGAAAATTCAAACAGAT+AGG | - | chr5_2:55235223-55235242 | None:intergenic | 25.0% |
| !! | TGTTTGAATTTTCAATCAAG+CGG | + | chr5_2:55235226-55235245 | Msa0776720:CDS | 25.0% |
| !!! | GTATTTTTAGGTCCAAAATT+AGG | - | chr5_2:55235725-55235744 | None:intergenic | 25.0% |
| !! | AGAATTGAGCTAGTATTTTT+AGG | - | chr5_2:55235737-55235756 | None:intergenic | 25.0% |
| !! | GAAATGCAAGAAAGATATTT+TGG | - | chr5_2:55235783-55235802 | None:intergenic | 25.0% |
| ! | ACTTGCAAAATTCATGAAAA+AGG | + | chr5_2:55235861-55235880 | Msa0776720:intron | 25.0% |
| ! | CTTGCAAAATTCATGAAAAA+GGG | + | chr5_2:55235862-55235881 | Msa0776720:intron | 25.0% |
| !!! | TTTTGAAAAGGATTTTGACA+TGG | - | chr5_2:55235979-55235998 | None:intergenic | 25.0% |
| ! | AAGTACCTCATTTATGTAAT+TGG | + | chr5_2:55236247-55236266 | Msa0776720:intron | 25.0% |
| ! | ATGAACCAATTACATAAATG+AGG | - | chr5_2:55236255-55236274 | None:intergenic | 25.0% |
| ! | ACTAAAGTGCAAATAACAAA+AGG | - | chr5_2:55236369-55236388 | None:intergenic | 25.0% |
| ! | CTGCAAAAAACTGAAATAAA+AGG | - | chr5_2:55236392-55236411 | None:intergenic | 25.0% |
| !!! | AAACGAAACCGATTTATTTT+CGG | + | chr5_2:55236989-55237008 | Msa0776720:CDS | 25.0% |
| ! | TTCGAAATCCGAAAATAAAT+CGG | - | chr5_2:55237000-55237019 | None:intergenic | 25.0% |
| !!! | AGATCTAATAGTTTTGGATT+CGG | - | chr5_2:55237131-55237150 | None:intergenic | 25.0% |
| !! | AAACTTTAGGAAAATATGTG+TGG | + | chr5_2:55237649-55237668 | Msa0776720:intron | 25.0% |
| !!! | TTCATTTTGTGATGTTTTTG+TGG | + | chr5_2:55237779-55237798 | Msa0776720:intron | 25.0% |
| ! | AAAAATTGGAGTCAAAATTG+TGG | - | chr5_2:55237896-55237915 | None:intergenic | 25.0% |
| !! | ACATCATGACAATTTTCTAA+AGG | - | chr5_2:55238137-55238156 | None:intergenic | 25.0% |
| ! | TAAAGGCTAAGAATATAAGA+TGG | - | chr5_2:55238354-55238373 | None:intergenic | 25.0% |
| ! | NNNNNNATCCTAAGTAGAAG+AGG | + | chr5_2:55238472-55238491 | Msa0776720:intron | 25.0% |
| ! | GTAAGAATTAATTTCACAGA+TGG | - | chr5_2:55238515-55238534 | None:intergenic | 25.0% |
| ! | CACATATTCTATTCCAAATT+TGG | + | chr5_2:55238553-55238572 | Msa0776720:intron | 25.0% |
| !!! | TCATACAACATTTGTTGTAT+TGG | + | chr5_2:55238794-55238813 | Msa0776720:CDS | 25.0% |
| !! | GATCTTCTATATTTTCTTCT+TGG | + | chr5_2:55238957-55238976 | Msa0776720:CDS | 25.0% |
| ! | AAATTCAGTGGTTCTTAATA+TGG | + | chr5_2:55239124-55239143 | Msa0776720:CDS | 25.0% |
| !! | ATGGTAATTTTATTGGTTGG+TGG | - | chr5_2:55233739-55233758 | None:intergenic | 30.0% |
| ! | AGGTTTGCTTTCAAAATAGA+CGG | - | chr5_2:55233951-55233970 | None:intergenic | 30.0% |
| TTTATTCATGCATGTTTCAC+TGG | - | chr5_2:55233991-55234010 | None:intergenic | 30.0% | |
| TAAAAGACGTATCAAAACCA+TGG | - | chr5_2:55234443-55234462 | None:intergenic | 30.0% | |
| ! | TTTGATACGTCTTTTAACGA+CGG | + | chr5_2:55234447-55234466 | Msa0776720:CDS | 30.0% |
| CGTGCTATAACATATTTACA+TGG | - | chr5_2:55234491-55234510 | None:intergenic | 30.0% | |
| AGACAAAACATCGAAAGATT+GGG | - | chr5_2:55234526-55234545 | None:intergenic | 30.0% | |
| GAGTTGAATTGGAAATGAAA+TGG | - | chr5_2:55234748-55234767 | None:intergenic | 30.0% | |
| !! | GAGTTGAAATTGAGTTGAAT+TGG | - | chr5_2:55234759-55234778 | None:intergenic | 30.0% |
| CATAAACATTGACATAGACA+TGG | - | chr5_2:55234825-55234844 | None:intergenic | 30.0% | |
| AATTCCCTCTCAATTTAATC+TGG | + | chr5_2:55234892-55234911 | Msa0776720:intron | 30.0% | |
| ATTCCCTCTCAATTTAATCT+GGG | + | chr5_2:55234893-55234912 | Msa0776720:intron | 30.0% | |
| TGTAGCAAGATACAAATTGA+GGG | - | chr5_2:55234968-55234987 | None:intergenic | 30.0% | |
| ATGTAGCAAGATACAAATTG+AGG | - | chr5_2:55234969-55234988 | None:intergenic | 30.0% | |
| AGACACATAGACATATAAGT+AGG | - | chr5_2:55235040-55235059 | None:intergenic | 30.0% | |
| TACTTATATGTCTATGTGTC+TGG | + | chr5_2:55235039-55235058 | Msa0776720:intron | 30.0% | |
| TGATCAATATCACAACATGT+AGG | - | chr5_2:55235104-55235123 | None:intergenic | 30.0% | |
| !! | TTCATAATCAAAGTGTTGCA+TGG | + | chr5_2:55235551-55235570 | Msa0776720:intron | 30.0% |
| ! | CCTATTTAAGTTTCTTTGTC+CGG | - | chr5_2:55235688-55235707 | None:intergenic | 30.0% |
| CGGACAAAGAAACTTAAATA+GGG | + | chr5_2:55235686-55235705 | Msa0776720:intron | 30.0% | |
| GGACAAAGAAACTTAAATAG+GGG | + | chr5_2:55235687-55235706 | Msa0776720:intron | 30.0% | |
| ACTAAAGTGAATTTGAATGC+AGG | - | chr5_2:55235902-55235921 | None:intergenic | 30.0% | |
| ! | ATTGTTTGAGTCTTTTCACT+TGG | + | chr5_2:55235930-55235949 | Msa0776720:intron | 30.0% |
| TGGACTTGTAACTAACTTTA+TGG | - | chr5_2:55236421-55236440 | None:intergenic | 30.0% | |
| ATGAGTTGTAACAGAATGAA+TGG | - | chr5_2:55236524-55236543 | None:intergenic | 30.0% | |
| ! | TGAACTTCTTGATCTGTTTT+TGG | - | chr5_2:55236576-55236595 | None:intergenic | 30.0% |
| ! | TCTTGGATTTTGTTGGATTA+GGG | - | chr5_2:55236634-55236653 | None:intergenic | 30.0% |
| ! | TTCTTGGATTTTGTTGGATT+AGG | - | chr5_2:55236635-55236654 | None:intergenic | 30.0% |
| ! | TGATGATTCTTGGATTTTGT+TGG | - | chr5_2:55236641-55236660 | None:intergenic | 30.0% |
