Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0736000 | Msa0814940 | 0.802931 | 4.438142e-49 | -8.615850e-47 |
| Msa0777790 | Msa0814940 | 0.807815 | 4.203221e-50 | -8.615850e-47 |
| Msa0777850 | Msa0814940 | 0.829408 | 5.235116e-55 | -8.615850e-47 |
| Msa0814940 | Msa0815080 | 0.818234 | 2.179923e-52 | -8.615850e-47 |
| Msa0814940 | Msa0815140 | 0.832974 | 6.958012e-56 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 174 sgRNAs with CRISPR-Local
Find 347 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACATTCACACATATTAATT+TGG | 0.186941 | 5_3:+47560616 | None:intergenic |
| TGCACTGGCTTCACCTTTGC+TGG | 0.195790 | 5_3:+47561876 | None:intergenic |
| CCATGCATGGGATTGATTTC+AGG | 0.196515 | 5_3:+47563036 | None:intergenic |
| ATGCTGATATCAAACTTATA+TGG | 0.207233 | 5_3:-47562664 | Msa0814940:three_prime_UTR |
| CTCCAGTAAGTTTCAAAATT+AGG | 0.220243 | 5_3:+47561993 | None:intergenic |
| TTAGTCTCCCATCCGGTATT+TGG | 0.236255 | 5_3:+47562359 | None:intergenic |
| GTAAATGTTCGTTCTGTTGA+TGG | 0.259767 | 5_3:-47561084 | Msa0814940:three_prime_UTR |
| TTGGGTGACATTGTGCTATT+TGG | 0.264288 | 5_3:-47562473 | Msa0814940:three_prime_UTR |
| TGCTCAAGTTTATGAAATTC+AGG | 0.269725 | 5_3:-47561151 | Msa0814940:three_prime_UTR |
| TCAAGTTCTATGAAACTAAT+TGG | 0.278948 | 5_3:-47561900 | Msa0814940:three_prime_UTR |
| TGAGCATGATACATATAGTT+TGG | 0.293711 | 5_3:-47562492 | Msa0814940:three_prime_UTR |
| ACGGCGTTTAGGAGGGAAAA+TGG | 0.297803 | 5_3:-47560680 | Msa0814940:three_prime_UTR |
| ATTCTTCCAGTCGTTGAATC+TGG | 0.301086 | 5_3:+47560722 | None:intergenic |
| AGATACTGTCTTTGGATATT+AGG | 0.305787 | 5_3:-47560874 | Msa0814940:three_prime_UTR |
| TCATAAACTTGAGCATTATA+TGG | 0.306286 | 5_3:+47561159 | None:intergenic |
| ATAGCAGACCAATGTGAATT+TGG | 0.307884 | 5_3:-47561639 | Msa0814940:three_prime_UTR |
| AATATCAATCTTCATGCATT+TGG | 0.308115 | 5_3:+47563145 | None:intergenic |
| AGAGAAATTGACCTTGATAA+AGG | 0.311498 | 5_3:+47561325 | None:intergenic |
| GATTTATCTTCAAGCTTGTT+TGG | 0.320794 | 5_3:-47563449 | Msa0814940:three_prime_UTR |
| TATAATAAGCATTTCCTTGA+AGG | 0.323702 | 5_3:-47561465 | Msa0814940:three_prime_UTR |
| TAGATTGAGACTGGAGCTTT+TGG | 0.327496 | 5_3:+47566322 | None:intergenic |
| AGCTTGAAACAGCATCTTCT+TGG | 0.329857 | 5_3:+47562711 | None:intergenic |
| AAGAATACATTTCTCCTTCA+AGG | 0.340320 | 5_3:+47561451 | None:intergenic |
| AATTAATATGTGTGAATGTT+TGG | 0.348012 | 5_3:-47560613 | Msa0814940:intron |
| ATGAAAGAAGACCGACTATC+TGG | 0.353984 | 5_3:+47562776 | None:intergenic |
| CTTGATTTGCTAAAGTCTCT+TGG | 0.368519 | 5_3:-47562143 | Msa0814940:three_prime_UTR |
| TAATCAACAGTGACTCTGTT+TGG | 0.369827 | 5_3:-47560837 | Msa0814940:three_prime_UTR |
| CCTAAACGCCGTTTCTTGAA+TGG | 0.370619 | 5_3:+47560691 | None:intergenic |
| CCATTCAAGAAACGGCGTTT+AGG | 0.370861 | 5_3:-47560691 | Msa0814940:three_prime_UTR |
| TGCTGATATCAAACTTATAT+GGG | 0.374218 | 5_3:-47562663 | Msa0814940:three_prime_UTR |
| TCATTGCTTTCACACACATT+AGG | 0.388248 | 5_3:-47563268 | Msa0814940:three_prime_UTR |
| AACTATTGTATACTTCCTTC+AGG | 0.394701 | 5_3:-47566448 | Msa0814940:CDS |
| TTACAACGAATGTTCGTATT+CGG | 0.395665 | 5_3:-47563064 | Msa0814940:three_prime_UTR |
| TAGCTTTCTTTCGTGACAAC+AGG | 0.396172 | 5_3:+47561486 | None:intergenic |
| CATTCGTTGTAATGTTCATA+AGG | 0.397925 | 5_3:+47563075 | None:intergenic |
| AGTTATTGATGCTAAGAATA+GGG | 0.406528 | 5_3:-47560806 | Msa0814940:three_prime_UTR |
| ATATCTACCGTGAGATCTAA+TGG | 0.406558 | 5_3:-47561030 | Msa0814940:three_prime_UTR |
| GAGCATGATACATATAGTTT+GGG | 0.415662 | 5_3:-47562491 | Msa0814940:three_prime_UTR |
| ACATTCTGGATTTCACATAA+AGG | 0.420838 | 5_3:+47563413 | None:intergenic |
| TGCGAAATTGCAGTATTAGT+TGG | 0.420980 | 5_3:+47562554 | None:intergenic |
| GCTTGAAACAGCATCTTCTT+GGG | 0.426070 | 5_3:+47562712 | None:intergenic |
| TTACGCTTTGTGACAAAGGT+TGG | 0.428393 | 5_3:-47565916 | Msa0814940:exon |
| AGTGAAGAGGATCTTAAAAT+CGG | 0.428586 | 5_3:-47564461 | Msa0814940:three_prime_UTR |
| TAGTTATTGATGCTAAGAAT+AGG | 0.429708 | 5_3:-47560807 | Msa0814940:three_prime_UTR |
| GTTGTCTCTCATCTCCGATT+AGG | 0.431949 | 5_3:+47561769 | None:intergenic |
| AGGTGGCAAGTCGGTTGAAT+AGG | 0.434158 | 5_3:-47562532 | Msa0814940:three_prime_UTR |
| ATCTCTCATTTCACTGGAAA+CGG | 0.434246 | 5_3:-47562186 | Msa0814940:three_prime_UTR |
| GACATAATTAAAACAGTGTT+GGG | 0.434780 | 5_3:-47563014 | Msa0814940:three_prime_UTR |
| CTCCGCCGTTGCATCCTAAT+CGG | 0.435407 | 5_3:-47561783 | Msa0814940:three_prime_UTR |
| CATGCATGGGATTGATTTCA+GGG | 0.439092 | 5_3:+47563037 | None:intergenic |
| CAACCGTATCGCCTATGTTA+AGG | 0.439137 | 5_3:-47563207 | Msa0814940:three_prime_UTR |
| TCGGTTGAATAGGTTAGTTA+TGG | 0.440947 | 5_3:-47562522 | Msa0814940:three_prime_UTR |
| GTTGCTGACTTAAATGTCTC+TGG | 0.443060 | 5_3:+47563521 | None:intergenic |
| GAAGACCGACTATCTGGTTC+AGG | 0.443616 | 5_3:+47562782 | None:intergenic |
| GCCATGGGTAAAGAGCAATT+TGG | 0.444307 | 5_3:-47561408 | Msa0814940:three_prime_UTR |
| GGAAATTATAAACCTGTGTC+AGG | 0.444557 | 5_3:-47563296 | Msa0814940:three_prime_UTR |
| TGGAGCGCAAGTCAATGTTC+TGG | 0.445243 | 5_3:+47562574 | None:intergenic |
| AGGATGGAGAAGACAAGAAA+TGG | 0.448057 | 5_3:-47564485 | Msa0814940:three_prime_UTR |
| GTTTGAAAGGCTTGTAATGT+TGG | 0.453212 | 5_3:-47561607 | Msa0814940:three_prime_UTR |
| TACAGTTCCATCATGTCCTA+TGG | 0.457334 | 5_3:-47563337 | Msa0814940:three_prime_UTR |
| GCACTGGCTTCACCTTTGCT+GGG | 0.460190 | 5_3:+47561877 | None:intergenic |
| ATATGGGGACCACCAGGGAC+AGG | 0.468887 | 5_3:-47562647 | Msa0814940:three_prime_UTR |
| CGGAGACCGGACAGCTGTAA+TGG | 0.478065 | 5_3:+47561801 | None:intergenic |
| GACGATCTCCGGCGCAGTGA+TGG | 0.480828 | 5_3:+47566292 | None:intergenic |
| TTCAAGAAACGGCGTTTAGG+AGG | 0.495052 | 5_3:-47560688 | Msa0814940:three_prime_UTR |
| AACAAATGTGGCTATGACTA+GGG | 0.495248 | 5_3:-47560971 | Msa0814940:three_prime_UTR |
| CTTGAATTTGGCTTGCCCGA+TGG | 0.500757 | 5_3:+47562115 | None:intergenic |
| ATAATTAAAAGCCTTTATCA+AGG | 0.501547 | 5_3:-47561336 | Msa0814940:intron |
| AATGATTGTTTAGCAAAGGA+TGG | 0.505354 | 5_3:-47564501 | Msa0814940:intron |
| TTAACATAGGCGATACGGTT+GGG | 0.506177 | 5_3:+47563209 | None:intergenic |
