Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777850 | AES99078.2 | 81.288 | 823 | 114 | 5 | 1 | 812 | 85 | 878 | 0.0 | 1355 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777850 | sp|Q00416|SEN1_YEAST | 29.664 | 654 | 350 | 24 | 163 | 782 | 1279 | 1856 | 1.92e-56 | 215 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777850 | G7KFP1 | 81.288 | 823 | 114 | 5 | 1 | 812 | 85 | 878 | 0.0 | 1355 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0011170 | Msa0777850 | 0.804816 | 1.801014e-49 | -8.615850e-47 |
| Msa0014710 | Msa0777850 | 0.815929 | 7.186763e-52 | -8.615850e-47 |
| Msa0017510 | Msa0777850 | 0.858433 | 8.266893e-63 | -8.615850e-47 |
| Msa0028640 | Msa0777850 | 0.814330 | 1.627376e-51 | -8.615850e-47 |
| Msa0107020 | Msa0777850 | 0.804698 | 1.906587e-49 | -8.615850e-47 |
| Msa0112750 | Msa0777850 | 0.809306 | 2.019580e-50 | -8.615850e-47 |
| Msa0114060 | Msa0777850 | 0.811962 | 5.384491e-51 | -8.615850e-47 |
| Msa0610430 | Msa0777850 | 0.812516 | 4.077074e-51 | -8.615850e-47 |
| Msa0616160 | Msa0777850 | 0.802716 | 4.916284e-49 | -8.615850e-47 |
| Msa0626090 | Msa0777850 | 0.803370 | 3.600960e-49 | -8.615850e-47 |
| Msa0648880 | Msa0777850 | 0.802254 | 6.120403e-49 | -8.615850e-47 |
| Msa0657970 | Msa0777850 | 0.845854 | 3.131339e-59 | -8.615850e-47 |
| Msa0661870 | Msa0777850 | 0.827988 | 1.153861e-54 | -8.615850e-47 |
| Msa0673460 | Msa0777850 | 0.802577 | 5.250826e-49 | -8.615850e-47 |
| Msa0691380 | Msa0777850 | 0.802750 | 4.836684e-49 | -8.615850e-47 |
| Msa0693380 | Msa0777850 | 0.813170 | 2.931331e-51 | -8.615850e-47 |
| Msa0697030 | Msa0777850 | 0.807724 | 4.394060e-50 | -8.615850e-47 |
| Msa0697060 | Msa0777850 | 0.803539 | 3.322203e-49 | -8.615850e-47 |
| Msa0701900 | Msa0777850 | 0.804554 | 2.042900e-49 | -8.615850e-47 |
| Msa0726140 | Msa0777850 | 0.801993 | 6.927548e-49 | -8.615850e-47 |
| Msa0733380 | Msa0777850 | 0.800750 | 1.244549e-48 | -8.615850e-47 |
| Msa0735170 | Msa0777850 | 0.803471 | 3.431680e-49 | -8.615850e-47 |
| Msa0736000 | Msa0777850 | 0.919167 | 6.315894e-87 | -8.615850e-47 |
| Msa0736060 | Msa0777850 | 0.819091 | 1.392911e-52 | -8.615850e-47 |
| Msa0743720 | Msa0777850 | 0.812055 | 5.140256e-51 | -8.615850e-47 |
| Msa0745790 | Msa0777850 | 0.817002 | 4.133556e-52 | -8.615850e-47 |
| Msa0759410 | Msa0777850 | 0.832611 | 8.564373e-56 | -8.615850e-47 |
| Msa0766630 | Msa0777850 | 0.843744 | 1.160559e-58 | -8.615850e-47 |
| Msa0777790 | Msa0777850 | 0.953585 | 1.984470e-111 | -8.615850e-47 |
| Msa0777850 | Msa0777930 | 0.839171 | 1.858528e-57 | -8.615850e-47 |
| Msa0777850 | Msa0789250 | 0.813399 | 2.610967e-51 | -8.615850e-47 |
| Msa0777850 | Msa0796700 | 0.805804 | 1.118300e-49 | -8.615850e-47 |
| Msa0777850 | Msa0801760 | 0.816883 | 4.394884e-52 | -8.615850e-47 |
| Msa0777850 | Msa0806090 | 0.807114 | 5.921571e-50 | -8.615850e-47 |
| Msa0777850 | Msa0811080 | 0.808356 | 3.223685e-50 | -8.615850e-47 |
| Msa0777850 | Msa0814940 | 0.829408 | 5.235116e-55 | -8.615850e-47 |
| Msa0777850 | Msa0815080 | 0.872491 | 3.054287e-67 | -8.615850e-47 |
| Msa0777850 | Msa0815120 | 0.807249 | 5.542452e-50 | -8.615850e-47 |
| Msa0777850 | Msa0815140 | 0.899439 | 1.980513e-77 | -8.615850e-47 |
| Msa0777850 | Msa0820840 | 0.810837 | 9.450806e-51 | -8.615850e-47 |
| Msa0777850 | Msa0822870 | 0.805619 | 1.223019e-49 | -8.615850e-47 |
| Msa0777850 | Msa0827040 | 0.802487 | 5.480925e-49 | -8.615850e-47 |
| Msa0777850 | Msa0840820 | 0.804921 | 1.712446e-49 | -8.615850e-47 |
| Msa0777850 | Msa0844240 | 0.803312 | 3.701741e-49 | -8.615850e-47 |
| Msa0777850 | Msa0858840 | 0.806658 | 7.391900e-50 | -8.615850e-47 |
| Msa0777850 | Msa0861120 | 0.805407 | 1.354730e-49 | -8.615850e-47 |
| Msa0777850 | Msa0871270 | 0.810856 | 9.362065e-51 | -8.615850e-47 |
| Msa0777850 | Msa0880140 | 0.857083 | 2.078724e-62 | -8.615850e-47 |
| Msa0777850 | Msa0885280 | 0.817329 | 3.489632e-52 | -8.615850e-47 |
| Msa0777850 | Msa0885290 | 0.800022 | 1.751067e-48 | -8.615850e-47 |
| Msa0777850 | Msa0897880 | 0.814451 | 1.530561e-51 | -8.615850e-47 |
| Msa0777850 | Msa0907070 | 0.816706 | 4.817166e-52 | -8.615850e-47 |
| Msa0777850 | Msa0907260 | 0.813168 | 2.933831e-51 | -8.615850e-47 |
| Msa0777850 | Msa0909120 | 0.818478 | 1.919233e-52 | -8.615850e-47 |
| Msa0777850 | Msa0909140 | 0.822374 | 2.451813e-53 | -8.615850e-47 |
| Msa0777850 | Msa0918220 | 0.808653 | 2.786903e-50 | -8.615850e-47 |
| Msa0777850 | Msa0935910 | 0.807020 | 6.196902e-50 | -8.615850e-47 |
| Msa0777850 | Msa0938210 | 0.818531 | 1.867020e-52 | -8.615850e-47 |
| Msa0777850 | Msa0938220 | 0.818138 | 2.292279e-52 | -8.615850e-47 |
| Msa0777850 | Msa0942200 | 0.812650 | 3.811191e-51 | -8.615850e-47 |
| Msa0777850 | Msa0959770 | 0.823233 | 1.546354e-53 | -8.615850e-47 |
| Msa0777850 | Msa0969450 | 0.838751 | 2.386720e-57 | -8.615850e-47 |
| Msa0777850 | Msa0969520 | 0.812910 | 3.341642e-51 | -8.615850e-47 |
| Msa0777850 | Msa0975220 | 0.809097 | 2.239066e-50 | -8.615850e-47 |
| Msa0777850 | Msa0975340 | 0.809636 | 1.715746e-50 | -8.615850e-47 |
| Msa0777850 | Msa0993290 | 0.802395 | 5.725676e-49 | -8.615850e-47 |
| Msa0777850 | Msa0993600 | 0.803849 | 2.865001e-49 | -8.615850e-47 |
| Msa0777850 | Msa0998690 | 0.807516 | 4.865986e-50 | -8.615850e-47 |
| Msa0777850 | Msa1003620 | 0.807786 | 4.264149e-50 | -8.615850e-47 |
| Msa0777850 | Msa1014540 | 0.864862 | 8.956152e-65 | -8.615850e-47 |
| Msa0777850 | Msa1024240 | 0.814231 | 1.711583e-51 | -8.615850e-47 |
| Msa0777850 | Msa1030970 | 0.824067 | 9.868080e-54 | -8.615850e-47 |
| Msa0777850 | Msa1075220 | -0.806581 | 7.674956e-50 | -8.615850e-47 |
| Msa0777850 | Msa1075540 | 0.827313 | 1.675914e-54 | -8.615850e-47 |
| Msa0777850 | Msa1079180 | 0.825779 | 3.891546e-54 | -8.615850e-47 |
| Msa0777850 | Msa1082500 | 0.835542 | 1.579627e-56 | -8.615850e-47 |
| Msa0777850 | Msa1085200 | 0.815257 | 1.014411e-51 | -8.615850e-47 |
| Msa0777850 | Msa1085300 | 0.803753 | 2.998547e-49 | -8.615850e-47 |
| Msa0777850 | Msa1136090 | 0.804277 | 2.333187e-49 | -8.615850e-47 |
| Msa0777850 | Msa1160670 | 0.830241 | 3.281076e-55 | -8.615850e-47 |
| Msa0777850 | Msa1162550 | -0.806109 | 9.647037e-50 | -8.615850e-47 |
| Msa0777850 | Msa1165540 | 0.822323 | 2.518971e-53 | -8.615850e-47 |
| Msa0777850 | Msa1179770 | 0.800015 | 1.757074e-48 | -8.615850e-47 |
| Msa0777850 | Msa1186060 | 0.810659 | 1.032868e-50 | -8.615850e-47 |
| Msa0777850 | Msa1189430 | 0.810052 | 1.395871e-50 | -8.615850e-47 |