| ACTTTGATTGTGATGATTCT+TGG | - | chr5_2:55236651-55236670 | None:intergenic | 30.0% | |
| ! | GCGAAATCAATGATCAATTT+TGG | - | chr5_2:55236682-55236701 | None:intergenic | 30.0% |
| !!! | ATTGTTGCTATTGGTTTTTC+TGG | - | chr5_2:55236753-55236772 | None:intergenic | 30.0% |
| AAAGTACGAAATCGAAAAGA+GGG | + | chr5_2:55237180-55237199 | Msa0776720:intron | 30.0% | |
| AAAGAAATTTAGGCAAAGCA+GGG | - | chr5_2:55237559-55237578 | None:intergenic | 30.0% | |
| TAAAGAAATTTAGGCAAAGC+AGG | - | chr5_2:55237560-55237579 | None:intergenic | 30.0% | |
| CACAAGCATACACTAAAAAT+TGG | - | chr5_2:55237910-55237929 | None:intergenic | 30.0% | |
| TAGAAAATTGTCATGATGTG+AGG | + | chr5_2:55238138-55238157 | Msa0776720:intron | 30.0% | |
| TAGCATAAGGCATAATTGAA+TGG | - | chr5_2:55238283-55238302 | None:intergenic | 30.0% | |
| GTATGAAACATGAAGTAAAG+TGG | - | chr5_2:55238310-55238329 | None:intergenic | 30.0% | |
| TTCTATTCCAAATTTGGAGA+TGG | + | chr5_2:55238559-55238578 | Msa0776720:intron | 30.0% | |
| ! | TTTTCTCTAGCATCTATTGA+AGG | - | chr5_2:55239077-55239096 | None:intergenic | 30.0% |
| TAATATGGATTCTCTACAAC+TGG | + | chr5_2:55239139-55239158 | Msa0776720:CDS | 30.0% | |
| ! | CTAGTACTAATATTGGTAGT+AGG | + | chr5_2:55239162-55239181 | Msa0776720:CDS | 30.0% |
| ! | TACTAATATTGGTAGTAGGT+TGG | + | chr5_2:55239166-55239185 | Msa0776720:CDS | 30.0% |
| ATGGTTTCTCGCTAAAATTA+AGG | + | chr5_2:55239256-55239275 | Msa0776720:CDS | 30.0% | |
| ! | ATTTTCCTCGGTATTTAACT+TGG | - | chr5_2:55239364-55239383 | None:intergenic | 30.0% |
| AGCGTGTAATGTATTAAACA+AGG | + | chr5_2:55239425-55239444 | Msa0776720:intron | 30.0% | |
| GCAGAACTATATGTATTCAA+TGG | - | chr5_2:55239662-55239681 | None:intergenic | 30.0% | |
| ! | CTGTGATTTTGTAACTATAC+TGG | + | chr5_2:55239950-55239969 | Msa0776720:intron | 30.0% |
| ACTATACTGGATTTCCAAAT+TGG | + | chr5_2:55239963-55239982 | Msa0776720:intron | 30.0% | |
| TAAGTTGTTACCTTGCTTTA+CGG | + | chr5_2:55240033-55240052 | Msa0776720:intron | 30.0% | |
| TATTCTCTTTGACATCTGAA+GGG | - | chr5_2:55240135-55240154 | None:intergenic | 30.0% | |
| TTATTCTCTTTGACATCTGA+AGG | - | chr5_2:55240136-55240155 | None:intergenic | 30.0% | |
| TCAGATGTCAAAGAGAATAA+AGG | + | chr5_2:55240136-55240155 | Msa0776720:intron | 30.0% | |
| AGAATAAAGGAATGCATCTT+AGG | + | chr5_2:55240149-55240168 | Msa0776720:CDS | 30.0% | |
| GAATAAAGGAATGCATCTTA+GGG | + | chr5_2:55240150-55240169 | Msa0776720:CDS | 30.0% | |
| ! | TTTTGTCCCTAACTTTTGTC+TGG | - | chr5_2:55233467-55233486 | None:intergenic | 35.0% |
| GACTTACAAAGCTTGGAAAA+TGG | - | chr5_2:55233758-55233777 | None:intergenic | 35.0% | |
| AGAGTTTCAAACAATAGCAC+AGG | - | chr5_2:55233830-55233849 | None:intergenic | 35.0% | |
| AAGGCAATTCAGGCAAAAAT+GGG | + | chr5_2:55234198-55234217 | Msa0776720:intron | 35.0% | |
| TGTATCCAAGAATCTTCCAA+GGG | + | chr5_2:55234388-55234407 | Msa0776720:CDS | 35.0% | |
| ATTTACATGGAGATCCTCTT+TGG | - | chr5_2:55234478-55234497 | None:intergenic | 35.0% | |
| CAGACAAAACATCGAAAGAT+TGG | - | chr5_2:55234527-55234546 | None:intergenic | 35.0% | |
| TGAATGCTTGAAATGCATGA+TGG | - | chr5_2:55234582-55234601 | None:intergenic | 35.0% | |
| TTTAATCTGGGCCAACAATA+TGG | + | chr5_2:55234905-55234924 | Msa0776720:intron | 35.0% | |
| GATAGACATGACCATATTGT+TGG | - | chr5_2:55234919-55234938 | None:intergenic | 35.0% | |
| ! | CTTGCTACATGTCTTGTTAT+TGG | + | chr5_2:55234979-55234998 | Msa0776720:intron | 35.0% |
| !! | ATGTCTTGTTATTGGTCAAG+TGG | + | chr5_2:55234987-55235006 | Msa0776720:intron | 35.0% |
| CAATATCACAACATGTAGGT+AGG | - | chr5_2:55235100-55235119 | None:intergenic | 35.0% | |
| !! | TTTGGATCGAACTTGTTGTT+TGG | - | chr5_2:55235184-55235203 | None:intergenic | 35.0% |
| GAAAATTCAAACAGATAGGC+AGG | - | chr5_2:55235219-55235238 | None:intergenic | 35.0% | |
| TGACTGGAACATAGACATAT+AGG | - | chr5_2:55235283-55235302 | None:intergenic | 35.0% | |
| GATCATGGAATACAAACAGA+GGG | - | chr5_2:55235402-55235421 | None:intergenic | 35.0% | |
| TGATCATGGAATACAAACAG+AGG | - | chr5_2:55235403-55235422 | None:intergenic | 35.0% | |
| GTTTGTATTCCATGATCAAG+TGG | + | chr5_2:55235405-55235424 | Msa0776720:intron | 35.0% | |
| GATTTAGGTAGACATTGACA+GGG | - | chr5_2:55235485-55235504 | None:intergenic | 35.0% | |
| ATGAATGCAAGACAAACAAC+TGG | - | chr5_2:55235536-55235555 | None:intergenic | 35.0% | |
| ! | TTTAAGTTTCTTTGTCCGGA+GGG | - | chr5_2:55235684-55235703 | None:intergenic | 35.0% |
| ! | ATTTAAGTTTCTTTGTCCGG+AGG | - | chr5_2:55235685-55235704 | None:intergenic | 35.0% |
| CCGGACAAAGAAACTTAAAT+AGG | + | chr5_2:55235685-55235704 | Msa0776720:intron | 35.0% | |
| ! | CAGCTGTTATACCCTAATTT+TGG | + | chr5_2:55235710-55235729 | Msa0776720:intron | 35.0% |
| AGGGTTTATTCAAGCCAAAT+TGG | - | chr5_2:55236107-55236126 | None:intergenic | 35.0% | |
| TTAACAGGGGATTAAAGCAA+GGG | - | chr5_2:55236126-55236145 | None:intergenic | 35.0% | |
| TTTAACAGGGGATTAAAGCA+AGG | - | chr5_2:55236127-55236146 | None:intergenic | 35.0% | |
| !! | CACAAAATTTTGACAGAGAG+AGG | + | chr5_2:55236216-55236235 | Msa0776720:intron | 35.0% |