| GCCAACATCTCTCATTTCAC+TGG | 0.506432 | 5_3:-47562192 | Msa0814940:three_prime_UTR |
| TTGGACGAAGTATGTTTGAA+AGG | 0.506473 | 5_3:-47561620 | Msa0814940:three_prime_UTR |
| CGGCGTTTAGGAGGGAAAAT+GGG | 0.506969 | 5_3:-47560679 | Msa0814940:three_prime_UTR |
| GATAAAGTTGCTCAAGTCCA+TGG | 0.507236 | 5_3:-47562324 | Msa0814940:three_prime_UTR |
| CGCTTTGTGACAAAGGTTGG+AGG | 0.507999 | 5_3:-47565913 | Msa0814940:intron |
| GGACATAATTAAAACAGTGT+TGG | 0.508418 | 5_3:-47563015 | Msa0814940:three_prime_UTR |
| AAATAATTTCTTAGACCTGA+AGG | 0.508536 | 5_3:+47566433 | None:intergenic |
| TTGAGTCACCATTCAAGAAA+CGG | 0.508950 | 5_3:-47560699 | Msa0814940:three_prime_UTR |
| TTTGTTAGCTGATTTCTCCA+TGG | 0.509552 | 5_3:+47562307 | None:intergenic |
| AAGTCTCTTGGAATTTCCAT+CGG | 0.510727 | 5_3:-47562131 | Msa0814940:three_prime_UTR |
| CGTGATTTCCTGCTTAACAT+AGG | 0.510922 | 5_3:+47563178 | None:intergenic |
| GAACAAATGTGGCTATGACT+AGG | 0.512010 | 5_3:-47560972 | Msa0814940:three_prime_UTR |
| AGTAAGTTTCAAAATTAGGA+AGG | 0.513940 | 5_3:+47561997 | None:intergenic |
| ACCGTGAGATCTAATGGTAC+TGG | 0.518270 | 5_3:-47561024 | Msa0814940:three_prime_UTR |
| TTTGAAAGGCTTGTAATGTT+GGG | 0.519751 | 5_3:-47561606 | Msa0814940:three_prime_UTR |
| TCCAGTGAAATGAGAGATGT+TGG | 0.520054 | 5_3:+47562191 | None:intergenic |
| TCCAAATTGCTCTTTACCCA+TGG | 0.522272 | 5_3:+47561407 | None:intergenic |
| CCGACGGTGGAGACGATCTC+CGG | 0.523059 | 5_3:+47566281 | None:intergenic |
| TTGAAACTTACTGGAGAGGT+GGG | 0.523793 | 5_3:-47561986 | Msa0814940:three_prime_UTR |
| CCGTGCAAAGAGTTCTATGA+TGG | 0.524090 | 5_3:-47561525 | Msa0814940:three_prime_UTR |
| AATATTACGCTTTGTGACAA+AGG | 0.525136 | 5_3:-47565920 | Msa0814940:exon |
| TTGTTCTGCCAGTGTTCATG+AGG | 0.529789 | 5_3:-47561215 | Msa0814940:intron |
| CATTTCTACTCTTCAACCAT+AGG | 0.531562 | 5_3:+47563321 | None:intergenic |
| GAATGCTTTGATCCAAATAC+CGG | 0.531724 | 5_3:-47562371 | Msa0814940:three_prime_UTR |
| ACCCTCGAGGATGTTCTAAA+CGG | 0.533004 | 5_3:-47564410 | Msa0814940:three_prime_UTR |
| AGTCTCTTGGAATTTCCATC+GGG | 0.534233 | 5_3:-47562130 | Msa0814940:three_prime_UTR |
| GGAGGCAGCCTATGTTAAGC+AGG | 0.535015 | 5_3:-47563186 | Msa0814940:three_prime_UTR |
| ATGAAATTCAGTTCTCATCA+AGG | 0.535237 | 5_3:-47562437 | Msa0814940:three_prime_UTR |
| TCTTCAACCATAGGACATGA+TGG | 0.535376 | 5_3:+47563330 | None:intergenic |
| AAACTTATATGGGGACCACC+AGG | 0.535882 | 5_3:-47562653 | Msa0814940:three_prime_UTR |
| TCTGTTCCAGATTCAACGAC+TGG | 0.536252 | 5_3:-47560728 | Msa0814940:three_prime_UTR |
| TAGGATGCAACGGCGGAGAC+CGG | 0.537019 | 5_3:+47561788 | None:intergenic |
| ACAGAACATTCTTAATAGCC+CGG | 0.537690 | 5_3:+47560746 | None:intergenic |
| TTTGAAACTTACTGGAGAGG+TGG | 0.538262 | 5_3:-47561987 | Msa0814940:three_prime_UTR |
| AACTAATACTGCAATTTCGC+AGG | 0.541397 | 5_3:-47562552 | Msa0814940:three_prime_UTR |
| TTATAGATATTGTACTCTCA+TGG | 0.541691 | 5_3:-47564433 | Msa0814940:three_prime_UTR |
| TCTAATGGTACTGGTGATGT+TGG | 0.546314 | 5_3:-47561015 | Msa0814940:three_prime_UTR |
| ACAATTCCATTACAGCTGTC+CGG | 0.546872 | 5_3:-47561807 | Msa0814940:three_prime_UTR |
| TATAACAGTTGAAAGTAAGC+AGG | 0.547391 | 5_3:+47562074 | None:intergenic |
| GGCTTGAAGTAGATTGAGAC+TGG | 0.547872 | 5_3:+47566313 | None:intergenic |
| TGGCGGAGAAGCAACAAGCT+AGG | 0.549504 | 5_3:+47566342 | None:intergenic |
| CTATGGTTGAAGAGTAGAAA+TGG | 0.549794 | 5_3:-47563320 | Msa0814940:three_prime_UTR |
| GACAAGAAATGGAAGTGAAG+AGG | 0.549821 | 5_3:-47564474 | Msa0814940:three_prime_UTR |
| TTGTTTCCACAATGCTGAAG+AGG | 0.550324 | 5_3:-47560782 | Msa0814940:three_prime_UTR |
| AGGAAATTGAGCAGTACACT+CGG | 0.550497 | 5_3:-47561128 | Msa0814940:three_prime_UTR |
| ACATATCAACTACTTTCTCT+AGG | 0.550836 | 5_3:-47560648 | Msa0814940:three_prime_UTR |
| CGTGTTTCCTCCAACAATAG+AGG | 0.551045 | 5_3:+47563476 | None:intergenic |
| CGGAAATCTTTACAAAGACA+AGG | 0.553644 | 5_3:-47564390 | Msa0814940:intron |
| CCATCATAGAACTCTTTGCA+CGG | 0.555234 | 5_3:+47561525 | None:intergenic |
| GTGAAGAGGATCTTAAAATC+GGG | 0.557784 | 5_3:-47564460 | Msa0814940:three_prime_UTR |
| AAGTCTGAAGAACATGGTTG+AGG | 0.560607 | 5_3:-47561376 | Msa0814940:three_prime_UTR |
| CCTCCTTAACATAGGCGATA+CGG | 0.560712 | 5_3:+47563204 | None:intergenic |
| AAAGTGAACTTAGTATGCTA+AGG | 0.562963 | 5_3:+47562033 | None:intergenic |
| ACAAAGAAGAAAGTAAGCAT+AGG | 0.565094 | 5_3:-47561192 | Msa0814940:three_prime_UTR |
| TCAAGAAACGGCGTTTAGGA+GGG | 0.570826 | 5_3:-47560687 | Msa0814940:three_prime_UTR |
| ATGTGGCTATGACTAGGGCT+AGG | 0.571180 | 5_3:-47560966 | Msa0814940:intron |
| CACGGGAACAAGCTAATGAA+AGG | 0.573877 | 5_3:+47561543 | None:intergenic |
| TGGGATCAAGAGAGTTCAAG+TGG | 0.574238 | 5_3:-47561967 | Msa0814940:three_prime_UTR |
| CATCATAGAACTCTTTGCAC+GGG | 0.575843 | 5_3:+47561526 | None:intergenic |
| ATTATTCTTACAATTTGATG+TGG | 0.576061 | 5_3:+47562990 | None:intergenic |
| GAAACTAATTGGCCCAGCAA+AGG | 0.580339 | 5_3:-47561889 | Msa0814940:three_prime_UTR |
| ACCGACTATCTGGTTCAGGC+AGG | 0.581478 | 5_3:+47562786 | None:intergenic |
| GTAAGTTTCAAAATTAGGAA+GGG | 0.582712 | 5_3:+47561998 | None:intergenic |
| GACATTGTGCTATTTGGCAA+TGG | 0.584625 | 5_3:-47562467 | Msa0814940:three_prime_UTR |
| ACCAGTACCATTAGATCTCA+CGG | 0.585010 | 5_3:+47561023 | None:intergenic |
| TTACCGTGTAGAGTATCTCA+TGG | 0.588285 | 5_3:-47562393 | Msa0814940:three_prime_UTR |
| CCGGAGATCGTCTCCACCGT+CGG | 0.589692 | 5_3:-47566281 | Msa0814940:intron |
| TAGCAAGTTAGTCTCCCATC+CGG | 0.589833 | 5_3:+47562352 | None:intergenic |
| ATAGGCTGCCTCCTTAACAT+AGG | 0.591828 | 5_3:+47563196 | None:intergenic |
| ACTTCAAGCCATCACTGCGC+CGG | 0.592170 | 5_3:-47566300 | Msa0814940:CDS |
| TGCTATTTGGCAATGGCAAG+AGG | 0.595292 | 5_3:-47562460 | Msa0814940:three_prime_UTR |
| CAGAACATTCTTAATAGCCC+GGG | 0.595796 | 5_3:+47560747 | None:intergenic |
| TCCGTTTAGAACATCCTCGA+GGG | 0.598372 | 5_3:+47564409 | None:intergenic |
| CTAACAATTGTTCTCCTCTG+AGG | 0.599427 | 5_3:-47565956 | Msa0814940:CDS |
| TATGGGGACCACCAGGGACA+GGG | 0.599903 | 5_3:-47562646 | Msa0814940:three_prime_UTR |
| GCCTGCCTGAACCAGATAGT+CGG | 0.606378 | 5_3:-47562787 | Msa0814940:three_prime_UTR |