| Msa0777850 | Msa1222970 | 0.804783 | 1.830125e-49 | -8.615850e-47 |
| Msa0777850 | Msa1226660 | 0.818855 | 1.576532e-52 | -8.615850e-47 |
| Msa0777850 | Msa1228210 | 0.808608 | 2.848951e-50 | -8.615850e-47 |
| Msa0777850 | Msa1228590 | 0.811235 | 7.747687e-51 | -8.615850e-47 |
| Msa0777850 | Msa1242220 | 0.817411 | 3.344252e-52 | -8.615850e-47 |
| Msa0777850 | Msa1244250 | 0.818478 | 1.919619e-52 | -8.615850e-47 |
| Msa0777850 | Msa1252140 | 0.823631 | 1.248246e-53 | -8.615850e-47 |
| Msa0777850 | Msa1253000 | 0.802575 | 5.257686e-49 | -8.615850e-47 |
| Msa0777850 | Msa1269230 | 0.810558 | 1.086146e-50 | -8.615850e-47 |
| Msa0777850 | Msa1271280 | 0.804268 | 2.344160e-49 | -8.615850e-47 |
| Msa0777850 | Msa1271290 | 0.830717 | 2.510007e-55 | -8.615850e-47 |
| Msa0777850 | Msa1271300 | 0.804575 | 2.022639e-49 | -8.615850e-47 |
| Msa0777850 | Msa1283860 | 0.839896 | 1.204462e-57 | -8.615850e-47 |
| Msa0777850 | Msa1284680 | 0.827798 | 1.282052e-54 | -8.615850e-47 |
| Msa0777850 | Msa1306850 | 0.812832 | 3.476171e-51 | -8.615850e-47 |
| Msa0777850 | Msa1308380 | 0.829367 | 5.356627e-55 | -8.615850e-47 |
| Msa0777850 | Msa1320410 | 0.812084 | 5.065194e-51 | -8.615850e-47 |
| Msa0777850 | Msa1322890 | 0.828870 | 7.069405e-55 | -8.615850e-47 |
| Msa0777850 | Msa1324500 | 0.810740 | 9.920694e-51 | -8.615850e-47 |
| Msa0777850 | Msa1324550 | 0.814419 | 1.555559e-51 | -8.615850e-47 |
| Msa0777850 | Msa1324780 | 0.870302 | 1.617616e-66 | -8.615850e-47 |
| Msa0777850 | Msa1327050 | 0.806363 | 8.529874e-50 | -8.615850e-47 |
| Msa0777850 | Msa1359040 | 0.811834 | 5.742881e-51 | -8.615850e-47 |
| Msa0777850 | Msa1360060 | 0.819763 | 9.790949e-53 | -8.615850e-47 |
| Msa0777850 | Msa1367080 | 0.817885 | 2.614162e-52 | -8.615850e-47 |
| Msa0777850 | Msa1372760 | 0.827805 | 1.276800e-54 | -8.615850e-47 |
| Msa0777850 | Msa1373010 | 0.819977 | 8.745238e-53 | -8.615850e-47 |
| Msa0777850 | Msa1373030 | 0.814058 | 1.869159e-51 | -8.615850e-47 |
| Msa0777850 | Msa1378760 | 0.809418 | 1.910935e-50 | -8.615850e-47 |
| Msa0777850 | Msa1384350 | 0.804610 | 1.989276e-49 | -8.615850e-47 |
| Msa0777850 | Msa1390050 | 0.817818 | 2.706943e-52 | -8.615850e-47 |
| Msa0777850 | Msa1392260 | 0.812591 | 3.924607e-51 | -8.615850e-47 |
| Msa0777850 | Msa1409870 | 0.811690 | 6.170227e-51 | -8.615850e-47 |
| Msa0777850 | Msa1411020 | 0.805666 | 1.195837e-49 | -8.615850e-47 |
| Msa0777850 | Msa1423390 | 0.800244 | 1.578098e-48 | -8.615850e-47 |
| Msa0777850 | Msa1424290 | 0.800371 | 1.487321e-48 | -8.615850e-47 |
| Msa0777850 | Msa1424450 | 0.800288 | 1.545854e-48 | -8.615850e-47 |
| Msa0777850 | Msa1429900 | 0.813440 | 2.556477e-51 | -8.615850e-47 |
| Msa0777850 | Msa1434350 | 0.803187 | 3.928721e-49 | -8.615850e-47 |
| Msa0777850 | Msa1438250 | 0.863294 | 2.758126e-64 | -8.615850e-47 |
| Msa0777850 | Msa1439320 | 0.802557 | 5.302888e-49 | -8.615850e-47 |
| Msa0777850 | Msa1440810 | 0.800611 | 1.328656e-48 | -8.615850e-47 |
| Msa0777850 | Msa1452240 | 0.812260 | 4.635299e-51 | -8.615850e-47 |
| Msa0777850 | Msa1460240 | 0.810801 | 9.619972e-51 | -8.615850e-47 |
| Msa0777850 | Msa1464940 | 0.809550 | 1.790512e-50 | -8.615850e-47 |
| Msa0777850 | Msa1466540 | 0.809509 | 1.827194e-50 | -8.615850e-47 |
| Msa0140780 | Msa0777850 | 0.814342 | 1.617377e-51 | -8.615850e-47 |
| Msa0153910 | Msa0777850 | 0.813435 | 2.563437e-51 | -8.615850e-47 |
| Msa0157290 | Msa0777850 | 0.857285 | 1.811730e-62 | -8.615850e-47 |
| Msa0165210 | Msa0777850 | 0.805046 | 1.612547e-49 | -8.615850e-47 |
| Msa0173990 | Msa0777850 | 0.800055 | 1.724452e-48 | -8.615850e-47 |
| Msa0188830 | Msa0777850 | 0.810268 | 1.254157e-50 | -8.615850e-47 |
| Msa0200260 | Msa0777850 | 0.841629 | 4.232607e-58 | -8.615850e-47 |
| Msa0214300 | Msa0777850 | 0.819535 | 1.103986e-52 | -8.615850e-47 |
| Msa0220740 | Msa0777850 | 0.808592 | 2.870680e-50 | -8.615850e-47 |
| Msa0366970 | Msa0777850 | 0.811691 | 6.169799e-51 | -8.615850e-47 |
| Msa0373160 | Msa0777850 | 0.807990 | 3.857907e-50 | -8.615850e-47 |
| Msa0373930 | Msa0777850 | 0.801327 | 9.487618e-49 | -8.615850e-47 |
| Msa0380740 | Msa0777850 | 0.800644 | 1.308658e-48 | -8.615850e-47 |
| Msa0395790 | Msa0777850 | 0.815849 | 7.485746e-52 | -8.615850e-47 |
| Msa0397750 | Msa0777850 | 0.819811 | 9.546007e-53 | -8.615850e-47 |
| Msa0398710 | Msa0777850 | 0.812362 | 4.403799e-51 | -8.615850e-47 |
| Msa0401790 | Msa0777850 | 0.811917 | 5.507495e-51 | -8.615850e-47 |
| Msa0402290 | Msa0777850 | 0.817450 | 3.277348e-52 | -8.615850e-47 |
| Msa0406120 | Msa0777850 | 0.812062 | 5.120629e-51 | -8.615850e-47 |
| Msa0410650 | Msa0777850 | 0.811154 | 8.067200e-51 | -8.615850e-47 |
| Msa0417100 | Msa0777850 | 0.812485 | 4.141353e-51 | -8.615850e-47 |
| Msa0432300 | Msa0777850 | 0.801540 | 8.579452e-49 | -8.615850e-47 |
| Msa0437990 | Msa0777850 | 0.837423 | 5.243337e-57 | -8.615850e-47 |
| Msa0440750 | Msa0777850 | 0.816649 | 4.958815e-52 | -8.615850e-47 |
| Msa0452620 | Msa0777850 | 0.804054 | 2.597409e-49 | -8.615850e-47 |
| Msa0464680 | Msa0777850 | 0.802764 | 4.805202e-49 | -8.615850e-47 |
| Msa0480980 | Msa0777850 | 0.821163 | 4.671635e-53 | -8.615850e-47 |
| Msa0243100 | Msa0777850 | 0.835494 | 1.623720e-56 | -8.615850e-47 |
| Msa0243460 | Msa0777850 | 0.806590 | 7.639234e-50 | -8.615850e-47 |
| Msa0244860 | Msa0777850 | 0.803823 | 2.900743e-49 | -8.615850e-47 |
| Msa0257460 | Msa0777850 | 0.800736 | 1.253167e-48 | -8.615850e-47 |
| Msa0261340 | Msa0777850 | 0.803331 | 3.668174e-49 | -8.615850e-47 |
| Msa0283450 | Msa0777850 | 0.812487 | 4.135593e-51 | -8.615850e-47 |
| Msa0287650 | Msa0777850 | 0.808256 | 3.386788e-50 | -8.615850e-47 |
| Msa0288100 | Msa0777850 | 0.819210 | 1.309225e-52 | -8.615850e-47 |
| Msa0291540 | Msa0777850 | 0.818746 | 1.669258e-52 | -8.615850e-47 |
| Msa0309770 | Msa0777850 | 0.803253 | 3.807166e-49 | -8.615850e-47 |
| Msa0332000 | Msa0777850 | 0.803812 | 2.915725e-49 | -8.615850e-47 |
| Msa0340450 | Msa0777850 | 0.804166 | 2.461067e-49 | -8.615850e-47 |
| Msa0345970 | Msa0777850 | 0.825570 | 4.361352e-54 | -8.615850e-47 |
| Msa0355220 | Msa0777850 | 0.804226 | 2.391866e-49 | -8.615850e-47 |
| Msa0484780 | Msa0777850 | 0.819196 | 1.318820e-52 | -8.615850e-47 |
| Msa0500360 | Msa0777850 | 0.822384 | 2.438118e-53 | -8.615850e-47 |
| Msa0503580 | Msa0777850 | 0.822388 | 2.432596e-53 | -8.615850e-47 |
| Msa0507680 | Msa0777850 | 0.815515 | 8.887257e-52 | -8.615850e-47 |
| Msa0512900 | Msa0777850 | 0.825646 | 4.183950e-54 | -8.615850e-47 |