| !!! | ACTTCTTGATCTGTTTTTGG+TGG | - | chr5_2:55236573-55236592 | None:intergenic | 35.0% |
| !! | GATTTTGTTGGATTAGGGTT+TGG | - | chr5_2:55236629-55236648 | None:intergenic | 35.0% |
| !! | TGCGTGTTTGATGATGAATT+TGG | - | chr5_2:55236714-55236733 | None:intergenic | 35.0% |
| ! | TCGGTTTGTATTGTTGCTAT+TGG | - | chr5_2:55236762-55236781 | None:intergenic | 35.0% |
| TCTGCTTTCTATGAGTTTGT+TGG | - | chr5_2:55236951-55236970 | None:intergenic | 35.0% | |
| ! | CGAAGCAGATCTAATAGTTT+TGG | - | chr5_2:55237137-55237156 | None:intergenic | 35.0% |
| CAAAGTACGAAATCGAAAAG+AGG | + | chr5_2:55237179-55237198 | Msa0776720:intron | 35.0% | |
| ! | GTTTTTAAATCGGAGCAGAT+TGG | + | chr5_2:55237230-55237249 | Msa0776720:intron | 35.0% |
| ATCACAAACGCACTAGAAAA+GGG | - | chr5_2:55237518-55237537 | None:intergenic | 35.0% | |
| AAGAAATTTAGGCAAAGCAG+GGG | - | chr5_2:55237558-55237577 | None:intergenic | 35.0% | |
| TTTAGTGTATGCTTGTGAGT+TGG | + | chr5_2:55237913-55237932 | Msa0776720:intron | 35.0% | |
| TTAGTGTATGCTTGTGAGTT+GGG | + | chr5_2:55237914-55237933 | Msa0776720:intron | 35.0% | |
| !! | GGGATTGATTTGTCACTATT+TGG | + | chr5_2:55237949-55237968 | Msa0776720:intron | 35.0% |
| TTGCTGTATGTGAATATGTG+TGG | + | chr5_2:55237981-55238000 | Msa0776720:intron | 35.0% | |
| ! | GGTTAATTGCTCGTTTTACA+AGG | + | chr5_2:55238002-55238021 | Msa0776720:intron | 35.0% |
| TGTCATGATGTGAGGATTAT+AGG | + | chr5_2:55238146-55238165 | Msa0776720:intron | 35.0% | |
| !!! | AGGGGAATTTTGCTACTTTT+AGG | + | chr5_2:55238202-55238221 | Msa0776720:intron | 35.0% |
| GTAAAGTGGTTAGTAGCATA+AGG | - | chr5_2:55238296-55238315 | None:intergenic | 35.0% | |
| AGGCTAAGAATATAAGATGG+AGG | - | chr5_2:55238351-55238370 | None:intergenic | 35.0% | |
| TCTTCCTTCAACTATCTCTT+TGG | + | chr5_2:55238657-55238676 | Msa0776720:CDS | 35.0% | |
| GTAAAGAGTTATCACCAACA+TGG | - | chr5_2:55238691-55238710 | None:intergenic | 35.0% | |
| !!! | TGTTAGTTTTATTTGCCGCA+AGG | + | chr5_2:55238736-55238755 | Msa0776720:CDS | 35.0% |
| !! | TTTTATTTGCCGCAAGGATA+TGG | + | chr5_2:55238742-55238761 | Msa0776720:CDS | 35.0% |
| CTATTGAAGGAAAGGATGAA+CGG | - | chr5_2:55239064-55239083 | None:intergenic | 35.0% | |
| TCTAGCATCTATTGAAGGAA+AGG | - | chr5_2:55239072-55239091 | None:intergenic | 35.0% | |
| ATTCCAAGATGGAAATTCAG+TGG | + | chr5_2:55239112-55239131 | Msa0776720:CDS | 35.0% | |
| CAACTGGCTAGTACTAATAT+TGG | + | chr5_2:55239155-55239174 | Msa0776720:CDS | 35.0% | |
| ! | CATTGTTCCTCGGAAATTTT+TGG | - | chr5_2:55239239-55239258 | None:intergenic | 35.0% |
| CAAAAATTTCCGAGGAACAA+TGG | + | chr5_2:55239237-55239256 | Msa0776720:CDS | 35.0% | |
| GCTAAAATTAAGGATTTCCG+AGG | + | chr5_2:55239266-55239285 | Msa0776720:CDS | 35.0% | |
| ! | CTTTTCCAAGTTAAATACCG+AGG | + | chr5_2:55239356-55239375 | Msa0776720:intron | 35.0% |
| ! | TAATGACAACATGTTTTCCG+AGG | - | chr5_2:55239390-55239409 | None:intergenic | 35.0% |
| GAAGGAAAATTGACAGAGTT+TGG | - | chr5_2:55239579-55239598 | None:intergenic | 35.0% | |
| ! | ATTCGGTGAGAGTTATTCAA+CGG | - | chr5_2:55239605-55239624 | None:intergenic | 35.0% |
| ! | CTGTTTGCATCTTCTGTTTT+TGG | + | chr5_2:55239693-55239712 | Msa0776720:intron | 35.0% |
| AAAAGCAACACAGAACTACA+TGG | - | chr5_2:55239787-55239806 | None:intergenic | 35.0% | |
| !!! | TGTAGTTCTGTGTTGCTTTT+TGG | + | chr5_2:55239787-55239806 | Msa0776720:CDS | 35.0% |
| TACTGGATTTCCAAATTGGT+TGG | + | chr5_2:55239967-55239986 | Msa0776720:intron | 35.0% | |
| TCTTAGGGATTCATGTTCAT+TGG | + | chr5_2:55240165-55240184 | Msa0776720:CDS | 35.0% | |
| GAAAGCAAACCTGAGCAATA+AGG | + | chr5_2:55233959-55233978 | Msa0776720:intron | 40.0% | |
| TGGAATGTACCTTATTGCTC+AGG | - | chr5_2:55233971-55233990 | None:intergenic | 40.0% | |
| TTCCAATACGTGTTACAAGC+AGG | + | chr5_2:55234027-55234046 | Msa0776720:intron | 40.0% | |
| ! | TGCTAAGTTGAAAACCCGAA+AGG | + | chr5_2:55234131-55234150 | Msa0776720:intron | 40.0% |
| ! | GCTAAGTTGAAAACCCGAAA+GGG | + | chr5_2:55234132-55234151 | Msa0776720:intron | 40.0% |
| TTCATAGGTTGTCAATCAGC+GGG | - | chr5_2:55234180-55234199 | None:intergenic | 40.0% | |
| CTTCATAGGTTGTCAATCAG+CGG | - | chr5_2:55234181-55234200 | None:intergenic | 40.0% | |
| ACAACCTATGAAGGCAATTC+AGG | + | chr5_2:55234188-55234207 | Msa0776720:intron | 40.0% | |
| TTTGCCTGAATTGCCTTCAT+AGG | - | chr5_2:55234195-55234214 | None:intergenic | 40.0% | |
| GAAGGCAATTCAGGCAAAAA+TGG | + | chr5_2:55234197-55234216 | Msa0776720:intron | 40.0% | |
| AGGCAATTCAGGCAAAAATG+GGG | + | chr5_2:55234199-55234218 | Msa0776720:intron | 40.0% | |
| CTTGGAAGATTCTTGGATAC+AGG | - | chr5_2:55234389-55234408 | None:intergenic | 40.0% | |
| CTGTATCCAAGAATCTTCCA+AGG | + | chr5_2:55234387-55234406 | Msa0776720:CDS | 40.0% | |
| GGCAATAAAACTTGTAGAGG+AGG | - | chr5_2:55234415-55234434 | None:intergenic | 40.0% | |
| GAGGGCAATAAAACTTGTAG+AGG | - | chr5_2:55234418-55234437 | None:intergenic | 40.0% | |
| GGGAATGCAACATGTATGTA+TGG | - | chr5_2:55234658-55234677 | None:intergenic | 40.0% | |