| CTATGTTAAGCAGGAAATCA+CGG | 0.607531 | 5_3:-47563177 | Msa0814940:three_prime_UTR |
| CTTAACATAGGCGATACGGT+TGG | 0.608593 | 5_3:+47563208 | None:intergenic |
| CATCTCCGATTAGGATGCAA+CGG | 0.615096 | 5_3:+47561778 | None:intergenic |
| GCTTTGATCCAAATACCGGA+TGG | 0.615373 | 5_3:-47562367 | Msa0814940:three_prime_UTR |
| CTTTGATCCAAATACCGGAT+GGG | 0.615509 | 5_3:-47562366 | Msa0814940:three_prime_UTR |
| CCTGAAATCAATCCCATGCA+TGG | 0.618366 | 5_3:-47563036 | Msa0814940:three_prime_UTR |
| GGAAATTGAGCAGTACACTC+GGG | 0.620554 | 5_3:-47561127 | Msa0814940:three_prime_UTR |
| TTGATATTAAATATGACTTG+TGG | 0.621370 | 5_3:-47563130 | Msa0814940:three_prime_UTR |
| CCGTATCGCCTATGTTAAGG+AGG | 0.632128 | 5_3:-47563204 | Msa0814940:three_prime_UTR |
| TACTTCGTCCAAATTCACAT+TGG | 0.633182 | 5_3:+47561631 | None:intergenic |
| GGTAAAGAGCAATTTGGACA+TGG | 0.633461 | 5_3:-47561402 | Msa0814940:three_prime_UTR |
| CAATTTCGCAGGTGGCAAGT+CGG | 0.635677 | 5_3:-47562541 | Msa0814940:three_prime_UTR |
| TAATACTGCAATTTCGCAGG+TGG | 0.636270 | 5_3:-47562549 | Msa0814940:three_prime_UTR |
| AAATAGACAAAGAACAAATG+TGG | 0.638430 | 5_3:-47560983 | Msa0814940:three_prime_UTR |
| AACTTATATGGGGACCACCA+GGG | 0.643082 | 5_3:-47562652 | Msa0814940:three_prime_UTR |
| AACTACTTTCTCTAGGCGAG+TGG | 0.643303 | 5_3:-47560641 | Msa0814940:three_prime_UTR |
| GCTGATATCAAACTTATATG+GGG | 0.644417 | 5_3:-47562662 | Msa0814940:three_prime_UTR |
| TGGACAAAGTCTGAAGAACA+TGG | 0.648510 | 5_3:-47561382 | Msa0814940:three_prime_UTR |
| TCAATTTCAGACTTCCTCAG+AGG | 0.655890 | 5_3:+47565942 | None:intergenic |
| GCAATGAGATCTCCTGACAC+AGG | 0.658736 | 5_3:+47563284 | None:intergenic |
| TGGTTGAAGAGTAGAAATGG+TGG | 0.660109 | 5_3:-47563317 | Msa0814940:three_prime_UTR |
| TCAAGTTTATGAAATTCAGG+AGG | 0.663310 | 5_3:-47561148 | Msa0814940:three_prime_UTR |
| CGGAAAATACATACCGACGG+TGG | 0.673154 | 5_3:+47566268 | None:intergenic |
| TTCCGTTTAGAACATCCTCG+AGG | 0.674084 | 5_3:+47564408 | None:intergenic |
| CTCCGATTAGGATGCAACGG+CGG | 0.683553 | 5_3:+47561781 | None:intergenic |
| TGTACTCTCATGGACCCTCG+AGG | 0.712940 | 5_3:-47564423 | Msa0814940:three_prime_UTR |
| AATCAAGAAAGAATTTGACA+AGG | 0.724929 | 5_3:+47562414 | None:intergenic |
| ATTCCATGAGATACTCTACA+CGG | 0.745836 | 5_3:+47562390 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAAATAAATAAATAA+AGG | + | chr5_3:47561045-47561064 | None:intergenic | 0.0% |
| !! | TATAATATTATTATTAAAAA+AGG | - | chr5_3:47561413-47561432 | Msa0814940:three_prime_UTR | 0.0% |
| !! | TTCAAAAATAAAATTATATG+CGG | + | chr5_3:47561531-47561550 | None:intergenic | 10.0% |
| !!! | ATATAATTTTATTTTTGAAC+CGG | - | chr5_3:47561532-47561551 | Msa0814940:three_prime_UTR | 10.0% |
| !!! | TTTTATAAAGTTAATAACAA+GGG | - | chr5_3:47561863-47561882 | Msa0814940:three_prime_UTR | 10.0% |
| !!! | TTTTAATTTGATTATTTGCA+GGG | - | chr5_3:47560847-47560866 | Msa0814940:three_prime_UTR | 15.0% |
| !!! | ACTTTTTAGATTTTACAAAA+TGG | - | chr5_3:47561182-47561201 | Msa0814940:three_prime_UTR | 15.0% |
| !!! | AAAGGTTACAATTTTTAAAT+TGG | - | chr5_3:47561431-47561450 | Msa0814940:three_prime_UTR | 15.0% |
| !!! | ACTAGATCAAATTTTTTAAA+CGG | - | chr5_3:47561489-47561508 | Msa0814940:three_prime_UTR | 15.0% |
| !!! | AAAAACAATCATTGATTTTT+AGG | - | chr5_3:47561667-47561686 | Msa0814940:intron | 15.0% |
| !!! | CTTTTATAAAGTTAATAACA+AGG | - | chr5_3:47561862-47561881 | Msa0814940:three_prime_UTR | 15.0% |
| !!! | AGGATATATAATTGTTATTA+AGG | + | chr5_3:47561976-47561995 | None:intergenic | 15.0% |
| !!! | AATTTTCAATTAAAAAACAC+CGG | - | chr5_3:47562014-47562033 | Msa0814940:three_prime_UTR | 15.0% |
| !!! | ATTAATTTTTTCTGATACAT+CGG | + | chr5_3:47562623-47562642 | None:intergenic | 15.0% |
| !!! | ATTAATTCAACCAATTTTTT+TGG | - | chr5_3:47562637-47562656 | Msa0814940:three_prime_UTR | 15.0% |
| !! | TTTAAATTTGCCAAAAAAAT+TGG | + | chr5_3:47562650-47562669 | None:intergenic | 15.0% |
| !!! | AACTTTATGTTTTTGAAGAA+AGG | + | chr5_3:47560702-47560721 | None:intergenic | 20.0% |
| !! | AAAAACATAAAGTTGTTGTA+CGG | - | chr5_3:47560708-47560727 | Msa0814940:three_prime_UTR | 20.0% |
| !!! | CTTTTAATTTGATTATTTGC+AGG | - | chr5_3:47560846-47560865 | Msa0814940:three_prime_UTR | 20.0% |
| !! | AAAAAAACAAGGATAAGAAT+GGG | + | chr5_3:47560973-47560992 | None:intergenic | 20.0% |
| !! | AAAAAAAACAAGGATAAGAA+TGG | + | chr5_3:47560974-47560993 | None:intergenic | 20.0% |
| !! | AAGAAGAAGAAAAAAAAACA+AGG | + | chr5_3:47560984-47561003 | None:intergenic | 20.0% |
| !! | TAGATAGATAGATAGAAAAA+GGG | + | chr5_3:47561242-47561261 | None:intergenic | 20.0% |
| !! | ATAGATAGATAGATAGAAAA+AGG | + | chr5_3:47561243-47561262 | None:intergenic | 20.0% |
| !! | TAGTGTAATGCAATTTAATT+TGG | + | chr5_3:47561473-47561492 | None:intergenic | 20.0% |
| !! | AATATAAAGCATGAAAAAGT+TGG | - | chr5_3:47561618-47561637 | Msa0814940:three_prime_UTR | 20.0% |
| !! | CTATTGAAAAATGATGAAAA+TGG | + | chr5_3:47561898-47561917 | None:intergenic | 20.0% |
| !! | ATTCCTTGAAATTATTAAGA+AGG | + | chr5_3:47563152-47563171 | None:intergenic | 20.0% |
| !!! | TTTTTGTATGTGTTCAATAT+AGG | - | chr5_3:47563171-47563190 | Msa0814940:three_prime_UTR | 20.0% |
| !!! | AAAGTTTAGATATCTTTTCT+GGG | + | chr5_3:47563197-47563216 | None:intergenic | 20.0% |
| !!! | AAAAGTTTAGATATCTTTTC+TGG | + | chr5_3:47563198-47563217 | None:intergenic | 20.0% |
| !! | TTGATATTAAATATGACTTG+TGG | - | chr5_3:47563712-47563731 | Msa0814940:intron | 20.0% |
| !! | ATTATTCTTACAATTTGATG+TGG | + | chr5_3:47563855-47563874 | None:intergenic | 20.0% |
| !! | TTCATTTAATGTATAGCATA+CGG | - | chr5_3:47563899-47563918 | Msa0814940:intron | 20.0% |
| !! | ATAATTAAAAGCCTTTATCA+AGG | - | chr5_3:47565506-47565525 | Msa0814940:intron | 20.0% |
| !! | AACATTCACACATATTAATT+TGG | + | chr5_3:47566229-47566248 | None:intergenic | 20.0% |
| !! | AATTAATATGTGTGAATGTT+TGG | - | chr5_3:47566229-47566248 | Msa0814940:intron | 20.0% |
| ! | AAATAATTTCTTAGACCTGA+AGG | + | chr5_3:47560412-47560431 | None:intergenic | 25.0% |
| !!! | AGCTTCTTTTTTATACATGA+AGG | + | chr5_3:47560447-47560466 | None:intergenic | 25.0% |
| ! | CCTTTATTGATAGAAAAAAG+TGG | + | chr5_3:47560673-47560692 | None:intergenic | 25.0% |