| Msa0514030 | Msa0777850 | 0.811169 | 8.006560e-51 | -8.615850e-47 |
| Msa0532350 | Msa0777850 | 0.813366 | 2.655055e-51 | -8.615850e-47 |
| Msa0533070 | Msa0777850 | 0.808861 | 2.515749e-50 | -8.615850e-47 |
| Msa0545200 | Msa0777850 | 0.807290 | 5.433940e-50 | -8.615850e-47 |
| Msa0558640 | Msa0777850 | 0.803514 | 3.362494e-49 | -8.615850e-47 |
| Msa0558690 | Msa0777850 | 0.809573 | 1.770154e-50 | -8.615850e-47 |
| Msa0563840 | Msa0777850 | 0.805391 | 1.365776e-49 | -8.615850e-47 |
| Msa0569500 | Msa0777850 | 0.812531 | 4.045886e-51 | -8.615850e-47 |
| Msa0581760 | Msa0777850 | 0.818393 | 2.006466e-52 | -8.615850e-47 |
| Msa0585300 | Msa0777850 | 0.817768 | 2.778432e-52 | -8.615850e-47 |
| Msa0593650 | Msa0777850 | 0.802844 | 4.626415e-49 | -8.615850e-47 |
| Msa0602390 | Msa0777850 | 0.811399 | 7.139387e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777850 | MtrunA17_Chr5g0433361 | 81.288 | 823 | 114 | 5 | 1 | 812 | 85 | 878 | 0.0 | 1355 |
| Msa0777850 | MtrunA17_Chr5g0433471 | 56.566 | 891 | 246 | 13 | 1 | 811 | 77 | 906 | 0.0 | 905 |
| Msa0777850 | MtrunA17_Chr3g0109541 | 49.274 | 895 | 313 | 17 | 1 | 811 | 70 | 907 | 0.0 | 773 |
| Msa0777850 | MtrunA17_Chr5g0433321 | 48.698 | 883 | 310 | 15 | 1 | 811 | 72 | 883 | 0.0 | 761 |
| Msa0777850 | MtrunA17_Chr5g0433371 | 48.889 | 900 | 306 | 16 | 1 | 811 | 73 | 907 | 0.0 | 749 |
| Msa0777850 | MtrunA17_Chr5g0433421 | 69.683 | 442 | 108 | 4 | 385 | 811 | 561 | 991 | 0.0 | 602 |
| Msa0777850 | MtrunA17_Chr5g0433421 | 56.417 | 374 | 105 | 8 | 1 | 371 | 72 | 390 | 1.90e-116 | 377 |
| Msa0777850 | MtrunA17_Chr5g0433511 | 66.290 | 442 | 104 | 7 | 385 | 811 | 495 | 906 | 2.88e-180 | 543 |
| Msa0777850 | MtrunA17_Chr5g0433511 | 55.556 | 387 | 110 | 8 | 1 | 371 | 67 | 407 | 8.16e-116 | 374 |
| Msa0777850 | MtrunA17_Chr5g0433351 | 62.302 | 443 | 118 | 7 | 1 | 438 | 72 | 470 | 1.02e-174 | 512 |
| Msa0777850 | MtrunA17_Chr3g0094211 | 37.121 | 792 | 381 | 23 | 55 | 792 | 127 | 855 | 1.37e-152 | 473 |
| Msa0777850 | MtrunA17_Chr8g0375181 | 39.161 | 715 | 344 | 17 | 164 | 805 | 256 | 952 | 1.65e-144 | 472 |
| Msa0777850 | MtrunA17_Chr8g0375151 | 35.812 | 874 | 423 | 26 | 4 | 805 | 37 | 844 | 4.55e-143 | 468 |
| Msa0777850 | MtrunA17_Chr8g0375191 | 35.041 | 859 | 434 | 26 | 3 | 804 | 83 | 874 | 1.26e-138 | 455 |
| Msa0777850 | MtrunA17_Chr3g0109551 | 46.050 | 443 | 206 | 5 | 385 | 802 | 499 | 933 | 4.34e-123 | 397 |
| Msa0777850 | MtrunA17_Chr3g0109551 | 37.173 | 382 | 189 | 7 | 4 | 381 | 71 | 405 | 3.49e-60 | 222 |
| Msa0777850 | MtrunA17_Chr5g0433341 | 84.324 | 185 | 27 | 2 | 475 | 658 | 2 | 185 | 4.75e-103 | 316 |
| Msa0777850 | MtrunA17_Chr5g0433331 | 81.879 | 149 | 27 | 0 | 663 | 811 | 1 | 149 | 6.15e-80 | 254 |
| Msa0777850 | MtrunA17_Chr8g0343741 | 38.854 | 314 | 171 | 9 | 475 | 779 | 962 | 1263 | 7.39e-51 | 194 |
| Msa0777850 | MtrunA17_Chr5g0422511 | 36.545 | 301 | 186 | 5 | 483 | 782 | 455 | 751 | 6.68e-46 | 177 |
| Msa0777850 | MtrunA17_Chr1g0173701 | 36.567 | 268 | 165 | 5 | 517 | 782 | 108 | 372 | 3.17e-44 | 165 |
| Msa0777850 | MtrunA17_Chr2g0334291 | 29.944 | 531 | 313 | 16 | 278 | 783 | 1577 | 2073 | 6.76e-44 | 172 |
| Msa0777850 | MtrunA17_Chr5g0400101 | 33.028 | 327 | 198 | 9 | 511 | 829 | 641 | 954 | 9.87e-38 | 152 |
| Msa0777850 | MtrunA17_Chr7g0257921 | 35.599 | 309 | 148 | 13 | 484 | 770 | 348 | 627 | 9.89e-30 | 125 |
| Msa0777850 | MtrunA17_Chr5g0435821 | 51.402 | 107 | 47 | 1 | 699 | 805 | 12 | 113 | 1.63e-28 | 121 |
| Msa0777850 | MtrunA17_Chr1g0165651 | 32.450 | 302 | 171 | 11 | 477 | 759 | 624 | 911 | 1.01e-26 | 117 |
| Msa0777850 | MtrunA17_Chr8g0375871 | 28.435 | 313 | 177 | 9 | 55 | 366 | 124 | 390 | 6.14e-24 | 108 |
| Msa0777850 | MtrunA17_Chr8g0375871 | 42.857 | 140 | 70 | 5 | 446 | 584 | 529 | 659 | 1.20e-21 | 101 |
| Msa0777850 | MtrunA17_Chr8g0375861 | 28.435 | 313 | 177 | 9 | 55 | 366 | 124 | 390 | 6.81e-24 | 108 |
| Msa0777850 | MtrunA17_Chr8g0375861 | 42.857 | 140 | 70 | 5 | 446 | 584 | 529 | 659 | 1.25e-21 | 101 |
| Msa0777850 | MtrunA17_Chr5g0394941 | 33.096 | 281 | 153 | 10 | 511 | 770 | 541 | 807 | 3.24e-23 | 106 |
| Msa0777850 | MtrunA17_Chr2g0304151 | 33.096 | 281 | 153 | 10 | 511 | 770 | 541 | 807 | 3.66e-23 | 105 |
| Msa0777850 | MtrunA17_Chr1g0165031 | 25.794 | 535 | 313 | 23 | 252 | 753 | 892 | 1375 | 6.41e-20 | 95.9 |
| Msa0777850 | MtrunA17_Chr3g0117771 | 31.000 | 200 | 75 | 6 | 1 | 197 | 158 | 297 | 3.44e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0777850 | AT1G65810.2 | 45.036 | 826 | 381 | 18 | 20 | 822 | 89 | 864 | 0.0 | 635 |
| Msa0777850 | AT1G65810.1 | 45.036 | 826 | 381 | 18 | 20 | 822 | 89 | 864 | 0.0 | 635 |
| Msa0777850 | AT1G65810.3 | 45.036 | 826 | 381 | 18 | 20 | 822 | 89 | 864 | 0.0 | 634 |
| Msa0777850 | AT1G65780.1 | 40.046 | 879 | 381 | 18 | 6 | 811 | 71 | 876 | 0.0 | 562 |
| Msa0777850 | AT5G37140.1 | 45.852 | 687 | 313 | 17 | 154 | 798 | 2 | 671 | 0.0 | 551 |
| Msa0777850 | AT5G52090.1 | 45.577 | 667 | 313 | 17 | 170 | 798 | 1 | 655 | 0.0 | 543 |
| Msa0777850 | AT5G37150.1 | 44.196 | 672 | 323 | 16 | 165 | 798 | 161 | 818 | 3.80e-178 | 535 |
| Msa0777850 | AT4G05540.1 | 44.885 | 655 | 291 | 15 | 166 | 765 | 50 | 689 | 1.18e-171 | 513 |
| Msa0777850 | AT5G37165.1 | 48.810 | 420 | 197 | 10 | 399 | 809 | 1 | 411 | 5.34e-127 | 388 |
| Msa0777850 | AT5G37030.1 | 58.503 | 294 | 121 | 1 | 503 | 795 | 343 | 636 | 5.68e-117 | 369 |
| Msa0777850 | AT5G37030.1 | 49.359 | 156 | 74 | 3 | 224 | 377 | 198 | 350 | 3.78e-29 | 124 |
| Msa0777850 | AT4G15570.2 | 28.622 | 566 | 318 | 18 | 228 | 777 | 167 | 662 | 1.19e-52 | 196 |
| Msa0777850 | AT4G15570.4 | 28.622 | 566 | 318 | 18 | 228 | 777 | 167 | 662 | 1.19e-52 | 196 |
| Msa0777850 | AT4G15570.3 | 28.622 | 566 | 318 | 18 | 228 | 777 | 256 | 751 | 2.32e-52 | 196 |
| Msa0777850 | AT4G15570.1 | 28.622 | 566 | 318 | 18 | 228 | 777 | 256 | 751 | 2.32e-52 | 196 |
| Msa0777850 | AT2G19120.1 | 37.742 | 310 | 180 | 8 | 475 | 779 | 742 | 1043 | 3.97e-50 | 191 |
| Msa0777850 | AT4G30100.2 | 36.190 | 315 | 186 | 9 | 475 | 783 | 905 | 1210 | 8.25e-47 | 182 |
| Msa0777850 | AT4G30100.1 | 36.190 | 315 | 186 | 9 | 475 | 783 | 905 | 1210 | 8.25e-47 | 182 |
| Msa0777850 | AT1G16800.1 | 28.352 | 522 | 329 | 16 | 278 | 779 | 1385 | 1881 | 3.10e-42 | 167 |
| Msa0777850 | AT1G16800.3 | 28.352 | 522 | 329 | 16 | 278 | 779 | 1427 | 1923 | 3.44e-42 | 167 |
| Msa0777850 | AT1G16800.2 | 28.352 | 522 | 329 | 16 | 278 | 779 | 1497 | 1993 | 3.46e-42 | 167 |