| TGGCCCAGATTAAATTGAGA+GGG | - | chr5_2:55234899-55234918 | None:intergenic | 40.0% | |
| TTGGCCCAGATTAAATTGAG+AGG | - | chr5_2:55234900-55234919 | None:intergenic | 40.0% | |
| AGTAGGTACAAGCTGTTCTT+TGG | - | chr5_2:55235023-55235042 | None:intergenic | 40.0% | |
| GGAAGATACAAGCTGTTCTT+TGG | - | chr5_2:55235262-55235281 | None:intergenic | 40.0% | |
| GATAGGTACAAGCTGTTCTT+TGG | - | chr5_2:55235441-55235460 | None:intergenic | 40.0% | |
| GGATTTAGGTAGACATTGAC+AGG | - | chr5_2:55235486-55235505 | None:intergenic | 40.0% | |
| TGTCATATCACTGGGGATTT+AGG | - | chr5_2:55235500-55235519 | None:intergenic | 40.0% | |
| ACAGAGCATGTCATATCACT+GGG | - | chr5_2:55235508-55235527 | None:intergenic | 40.0% | |
| TACAGAGCATGTCATATCAC+TGG | - | chr5_2:55235509-55235528 | None:intergenic | 40.0% | |
| GACGAAGTCTTTGATTCAAC+GGG | - | chr5_2:55235655-55235674 | None:intergenic | 40.0% | |
| GGACGAAGTCTTTGATTCAA+CGG | - | chr5_2:55235656-55235675 | None:intergenic | 40.0% | |
| AAATGGCTAAAATGCCCCTA+GGG | - | chr5_2:55236035-55236054 | None:intergenic | 40.0% | |
| GTCTCTGAGTCTTTCCAATT+TGG | + | chr5_2:55236090-55236109 | Msa0776720:intron | 40.0% | |
| !! | TTCGAGTCATTTTAGTCCCT+AGG | + | chr5_2:55236175-55236194 | Msa0776720:intron | 40.0% |
| !! | TCGAGTCATTTTAGTCCCTA+GGG | + | chr5_2:55236176-55236195 | Msa0776720:intron | 40.0% |
| AAATGACCAAAATGCCCCTA+GGG | - | chr5_2:55236194-55236213 | None:intergenic | 40.0% | |
| TAGGTGATGACTATGATAGC+TGG | - | chr5_2:55236469-55236488 | None:intergenic | 40.0% | |
| ! | GACTGTGACTGGACTTTTAT+AGG | - | chr5_2:55236488-55236507 | None:intergenic | 40.0% |
| AAAAGTCCAGTCACAGTCAA+TGG | + | chr5_2:55236490-55236509 | Msa0776720:intron | 40.0% | |
| !! | TGGTGATGATGATTCGGTTA+TGG | - | chr5_2:55236609-55236628 | None:intergenic | 40.0% |
| !! | AGGGTTTGGTGATGATGATT+CGG | - | chr5_2:55236615-55236634 | None:intergenic | 40.0% |
| AAACCGATCCAACAAACTCA+TGG | + | chr5_2:55236775-55236794 | Msa0776720:intron | 40.0% | |
| !! | TCACCATGAGTTTGTTGGAT+CGG | - | chr5_2:55236781-55236800 | None:intergenic | 40.0% |
| GAGAATCACCATGAGTTTGT+TGG | - | chr5_2:55236786-55236805 | None:intergenic | 40.0% | |
| CGAAATGCAGAGAAAAGGAA+CGG | - | chr5_2:55237096-55237115 | None:intergenic | 40.0% | |
| GGAAACGAAATGCAGAGAAA+AGG | - | chr5_2:55237101-55237120 | None:intergenic | 40.0% | |
| !!! | AGTTTTGGATTCGGCGAAAA+CGG | - | chr5_2:55237122-55237141 | None:intergenic | 40.0% |
| AAAACTCTCTCTCTCTCTCT+AGG | + | chr5_2:55237351-55237370 | Msa0776720:intron | 40.0% | |
| ! | GGCCTTATATAGCCAATGAA+CGG | + | chr5_2:55237426-55237445 | Msa0776720:intron | 40.0% |
| ! | GACCGTTCATTGGCTATATA+AGG | - | chr5_2:55237431-55237450 | None:intergenic | 40.0% |
| TCACAAACGCACTAGAAAAG+GGG | - | chr5_2:55237517-55237536 | None:intergenic | 40.0% | |
| CATCACAAACGCACTAGAAA+AGG | - | chr5_2:55237519-55237538 | None:intergenic | 40.0% | |
| GATGGAGGATGAGATGATTA+TGG | - | chr5_2:55238336-55238355 | None:intergenic | 40.0% | |
| GAGACTAACCTCTTCTACTT+AGG | - | chr5_2:55238483-55238502 | None:intergenic | 40.0% | |
| GCATCATCCATCTCCAAATT+TGG | - | chr5_2:55238569-55238588 | None:intergenic | 40.0% | |
| TCCTTCAACTATCTCTTTGG+AGG | + | chr5_2:55238660-55238679 | Msa0776720:CDS | 40.0% | |
| TCCTCCAAAGAGATAGTTGA+AGG | - | chr5_2:55238664-55238683 | None:intergenic | 40.0% | |
| ! | TCAACTATCTCTTTGGAGGA+TGG | + | chr5_2:55238664-55238683 | Msa0776720:CDS | 40.0% |
| TCAAGGAACGAAACTCAATG+TGG | + | chr5_2:55238924-55238943 | Msa0776720:CDS | 40.0% | |
| GAACCACTGAATTTCCATCT+TGG | - | chr5_2:55239118-55239137 | None:intergenic | 40.0% | |
| ATTCCGACCAAAAATTTCCG+AGG | + | chr5_2:55239229-55239248 | Msa0776720:CDS | 40.0% | |
| !!! | GTTCCTCGGAAATTTTTGGT+CGG | - | chr5_2:55239235-55239254 | None:intergenic | 40.0% |
| !! | TTTCCGAGGAACTTTTTCCT+CGG | + | chr5_2:55239280-55239299 | Msa0776720:CDS | 40.0% |
| ATACCGAGGAAAAAGTTCCT+CGG | - | chr5_2:55239286-55239305 | None:intergenic | 40.0% | |
| ATTCTGACATGTACATACCG+AGG | - | chr5_2:55239300-55239319 | None:intergenic | 40.0% | |
| ATACCGAGGAAAATGTTCCT+CGG | + | chr5_2:55239370-55239389 | Msa0776720:intron | 40.0% | |
| ! | TTTCCGAGGAACATTTTCCT+CGG | - | chr5_2:55239376-55239395 | None:intergenic | 40.0% |
| AGAGTTATTCAACGGTGAGA+AGG | - | chr5_2:55239597-55239616 | None:intergenic | 40.0% | |
| !!! | TGCATCTTCTGTTTTTGGTC+TGG | + | chr5_2:55239698-55239717 | Msa0776720:intron | 40.0% |
| !!! | ATCACCTGTTTTTGCTGTTG+CGG | + | chr5_2:55239810-55239829 | Msa0776720:CDS | 40.0% |
| !!! | TGTTTTTGCTGTTGCGGTTT+GGG | + | chr5_2:55239816-55239835 | Msa0776720:intron | 40.0% |
| AAACCTCCTAATTGAGCCAT+GGG | - | chr5_2:55239883-55239902 | None:intergenic | 40.0% | |
| AAAACCTCCTAATTGAGCCA+TGG | - | chr5_2:55239884-55239903 | None:intergenic | 40.0% | |
| AACAACATCACCGTAAAGCA+AGG | - | chr5_2:55240046-55240065 | None:intergenic | 40.0% | |
| GAAGAAATTGACAGCTGTGT+TGG | + | chr5_2:55240187-55240206 | Msa0776720:CDS | 40.0% | |