| !!! | CCACTTTTTTCTATCAATAA+AGG | - | chr5_3:47560670-47560689 | Msa0814940:three_prime_UTR | 25.0% |
| !!! | ACTTTAAGGTATGTTTAGAT+TGG | - | chr5_3:47561122-47561141 | Msa0814940:three_prime_UTR | 25.0% |
| !! | GATTGGAGTTTAAAATGAAA+TGG | - | chr5_3:47561139-47561158 | Msa0814940:three_prime_UTR | 25.0% |
| !!! | TTTTTAGGCAAAAAATCATC+CGG | + | chr5_3:47561554-47561573 | None:intergenic | 25.0% |
| !! | TGGAATATGGGTTAAAAAAA+AGG | - | chr5_3:47561638-47561657 | Msa0814940:three_prime_UTR | 25.0% |
| !! | GGAATATGGGTTAAAAAAAA+GGG | - | chr5_3:47561639-47561658 | Msa0814940:three_prime_UTR | 25.0% |
| ! | AGGTAATATATCTTCTAACT+TGG | - | chr5_3:47561687-47561706 | Msa0814940:intron | 25.0% |
| ! | TTGCAAAAATGAAAAGAATG+AGG | + | chr5_3:47561996-47562015 | None:intergenic | 25.0% |
| !! | TTTCATTTTCATGCATTAAC+CGG | + | chr5_3:47562036-47562055 | None:intergenic | 25.0% |
| ! | GTTAATGCATGAAAATGAAA+AGG | - | chr5_3:47562036-47562055 | Msa0814940:three_prime_UTR | 25.0% |
| ! | AAGGATTGTACTTATTCAAA+AGG | - | chr5_3:47562055-47562074 | Msa0814940:three_prime_UTR | 25.0% |
| ! | AGGATTGTACTTATTCAAAA+GGG | - | chr5_3:47562056-47562075 | Msa0814940:three_prime_UTR | 25.0% |
| ! | TCTTAATGATTGTTTAGCAA+AGG | - | chr5_3:47562337-47562356 | Msa0814940:three_prime_UTR | 25.0% |
| ! | TTATAGATATTGTACTCTCA+TGG | - | chr5_3:47562409-47562428 | Msa0814940:three_prime_UTR | 25.0% |
| !!! | CATCGGTTGATAAAAAAAAA+TGG | + | chr5_3:47562606-47562625 | None:intergenic | 25.0% |
| ! | ATCTTTGCAACTACTAAAAA+GGG | + | chr5_3:47562957-47562976 | None:intergenic | 25.0% |
| ! | CAACCTTCTTAATAATTTCA+AGG | - | chr5_3:47563146-47563165 | Msa0814940:three_prime_UTR | 25.0% |
| !!! | ATGAATTGATTTTCTGTTTC+AGG | + | chr5_3:47563486-47563505 | None:intergenic | 25.0% |
| !! | TTCAAGTCATTAAAGCTTTT+AGG | + | chr5_3:47563600-47563619 | None:intergenic | 25.0% |
| ! | AATATCAATCTTCATGCATT+TGG | + | chr5_3:47563700-47563719 | None:intergenic | 25.0% |
| !!! | TTTTAATTATGTCCATGCAT+GGG | + | chr5_3:47563821-47563840 | None:intergenic | 25.0% |
| ! | GACATAATTAAAACAGTGTT+GGG | - | chr5_3:47563828-47563847 | Msa0814940:intron | 25.0% |
| !! | AGAATAATCTTTTGATCTGA+AGG | - | chr5_3:47563867-47563886 | Msa0814940:intron | 25.0% |
| ! | GTATGCTATACATTAAATGA+AGG | + | chr5_3:47563900-47563919 | None:intergenic | 25.0% |
| !!! | AATACAAAAAAGCACTAAAC+AGG | + | chr5_3:47564009-47564028 | None:intergenic | 25.0% |
| ! | ATGCTGATATCAAACTTATA+TGG | - | chr5_3:47564178-47564197 | Msa0814940:intron | 25.0% |
| ! | TGCTGATATCAAACTTATAT+GGG | - | chr5_3:47564179-47564198 | Msa0814940:intron | 25.0% |
| ! | AATCAAGAAAGAATTTGACA+AGG | + | chr5_3:47564431-47564450 | None:intergenic | 25.0% |
| !! | TTCATCTCTTTTCTTGAATT+TGG | + | chr5_3:47564742-47564761 | None:intergenic | 25.0% |
| ! | GTAAGTTTCAAAATTAGGAA+GGG | + | chr5_3:47564847-47564866 | None:intergenic | 25.0% |
| ! | AGTAAGTTTCAAAATTAGGA+AGG | + | chr5_3:47564848-47564867 | None:intergenic | 25.0% |
| !!! | TTCCTAATTTTGAAACTTAC+TGG | - | chr5_3:47564847-47564866 | Msa0814940:intron | 25.0% |
| ! | TCAAGTTCTATGAAACTAAT+TGG | - | chr5_3:47564942-47564961 | Msa0814940:intron | 25.0% |
| ! | TCAATTACTAAAAATTGCAC+TGG | + | chr5_3:47564984-47565003 | None:intergenic | 25.0% |
| !! | TTCTTTTATTAACATAGCCA+TGG | - | chr5_3:47565418-47565437 | Msa0814940:intron | 25.0% |
| !! | TCTTTTATTAACATAGCCAT+GGG | - | chr5_3:47565419-47565438 | Msa0814940:intron | 25.0% |
| !! | AACTTTTATGTTGTATTGCA+TGG | - | chr5_3:47565543-47565562 | Msa0814940:intron | 25.0% |
| ! | TAAATGCATAATTCATACTG+AGG | + | chr5_3:47565585-47565604 | None:intergenic | 25.0% |
| ! | TCATAAACTTGAGCATTATA+TGG | + | chr5_3:47565686-47565705 | None:intergenic | 25.0% |
| ! | AAATAGACAAAGAACAAATG+TGG | - | chr5_3:47565859-47565878 | Msa0814940:intron | 25.0% |
| ! | TAGTTATTGATGCTAAGAAT+AGG | - | chr5_3:47566035-47566054 | Msa0814940:intron | 25.0% |
| ! | AGTTATTGATGCTAAGAATA+GGG | - | chr5_3:47566036-47566055 | Msa0814940:intron | 25.0% |
| !! | TTTTGACAAAAACTACACTT+CGG | + | chr5_3:47566307-47566326 | None:intergenic | 25.0% |
| !! | AGTTTTTGTCAAAATTGTGA+TGG | - | chr5_3:47566313-47566332 | Msa0814940:CDS | 25.0% |
| ! | TAACGTGTTTATGTTAGAAA+TGG | - | chr5_3:47566338-47566357 | Msa0814940:CDS | 25.0% |
| ! | TGGTTAATCAAGTTTCATAT+AGG | - | chr5_3:47566358-47566377 | Msa0814940:CDS | 25.0% |
| ! | GGTTAATCAAGTTTCATATA+GGG | - | chr5_3:47566359-47566378 | Msa0814940:CDS | 25.0% |
| !!! | GTCTTATTTGTTAACTTTTG+TGG | - | chr5_3:47566422-47566441 | Msa0814940:CDS | 25.0% |
| AACTATTGTATACTTCCTTC+AGG | - | chr5_3:47560394-47560413 | Msa0814940:three_prime_UTR | 30.0% | |
| AGAATAGGAATGAAAGACAT+CGG | + | chr5_3:47560597-47560616 | None:intergenic | 30.0% | |
| !!! | TGAACTTTTGAAGTTCGATT+TGG | - | chr5_3:47560795-47560814 | Msa0814940:three_prime_UTR | 30.0% |
| AATATTACGCTTTGTGACAA+AGG | - | chr5_3:47560922-47560941 | Msa0814940:intron | 30.0% | |
| TTCAAGCTAACTGAACTTTA+AGG | - | chr5_3:47561108-47561127 | Msa0814940:three_prime_UTR | 30.0% | |
| !! | TGTCTGTAATTTAGCCTTAA+GGG | + | chr5_3:47561219-47561238 | None:intergenic | 30.0% |
| ! | AGCGGTTTCGATTAATTTTT+AGG | + | chr5_3:47561569-47561588 | None:intergenic | 30.0% |
| ! | ATATTTTTCCTCACCTAGTT+AGG | + | chr5_3:47561603-47561622 | None:intergenic | 30.0% |
| AGCATGAAAAAGTTGGAATA+TGG | - | chr5_3:47561625-47561644 | Msa0814940:three_prime_UTR | 30.0% | |
| GCATGAAAAAGTTGGAATAT+GGG | - | chr5_3:47561626-47561645 | Msa0814940:three_prime_UTR | 30.0% | |
| ! | TATGGGTTAAAAAAAAGGGT+CGG | - | chr5_3:47561643-47561662 | Msa0814940:intron | 30.0% |
| GCATAGTAGTAGTTATACAT+TGG | - | chr5_3:47561795-47561814 | Msa0814940:three_prime_UTR | 30.0% | |
| ACTTTCACAGTTAATGAAAG+TGG | + | chr5_3:47562157-47562176 | None:intergenic | 30.0% | |
| ! | AGACATATACTTCAACCTTT+TGG | - | chr5_3:47562242-47562261 | Msa0814940:three_prime_UTR | 30.0% |
| ! | CACAAATATAAGGTACCAAA+AGG | + | chr5_3:47562260-47562279 | None:intergenic | 30.0% |
| ! | CTTTTGGTACCTTATATTTG+TGG | - | chr5_3:47562258-47562277 | Msa0814940:three_prime_UTR | 30.0% |
| TGAATGGAACCACAAATATA+AGG | + | chr5_3:47562270-47562289 | None:intergenic | 30.0% | |