| Msa0777850 | AT5G37160.1 | 39.496 | 238 | 112 | 5 | 166 | 372 | 180 | 416 | 1.85e-39 | 152 |
| Msa0777850 | AT5G47010.1 | 34.926 | 272 | 168 | 6 | 511 | 779 | 653 | 918 | 7.30e-37 | 150 |
| Msa0777850 | AT2G03270.1 | 34.667 | 300 | 169 | 13 | 482 | 770 | 339 | 622 | 1.75e-26 | 116 |
| Msa0777850 | AT5G35970.1 | 33.446 | 296 | 164 | 12 | 483 | 759 | 638 | 919 | 2.00e-25 | 113 |
| Msa0777850 | AT1G05460.2 | 31.692 | 325 | 168 | 13 | 511 | 811 | 542 | 836 | 3.25e-23 | 106 |
| Msa0777850 | AT1G05460.1 | 31.288 | 326 | 168 | 13 | 511 | 811 | 542 | 836 | 4.05e-23 | 106 |
| Msa0777850 | AT2G38770.1 | 32.946 | 258 | 146 | 11 | 511 | 753 | 1120 | 1365 | 9.09e-19 | 92.4 |
| Msa0777850 | AT1G08840.3 | 28.205 | 273 | 148 | 9 | 512 | 759 | 1053 | 1302 | 3.29e-16 | 84.3 |
| Msa0777850 | AT1G08840.4 | 28.205 | 273 | 148 | 9 | 512 | 759 | 1050 | 1299 | 3.34e-16 | 84.3 |
| Msa0777850 | AT1G08840.2 | 28.205 | 273 | 148 | 9 | 512 | 759 | 1037 | 1286 | 3.72e-16 | 84.0 |
| Msa0777850 | AT1G08840.1 | 28.205 | 273 | 148 | 9 | 512 | 759 | 1018 | 1267 | 4.20e-16 | 84.0 |
Find 145 sgRNAs with CRISPR-Local
Find 210 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAGTCATTTAAGCTTTC+AGG | 0.127572 | 5_2:-57277361 | None:intergenic |
| TTTGAATACAAGAAGATATT+TGG | 0.191015 | 5_2:+57278443 | Msa0777850:CDS |
| ATGCTGATATCAAACTTATA+TGG | 0.207233 | 5_2:+57278045 | Msa0777850:CDS |
| TTAGTCTCCCATCCAGTATT+TGG | 0.221963 | 5_2:-57278350 | None:intergenic |
| TTAGGTGACATTGTGCTATT+TGG | 0.241240 | 5_2:+57278236 | Msa0777850:CDS |
| TGCACTGGCTTCACCTTTGC+TGG | 0.242919 | 5_2:-57278803 | None:intergenic |
| GTAAATGTTCGTTCTGTTGA+TGG | 0.259767 | 5_2:+57279602 | Msa0777850:CDS |
| TGCTCAAGTTTATGAAATTC+AGG | 0.269725 | 5_2:+57279535 | Msa0777850:CDS |
| TCATGTGTGAGGTTGATTTC+AGG | 0.280798 | 5_2:-57277696 | None:intergenic |
| CTCATGTCAATGTTAAATTT+AGG | 0.292464 | 5_2:-57278686 | None:intergenic |
| TCTGATGAAGTTGAAAATAT+TGG | 0.296974 | 5_2:+57277289 | Msa0777850:CDS |
| TTGATAATGGCGGCGTAATA+AGG | 0.299841 | 5_2:-57280565 | None:intergenic |
| ATTCTTCCAGTCGTTGAATC+TGG | 0.301086 | 5_2:-57279964 | None:intergenic |
| GAACTCACTCTTTGGTTCCT+TGG | 0.301576 | 5_2:+57280608 | Msa0777850:CDS |
| AGATACTGTCTTTGGATATT+AGG | 0.305787 | 5_2:+57279812 | Msa0777850:intron |
| TCATAAACTTGAGCATTATA+TGG | 0.306286 | 5_2:-57279527 | None:intergenic |
| AGGCGATACGGTAGGGGTTT+TGG | 0.316658 | 5_2:-57277390 | None:intergenic |
| CAATGCTTTCATCCAAATAC+TGG | 0.327523 | 5_2:+57278338 | Msa0777850:CDS |
| AGCTTGAAACAGCATCTTCT+TGG | 0.329857 | 5_2:-57277998 | None:intergenic |
| GATCATGATACATATGGTTT+AGG | 0.333976 | 5_2:+57278218 | Msa0777850:CDS |
| ATAGCAGACCAATGTGAATT+TGG | 0.341801 | 5_2:+57279040 | Msa0777850:CDS |
| AATATCCATCTTCATGCAAT+TGG | 0.341818 | 5_2:-57277530 | None:intergenic |
| ATGAAGGTAGATCGACTATC+TGG | 0.349186 | 5_2:-57277933 | None:intergenic |
| TTTGTTAGCAAATTTCTTCA+TGG | 0.353735 | 5_2:-57278402 | None:intergenic |
| ATGTCTCATTTCATTGGAAA+TGG | 0.356476 | 5_2:+57278523 | Msa0777850:CDS |
| CTTGATTTGCTAAGGTCTCT+TGG | 0.362091 | 5_2:+57278566 | Msa0777850:CDS |
| AGCTGGGAGAACTCACTCTT+TGG | 0.363151 | 5_2:+57280600 | Msa0777850:CDS |
| ATCAAGATTGGCGCTAAAGC+TGG | 0.364397 | 5_2:+57280583 | Msa0777850:CDS |
| AAGGTCTCTTGGAAATTCCT+TGG | 0.364902 | 5_2:+57278577 | Msa0777850:CDS |
| TGCAAAATTGCAGTATTAGT+TGG | 0.368307 | 5_2:-57278155 | None:intergenic |
| TAATCAACAGTGACTCTGTT+TGG | 0.369827 | 5_2:+57279849 | Msa0777850:CDS |
| CCTAAACGCCGTTTCTTGAA+TGG | 0.370619 | 5_2:-57279995 | None:intergenic |
| AGGTCTCTTGGAAATTCCTT+GGG | 0.371531 | 5_2:+57278578 | Msa0777850:CDS |
| ACATTATTGATCTCACAAAA+AGG | 0.373241 | 5_2:-57277175 | None:intergenic |
| TGCTGATATCAAACTTATAT+GGG | 0.374218 | 5_2:+57278046 | Msa0777850:CDS |
| CATTTGTTGTCATGTTCATA+AGG | 0.376096 | 5_2:-57277657 | None:intergenic |
| GCCAACATGTCTCATTTCAT+TGG | 0.376355 | 5_2:+57278517 | Msa0777850:CDS |
| TACGCCGCCATTATCAAGAT+TGG | 0.380483 | 5_2:+57280571 | Msa0777850:CDS |
| TCATTGCTTTCACACACATT+AGG | 0.388248 | 5_2:+57277338 | Msa0777850:CDS |
| AATATTCATCTTCATGCATT+CGG | 0.392803 | 5_2:-57277587 | None:intergenic |
| TCACTTGATCATGATACATA+TGG | 0.393125 | 5_2:+57278212 | Msa0777850:CDS |
| TATCTGATGCTCCCATTGTC+AGG | 0.393935 | 5_2:+57279182 | Msa0777850:CDS |
| AAGAGTACATTTCTCCTTCA+AGG | 0.396644 | 5_2:-57279228 | None:intergenic |
| TTTAGCGCCAATCTTGATAA+TGG | 0.397655 | 5_2:-57280578 | None:intergenic |
| AGTTATTGATGCTAAGAATA+GGG | 0.406528 | 5_2:+57279880 | Msa0777850:CDS |
| ATATCTACCGTGAGATCTAA+TGG | 0.406558 | 5_2:+57279656 | Msa0777850:CDS |
| CATGTGTGAGGTTGATTTCA+GGG | 0.407399 | 5_2:-57277695 | None:intergenic |
| TGTTGGCATGTGTGTGTGTA+AGG | 0.413125 | 5_2:-57278501 | None:intergenic |
| GCTTGAAACAGCATCTTCTT+GGG | 0.426070 | 5_2:-57277997 | None:intergenic |
| TAGTTATTGATGCTAAGAAT+AGG | 0.429708 | 5_2:+57279879 | Msa0777850:CDS |
| AAGTCTGAAGAACATGGTTC+AGG | 0.431895 | 5_2:+57279303 | Msa0777850:CDS |
| GTTGTCTCTCATCTCCGATT+AGG | 0.431949 | 5_2:-57278910 | None:intergenic |
| AATATAATTAAAACAGTGTT+GGG | 0.435420 | 5_2:+57277718 | Msa0777850:CDS |
| CTCCACCGTTGCATCCTAAT+CGG | 0.437172 | 5_2:+57278896 | Msa0777850:CDS |
| TCGGTTGCATAGGTTAGTTA+TGG | 0.440947 | 5_2:+57278187 | Msa0777850:CDS |
| GGAAATTATAAACCTGTGTC+AGG | 0.444557 | 5_2:+57277310 | Msa0777850:CDS |
| GCTAAGGGTAAAGAGCAATT+TGG | 0.445056 | 5_2:+57279271 | Msa0777850:CDS |
| CTTGATTACCTTCTTAACAT+AGG | 0.451230 | 5_2:-57277410 | None:intergenic |
| AGAAAGACATTGACAAGGCC+TGG | 0.454988 | 5_2:-57278290 | None:intergenic |
| TTCGCACGGGAATAAGCTAA+TGG | 0.459341 | 5_2:-57279140 | None:intergenic |
| TACAGTTCCATCATGACATA+TGG | 0.461642 | 5_2:+57277248 | Msa0777850:CDS |
| GACATTGTGCTATTTGGAAA+TGG | 0.464393 | 5_2:+57278242 | Msa0777850:CDS |
| ATATGGGGACCACCAGGGAC+AGG | 0.468887 | 5_2:+57278062 | Msa0777850:CDS |
| TAGCTTTCTTCCCTGACAAT+GGG | 0.469265 | 5_2:-57279193 | None:intergenic |
| ATCATCCAATTGCATGAAGA+TGG | 0.477710 | 5_2:+57277525 | Msa0777850:CDS |
| GTTTGAAAGACTTGTAATGT+TGG | 0.480465 | 5_2:+57279072 | Msa0777850:CDS |
| AACAATTCCATTACAGCTGT+CGG | 0.482727 | 5_2:+57278871 | Msa0777850:CDS |
| TGGAGACCCGACAGCTGTAA+TGG | 0.484216 | 5_2:-57278878 | None:intergenic |
| GAATATAATTAAAACAGTGT+TGG | 0.489127 | 5_2:+57277717 | Msa0777850:CDS |
| TTCAAGCTCTTGATTTGCTA+AGG | 0.490192 | 5_2:+57278558 | Msa0777850:CDS |
| TGCTATTTGGAAATGGTAAG+AGG | 0.490292 | 5_2:+57278249 | Msa0777850:CDS |
| AGCTATGTTAATAAAAGAAT+AGG | 0.495035 | 5_2:-57279251 | None:intergenic |