| ! | TTTTGTCTGGATCGCCCTTT+CGG | - | chr5_2:55233454-55233473 | None:intergenic | 45.0% |
| GGCGATCCAGACAAAAGTTA+GGG | + | chr5_2:55233458-55233477 | Msa0776720:CDS | 45.0% | |
| ! | TTTTGCATGAACCGCCCTTT+CGG | - | chr5_2:55233563-55233582 | None:intergenic | 45.0% |
| ! | TTCCAAGCTTTGTAAGTCCG+TGG | + | chr5_2:55233760-55233779 | Msa0776720:intron | 45.0% |
| CACCTGCTTGTAACACGTAT+TGG | - | chr5_2:55234032-55234051 | None:intergenic | 45.0% | |
| ATTGACCACAGATCATCCTG+GGG | - | chr5_2:55234057-55234076 | None:intergenic | 45.0% | |
| CATTGACCACAGATCATCCT+GGG | - | chr5_2:55234058-55234077 | None:intergenic | 45.0% | |
| AAGTTGAAAACCCGAAAGGG+CGG | + | chr5_2:55234135-55234154 | Msa0776720:intron | 45.0% | |
| TCATAGGTTGTCAATCAGCG+GGG | - | chr5_2:55234179-55234198 | None:intergenic | 45.0% | |
| ! | CGCTGATTGACAACCTATGA+AGG | + | chr5_2:55234179-55234198 | Msa0776720:intron | 45.0% |
| !!! | TTTCGGGTTTTCGATTCACC+GGG | - | chr5_2:55234243-55234262 | None:intergenic | 45.0% |
| !!! | CTTTCGGGTTTTCGATTCAC+CGG | - | chr5_2:55234244-55234263 | None:intergenic | 45.0% |
| GGTGAATCGAAAACCCGAAA+GGG | + | chr5_2:55234243-55234262 | Msa0776720:intron | 45.0% | |
| ACATTGGATGTTCGCATCTG+TGG | - | chr5_2:55234333-55234352 | None:intergenic | 45.0% | |
| ! | GTCAGTGCTGGGTAAAACAT+TGG | - | chr5_2:55234349-55234368 | None:intergenic | 45.0% |
| !!! | AGTTTTATTGCCCTCAGCCA+TGG | + | chr5_2:55234423-55234442 | Msa0776720:CDS | 45.0% |
| CGTATCAAAACCATGGCTGA+GGG | - | chr5_2:55234436-55234455 | None:intergenic | 45.0% | |
| ACGTATCAAAACCATGGCTG+AGG | - | chr5_2:55234437-55234456 | None:intergenic | 45.0% | |
| GGTAGGTGCAAACTGTTCTT+TGG | - | chr5_2:55235083-55235102 | None:intergenic | 45.0% | |
| ! | AGCCTTTTGTCTATGTCTCC+AGG | + | chr5_2:55235158-55235177 | Msa0776720:intron | 45.0% |
| !! | ATCGAACTTGTTGTTTGGCC+TGG | - | chr5_2:55235179-55235198 | None:intergenic | 45.0% |
| GGCAGGTACAAACTGTTCTT+TGG | - | chr5_2:55235202-55235221 | None:intergenic | 45.0% | |
| ! | GATCGAACTTGTCACTTGAC+TGG | - | chr5_2:55235299-55235318 | None:intergenic | 45.0% |
| GACAGGTTCAAGCTGTTCTT+TGG | - | chr5_2:55235321-55235340 | None:intergenic | 45.0% | |
| TGACTGGGGAATAGAAACAC+AGG | - | chr5_2:55235343-55235362 | None:intergenic | 45.0% | |
| !! | ATCGAACTTGCTGCTTGACT+GGG | - | chr5_2:55235358-55235377 | None:intergenic | 45.0% |
| GGTGAGTACAAGCTGTTCTT+TGG | - | chr5_2:55235381-55235400 | None:intergenic | 45.0% | |
| ! | TGTACCTATCTTTTGTCCCC+TGG | + | chr5_2:55235451-55235470 | Msa0776720:intron | 45.0% |
| CAAACCAGGGGACAAAAGAT+AGG | - | chr5_2:55235458-55235477 | None:intergenic | 45.0% | |
| TTGACAGGGTAGACAAACCA+GGG | - | chr5_2:55235471-55235490 | None:intergenic | 45.0% | |
| ATTGACAGGGTAGACAAACC+AGG | - | chr5_2:55235472-55235491 | None:intergenic | 45.0% | |
| CAGAGCATGTCATATCACTG+GGG | - | chr5_2:55235507-55235526 | None:intergenic | 45.0% | |
| TTTGAGTCAGTTTAGCCCCT+AGG | + | chr5_2:55236016-55236035 | Msa0776720:intron | 45.0% | |
| TTGAGTCAGTTTAGCCCCTA+GGG | + | chr5_2:55236017-55236036 | Msa0776720:intron | 45.0% | |
| AATGGCTAAAATGCCCCTAG+GGG | - | chr5_2:55236034-55236053 | None:intergenic | 45.0% | |
| GAAATGGCTAAAATGCCCCT+AGG | - | chr5_2:55236036-55236055 | None:intergenic | 45.0% | |
| !! | CGAGTCATTTTAGTCCCTAG+GGG | + | chr5_2:55236177-55236196 | Msa0776720:intron | 45.0% |
| !!! | TTTAGTCCCTAGGGGCATTT+TGG | + | chr5_2:55236185-55236204 | Msa0776720:intron | 45.0% |
| GAAATGACCAAAATGCCCCT+AGG | - | chr5_2:55236195-55236214 | None:intergenic | 45.0% | |
| CTATGATAGCTGGACCAATG+AGG | - | chr5_2:55236459-55236478 | None:intergenic | 45.0% | |
| ! | CTTTGACCATTGACTGTGAC+TGG | - | chr5_2:55236499-55236518 | None:intergenic | 45.0% |
| GCACTTGAATTGCGAAGTAG+AGG | - | chr5_2:55236841-55236860 | None:intergenic | 45.0% | |
| GCTTGAGACAGAGAAGAAGA+AGG | + | chr5_2:55236902-55236921 | Msa0776720:intron | 45.0% | |
| ! | GGAGATGATGATGAAGCTAC+GGG | - | chr5_2:55237051-55237070 | None:intergenic | 45.0% |
| ! | CGGAGATGATGATGAAGCTA+CGG | - | chr5_2:55237052-55237071 | None:intergenic | 45.0% |
| ! | ATCATCTCCGATTCGAGCTA+AGG | + | chr5_2:55237062-55237081 | Msa0776720:CDS | 45.0% |
| GAGGTTACCTTAGCTCGAAT+CGG | - | chr5_2:55237072-55237091 | None:intergenic | 45.0% | |
| GGTTTCGTTGTAGTGAGAGA+AGG | + | chr5_2:55237372-55237391 | Msa0776720:intron | 45.0% | |
| GTTGTAGTGAGAGAAGGAGA+GGG | + | chr5_2:55237378-55237397 | Msa0776720:intron | 45.0% | |
| CACAAACGCACTAGAAAAGG+GGG | - | chr5_2:55237516-55237535 | None:intergenic | 45.0% | |
| ! | TGAGTTGGGATGTGTGGATT+GGG | + | chr5_2:55237928-55237947 | Msa0776720:intron | 45.0% |
| ! | CCAAAGGTGTGGAGATTTGT+GGG | + | chr5_2:55238591-55238610 | Msa0776720:CDS | 45.0% |
| ! | TGAGTGTTGCCATATCCTTG+CGG | - | chr5_2:55238754-55238773 | None:intergenic | 45.0% |
| GGCAACACTCAAGAAGTCAT+TGG | + | chr5_2:55238763-55238782 | Msa0776720:CDS | 45.0% | |
| TGCATAATACGCCAGATGCA+TGG | + | chr5_2:55238856-55238875 | Msa0776720:CDS | 45.0% | |
| GAAATGAGACTCCATGCATC+TGG | - | chr5_2:55238870-55238889 | None:intergenic | 45.0% | |