| GAACACAATGAAATAGTGAA+TGG | + | chr5_3:47562286-47562305 | None:intergenic | 30.0% | |
| AATGATTGTTTAGCAAAGGA+TGG | - | chr5_3:47562341-47562360 | Msa0814940:three_prime_UTR | 30.0% | |
| AGTGAAGAGGATCTTAAAAT+CGG | - | chr5_3:47562381-47562400 | Msa0814940:three_prime_UTR | 30.0% | |
| AATATGTAACCCTGACATTA+AGG | - | chr5_3:47562517-47562536 | Msa0814940:three_prime_UTR | 30.0% | |
| AAAATGATCCTACAAAGACA+AGG | - | chr5_3:47562668-47562687 | Msa0814940:three_prime_UTR | 30.0% | |
| CTCAATGAGAATCTTAAACT+CGG | - | chr5_3:47562696-47562715 | Msa0814940:three_prime_UTR | 30.0% | |
| TCAATGAGAATCTTAAACTC+GGG | - | chr5_3:47562697-47562716 | Msa0814940:three_prime_UTR | 30.0% | |
| TTATAGATACTGTACTCTCT+TGG | - | chr5_3:47562724-47562743 | Msa0814940:three_prime_UTR | 30.0% | |
| TGAGAATCTTTACAAAGACA+AGG | - | chr5_3:47562767-47562786 | Msa0814940:three_prime_UTR | 30.0% | |
| !! | TTCATTGTGAGTGTTGAAAA+GGG | + | chr5_3:47562804-47562823 | None:intergenic | 30.0% |
| !! | TTTCATTGTGAGTGTTGAAA+AGG | + | chr5_3:47562805-47562824 | None:intergenic | 30.0% |
| ! | TCACAATGAAAAAGTGTACT+TGG | - | chr5_3:47562814-47562833 | Msa0814940:intron | 30.0% |
| GAGAAAATCTAACAATGAAG+TGG | + | chr5_3:47562935-47562954 | None:intergenic | 30.0% | |
| CATCTTTGCAACTACTAAAA+AGG | + | chr5_3:47562958-47562977 | None:intergenic | 30.0% | |
| AAGCCTGAAAAAAGATCTAT+CGG | + | chr5_3:47563102-47563121 | None:intergenic | 30.0% | |
| ATTAAGAAGGTTGCTCTATA+GGG | + | chr5_3:47563139-47563158 | None:intergenic | 30.0% | |
| TATTAAGAAGGTTGCTCTAT+AGG | + | chr5_3:47563140-47563159 | None:intergenic | 30.0% | |
| ! | TGTGAAAATTGTTTTCTCTC+AGG | - | chr5_3:47563287-47563306 | Msa0814940:three_prime_UTR | 30.0% |
| ! | CTCTTTTATTCCTCTATTGT+TGG | - | chr5_3:47563356-47563375 | Msa0814940:three_prime_UTR | 30.0% |
| ! | TTTTATTCCTCTATTGTTGG+AGG | - | chr5_3:47563359-47563378 | Msa0814940:three_prime_UTR | 30.0% |
| ! | GATTTATCTTCAAGCTTGTT+TGG | - | chr5_3:47563393-47563412 | Msa0814940:three_prime_UTR | 30.0% |
| ACATTCTGGATTTCACATAA+AGG | + | chr5_3:47563432-47563451 | None:intergenic | 30.0% | |
| !!! | CTATGCTTTTTTCAACATTC+TGG | + | chr5_3:47563446-47563465 | None:intergenic | 30.0% |
| ! | TGATTTTCTGTTTCAGGAAT+GGG | + | chr5_3:47563480-47563499 | None:intergenic | 30.0% |
| ! | TTGATTTTCTGTTTCAGGAA+TGG | + | chr5_3:47563481-47563500 | None:intergenic | 30.0% |
| CATTCGTTGTAATGTTCATA+AGG | + | chr5_3:47563770-47563789 | None:intergenic | 30.0% | |
| TTACAACGAATGTTCGTATT+CGG | - | chr5_3:47563778-47563797 | Msa0814940:intron | 30.0% | |
| !!! | GTTTTAATTATGTCCATGCA+TGG | + | chr5_3:47563822-47563841 | None:intergenic | 30.0% |
| GGACATAATTAAAACAGTGT+TGG | - | chr5_3:47563827-47563846 | Msa0814940:intron | 30.0% | |
| ATTTAATGTATAGCATACGG+TGG | - | chr5_3:47563902-47563921 | Msa0814940:intron | 30.0% | |
| TTCATATTAATTGACCATGC+AGG | + | chr5_3:47563962-47563981 | None:intergenic | 30.0% | |
| GCTGATATCAAACTTATATG+GGG | - | chr5_3:47564180-47564199 | Msa0814940:intron | 30.0% | |
| TGAGCATGATACATATAGTT+TGG | - | chr5_3:47564350-47564369 | Msa0814940:intron | 30.0% | |
| GAGCATGATACATATAGTTT+GGG | - | chr5_3:47564351-47564370 | Msa0814940:intron | 30.0% | |
| ATGAAATTCAGTTCTCATCA+AGG | - | chr5_3:47564405-47564424 | Msa0814940:three_prime_UTR | 30.0% | |
| TATAACAGTTGAAAGTAAGC+AGG | + | chr5_3:47564771-47564790 | None:intergenic | 30.0% | |
| AAAGTGAACTTAGTATGCTA+AGG | + | chr5_3:47564812-47564831 | None:intergenic | 30.0% | |
| CTCCAGTAAGTTTCAAAATT+AGG | + | chr5_3:47564852-47564871 | None:intergenic | 30.0% | |
| !!! | AATTTTGAAACTTACTGGAG+AGG | - | chr5_3:47564852-47564871 | Msa0814940:intron | 30.0% |
| ! | TTAGTAAAAAGCAAGGTACT+CGG | - | chr5_3:47565104-47565123 | Msa0814940:intron | 30.0% |
| TTTGAAAGGCTTGTAATGTT+GGG | - | chr5_3:47565236-47565255 | Msa0814940:intron | 30.0% | |
| AAGAATACATTTCTCCTTCA+AGG | + | chr5_3:47565394-47565413 | None:intergenic | 30.0% | |
| AGAGAAATTGACCTTGATAA+AGG | + | chr5_3:47565520-47565539 | None:intergenic | 30.0% | |
| ACAAAGAAGAAAGTAAGCAT+AGG | - | chr5_3:47565650-47565669 | Msa0814940:intron | 30.0% | |
| TGCTCAAGTTTATGAAATTC+AGG | - | chr5_3:47565691-47565710 | Msa0814940:intron | 30.0% | |
| TCAAGTTTATGAAATTCAGG+AGG | - | chr5_3:47565694-47565713 | Msa0814940:intron | 30.0% | |
| AGATACTGTCTTTGGATATT+AGG | - | chr5_3:47565968-47565987 | Msa0814940:CDS | 30.0% | |
| ACATATCAACTACTTTCTCT+AGG | - | chr5_3:47566194-47566213 | Msa0814940:intron | 30.0% | |
| ! | GAGCTTAAACAAAAGTACAT+TGG | + | chr5_3:47566285-47566304 | None:intergenic | 30.0% |
| TAATCAAGTTTCATATAGGG+TGG | - | chr5_3:47566362-47566381 | Msa0814940:CDS | 30.0% | |
| AATCAAGTTTCATATAGGGT+GGG | - | chr5_3:47566363-47566382 | Msa0814940:CDS | 30.0% | |
| GTGCATAGAGAAAGAAGAAT+AGG | + | chr5_3:47560612-47560631 | None:intergenic | 35.0% | |
| ! | GTTGTACGGTTTCTTACTTT+TGG | - | chr5_3:47560722-47560741 | Msa0814940:three_prime_UTR | 35.0% |
| ACATTCAAAAAGATGCCAGA+GGG | + | chr5_3:47560760-47560779 | None:intergenic | 35.0% | |
| !! | TTTGAAGTTCGATTTGGTAG+TGG | - | chr5_3:47560801-47560820 | Msa0814940:three_prime_UTR | 35.0% |
| !! | GTGTCTGTAATTTAGCCTTA+AGG | + | chr5_3:47561220-47561239 | None:intergenic | 35.0% |
| !! | CACCTAGTTAGGAGTATTAA+CGG | + | chr5_3:47561592-47561611 | None:intergenic | 35.0% |
| TTAATACTCCTAACTAGGTG+AGG | - | chr5_3:47561592-47561611 | Msa0814940:three_prime_UTR | 35.0% | |
| GCAATATTGCAATGTTGCAT+AGG | + | chr5_3:47561777-47561796 | None:intergenic | 35.0% | |
| TCATCTTAACCAATACCTCA+AGG | - | chr5_3:47561934-47561953 | Msa0814940:three_prime_UTR | 35.0% | |
| CATCTTAACCAATACCTCAA+GGG | - | chr5_3:47561935-47561954 | Msa0814940:three_prime_UTR | 35.0% | |
| GTGAAGAGGATCTTAAAATC+GGG | - | chr5_3:47562382-47562401 | Msa0814940:three_prime_UTR | 35.0% | |
| CGGAAATCTTTACAAAGACA+AGG | - | chr5_3:47562452-47562471 | Msa0814940:three_prime_UTR | 35.0% | |
| GTTATACGACCTTAATGTCA+GGG | + | chr5_3:47562529-47562548 | None:intergenic | 35.0% | |
| TGTTATACGACCTTAATGTC+AGG | + | chr5_3:47562530-47562549 | None:intergenic | 35.0% | |
| !! | ATCGGAAGATAGCTTTAGAT+GGG | + | chr5_3:47563084-47563103 | None:intergenic | 35.0% |