| AACAAATGTGGCTATGACTA+GGG | 0.495248 | 5_2:+57279715 | Msa0777850:CDS |
| GGAGTTCAGCAACTCTATCA+TGG | 0.495440 | 5_2:-57278381 | None:intergenic |
| ATAATTAAAAGTCTTTATGA+AGG | 0.499892 | 5_2:+57279343 | Msa0777850:CDS |
| CATGATGGAACTGTATGAAT+TGG | 0.504598 | 5_2:-57277240 | None:intergenic |
| TTTGAAAGACTTGTAATGTT+GGG | 0.506742 | 5_2:+57279073 | Msa0777850:CDS |
| TTGAGTCACCATTCAAGAAA+CGG | 0.508950 | 5_2:+57279987 | Msa0777850:CDS |
| TTAACATAGGCGATACGGTA+GGG | 0.510070 | 5_2:-57277397 | None:intergenic |
| GAACAAATGTGGCTATGACT+AGG | 0.512010 | 5_2:+57279714 | Msa0777850:CDS |
| TGTCAATGTTAAATTTAGGA+AGG | 0.513940 | 5_2:-57278682 | None:intergenic |
| CTTGAATTTGGCTTGCCCCA+AGG | 0.515997 | 5_2:-57278594 | None:intergenic |
| CCGTGCGAAGAGTTCTATGA+TGG | 0.516329 | 5_2:+57279154 | Msa0777850:CDS |
| ACCGTGAGATCTAATGGTAC+TGG | 0.518270 | 5_2:+57279662 | Msa0777850:CDS |
| TGGAGCACATGTCAATGTCC+TGG | 0.518568 | 5_2:-57278135 | None:intergenic |
| CCGTATCGCCTATGTTAAGA+AGG | 0.518702 | 5_2:+57277402 | Msa0777850:CDS |
| CTATGTTAAGAAGGTAATCA+AGG | 0.526997 | 5_2:+57277411 | Msa0777850:CDS |
| AAGGTAATCAAGGCAAGGAA+TGG | 0.530345 | 5_2:+57277421 | Msa0777850:CDS |
| TCAAGATTGGCGCTAAAGCT+GGG | 0.530618 | 5_2:+57280584 | Msa0777850:CDS |
| TCCAATGAAATGAGACATGT+TGG | 0.531006 | 5_2:-57278518 | None:intergenic |
| ACAATTCCATTACAGCTGTC+GGG | 0.533970 | 5_2:+57278872 | Msa0777850:CDS |
| CCTTCTTAACATAGGCGATA+CGG | 0.534776 | 5_2:-57277402 | None:intergenic |
| AAACTTATATGGGGACCACC+AGG | 0.535882 | 5_2:+57278056 | Msa0777850:CDS |
| TCTGTTCCAGATTCAACGAC+TGG | 0.536252 | 5_2:+57279958 | Msa0777850:CDS |
| ACAGAACATTCTTAATAGCC+CGG | 0.537690 | 5_2:-57279940 | None:intergenic |
| GTCAATGTTAAATTTAGGAA+GGG | 0.543604 | 5_2:-57278681 | None:intergenic |
| GTCATGCAAATGCATGAAGA+TGG | 0.544816 | 5_2:+57277468 | Msa0777850:CDS |
| TCTAATGGTACTGGTGATGT+TGG | 0.546314 | 5_2:+57279671 | Msa0777850:CDS |
| GCTTTCATCCAAATACTGGA+TGG | 0.546705 | 5_2:+57278342 | Msa0777850:CDS |
| AGGTGGCAATTCGGTTGCAT+AGG | 0.549979 | 5_2:+57278177 | Msa0777850:CDS |
| TTGTTTCCACAATGCTGAAG+AGG | 0.550324 | 5_2:+57279904 | Msa0777850:CDS |
| AGGAAATTGAGCAGTACACT+CGG | 0.550497 | 5_2:+57279558 | Msa0777850:CDS |
| ATAGCTTTCTTCCCTGACAA+TGG | 0.550979 | 5_2:-57279194 | None:intergenic |
| TAACATAGGCGATACGGTAG+GGG | 0.562252 | 5_2:-57277396 | None:intergenic |
| AAAGTGAACTTAGTATGCTA+AGG | 0.562963 | 5_2:-57278646 | None:intergenic |
| TCTTCAGCCATATGTCATGA+TGG | 0.567416 | 5_2:-57277255 | None:intergenic |
| ATGTGGCTATGACTAGGGCT+AGG | 0.571180 | 5_2:+57279720 | Msa0777850:CDS |
| CTTTCATCCAAATACTGGAT+GGG | 0.573095 | 5_2:+57278343 | Msa0777850:CDS |
| ATCGACTATCTGGTTCAGAC+AGG | 0.573307 | 5_2:-57277923 | None:intergenic |
| GGTAAAGAGCAATTTGGTCA+TGG | 0.575475 | 5_2:+57279277 | Msa0777850:CDS |
| ACAAGGAAGAAAGTTAGCAT+AGG | 0.580771 | 5_2:+57279494 | Msa0777850:CDS |
| CCATCATAGAACTCTTCGCA+CGG | 0.582805 | 5_2:-57279154 | None:intergenic |
| AACCCCAGAATCTAAAACCA+AGG | 0.584042 | 5_2:-57280625 | None:intergenic |
| ACCAGTACCATTAGATCTCA+CGG | 0.585010 | 5_2:-57279663 | None:intergenic |
| ATCTGATGCTCCCATTGTCA+GGG | 0.594382 | 5_2:+57279183 | Msa0777850:CDS |
| CACGGGAATAAGCTAATGGA+AGG | 0.595715 | 5_2:-57279136 | None:intergenic |
| CAGAACATTCTTAATAGCCC+GGG | 0.595796 | 5_2:-57279939 | None:intergenic |
| TTTAATTATATTCATGTGTG+AGG | 0.595989 | 5_2:-57277707 | None:intergenic |
| CATCATAGAACTCTTCGCAC+GGG | 0.599208 | 5_2:-57279153 | None:intergenic |
| ACATTGACAAGGCCTGGATG+AGG | 0.599408 | 5_2:-57278284 | None:intergenic |
| TATGGGGACCACCAGGGACA+GGG | 0.599903 | 5_2:+57278063 | Msa0777850:CDS |
| ATGAAATTAAGTCCTCATCC+AGG | 0.605229 | 5_2:+57278272 | Msa0777850:CDS |
| TGAATATTGAAGATGACTTG+TGG | 0.605497 | 5_2:+57277602 | Msa0777850:CDS |
| CATCTCCGATTAGGATGCAA+CGG | 0.610928 | 5_2:-57278901 | None:intergenic |
| GAAACTAATTGATCCAGCAA+AGG | 0.611704 | 5_2:+57278790 | Msa0777850:CDS |
| TGCCAGTGTTCATGAAGACA+AGG | 0.619804 | 5_2:+57279477 | Msa0777850:intron |
| GGAAATTGAGCAGTACACTC+GGG | 0.620554 | 5_2:+57279559 | Msa0777850:CDS |
| TTAAGAAGGTAATCAAGGCA+AGG | 0.623298 | 5_2:+57277416 | Msa0777850:CDS |
| AAATTTAACATTGACATGAG+AGG | 0.626648 | 5_2:+57278689 | Msa0777850:CDS |
| CTTAACATAGGCGATACGGT+AGG | 0.632234 | 5_2:-57277398 | None:intergenic |
| TACTTCGTCCAAATTCACAT+TGG | 0.633182 | 5_2:-57279048 | None:intergenic |
| AGCGCCAATCTTGATAATGG+CGG | 0.635700 | 5_2:-57280575 | None:intergenic |
| TGGACAAAGTCTGAAGAACA+TGG | 0.636091 | 5_2:+57279297 | Msa0777850:CDS |
| AAATAGACAAAGAACAAATG+TGG | 0.638430 | 5_2:+57279703 | Msa0777850:CDS |
| TTGTAATGTTGGGATACGAA+AGG | 0.638800 | 5_2:+57279083 | Msa0777850:CDS |
| AACTTATATGGGGACCACCA+GGG | 0.643082 | 5_2:+57278057 | Msa0777850:CDS |
| GCTGATATCAAACTTATATG+GGG | 0.644417 | 5_2:+57278047 | Msa0777850:CDS |
| AGATGACTTGCAGAACAACA+AGG | 0.652641 | 5_2:+57277498 | Msa0777850:CDS |
| GCAATGAGATCTCCTGACAC+AGG | 0.658736 | 5_2:-57277322 | None:intergenic |
| GGTCTCTTGGAAATTCCTTG+GGG | 0.661476 | 5_2:+57278579 | Msa0777850:CDS |
| AGTATTCTTACAATTGGACG+CGG | 0.662302 | 5_2:-57277742 | None:intergenic |
| TCAAGTTTATGAAATTCAGG+AGG | 0.663310 | 5_2:+57279538 | Msa0777850:CDS |
| ATTGAATGAGATTCTCTACA+CGG | 0.664980 | 5_2:-57278319 | None:intergenic |
| CTCCGATTAGGATGCAACGG+TGG | 0.685534 | 5_2:-57278898 | None:intergenic |
| TATCGAGAAAGACATTGACA+AGG | 0.728740 | 5_2:-57278295 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATAATTAAAACAGTGTT+GGG | + | chr5_2:57277718-57277737 | Msa0777850:CDS | 15.0% |
| !!! | AAAGTTATTTTTCTTGAATT+TGG | - | chr5_2:57278609-57278628 | None:intergenic | 15.0% |
| !! | ATAATTAAAAGTCTTTATGA+AGG | + | chr5_2:57279343-57279362 | Msa0777850:CDS | 15.0% |
| !! | AACATTCAAACATATTAATT+TGG | - | chr5_2:57280073-57280092 | None:intergenic | 15.0% |
| !! | AATTAATATGTTTGAATGTT+TGG | + | chr5_2:57280073-57280092 | Msa0777850:intron | 15.0% |
| !! | TTTAATTATATTCATGTGTG+AGG | - | chr5_2:57277710-57277729 | None:intergenic | 20.0% |
| !! | GAATATAATTAAAACAGTGT+TGG | + | chr5_2:57277717-57277736 | Msa0777850:CDS | 20.0% |
| !! | GTATGCTATATATTAAATGA+AGG | - | chr5_2:57277790-57277809 | None:intergenic | 20.0% |
| !!! | TTCAAACATAATTTTTCATG+CGG | - | chr5_2:57277818-57277837 | None:intergenic | 20.0% |
| !!! | AATACAAAAAAGCATTAAAC+AGG | - | chr5_2:57277876-57277895 | None:intergenic | 20.0% |
| !! | TTTGAATACAAGAAGATATT+TGG | + | chr5_2:57278443-57278462 | Msa0777850:CDS | 20.0% |