| ! | CAGTGCTCTGAATTCCAAGA+TGG | + | chr5_2:55239101-55239120 | Msa0776720:CDS | 45.0% |
| AGCGAGAAACCATTGTTCCT+CGG | - | chr5_2:55239249-55239268 | None:intergenic | 45.0% | |
| !!! | TCTTCTGTTTTTGGTCTGGC+AGG | + | chr5_2:55239702-55239721 | Msa0776720:intron | 45.0% |
| ! | CACAGCACTGAACAGCTTAA+AGG | - | chr5_2:55239730-55239749 | None:intergenic | 45.0% |
| CAAACCGCAACAGCAAAAAC+AGG | - | chr5_2:55239817-55239836 | None:intergenic | 45.0% | |
| !!! | CTGTTTTTGCTGTTGCGGTT+TGG | + | chr5_2:55239815-55239834 | Msa0776720:intron | 45.0% |
| !!! | GTTTTTGCTGTTGCGGTTTG+GGG | + | chr5_2:55239817-55239836 | Msa0776720:intron | 45.0% |
| !!! | GGTTTGGGGAGGGTTTTTTT+GGG | + | chr5_2:55239831-55239850 | Msa0776720:intron | 45.0% |
| CTGATATGAGCTCTTTCCCA+TGG | + | chr5_2:55239864-55239883 | Msa0776720:intron | 45.0% | |
| CTCTTTCCCATGGCTCAATT+AGG | + | chr5_2:55239874-55239893 | Msa0776720:intron | 45.0% | |
| TTTCCCATGGCTCAATTAGG+AGG | + | chr5_2:55239877-55239896 | Msa0776720:intron | 45.0% | |
| GGGTTTCTTGCCAACCAATT+TGG | - | chr5_2:55239980-55239999 | None:intergenic | 45.0% | |
| GAAATTGACAGCTGTGTTGG+AGG | + | chr5_2:55240190-55240209 | Msa0776720:CDS | 45.0% | |
| !! | AAATGTAATTAAAATAAAAT+TGG | - | chr5_2:55236342-55236361 | None:intergenic | 5.0% |
| !!! | TTTCGGGTTTTCGATCCACC+GGG | - | chr5_2:55233437-55233456 | None:intergenic | 50.0% |
| !!! | CTTTCGGGTTTTCGATCCAC+CGG | - | chr5_2:55233438-55233457 | None:intergenic | 50.0% |
| GGTGGATCGAAAACCCGAAA+GGG | + | chr5_2:55233437-55233456 | Msa0776720:CDS | 50.0% | |
| TTTGTCTGGATCGCCCTTTC+GGG | - | chr5_2:55233453-55233472 | None:intergenic | 50.0% | |
| GGGCGATCCAGACAAAAGTT+AGG | + | chr5_2:55233457-55233476 | Msa0776720:CDS | 50.0% | |
| GCTGAGATTGTACGCAACTC+AGG | + | chr5_2:55233507-55233526 | Msa0776720:CDS | 50.0% | |
| GATGAGCCGAAAACCCGAAA+GGG | + | chr5_2:55233546-55233565 | Msa0776720:CDS | 50.0% | |
| TTTGCATGAACCGCCCTTTC+GGG | - | chr5_2:55233562-55233581 | None:intergenic | 50.0% | |
| CTCCACGGACTTACAAAGCT+TGG | - | chr5_2:55233765-55233784 | None:intergenic | 50.0% | |
| AGTCCGTGGAGTTATGCCTT+TGG | + | chr5_2:55233774-55233793 | Msa0776720:intron | 50.0% | |
| ! | CAGCCAAAGGCATAACTCCA+CGG | - | chr5_2:55233780-55233799 | None:intergenic | 50.0% |
| GAAGAGTGAGAGTCAGCCAA+AGG | - | chr5_2:55233793-55233812 | None:intergenic | 50.0% | |
| CCATTGACCACAGATCATCC+TGG | - | chr5_2:55234059-55234078 | None:intergenic | 50.0% | |
| CCAGGATGATCTGTGGTCAA+TGG | + | chr5_2:55234056-55234075 | Msa0776720:intron | 50.0% | |
| ! | TTTTGCCTAAGCCGCCCTTT+CGG | - | chr5_2:55234149-55234168 | None:intergenic | 50.0% |
| CGGTGAATCGAAAACCCGAA+AGG | + | chr5_2:55234242-55234261 | Msa0776720:intron | 50.0% | |
| GAATCGAAAACCCGAAAGGG+CGG | + | chr5_2:55234246-55234265 | Msa0776720:intron | 50.0% | |
| ! | TTTTGCCTGAACCGCCCTTT+CGG | - | chr5_2:55234260-55234279 | None:intergenic | 50.0% |
| AAGGGCGGTTCAGGCAAAAA+TGG | + | chr5_2:55234261-55234280 | Msa0776720:intron | 50.0% | |
| AGGGCGGTTCAGGCAAAAAT+GGG | + | chr5_2:55234262-55234281 | Msa0776720:intron | 50.0% | |
| TTGTTAGGCGTGTCAGTGCT+GGG | - | chr5_2:55234360-55234379 | None:intergenic | 50.0% | |
| !! | AGCACTGACACGCCTAACAA+CGG | + | chr5_2:55234360-55234379 | Msa0776720:intron | 50.0% |
| GAGGACCCTTGGAAGATTCT+TGG | - | chr5_2:55234396-55234415 | None:intergenic | 50.0% | |
| AACTTGTAGAGGAGGACCCT+TGG | - | chr5_2:55234407-55234426 | None:intergenic | 50.0% | |
| TAACGACGGTCTCTCCAAAG+AGG | + | chr5_2:55234461-55234480 | Msa0776720:CDS | 50.0% | |
| TCGAAAGATTGGGCACGTAG+TGG | - | chr5_2:55234516-55234535 | None:intergenic | 50.0% | |
| GGCTGACACAAGCTGTTCTT+TGG | - | chr5_2:55235142-55235161 | None:intergenic | 50.0% | |
| GGCCTGGAGACATAGACAAA+AGG | - | chr5_2:55235163-55235182 | None:intergenic | 50.0% | |
| GGGGAATAGAAACACAGGAC+AGG | - | chr5_2:55235338-55235357 | None:intergenic | 50.0% | |
| !! | TCGAACTTGCTGCTTGACTG+GGG | - | chr5_2:55235357-55235376 | None:intergenic | 50.0% |
| !! | GATCGAACTTGCTGCTTGAC+TGG | - | chr5_2:55235359-55235378 | None:intergenic | 50.0% |
| TCGAACTCGCCACTTGATCA+TGG | - | chr5_2:55235417-55235436 | None:intergenic | 50.0% | |
| TGACAGGGTAGACAAACCAG+GGG | - | chr5_2:55235470-55235489 | None:intergenic | 50.0% | |
| TTCTTTGTCCGGAGGGTCAA+GGG | - | chr5_2:55235677-55235696 | None:intergenic | 50.0% | |
| TTTCTTTGTCCGGAGGGTCA+AGG | - | chr5_2:55235678-55235697 | None:intergenic | 50.0% | |
| TGAGTCAGTTTAGCCCCTAG+GGG | + | chr5_2:55236018-55236037 | Msa0776720:intron | 50.0% | |
| AGTTACAAGTCCAGTCCACG+TGG | + | chr5_2:55236428-55236447 | Msa0776720:intron | 50.0% | |
| TCCACGTGGCATTTCCTCAT+TGG | + | chr5_2:55236442-55236461 | Msa0776720:intron | 50.0% | |
| ACCAATGAGGAAATGCCACG+TGG | - | chr5_2:55236446-55236465 | None:intergenic | 50.0% | |
| TCGTGTGGATTCGTCACTTG+TGG | - | chr5_2:55236871-55236890 | None:intergenic | 50.0% | |
| ! | AAGCTTGCTTCGTGATCGTG+TGG | - | chr5_2:55236886-55236905 | None:intergenic | 50.0% |