| !! | TATCGGAAGATAGCTTTAGA+TGG | + | chr5_3:47563085-47563104 | None:intergenic | 35.0% |
| !!! | CTTCCGATAGATCTTTTTTC+AGG | - | chr5_3:47563096-47563115 | Msa0814940:three_prime_UTR | 35.0% |
| !!! | TTTTTCAGGCTTTAGCAACT+TGG | - | chr5_3:47563110-47563129 | Msa0814940:three_prime_UTR | 35.0% |
| !! | TTTTCAGGCTTTAGCAACTT+GGG | - | chr5_3:47563111-47563130 | Msa0814940:three_prime_UTR | 35.0% |
| CATTTCTACTCTTCAACCAT+AGG | + | chr5_3:47563524-47563543 | None:intergenic | 35.0% | |
| CTATGGTTGAAGAGTAGAAA+TGG | - | chr5_3:47563522-47563541 | Msa0814940:three_prime_UTR | 35.0% | |
| GGAAATTATAAACCTGTGTC+AGG | - | chr5_3:47563546-47563565 | Msa0814940:intron | 35.0% | |
| TCATTGCTTTCACACACATT+AGG | - | chr5_3:47563574-47563593 | Msa0814940:intron | 35.0% | |
| CTATGTTAAGCAGGAAATCA+CGG | - | chr5_3:47563665-47563684 | Msa0814940:intron | 35.0% | |
| !!! | ATGATGTTACTTTTCCTGCA+TGG | - | chr5_3:47563945-47563964 | Msa0814940:intron | 35.0% |
| TGCGAAATTGCAGTATTAGT+TGG | + | chr5_3:47564291-47564310 | None:intergenic | 35.0% | |
| AACTAATACTGCAATTTCGC+AGG | - | chr5_3:47564290-47564309 | Msa0814940:intron | 35.0% | |
| ! | TCGGTTGAATAGGTTAGTTA+TGG | - | chr5_3:47564320-47564339 | Msa0814940:intron | 35.0% |
| ATTCCATGAGATACTCTACA+CGG | + | chr5_3:47564455-47564474 | None:intergenic | 35.0% | |
| GAATGCTTTGATCCAAATAC+CGG | - | chr5_3:47564471-47564490 | Msa0814940:three_prime_UTR | 35.0% | |
| ! | TTTGTTAGCTGATTTCTCCA+TGG | + | chr5_3:47564538-47564557 | None:intergenic | 35.0% |
| ATCTCTCATTTCACTGGAAA+CGG | - | chr5_3:47564656-47564675 | Msa0814940:intron | 35.0% | |
| !! | CTTGATTTGCTAAAGTCTCT+TGG | - | chr5_3:47564699-47564718 | Msa0814940:intron | 35.0% |
| AAGTCTCTTGGAATTTCCAT+CGG | - | chr5_3:47564711-47564730 | Msa0814940:intron | 35.0% | |
| TCCTGCATTAGTAAAAAGCA+AGG | - | chr5_3:47565097-47565116 | Msa0814940:intron | 35.0% | |
| !!! | ACCTTGCTTTTTACTAATGC+AGG | + | chr5_3:47565101-47565120 | None:intergenic | 35.0% |
| ATAGCAGACCAATGTGAATT+TGG | - | chr5_3:47565203-47565222 | Msa0814940:intron | 35.0% | |
| TACTTCGTCCAAATTCACAT+TGG | + | chr5_3:47565214-47565233 | None:intergenic | 35.0% | |
| TTGGACGAAGTATGTTTGAA+AGG | - | chr5_3:47565222-47565241 | Msa0814940:intron | 35.0% | |
| GTTTGAAAGGCTTGTAATGT+TGG | - | chr5_3:47565235-47565254 | Msa0814940:intron | 35.0% | |
| GTAAATGTTCGTTCTGTTGA+TGG | - | chr5_3:47565758-47565777 | Msa0814940:intron | 35.0% | |
| ATATCTACCGTGAGATCTAA+TGG | - | chr5_3:47565812-47565831 | Msa0814940:intron | 35.0% | |
| AACAAATGTGGCTATGACTA+GGG | - | chr5_3:47565871-47565890 | Msa0814940:intron | 35.0% | |
| ! | TTTTGTGCAGATACTGTCTT+TGG | - | chr5_3:47565960-47565979 | Msa0814940:CDS | 35.0% |
| TAATCAACAGTGACTCTGTT+TGG | - | chr5_3:47566005-47566024 | Msa0814940:intron | 35.0% | |
| TGCTGAAGAGGACAAAAAAT+TGG | - | chr5_3:47566072-47566091 | Msa0814940:intron | 35.0% | |
| ACAGAACATTCTTAATAGCC+CGG | + | chr5_3:47566099-47566118 | None:intergenic | 35.0% | |
| TTGAGTCACCATTCAAGAAA+CGG | - | chr5_3:47566143-47566162 | Msa0814940:intron | 35.0% | |
| ATCAAGTTTCATATAGGGTG+GGG | - | chr5_3:47566364-47566383 | Msa0814940:CDS | 35.0% | |
| !!! | CATCTTGTGAGACTTTTTTG+AGG | - | chr5_3:47566388-47566407 | Msa0814940:CDS | 35.0% |
| ! | TAGATTGAGACTGGAGCTTT+TGG | + | chr5_3:47560523-47560542 | None:intergenic | 40.0% |
| CATCGGAAAATACATACCGA+CGG | + | chr5_3:47560580-47560599 | None:intergenic | 40.0% | |
| CACATTCAAAAAGATGCCAG+AGG | + | chr5_3:47560761-47560780 | None:intergenic | 40.0% | |
| CTAACAATTGTTCTCCTCTG+AGG | - | chr5_3:47560886-47560905 | Msa0814940:intron | 40.0% | |
| TCAATTTCAGACTTCCTCAG+AGG | + | chr5_3:47560903-47560922 | None:intergenic | 40.0% | |
| TTACGCTTTGTGACAAAGGT+TGG | - | chr5_3:47560926-47560945 | Msa0814940:intron | 40.0% | |
| TGGATGTTATTCCACCCTTA+AGG | - | chr5_3:47561202-47561221 | Msa0814940:three_prime_UTR | 40.0% | |
| !! | CTGTAATTTAGCCTTAAGGG+TGG | + | chr5_3:47561216-47561235 | None:intergenic | 40.0% |
| !! | AGTTAGGAGTATTAACGGAG+CGG | + | chr5_3:47561587-47561606 | None:intergenic | 40.0% |
| CTCCGTTAATACTCCTAACT+AGG | - | chr5_3:47561587-47561606 | Msa0814940:three_prime_UTR | 40.0% | |
| TTAATGAAAGTGGCGCATGA+GGG | + | chr5_3:47562147-47562166 | None:intergenic | 40.0% | |
| AGGATGGAGAAGACAAGAAA+TGG | - | chr5_3:47562357-47562376 | Msa0814940:three_prime_UTR | 40.0% | |
| GACAAGAAATGGAAGTGAAG+AGG | - | chr5_3:47562368-47562387 | Msa0814940:three_prime_UTR | 40.0% | |
| GAGAACATCCTTGTCTTTGT+AGG | + | chr5_3:47562679-47562698 | None:intergenic | 40.0% | |
| CTCATTGAGAACATCCTCTA+GGG | + | chr5_3:47562751-47562770 | None:intergenic | 40.0% | |
| TCTCATTGAGAACATCCTCT+AGG | + | chr5_3:47562752-47562771 | None:intergenic | 40.0% | |
| TATCTCCTGAGCAAACATGA+GGG | + | chr5_3:47563041-47563060 | None:intergenic | 40.0% | |
| !! | TCGGAAGATAGCTTTAGATG+GGG | + | chr5_3:47563083-47563102 | None:intergenic | 40.0% |
| !! | GTTGCTGACTTAAATGTCTC+TGG | + | chr5_3:47563324-47563343 | None:intergenic | 40.0% |
| TACAGTTCCATCATGTCCTA+TGG | - | chr5_3:47563505-47563524 | Msa0814940:three_prime_UTR | 40.0% | |
| TCTTCAACCATAGGACATGA+TGG | + | chr5_3:47563515-47563534 | None:intergenic | 40.0% | |
| TGGTTGAAGAGTAGAAATGG+TGG | - | chr5_3:47563525-47563544 | Msa0814940:three_prime_UTR | 40.0% | |
| TTAACATAGGCGATACGGTT+GGG | + | chr5_3:47563636-47563655 | None:intergenic | 40.0% | |
| CGTGATTTCCTGCTTAACAT+AGG | + | chr5_3:47563667-47563686 | None:intergenic | 40.0% | |
| ! | CATGCATGGGATTGATTTCA+GGG | + | chr5_3:47563808-47563827 | None:intergenic | 40.0% |
| ATGAAAGAAGACCGACTATC+TGG | + | chr5_3:47564069-47564088 | None:intergenic | 40.0% | |
| GCTTGAAACAGCATCTTCTT+GGG | + | chr5_3:47564133-47564152 | None:intergenic | 40.0% | |
| AGCTTGAAACAGCATCTTCT+TGG | + | chr5_3:47564134-47564153 | None:intergenic | 40.0% | |
| TAATACTGCAATTTCGCAGG+TGG | - | chr5_3:47564293-47564312 | Msa0814940:intron | 40.0% | |
| ! | TTGGGTGACATTGTGCTATT+TGG | - | chr5_3:47564369-47564388 | Msa0814940:intron | 40.0% |
| !! | GACATTGTGCTATTTGGCAA+TGG | - | chr5_3:47564375-47564394 | Msa0814940:intron | 40.0% |
| ! | TTACCGTGTAGAGTATCTCA+TGG | - | chr5_3:47564449-47564468 | Msa0814940:three_prime_UTR | 40.0% |