| !! | AGCTATGTTAATAAAAGAAT+AGG | - | chr5_2:57279254-57279273 | None:intergenic | 20.0% |
| !!! | TTCTTTTATTAACATAGCTA+AGG | + | chr5_2:57279255-57279274 | Msa0777850:CDS | 20.0% |
| !!! | TCTTTTATTAACATAGCTAA+GGG | + | chr5_2:57279256-57279275 | Msa0777850:CDS | 20.0% |
| !!! | ATAGTTCTTATTTAAATGCA+TGG | - | chr5_2:57280328-57280347 | None:intergenic | 20.0% |
| !!! | TTAATGAAAGTTTTTTAGTC+TGG | - | chr5_2:57280487-57280506 | None:intergenic | 20.0% |
| ! | ACATTATTGATCTCACAAAA+AGG | - | chr5_2:57277178-57277197 | None:intergenic | 25.0% |
| ! | ATAATGTTCAAAAAACTGCA+TGG | + | chr5_2:57277191-57277210 | Msa0777850:CDS | 25.0% |
| !!! | ATGAATTGGTTTTGATCTTT+TGG | - | chr5_2:57277229-57277248 | None:intergenic | 25.0% |
| ! | TCTGATGAAGTTGAAAATAT+TGG | + | chr5_2:57277289-57277308 | Msa0777850:CDS | 25.0% |
| ! | AATATTCATCTTCATGCATT+CGG | - | chr5_2:57277590-57277609 | None:intergenic | 25.0% |
| !!! | CAAAAGAGTATTCTTACAAT+TGG | - | chr5_2:57277751-57277770 | None:intergenic | 25.0% |
| !! | AATACTCTTTTGATCTGAAT+AGG | + | chr5_2:57277759-57277778 | Msa0777850:intron | 25.0% |
| !! | TCAAACATAATTTTTCATGC+GGG | - | chr5_2:57277817-57277836 | None:intergenic | 25.0% |
| !! | TATCATGTCTTCTTTTATGA+AGG | - | chr5_2:57277952-57277971 | None:intergenic | 25.0% |
| ! | ATGCTGATATCAAACTTATA+TGG | + | chr5_2:57278045-57278064 | Msa0777850:CDS | 25.0% |
| ! | TGCTGATATCAAACTTATAT+GGG | + | chr5_2:57278046-57278065 | Msa0777850:CDS | 25.0% |
| ! | TTTGTTAGCAAATTTCTTCA+TGG | - | chr5_2:57278405-57278424 | None:intergenic | 25.0% |
| ! | GTCAATGTTAAATTTAGGAA+GGG | - | chr5_2:57278684-57278703 | None:intergenic | 25.0% |
| ! | TGTCAATGTTAAATTTAGGA+AGG | - | chr5_2:57278685-57278704 | None:intergenic | 25.0% |
| ! | CTCATGTCAATGTTAAATTT+AGG | - | chr5_2:57278689-57278708 | None:intergenic | 25.0% |
| ! | AAATTTAACATTGACATGAG+AGG | + | chr5_2:57278689-57278708 | Msa0777850:CDS | 25.0% |
| ! | TTTGAAAGACTTGTAATGTT+GGG | + | chr5_2:57279073-57279092 | Msa0777850:CDS | 25.0% |
| !! | TATAATAAGCTTTTCCTTGA+AGG | + | chr5_2:57279214-57279233 | Msa0777850:CDS | 25.0% |
| ! | AACCATTATGTTGTATTTCA+TGG | + | chr5_2:57279386-57279405 | Msa0777850:intron | 25.0% |
| ! | TTCCATGAAATACAACATAA+TGG | - | chr5_2:57279391-57279410 | None:intergenic | 25.0% |
| ! | TCATAAACTTGAGCATTATA+TGG | - | chr5_2:57279530-57279549 | None:intergenic | 25.0% |
| ! | AAATAGACAAAGAACAAATG+TGG | + | chr5_2:57279703-57279722 | Msa0777850:CDS | 25.0% |
| ! | TAGTTATTGATGCTAAGAAT+AGG | + | chr5_2:57279879-57279898 | Msa0777850:CDS | 25.0% |
| ! | AGTTATTGATGCTAAGAATA+GGG | + | chr5_2:57279880-57279899 | Msa0777850:CDS | 25.0% |
| !! | TTTTGACAAAAACTACACTT+CGG | - | chr5_2:57280148-57280167 | None:intergenic | 25.0% |
| !! | AGTTTTTGTCAAAATTGTGA+TGG | + | chr5_2:57280154-57280173 | Msa0777850:intron | 25.0% |
| ! | TAACGTGTTTATGTTAGAAA+TGG | + | chr5_2:57280179-57280198 | Msa0777850:intron | 25.0% |
| !!! | GTCTTATTTGTTAACTTTTG+TGG | + | chr5_2:57280263-57280282 | Msa0777850:intron | 25.0% |
| !! | ATTTAAAATTGTAGAGTGCT+TGG | - | chr5_2:57280392-57280411 | None:intergenic | 25.0% |
| TTCAAGTCATTTAAGCTTTC+AGG | - | chr5_2:57277364-57277383 | None:intergenic | 30.0% | |
| CTTGATTACCTTCTTAACAT+AGG | - | chr5_2:57277413-57277432 | None:intergenic | 30.0% | |
| CTATGTTAAGAAGGTAATCA+AGG | + | chr5_2:57277411-57277430 | Msa0777850:CDS | 30.0% | |
| AATATCCATCTTCATGCAAT+TGG | - | chr5_2:57277533-57277552 | None:intergenic | 30.0% | |
| TGAATATTGAAGATGACTTG+TGG | + | chr5_2:57277602-57277621 | Msa0777850:CDS | 30.0% | |
| !! | CATTTGTTGTCATGTTCATA+AGG | - | chr5_2:57277660-57277679 | None:intergenic | 30.0% |
| !!! | TGCTTTTTTGTATTTCAGAG+TGG | + | chr5_2:57277882-57277901 | Msa0777850:intron | 30.0% |
| GCTGATATCAAACTTATATG+GGG | + | chr5_2:57278047-57278066 | Msa0777850:CDS | 30.0% | |
| TGCAAAATTGCAGTATTAGT+TGG | - | chr5_2:57278158-57278177 | None:intergenic | 30.0% | |
| ! | AACTAATACTGCAATTTTGC+AGG | + | chr5_2:57278157-57278176 | Msa0777850:CDS | 30.0% |
| TCACTTGATCATGATACATA+TGG | + | chr5_2:57278212-57278231 | Msa0777850:CDS | 30.0% | |
| GATCATGATACATATGGTTT+AGG | + | chr5_2:57278218-57278237 | Msa0777850:CDS | 30.0% | |
| ATTGAATGAGATTCTCTACA+CGG | - | chr5_2:57278322-57278341 | None:intergenic | 30.0% | |
| ATGTCTCATTTCATTGGAAA+TGG | + | chr5_2:57278523-57278542 | Msa0777850:CDS | 30.0% | |
| AAAGTGAACTTAGTATGCTA+AGG | - | chr5_2:57278649-57278668 | None:intergenic | 30.0% | |
| TCGATTACTAAAAATTGCAC+TGG | - | chr5_2:57278821-57278840 | None:intergenic | 30.0% | |
| ! | TTAGTAAAAAGCAAGGTACT+CGG | + | chr5_2:57278941-57278960 | Msa0777850:intron | 30.0% |
| GTTTGAAAGACTTGTAATGT+TGG | + | chr5_2:57279072-57279091 | Msa0777850:CDS | 30.0% | |
| TGCTCAAGTTTATGAAATTC+AGG | + | chr5_2:57279535-57279554 | Msa0777850:CDS | 30.0% | |
| TCAAGTTTATGAAATTCAGG+AGG | + | chr5_2:57279538-57279557 | Msa0777850:CDS | 30.0% | |
| AGATACTGTCTTTGGATATT+AGG | + | chr5_2:57279812-57279831 | Msa0777850:intron | 30.0% | |
| ACATATCAACTACTTTCTCT+AGG | + | chr5_2:57280038-57280057 | Msa0777850:intron | 30.0% | |
| ! | GAGCTTAAACAAAAGTACAT+TGG | - | chr5_2:57280126-57280145 | None:intergenic | 30.0% |
| TGGTTAATCAAGTTTCATGT+AGG | + | chr5_2:57280199-57280218 | Msa0777850:intron | 30.0% | |
| GGTTAATCAAGTTTCATGTA+GGG | + | chr5_2:57280200-57280219 | Msa0777850:intron | 30.0% | |
| TATCAAAACTCATCAGCAAA+AGG | + | chr5_2:57280451-57280470 | Msa0777850:intron | 30.0% | |
| AGTCAAATAAAACAAGTTGC+AGG | - | chr5_2:57280529-57280548 | None:intergenic | 30.0% | |
| ! | CATGATGGAACTGTATGAAT+TGG | - | chr5_2:57277243-57277262 | None:intergenic | 35.0% |
| TACAGTTCCATCATGACATA+TGG | + | chr5_2:57277248-57277267 | Msa0777850:CDS | 35.0% | |
| GGAAATTATAAACCTGTGTC+AGG | + | chr5_2:57277310-57277329 | Msa0777850:CDS | 35.0% | |
| TCATTGCTTTCACACACATT+AGG | + | chr5_2:57277338-57277357 | Msa0777850:CDS | 35.0% | |
| TTAAGAAGGTAATCAAGGCA+AGG | + | chr5_2:57277416-57277435 | Msa0777850:CDS | 35.0% | |
| !! | GACAGTACTGAGATTTTATC+AGG | - | chr5_2:57277451-57277470 | None:intergenic | 35.0% |
| ATCATCCAATTGCATGAAGA+TGG | + | chr5_2:57277525-57277544 | Msa0777850:CDS | 35.0% | |
| AGTATTCTTACAATTGGACG+CGG | - | chr5_2:57277745-57277764 | None:intergenic | 35.0% | |
| ! | TAATACTGCAATTTTGCAGG+TGG | + | chr5_2:57278160-57278179 | Msa0777850:CDS | 35.0% |
| ! | TTAGGTGACATTGTGCTATT+TGG | + | chr5_2:57278236-57278255 | Msa0777850:CDS | 35.0% |
| !! | GACATTGTGCTATTTGGAAA+TGG | + | chr5_2:57278242-57278261 | Msa0777850:CDS | 35.0% |