| TGCAGAGAAAAGGAACGGTG+AGG | - | chr5_2:55237091-55237110 | None:intergenic | 50.0% | |
| GGAGAAGGGAAGAAGATGAC+CGG | + | chr5_2:55237290-55237309 | Msa0776720:CDS | 50.0% | |
| GAAGAAGATGACCGGAGCAA+GGG | + | chr5_2:55237298-55237317 | Msa0776720:CDS | 50.0% | |
| CGTTGTAGTGAGAGAAGGAG+AGG | + | chr5_2:55237377-55237396 | Msa0776720:intron | 50.0% | |
| GGTACACAGGTACGCAGAAT+GGG | - | chr5_2:55237479-55237498 | None:intergenic | 50.0% | |
| AGGTACACAGGTACGCAGAA+TGG | - | chr5_2:55237480-55237499 | None:intergenic | 50.0% | |
| ! | TGCTTGTGAGTTGGGATGTG+TGG | + | chr5_2:55237922-55237941 | Msa0776720:intron | 50.0% |
| ! | GTGAGTTGGGATGTGTGGAT+TGG | + | chr5_2:55237927-55237946 | Msa0776720:intron | 50.0% |
| ! | GAGTTGGGATGTGTGGATTG+GGG | + | chr5_2:55237929-55237948 | Msa0776720:intron | 50.0% |
| GAGATGGATGATGCAGCCAA+AGG | + | chr5_2:55238575-55238594 | Msa0776720:intron | 50.0% | |
| ! | GCCAAAGGTGTGGAGATTTG+TGG | + | chr5_2:55238590-55238609 | Msa0776720:intron | 50.0% |
| CCCACAAATCTCCACACCTT+TGG | - | chr5_2:55238594-55238613 | None:intergenic | 50.0% | |
| !! | GGATTTGCTGCTGTTGTTGC+TGG | + | chr5_2:55238612-55238631 | Msa0776720:CDS | 50.0% |
| ! | CTTTGGAGGATGGACCATGT+TGG | + | chr5_2:55238674-55238693 | Msa0776720:CDS | 50.0% |
| ! | ATGTGCGTCCTTTGCTGTCA+CGG | + | chr5_2:55238890-55238909 | Msa0776720:CDS | 50.0% |
| !! | TCACGGCGCTTAGTTTGTCA+AGG | + | chr5_2:55238907-55238926 | Msa0776720:CDS | 50.0% |
| AGAGAGAGTGAGAAGCAGAG+AGG | - | chr5_2:55239513-55239532 | None:intergenic | 50.0% | |
| CTCACTCTCTCTCTCTCAGA+AGG | + | chr5_2:55239521-55239540 | Msa0776720:intron | 50.0% | |
| GGTTACGGTAAGGGAGGATT+CGG | - | chr5_2:55239622-55239641 | None:intergenic | 50.0% | |
| ATGGTTGTGTGACCCAGCTT+CGG | - | chr5_2:55239643-55239662 | None:intergenic | 50.0% | |
| CTATCTGCTGGTCCATGTAG+CGG | + | chr5_2:55239753-55239772 | Msa0776720:CDS | 50.0% | |
| !!! | CGGTTTGGGGAGGGTTTTTT+TGG | + | chr5_2:55239830-55239849 | Msa0776720:intron | 50.0% |
| CGGTGGATCGAAAACCCGAA+AGG | + | chr5_2:55233436-55233455 | Msa0776720:CDS | 55.0% | |
| CGATGAGCCGAAAACCCGAA+AGG | + | chr5_2:55233545-55233564 | Msa0776720:CDS | 55.0% | |
| !!! | GAACCGCCCTTTCGGGTTTT+CGG | - | chr5_2:55233555-55233574 | None:intergenic | 55.0% |
| GCAAACCACCATCACCCCTT+GGG | + | chr5_2:55233618-55233637 | Msa0776720:intron | 55.0% | |
| CAAACCACCATCACCCCTTG+GGG | + | chr5_2:55233619-55233638 | Msa0776720:intron | 55.0% | |
| ACAGTTGCAGATGCCCCAAG+GGG | - | chr5_2:55233635-55233654 | None:intergenic | 55.0% | |
| GACAGTTGCAGATGCCCCAA+GGG | - | chr5_2:55233636-55233655 | None:intergenic | 55.0% | |
| TGACAGTTGCAGATGCCCCA+AGG | - | chr5_2:55233637-55233656 | None:intergenic | 55.0% | |
| GTTACAAGCAGGTGTTCCCC+AGG | + | chr5_2:55234038-55234057 | Msa0776720:intron | 55.0% | |
| GTGTTCCCCAGGATGATCTG+TGG | + | chr5_2:55234049-55234068 | Msa0776720:intron | 55.0% | |
| AAAACCCGAAAGGGCGGCTT+AGG | + | chr5_2:55234141-55234160 | Msa0776720:intron | 55.0% | |
| TTTGCCTAAGCCGCCCTTTC+GGG | - | chr5_2:55234148-55234167 | None:intergenic | 55.0% | |
| AAAACCCGAAAGGGCGGTTC+AGG | + | chr5_2:55233555-55233574 | Msa0776720:CDS | 55.0% | |
| TTTGCCTGAACCGCCCTTTC+GGG | - | chr5_2:55234259-55234278 | None:intergenic | 55.0% | |
| GTTGTTAGGCGTGTCAGTGC+TGG | - | chr5_2:55234361-55234380 | None:intergenic | 55.0% | |
| GGATACAGGTCGCCGTTGTT+AGG | - | chr5_2:55234375-55234394 | None:intergenic | 55.0% | |
| TGAGGAAATGCCACGTGGAC+TGG | - | chr5_2:55236441-55236460 | None:intergenic | 55.0% | |
| TCTTCTTCCCTTCTCCGACG+CGG | - | chr5_2:55237286-55237305 | None:intergenic | 55.0% | |
| GGAAGAAGATGACCGGAGCA+AGG | + | chr5_2:55237297-55237316 | Msa0776720:CDS | 55.0% | |
| TACGCAGAATGGGCCTTAGG+GGG | - | chr5_2:55237469-55237488 | None:intergenic | 55.0% | |
| GTACGCAGAATGGGCCTTAG+GGG | - | chr5_2:55237470-55237489 | None:intergenic | 55.0% | |
| GGTACGCAGAATGGGCCTTA+GGG | - | chr5_2:55237471-55237490 | None:intergenic | 55.0% | |
| AGGTACGCAGAATGGGCCTT+AGG | - | chr5_2:55237472-55237491 | None:intergenic | 55.0% | |
| GGATGATGCAGCCAAAGGTG+TGG | + | chr5_2:55238580-55238599 | Msa0776720:intron | 55.0% | |
| ! | ACTAAGCGCCGTGACAGCAA+AGG | - | chr5_2:55238901-55238920 | None:intergenic | 55.0% |
| CTCACTGAGTTTGCACTGCG+TGG | - | chr5_2:55239331-55239350 | None:intergenic | 55.0% | |
| CACGCAGTGCAAACTCAGTG+AGG | + | chr5_2:55239329-55239348 | Msa0776720:intron | 55.0% | |
| AGCTTCGGTTACGGTAAGGG+AGG | - | chr5_2:55239628-55239647 | None:intergenic | 55.0% | |
| TCCCTTACCGTAACCGAAGC+TGG | + | chr5_2:55239627-55239646 | Msa0776720:intron | 55.0% | |
| CCCAGCTTCGGTTACGGTAA+GGG | - | chr5_2:55239631-55239650 | None:intergenic | 55.0% | |
| CCCTTACCGTAACCGAAGCT+GGG | + | chr5_2:55239628-55239647 | Msa0776720:intron | 55.0% | |
| ACCCAGCTTCGGTTACGGTA+AGG | - | chr5_2:55239632-55239651 | None:intergenic | 55.0% | |
| GTGTGACCCAGCTTCGGTTA+CGG | - | chr5_2:55239637-55239656 | None:intergenic | 55.0% | |
| ! | AGTGCTGTGCTGCTATCTGC+TGG | + | chr5_2:55239741-55239760 | Msa0776720:CDS | 55.0% |