| CTTTGATCCAAATACCGGAT+GGG | - | chr5_3:47564476-47564495 | Msa0814940:three_prime_UTR | 40.0% | |
| GATAAAGTTGCTCAAGTCCA+TGG | - | chr5_3:47564518-47564537 | Msa0814940:intron | 40.0% | |
| TCCAGTGAAATGAGAGATGT+TGG | + | chr5_3:47564654-47564673 | None:intergenic | 40.0% | |
| AGTCTCTTGGAATTTCCATC+GGG | - | chr5_3:47564712-47564731 | Msa0814940:intron | 40.0% | |
| ! | TTTGAAACTTACTGGAGAGG+TGG | - | chr5_3:47564855-47564874 | Msa0814940:intron | 40.0% |
| TTGAAACTTACTGGAGAGGT+GGG | - | chr5_3:47564856-47564875 | Msa0814940:intron | 40.0% | |
| ACAATTCCATTACAGCTGTC+CGG | - | chr5_3:47565035-47565054 | Msa0814940:intron | 40.0% | |
| CATCATAGAACTCTTTGCAC+GGG | + | chr5_3:47565319-47565338 | None:intergenic | 40.0% | |
| CCATCATAGAACTCTTTGCA+CGG | + | chr5_3:47565320-47565339 | None:intergenic | 40.0% | |
| TAGCTTTCTTTCGTGACAAC+AGG | + | chr5_3:47565359-47565378 | None:intergenic | 40.0% | |
| TCCAAATTGCTCTTTACCCA+TGG | + | chr5_3:47565438-47565457 | None:intergenic | 40.0% | |
| GGTAAAGAGCAATTTGGACA+TGG | - | chr5_3:47565440-47565459 | Msa0814940:intron | 40.0% | |
| TGGACAAAGTCTGAAGAACA+TGG | - | chr5_3:47565460-47565479 | Msa0814940:intron | 40.0% | |
| AAGTCTGAAGAACATGGTTG+AGG | - | chr5_3:47565466-47565485 | Msa0814940:intron | 40.0% | |
| CATACTGAGGCCTAAGATTT+CGG | + | chr5_3:47565572-47565591 | None:intergenic | 40.0% | |
| TTCTTTGTCCTCATGAACAC+TGG | + | chr5_3:47565638-47565657 | None:intergenic | 40.0% | |
| AGGAAATTGAGCAGTACACT+CGG | - | chr5_3:47565714-47565733 | Msa0814940:intron | 40.0% | |
| !!! | CGTTCTGTTGATGGTTTTCA+AGG | - | chr5_3:47565767-47565786 | Msa0814940:intron | 40.0% |
| !!! | TCTGTTGATGGTTTTCAAGG+TGG | - | chr5_3:47565770-47565789 | Msa0814940:intron | 40.0% |
| ACCAGTACCATTAGATCTCA+CGG | + | chr5_3:47565822-47565841 | None:intergenic | 40.0% | |
| !! | TCTAATGGTACTGGTGATGT+TGG | - | chr5_3:47565827-47565846 | Msa0814940:intron | 40.0% |
| GAACAAATGTGGCTATGACT+AGG | - | chr5_3:47565870-47565889 | Msa0814940:intron | 40.0% | |
| TTGTTTCCACAATGCTGAAG+AGG | - | chr5_3:47566060-47566079 | Msa0814940:intron | 40.0% | |
| ! | TTTTGTCCTCTTCAGCATTG+TGG | + | chr5_3:47566069-47566088 | None:intergenic | 40.0% |
| AAGAGGACAAAAAATTGGCC+CGG | - | chr5_3:47566077-47566096 | Msa0814940:intron | 40.0% | |
| CAGAACATTCTTAATAGCCC+GGG | + | chr5_3:47566098-47566117 | None:intergenic | 40.0% | |
| ATTCTTCCAGTCGTTGAATC+TGG | + | chr5_3:47566123-47566142 | None:intergenic | 40.0% | |
| TGAATGTTTGGATGAGCGAT+GGG | - | chr5_3:47566241-47566260 | Msa0814940:intron | 40.0% | |
| ! | ACAAAAGTACATTGGCACCA+TGG | + | chr5_3:47566277-47566296 | None:intergenic | 40.0% |
| ! | ATTGAGACTGGAGCTTTTGG+CGG | + | chr5_3:47560520-47560539 | None:intergenic | 45.0% |
| GGCTTGAAGTAGATTGAGAC+TGG | + | chr5_3:47560532-47560551 | None:intergenic | 45.0% | |
| TGGCTCAAACTTAATCCCTC+TGG | - | chr5_3:47560742-47560761 | Msa0814940:three_prime_UTR | 45.0% | |
| !! | AAAGAGTGCCCTTGAGGTAT+TGG | + | chr5_3:47561946-47561965 | None:intergenic | 45.0% |
| !! | AATGCTAAAGAGTGCCCTTG+AGG | + | chr5_3:47561952-47561971 | None:intergenic | 45.0% |
| GTTAATGAAAGTGGCGCATG+AGG | + | chr5_3:47562148-47562167 | None:intergenic | 45.0% | |
| ! | ACCCTCGAGGATGTTCTAAA+CGG | - | chr5_3:47562432-47562451 | Msa0814940:three_prime_UTR | 45.0% |
| ! | TCCGTTTAGAACATCCTCGA+GGG | + | chr5_3:47562436-47562455 | None:intergenic | 45.0% |
| ! | TTCCGTTTAGAACATCCTCG+AGG | + | chr5_3:47562437-47562456 | None:intergenic | 45.0% |
| ATCTCCTGAGCAAACATGAG+GGG | + | chr5_3:47563040-47563059 | None:intergenic | 45.0% | |
| CTATCTCCTGAGCAAACATG+AGG | + | chr5_3:47563042-47563061 | None:intergenic | 45.0% | |
| CGTGTTTCCTCCAACAATAG+AGG | + | chr5_3:47563369-47563388 | None:intergenic | 45.0% | |
| CTTAACATAGGCGATACGGT+TGG | + | chr5_3:47563637-47563656 | None:intergenic | 45.0% | |
| CAACCGTATCGCCTATGTTA+AGG | - | chr5_3:47563635-47563654 | Msa0814940:intron | 45.0% | |
| CCTCCTTAACATAGGCGATA+CGG | + | chr5_3:47563641-47563660 | None:intergenic | 45.0% | |
| ATAGGCTGCCTCCTTAACAT+AGG | + | chr5_3:47563649-47563668 | None:intergenic | 45.0% | |
| ! | CCATGCATGGGATTGATTTC+AGG | + | chr5_3:47563809-47563828 | None:intergenic | 45.0% |
| CCTGAAATCAATCCCATGCA+TGG | - | chr5_3:47563806-47563825 | Msa0814940:intron | 45.0% | |
| AAACTTATATGGGGACCACC+AGG | - | chr5_3:47564189-47564208 | Msa0814940:intron | 45.0% | |
| AACTTATATGGGGACCACCA+GGG | - | chr5_3:47564190-47564209 | Msa0814940:intron | 45.0% | |
| ! | TGCTATTTGGCAATGGCAAG+AGG | - | chr5_3:47564382-47564401 | Msa0814940:intron | 45.0% |
| GCTTTGATCCAAATACCGGA+TGG | - | chr5_3:47564475-47564494 | Msa0814940:three_prime_UTR | 45.0% | |
| TTAGTCTCCCATCCGGTATT+TGG | + | chr5_3:47564486-47564505 | None:intergenic | 45.0% | |
| ! | TAGCAAGTTAGTCTCCCATC+CGG | + | chr5_3:47564493-47564512 | None:intergenic | 45.0% |
| GCCAACATCTCTCATTTCAC+TGG | - | chr5_3:47564650-47564669 | Msa0814940:intron | 45.0% | |
| TGGGATCAAGAGAGTTCAAG+TGG | - | chr5_3:47564875-47564894 | Msa0814940:intron | 45.0% | |
| GAAACTAATTGGCCCAGCAA+AGG | - | chr5_3:47564953-47564972 | Msa0814940:intron | 45.0% | |
| CATCTCCGATTAGGATGCAA+CGG | + | chr5_3:47565067-47565086 | None:intergenic | 45.0% | |
| GTTGTCTCTCATCTCCGATT+AGG | + | chr5_3:47565076-47565095 | None:intergenic | 45.0% | |
| CACGGGAACAAGCTAATGAA+AGG | + | chr5_3:47565302-47565321 | None:intergenic | 45.0% | |
| CCGTGCAAAGAGTTCTATGA+TGG | - | chr5_3:47565317-47565336 | Msa0814940:intron | 45.0% | |
| GCCATGGGTAAAGAGCAATT+TGG | - | chr5_3:47565434-47565453 | Msa0814940:intron | 45.0% | |
| TGCATGGAAGCCGAAATCTT+AGG | - | chr5_3:47565559-47565578 | Msa0814940:intron | 45.0% | |
| TTGTTCTGCCAGTGTTCATG+AGG | - | chr5_3:47565627-47565646 | Msa0814940:intron | 45.0% | |
| GGAAATTGAGCAGTACACTC+GGG | - | chr5_3:47565715-47565734 | Msa0814940:intron | 45.0% | |
| !! | TGATGGTTTTCAAGGTGGTG+AGG | - | chr5_3:47565775-47565794 | Msa0814940:intron | 45.0% |
| ACCGTGAGATCTAATGGTAC+TGG | - | chr5_3:47565818-47565837 | Msa0814940:intron | 45.0% | |
| AGAGGACAAAAAATTGGCCC+GGG | - | chr5_3:47566078-47566097 | Msa0814940:intron | 45.0% | |