| ! | TGCTATTTGGAAATGGTAAG+AGG | + | chr5_2:57278249-57278268 | Msa0777850:CDS | 35.0% |
| ATGAAATTAAGTCCTCATCC+AGG | + | chr5_2:57278272-57278291 | Msa0777850:CDS | 35.0% | |
| TATCGAGAAAGACATTGACA+AGG | - | chr5_2:57278298-57278317 | None:intergenic | 35.0% | |
| CAATGCTTTCATCCAAATAC+TGG | + | chr5_2:57278338-57278357 | Msa0777850:CDS | 35.0% | |
| CTTTCATCCAAATACTGGAT+GGG | + | chr5_2:57278343-57278362 | Msa0777850:CDS | 35.0% | |
| TCCAATGAAATGAGACATGT+TGG | - | chr5_2:57278521-57278540 | None:intergenic | 35.0% | |
| !! | TTCAAGCTCTTGATTTGCTA+AGG | + | chr5_2:57278558-57278577 | Msa0777850:CDS | 35.0% |
| GAAACTAATTGATCCAGCAA+AGG | + | chr5_2:57278790-57278809 | Msa0777850:CDS | 35.0% | |
| AACAATTCCATTACAGCTGT+CGG | + | chr5_2:57278871-57278890 | Msa0777850:CDS | 35.0% | |
| TCCTGCATTAGTAAAAAGCA+AGG | + | chr5_2:57278934-57278953 | Msa0777850:CDS | 35.0% | |
| !!! | ACCTTGCTTTTTACTAATGC+AGG | - | chr5_2:57278938-57278957 | None:intergenic | 35.0% |
| ATAGCAGACCAATGTGAATT+TGG | + | chr5_2:57279040-57279059 | Msa0777850:CDS | 35.0% | |
| TACTTCGTCCAAATTCACAT+TGG | - | chr5_2:57279051-57279070 | None:intergenic | 35.0% | |
| TTGTAATGTTGGGATACGAA+AGG | + | chr5_2:57279083-57279102 | Msa0777850:CDS | 35.0% | |
| ! | AAGAGTACATTTCTCCTTCA+AGG | - | chr5_2:57279231-57279250 | None:intergenic | 35.0% |
| ACAAGGAAGAAAGTTAGCAT+AGG | + | chr5_2:57279494-57279513 | Msa0777850:CDS | 35.0% | |
| GTAAATGTTCGTTCTGTTGA+TGG | + | chr5_2:57279602-57279621 | Msa0777850:CDS | 35.0% | |
| ATATCTACCGTGAGATCTAA+TGG | + | chr5_2:57279656-57279675 | Msa0777850:CDS | 35.0% | |
| AACAAATGTGGCTATGACTA+GGG | + | chr5_2:57279715-57279734 | Msa0777850:CDS | 35.0% | |
| ! | TTTTGTGCAGATACTGTCTT+TGG | + | chr5_2:57279804-57279823 | Msa0777850:intron | 35.0% |
| TAATCAACAGTGACTCTGTT+TGG | + | chr5_2:57279849-57279868 | Msa0777850:CDS | 35.0% | |
| TGCTGAAGAGGACAAAAAAT+TGG | + | chr5_2:57279916-57279935 | Msa0777850:CDS | 35.0% | |
| ACAGAACATTCTTAATAGCC+CGG | - | chr5_2:57279943-57279962 | None:intergenic | 35.0% | |
| TTGAGTCACCATTCAAGAAA+CGG | + | chr5_2:57279987-57280006 | Msa0777850:CDS | 35.0% | |
| TAATCAAGTTTCATGTAGGG+TGG | + | chr5_2:57280203-57280222 | Msa0777850:intron | 35.0% | |
| AATCAAGTTTCATGTAGGGT+GGG | + | chr5_2:57280204-57280223 | Msa0777850:intron | 35.0% | |
| !!! | CATCTTGTGAGACTTTTTTG+AGG | + | chr5_2:57280229-57280248 | Msa0777850:intron | 35.0% |
| TTTAGCGCCAATCTTGATAA+TGG | - | chr5_2:57280581-57280600 | None:intergenic | 35.0% | |
| TCTTCAGCCATATGTCATGA+TGG | - | chr5_2:57277258-57277277 | None:intergenic | 40.0% | |
| TTAACATAGGCGATACGGTA+GGG | - | chr5_2:57277400-57277419 | None:intergenic | 40.0% | |
| CCTTCTTAACATAGGCGATA+CGG | - | chr5_2:57277405-57277424 | None:intergenic | 40.0% | |
| AAGGTAATCAAGGCAAGGAA+TGG | + | chr5_2:57277421-57277440 | Msa0777850:CDS | 40.0% | |
| GTCATGCAAATGCATGAAGA+TGG | + | chr5_2:57277468-57277487 | Msa0777850:CDS | 40.0% | |
| ! | AGATGACTTGCAGAACAACA+AGG | + | chr5_2:57277498-57277517 | Msa0777850:CDS | 40.0% |
| ! | CATGTGTGAGGTTGATTTCA+GGG | - | chr5_2:57277698-57277717 | None:intergenic | 40.0% |
| ! | TCATGTGTGAGGTTGATTTC+AGG | - | chr5_2:57277699-57277718 | None:intergenic | 40.0% |
| ATGAAGGTAGATCGACTATC+TGG | - | chr5_2:57277936-57277955 | None:intergenic | 40.0% | |
| GCTTGAAACAGCATCTTCTT+GGG | - | chr5_2:57278000-57278019 | None:intergenic | 40.0% | |
| AGCTTGAAACAGCATCTTCT+TGG | - | chr5_2:57278001-57278020 | None:intergenic | 40.0% | |
| ! | CAATTTTGCAGGTGGCAATT+CGG | + | chr5_2:57278168-57278187 | Msa0777850:CDS | 40.0% |
| ! | TCGGTTGCATAGGTTAGTTA+TGG | + | chr5_2:57278187-57278206 | Msa0777850:CDS | 40.0% |
| GCTTTCATCCAAATACTGGA+TGG | + | chr5_2:57278342-57278361 | Msa0777850:CDS | 40.0% | |
| TTAGTCTCCCATCCAGTATT+TGG | - | chr5_2:57278353-57278372 | None:intergenic | 40.0% | |
| GCCAACATGTCTCATTTCAT+TGG | + | chr5_2:57278517-57278536 | Msa0777850:CDS | 40.0% | |
| !! | CTTGATTTGCTAAGGTCTCT+TGG | + | chr5_2:57278566-57278585 | Msa0777850:CDS | 40.0% |
| AAGGTCTCTTGGAAATTCCT+TGG | + | chr5_2:57278577-57278596 | Msa0777850:CDS | 40.0% | |
| AGGTCTCTTGGAAATTCCTT+GGG | + | chr5_2:57278578-57278597 | Msa0777850:CDS | 40.0% | |
| ACAATTCCATTACAGCTGTC+GGG | + | chr5_2:57278872-57278891 | Msa0777850:CDS | 40.0% | |
| TAGCTTTCTTCCCTGACAAT+GGG | - | chr5_2:57279196-57279215 | None:intergenic | 40.0% | |
| ATAGCTTTCTTCCCTGACAA+TGG | - | chr5_2:57279197-57279216 | None:intergenic | 40.0% | |
| GCTAAGGGTAAAGAGCAATT+TGG | + | chr5_2:57279271-57279290 | Msa0777850:CDS | 40.0% | |
| GGTAAAGAGCAATTTGGTCA+TGG | + | chr5_2:57279277-57279296 | Msa0777850:CDS | 40.0% | |
| TGGACAAAGTCTGAAGAACA+TGG | + | chr5_2:57279297-57279316 | Msa0777850:CDS | 40.0% | |
| AAGTCTGAAGAACATGGTTC+AGG | + | chr5_2:57279303-57279322 | Msa0777850:CDS | 40.0% | |
| ATACGAACGCTGAAGATTTC+TGG | - | chr5_2:57279414-57279433 | None:intergenic | 40.0% | |
| TTCCTTGTCTTCATGAACAC+TGG | - | chr5_2:57279482-57279501 | None:intergenic | 40.0% | |
| AGGAAATTGAGCAGTACACT+CGG | + | chr5_2:57279558-57279577 | Msa0777850:CDS | 40.0% | |
| !!! | CGTTCTGTTGATGGTTTTCA+AGG | + | chr5_2:57279611-57279630 | Msa0777850:CDS | 40.0% |
| !!! | TCTGTTGATGGTTTTCAAGG+TGG | + | chr5_2:57279614-57279633 | Msa0777850:CDS | 40.0% |
| ACCAGTACCATTAGATCTCA+CGG | - | chr5_2:57279666-57279685 | None:intergenic | 40.0% | |
| !! | TCTAATGGTACTGGTGATGT+TGG | + | chr5_2:57279671-57279690 | Msa0777850:CDS | 40.0% |
| GAACAAATGTGGCTATGACT+AGG | + | chr5_2:57279714-57279733 | Msa0777850:CDS | 40.0% | |
| TTGTTTCCACAATGCTGAAG+AGG | + | chr5_2:57279904-57279923 | Msa0777850:CDS | 40.0% | |
| ! | TTTTGTCCTCTTCAGCATTG+TGG | - | chr5_2:57279913-57279932 | None:intergenic | 40.0% |
| AAGAGGACAAAAAATTGGCC+CGG | + | chr5_2:57279921-57279940 | Msa0777850:CDS | 40.0% | |
| CAGAACATTCTTAATAGCCC+GGG | - | chr5_2:57279942-57279961 | None:intergenic | 40.0% | |
| ATTCTTCCAGTCGTTGAATC+TGG | - | chr5_2:57279967-57279986 | None:intergenic | 40.0% | |
| TTGAATGTTTGGATGAGCGA+TGG | + | chr5_2:57280084-57280103 | Msa0777850:intron | 40.0% | |
| TGAATGTTTGGATGAGCGAT+GGG | + | chr5_2:57280085-57280104 | Msa0777850:intron | 40.0% | |
| ATCAAGTTTCATGTAGGGTG+GGG | + | chr5_2:57280205-57280224 | Msa0777850:intron | 40.0% | |
| !! | TTGATAATGGCGGCGTAATA+AGG | - | chr5_2:57280568-57280587 | None:intergenic | 40.0% |
| TAACATAGGCGATACGGTAG+GGG | - | chr5_2:57277399-57277418 | None:intergenic | 45.0% | |