| !! | TTTGCTGTTGCGGTTTGGGG+AGG | + | chr5_2:55239820-55239839 | Msa0776720:intron | 55.0% |
| ! | TTGCTGTTGCGGTTTGGGGA+GGG | + | chr5_2:55239821-55239840 | Msa0776720:intron | 55.0% |
| GAGCCGAAAACCCGAAAGGG+CGG | + | chr5_2:55233549-55233568 | Msa0776720:CDS | 60.0% | |
| GGCAAACCACCATCACCCCT+TGG | + | chr5_2:55233617-55233636 | Msa0776720:intron | 60.0% | |
| GACTTCGTCCCTTGACCCTC+CGG | + | chr5_2:55235666-55235685 | Msa0776720:intron | 60.0% | |
| AGCAGATTGGAGCTCCGACG+CGG | + | chr5_2:55237243-55237262 | Msa0776720:intron | 60.0% | |
| GAAGATGACCGGAGCAAGGG+AGG | + | chr5_2:55237301-55237320 | Msa0776720:CDS | 60.0% | |
| GCCAATGAACGGTCTGACCC+AGG | + | chr5_2:55237437-55237456 | Msa0776720:intron | 60.0% | |
| GCCTGGGTCAGACCGTTCAT+TGG | - | chr5_2:55237441-55237460 | None:intergenic | 60.0% | |
| ! | GCGCGTAGCAAGAGGTACAC+AGG | - | chr5_2:55237492-55237511 | None:intergenic | 60.0% |
| ATGGACCAGCAGCCGCTACA+TGG | - | chr5_2:55239768-55239787 | None:intergenic | 60.0% | |
| ! | GATGCCCCAAGGGGTGATGG+TGG | - | chr5_2:55233626-55233645 | None:intergenic | 65.0% |
| GCAGATGCCCCAAGGGGTGA+TGG | - | chr5_2:55233629-55233648 | None:intergenic | 65.0% | |
| AGATTGGAGCTCCGACGCGG+CGG | + | chr5_2:55237246-55237265 | Msa0776720:intron | 65.0% | |
| TCTTCCCTTCTCCGACGCGG+TGG | - | chr5_2:55237283-55237302 | None:intergenic | 65.0% | |
| CGACGAGACCTCCCTTGCTC+CGG | - | chr5_2:55237312-55237331 | None:intergenic | 65.0% | |
| CGGAGCAAGGGAGGTCTCGT+CGG | + | chr5_2:55237310-55237329 | Msa0776720:intron | 65.0% | |
| GAATGGGCCTTAGGGGGAGC+AGG | - | chr5_2:55237463-55237482 | None:intergenic | 65.0% | |
| ! | AAGGGGGTGCGCGTAGCAAG+AGG | - | chr5_2:55237500-55237519 | None:intergenic | 65.0% |
| CTGGTCCATGTAGCGGCTGC+TGG | + | chr5_2:55239760-55239779 | Msa0776720:CDS | 65.0% | |
| ACCCAGGCCTGCTCCCCCTA+AGG | + | chr5_2:55237453-55237472 | Msa0776720:intron | 70.0% | |
| GCCTTAGGGGGAGCAGGCCT+GGG | - | chr5_2:55237457-55237476 | None:intergenic | 70.0% | |
| TGCACCACCGGCCACCGCGT+CGG | + | chr5_2:55237269-55237288 | Msa0776720:CDS | 75.0% | |
| TTCTCCGACGCGGTGGCCGG+TGG | - | chr5_2:55237276-55237295 | None:intergenic | 75.0% | |
| ACCGGCCACCGCGTCGGAGA+AGG | + | chr5_2:55237275-55237294 | Msa0776720:CDS | 75.0% | |
| CCCTTCTCCGACGCGGTGGC+CGG | - | chr5_2:55237279-55237298 | None:intergenic | 75.0% | |
| CCGGCCACCGCGTCGGAGAA+GGG | + | chr5_2:55237276-55237295 | Msa0776720:CDS | 75.0% | |
| GGCCTTAGGGGGAGCAGGCC+TGG | - | chr5_2:55237458-55237477 | None:intergenic | 75.0% | |
| ! | CCGGTGGTGCACCGCCGCGT+CGG | - | chr5_2:55237260-55237279 | None:intergenic | 80.0% |
| ! | CCGACGCGGCGGTGCACCAC+CGG | + | chr5_2:55237257-55237276 | Msa0776720:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 55233426 | 55240231 | 55233426 | ID=Msa0776720;Name=Msa0776720 |
| chr5_2 | mRNA | 55233426 | 55240231 | 55233426 | ID=Msa0776720-mRNA-1;Parent=Msa0776720;Name=Msa0776720-mRNA-1;_AED=0.76;_eAED=0.86;_QI=0|0|0.11|0.22|1|1|9|14|561 |
| chr5_2 | exon | 55233426 | 55233604 | 55233426 | ID=Msa0776720-mRNA-1:exon:16358;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55234362 | 55234491 | 55234362 | ID=Msa0776720-mRNA-1:exon:16359;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55235180 | 55235404 | 55235180 | ID=Msa0776720-mRNA-1:exon:16360;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55236808 | 55236873 | 55236808 | ID=Msa0776720-mRNA-1:exon:16361;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55236970 | 55237083 | 55236970 | ID=Msa0776720-mRNA-1:exon:16362;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55237248 | 55237322 | 55237248 | ID=Msa0776720-mRNA-1:exon:16363;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55238591 | 55239301 | 55238591 | ID=Msa0776720-mRNA-1:exon:16364;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55239724 | 55239831 | 55239724 | ID=Msa0776720-mRNA-1:exon:16365;Parent=Msa0776720-mRNA-1 |
| chr5_2 | exon | 55240140 | 55240231 | 55240140 | ID=Msa0776720-mRNA-1:exon:16366;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55233426 | 55233604 | 55233426 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55234362 | 55234491 | 55234362 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55235180 | 55235404 | 55235180 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55236808 | 55236873 | 55236808 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55236970 | 55237083 | 55236970 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55237248 | 55237322 | 55237248 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55238591 | 55239301 | 55238591 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55239724 | 55239831 | 55239724 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | CDS | 55240140 | 55240217 | 55240140 | ID=Msa0776720-mRNA-1:cds;Parent=Msa0776720-mRNA-1 |
| chr5_2 | three_prime_UTR | 55240218 | 55240231 | 55240218 | ID=Msa0776720-mRNA-1:three_prime_utr;Parent=Msa0776720-mRNA-1 |
| Gene Sequence |
| Protein sequence |