| TCTGTTCCAGATTCAACGAC+TGG | - | chr5_3:47566114-47566133 | Msa0814940:intron | 45.0% | |
| CCTAAACGCCGTTTCTTGAA+TGG | + | chr5_3:47566154-47566173 | None:intergenic | 45.0% | |
| CCATTCAAGAAACGGCGTTT+AGG | - | chr5_3:47566151-47566170 | Msa0814940:intron | 45.0% | |
| TTCAAGAAACGGCGTTTAGG+AGG | - | chr5_3:47566154-47566173 | Msa0814940:intron | 45.0% | |
| TCAAGAAACGGCGTTTAGGA+GGG | - | chr5_3:47566155-47566174 | Msa0814940:intron | 45.0% | |
| AACTACTTTCTCTAGGCGAG+TGG | - | chr5_3:47566201-47566220 | Msa0814940:intron | 45.0% | |
| GTGAATGTTTGGATGAGCGA+TGG | - | chr5_3:47566240-47566259 | Msa0814940:intron | 45.0% | |
| ! | CGATGGGTTTCTCTAAACCA+TGG | - | chr5_3:47566257-47566276 | Msa0814940:intron | 45.0% |
| CGGAAAATACATACCGACGG+TGG | + | chr5_3:47560577-47560596 | None:intergenic | 50.0% | |
| CGCTTTGTGACAAAGGTTGG+AGG | - | chr5_3:47560929-47560948 | Msa0814940:intron | 50.0% | |
| GCGCATGAGGGTTCTTTCAT+AGG | + | chr5_3:47562135-47562154 | None:intergenic | 50.0% | |
| TGTACTCTCTTGGACCCTAG+AGG | - | chr5_3:47562734-47562753 | Msa0814940:three_prime_UTR | 50.0% | |
| TAGTCCCCTCATGTTTGCTC+AGG | - | chr5_3:47563033-47563052 | Msa0814940:three_prime_UTR | 50.0% | |
| GCAATGAGATCTCCTGACAC+AGG | + | chr5_3:47563561-47563580 | None:intergenic | 50.0% | |
| CCGTATCGCCTATGTTAAGG+AGG | - | chr5_3:47563638-47563657 | Msa0814940:intron | 50.0% | |
| ! | GAAGACCGACTATCTGGTTC+AGG | + | chr5_3:47564063-47564082 | None:intergenic | 50.0% |
| !! | TTAGTTTTCCCTGTCCCTGG+TGG | + | chr5_3:47564207-47564226 | None:intergenic | 50.0% |
| !! | GTCTTAGTTTTCCCTGTCCC+TGG | + | chr5_3:47564210-47564229 | None:intergenic | 50.0% |
| TGGAGCGCAAGTCAATGTTC+TGG | + | chr5_3:47564271-47564290 | None:intergenic | 50.0% | |
| CAATTTCGCAGGTGGCAAGT+CGG | - | chr5_3:47564301-47564320 | Msa0814940:intron | 50.0% | |
| AGGTGGCAAGTCGGTTGAAT+AGG | - | chr5_3:47564310-47564329 | Msa0814940:intron | 50.0% | |
| !! | CTTGAATTTGGCTTGCCCGA+TGG | + | chr5_3:47564730-47564749 | None:intergenic | 50.0% |
| ATGTGGCTATGACTAGGGCT+AGG | - | chr5_3:47565876-47565895 | Msa0814940:intron | 50.0% | |
| ACGGCGTTTAGGAGGGAAAA+TGG | - | chr5_3:47566162-47566181 | Msa0814940:intron | 50.0% | |
| CGGCGTTTAGGAGGGAAAAT+GGG | - | chr5_3:47566163-47566182 | Msa0814940:intron | 50.0% | |
| TGGCGGAGAAGCAACAAGCT+AGG | + | chr5_3:47560503-47560522 | None:intergenic | 55.0% | |
| ACTTCAAGCCATCACTGCGC+CGG | - | chr5_3:47560542-47560561 | Msa0814940:intron | 55.0% | |
| TGTACTCTCATGGACCCTCG+AGG | - | chr5_3:47562419-47562438 | Msa0814940:three_prime_UTR | 55.0% | |
| GGAGGCAGCCTATGTTAAGC+AGG | - | chr5_3:47563656-47563675 | Msa0814940:intron | 55.0% | |
| GCCTGCCTGAACCAGATAGT+CGG | - | chr5_3:47564055-47564074 | Msa0814940:intron | 55.0% | |
| ! | ACCGACTATCTGGTTCAGGC+AGG | + | chr5_3:47564059-47564078 | None:intergenic | 55.0% |
| !! | GCACTGGCTTCACCTTTGCT+GGG | + | chr5_3:47564968-47564987 | None:intergenic | 55.0% |
| !! | TGCACTGGCTTCACCTTTGC+TGG | + | chr5_3:47564969-47564988 | None:intergenic | 55.0% |
| CTCCGCCGTTGCATCCTAAT+CGG | - | chr5_3:47565059-47565078 | Msa0814940:intron | 55.0% | |
| CTCCGATTAGGATGCAACGG+CGG | + | chr5_3:47565064-47565083 | None:intergenic | 55.0% | |
| ATATGGGGACCACCAGGGAC+AGG | - | chr5_3:47564195-47564214 | Msa0814940:intron | 60.0% | |
| TATGGGGACCACCAGGGACA+GGG | - | chr5_3:47564196-47564215 | Msa0814940:intron | 60.0% | |
| CGGAGACCGGACAGCTGTAA+TGG | + | chr5_3:47565044-47565063 | None:intergenic | 60.0% | |
| TAGGATGCAACGGCGGAGAC+CGG | + | chr5_3:47565057-47565076 | None:intergenic | 60.0% | |
| GACGATCTCCGGCGCAGTGA+TGG | + | chr5_3:47560553-47560572 | None:intergenic | 65.0% | |
| CCGACGGTGGAGACGATCTC+CGG | + | chr5_3:47560564-47560583 | None:intergenic | 65.0% | |
| CCGGAGATCGTCTCCACCGT+CGG | - | chr5_3:47560561-47560580 | Msa0814940:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_3 | gene | 47560390 | 47566474 | 47560390 | ID=Msa0814940;Name=Msa0814940 |
| chr5_3 | mRNA | 47560390 | 47566474 | 47560390 | ID=Msa0814940-mRNA-1;Parent=Msa0814940;Name=Msa0814940-mRNA-1;_AED=0.13;_eAED=0.14;_QI=0|1|0.88|1|0.75|0.66|9|2676|87 |
| chr5_3 | exon | 47560390 | 47560428 | 47560390 | ID=Msa0814940-mRNA-1:exon:14392;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47560615 | 47560894 | 47560615 | ID=Msa0814940-mRNA-1:exon:14391;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47560967 | 47561225 | 47560967 | ID=Msa0814940-mRNA-1:exon:14390;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47561337 | 47561661 | 47561337 | ID=Msa0814940-mRNA-1:exon:14389;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47561746 | 47562831 | 47561746 | ID=Msa0814940-mRNA-1:exon:14388;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47563001 | 47563555 | 47563001 | ID=Msa0814940-mRNA-1:exon:14387;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47564391 | 47564510 | 47564391 | ID=Msa0814940-mRNA-1:exon:14386;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47565914 | 47565996 | 47565914 | ID=Msa0814940-mRNA-1:exon:14385;Parent=Msa0814940-mRNA-1 |
| chr5_3 | exon | 47566282 | 47566474 | 47566282 | ID=Msa0814940-mRNA-1:exon:14384;Parent=Msa0814940-mRNA-1 |
| chr5_3 | CDS | 47566282 | 47566474 | 47566282 | ID=Msa0814940-mRNA-1:cds;Parent=Msa0814940-mRNA-1 |
| chr5_3 | CDS | 47565926 | 47565996 | 47565926 | ID=Msa0814940-mRNA-1:cds;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47565914 | 47565925 | 47565914 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47564391 | 47564510 | 47564391 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47563001 | 47563555 | 47563001 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47561746 | 47562831 | 47561746 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47561337 | 47561661 | 47561337 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47560967 | 47561225 | 47560967 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47560615 | 47560894 | 47560615 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| chr5_3 | three_prime_UTR | 47560390 | 47560428 | 47560390 | ID=Msa0814940-mRNA-1:three_prime_utr;Parent=Msa0814940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