| CTTAACATAGGCGATACGGT+AGG | - | chr5_2:57277401-57277420 | None:intergenic | 45.0% | |
| CCGTATCGCCTATGTTAAGA+AGG | + | chr5_2:57277402-57277421 | Msa0777850:CDS | 45.0% | |
| ! | ATCGACTATCTGGTTCAGAC+AGG | - | chr5_2:57277926-57277945 | None:intergenic | 45.0% |
| AAACTTATATGGGGACCACC+AGG | + | chr5_2:57278056-57278075 | Msa0777850:CDS | 45.0% | |
| AACTTATATGGGGACCACCA+GGG | + | chr5_2:57278057-57278076 | Msa0777850:CDS | 45.0% | |
| CTCTACTCGAGCTAAAAACC+AGG | + | chr5_2:57278117-57278136 | Msa0777850:CDS | 45.0% | |
| AGAAAGACATTGACAAGGCC+TGG | - | chr5_2:57278293-57278312 | None:intergenic | 45.0% | |
| GGAGTTCAGCAACTCTATCA+TGG | - | chr5_2:57278384-57278403 | None:intergenic | 45.0% | |
| TGTTGGCATGTGTGTGTGTA+AGG | - | chr5_2:57278504-57278523 | None:intergenic | 45.0% | |
| GGTCTCTTGGAAATTCCTTG+GGG | + | chr5_2:57278579-57278598 | Msa0777850:CDS | 45.0% | |
| CATCTCCGATTAGGATGCAA+CGG | - | chr5_2:57278904-57278923 | None:intergenic | 45.0% | |
| GTTGTCTCTCATCTCCGATT+AGG | - | chr5_2:57278913-57278932 | None:intergenic | 45.0% | |
| CACGGGAATAAGCTAATGGA+AGG | - | chr5_2:57279139-57279158 | None:intergenic | 45.0% | |
| TTCGCACGGGAATAAGCTAA+TGG | - | chr5_2:57279143-57279162 | None:intergenic | 45.0% | |
| CATCATAGAACTCTTCGCAC+GGG | - | chr5_2:57279156-57279175 | None:intergenic | 45.0% | |
| CCATCATAGAACTCTTCGCA+CGG | - | chr5_2:57279157-57279176 | None:intergenic | 45.0% | |
| TATCTGATGCTCCCATTGTC+AGG | + | chr5_2:57279182-57279201 | Msa0777850:CDS | 45.0% | |
| ATCTGATGCTCCCATTGTCA+GGG | + | chr5_2:57279183-57279202 | Msa0777850:CDS | 45.0% | |
| TGCCAGTGTTCATGAAGACA+AGG | + | chr5_2:57279477-57279496 | Msa0777850:intron | 45.0% | |
| GGAAATTGAGCAGTACACTC+GGG | + | chr5_2:57279559-57279578 | Msa0777850:CDS | 45.0% | |
| !! | TGATGGTTTTCAAGGTGGTG+AGG | + | chr5_2:57279619-57279638 | Msa0777850:CDS | 45.0% |
| ACCGTGAGATCTAATGGTAC+TGG | + | chr5_2:57279662-57279681 | Msa0777850:CDS | 45.0% | |
| AGAGGACAAAAAATTGGCCC+GGG | + | chr5_2:57279922-57279941 | Msa0777850:CDS | 45.0% | |
| TCTGTTCCAGATTCAACGAC+TGG | + | chr5_2:57279958-57279977 | Msa0777850:CDS | 45.0% | |
| CCTAAACGCCGTTTCTTGAA+TGG | - | chr5_2:57279998-57280017 | None:intergenic | 45.0% | |
| CCATTCAAGAAACGGCGTTT+AGG | + | chr5_2:57279995-57280014 | Msa0777850:intron | 45.0% | |
| TTCAAGAAACGGCGTTTAGG+AGG | + | chr5_2:57279998-57280017 | Msa0777850:intron | 45.0% | |
| TCAAGAAACGGCGTTTAGGA+GGG | + | chr5_2:57279999-57280018 | Msa0777850:intron | 45.0% | |
| AACTACTTTCTCTAGGCGAG+TGG | + | chr5_2:57280045-57280064 | Msa0777850:intron | 45.0% | |
| ! | GAGCGATGGGTTTCTCTAAA+TGG | + | chr5_2:57280098-57280117 | Msa0777850:intron | 45.0% |
| AATAAGGAACTGCGTCAGCA+AGG | - | chr5_2:57280552-57280571 | None:intergenic | 45.0% | |
| TACGCCGCCATTATCAAGAT+TGG | + | chr5_2:57280571-57280590 | Msa0777850:CDS | 45.0% | |
| !! | AGCGCCAATCTTGATAATGG+CGG | - | chr5_2:57280578-57280597 | None:intergenic | 45.0% |
| ATCAAGATTGGCGCTAAAGC+TGG | + | chr5_2:57280583-57280602 | Msa0777850:CDS | 45.0% | |
| TCAAGATTGGCGCTAAAGCT+GGG | + | chr5_2:57280584-57280603 | Msa0777850:CDS | 45.0% | |
| ! | GAACTCACTCTTTGGTTCCT+TGG | + | chr5_2:57280608-57280627 | Msa0777850:CDS | 45.0% |
| GCAATGAGATCTCCTGACAC+AGG | - | chr5_2:57277325-57277344 | None:intergenic | 50.0% | |
| !! | TTTGTTTTCCCTGTCCCTGG+TGG | - | chr5_2:57278074-57278093 | None:intergenic | 50.0% |
| !!! | GTCTTTGTTTTCCCTGTCCC+TGG | - | chr5_2:57278077-57278096 | None:intergenic | 50.0% |
| TGGAGCACATGTCAATGTCC+TGG | - | chr5_2:57278138-57278157 | None:intergenic | 50.0% | |
| AGGTGGCAATTCGGTTGCAT+AGG | + | chr5_2:57278177-57278196 | Msa0777850:CDS | 50.0% | |
| ACATTGACAAGGCCTGGATG+AGG | - | chr5_2:57278287-57278306 | None:intergenic | 50.0% | |
| !! | CTTGAATTTGGCTTGCCCCA+AGG | - | chr5_2:57278597-57278616 | None:intergenic | 50.0% |
| CTCCACCGTTGCATCCTAAT+CGG | + | chr5_2:57278896-57278915 | Msa0777850:CDS | 50.0% | |
| CCGTGCGAAGAGTTCTATGA+TGG | + | chr5_2:57279154-57279173 | Msa0777850:CDS | 50.0% | |
| ATGTGGCTATGACTAGGGCT+AGG | + | chr5_2:57279720-57279739 | Msa0777850:CDS | 50.0% | |
| ACGGCGTTTAGGAGGGAAAA+TGG | + | chr5_2:57280006-57280025 | Msa0777850:intron | 50.0% | |
| CGGCGTTTAGGAGGGAAAAT+GGG | + | chr5_2:57280007-57280026 | Msa0777850:intron | 50.0% | |
| AGCTGGGAGAACTCACTCTT+TGG | + | chr5_2:57280600-57280619 | Msa0777850:CDS | 50.0% | |
| ! | AGGCGATACGGTAGGGGTTT+TGG | - | chr5_2:57277393-57277412 | None:intergenic | 55.0% |
| !! | TGCACTGGCTTCACCTTTGC+TGG | - | chr5_2:57278806-57278825 | None:intergenic | 55.0% |
| TGGAGACCCGACAGCTGTAA+TGG | - | chr5_2:57278881-57278900 | None:intergenic | 55.0% | |
| CTCCGATTAGGATGCAACGG+TGG | - | chr5_2:57278901-57278920 | None:intergenic | 55.0% | |
| ATATGGGGACCACCAGGGAC+AGG | + | chr5_2:57278062-57278081 | Msa0777850:CDS | 60.0% | |
| TATGGGGACCACCAGGGACA+GGG | + | chr5_2:57278063-57278082 | Msa0777850:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_2 | gene | 57277154 | 57280636 | 57277154 | ID=Msa0777850;Name=Msa0777850 |
| chr5_2 | mRNA | 57277154 | 57280636 | 57277154 | ID=Msa0777850-mRNA-1;Parent=Msa0777850;Name=Msa0777850-mRNA-1;_AED=0.30;_eAED=0.32;_QI=0|0.6|0.33|0.83|1|1|6|0|836 |
| chr5_2 | exon | 57277154 | 57277753 | 57277154 | ID=Msa0777850-mRNA-1:exon:16934;Parent=Msa0777850-mRNA-1 |
| chr5_2 | exon | 57277900 | 57278955 | 57277900 | ID=Msa0777850-mRNA-1:exon:16935;Parent=Msa0777850-mRNA-1 |
| chr5_2 | exon | 57279040 | 57279364 | 57279040 | ID=Msa0777850-mRNA-1:exon:16936;Parent=Msa0777850-mRNA-1 |
| chr5_2 | exon | 57279483 | 57279741 | 57279483 | ID=Msa0777850-mRNA-1:exon:16937;Parent=Msa0777850-mRNA-1 |
| chr5_2 | exon | 57279814 | 57280010 | 57279814 | ID=Msa0777850-mRNA-1:exon:16938;Parent=Msa0777850-mRNA-1 |
| chr5_2 | exon | 57280563 | 57280636 | 57280563 | ID=Msa0777850-mRNA-1:exon:16939;Parent=Msa0777850-mRNA-1 |
| chr5_2 | CDS | 57277154 | 57277753 | 57277154 | ID=Msa0777850-mRNA-1:cds;Parent=Msa0777850-mRNA-1 |
| chr5_2 | CDS | 57277900 | 57278955 | 57277900 | ID=Msa0777850-mRNA-1:cds;Parent=Msa0777850-mRNA-1 |
| chr5_2 | CDS | 57279040 | 57279364 | 57279040 | ID=Msa0777850-mRNA-1:cds;Parent=Msa0777850-mRNA-1 |
| chr5_2 | CDS | 57279483 | 57279741 | 57279483 | ID=Msa0777850-mRNA-1:cds;Parent=Msa0777850-mRNA-1 |
| chr5_2 | CDS | 57279814 | 57280010 | 57279814 | ID=Msa0777850-mRNA-1:cds;Parent=Msa0777850-mRNA-1 |
| chr5_2 | CDS | 57280563 | 57280636 | 57280563 | ID=Msa0777850-mRNA-1:cds;Parent=Msa0777850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
