AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0223090

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223090 MtrunA17_Chr2g0328601 93.333 795 38 4 1 794 11 791 0.0 1466
Msa0223090 MtrunA17_Chr4g0031981 78.726 691 147 0 104 794 114 804 0.0 1179
Msa0223090 MtrunA17_Chr5g0400161 88.889 72 8 0 658 729 1 72 4.93e-39 139
Msa0223090 MtrunA17_Chr2g0328911 24.597 496 315 19 294 778 286 733 1.10e-23 107
Msa0223090 MtrunA17_Chr1g0184291 31.156 199 110 7 589 778 165 345 2.81e-13 72.4
Msa0223090 MtrunA17_Chr2g0322151 30.968 155 92 3 629 778 200 344 1.48e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0223090 AT3G46740.1 76.377 690 163 0 105 794 129 818 0.0 1151
Msa0223090 AT4G09080.1 62.169 415 136 7 382 794 1 396 3.58e-171 499
Msa0223090 AT4G09080.2 62.169 415 136 7 382 794 12 407 6.57e-171 499
Msa0223090 AT4G09080.3 70.462 325 93 3 472 794 2 325 3.75e-160 468
Msa0223090 AT1G35860.1 49.419 516 138 8 258 769 3 399 2.66e-155 458
Msa0223090 AT5G19620.1 24.597 496 325 15 294 782 269 722 2.59e-25 112
Msa0223090 AT3G44160.1 28.194 227 131 8 540 750 102 312 2.78e-13 72.8

Find 267 sgRNAs with CRISPR-Local

Find 409 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2_1:+72588368 Msa0223090:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2_1:-72588961 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2_1:-72591632 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2_1:-72588640 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2_1:+72588483 Msa0223090:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2_1:-72591589 None:intergenic
AGGCATAATTGTTGAAATTA+AGG 0.242334 2_1:+72589064 Msa0223090:CDS
GGTGGTGGAGGTTGGTGGTT+TGG 0.263241 2_1:+72587790 Msa0223090:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2_1:+72588035 Msa0223090:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2_1:+72591948 Msa0223090:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2_1:+72588421 Msa0223090:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2_1:-72588639 None:intergenic
CTGATTGTCTTGATATTTGA+TGG 0.314401 2_1:+72592132 Msa0223090:three_prime_UTR
GGAGTATGCACATCCATATT+TGG 0.314750 2_1:+72589507 Msa0223090:CDS
TGGATGAAGTGCCACCAATA+TGG 0.315749 2_1:+72589620 Msa0223090:CDS
GGTGGACATGGTGGTGGTGG+TGG 0.322426 2_1:+72587751 Msa0223090:CDS
TTCTTTAGTACTTGGAGAAT+TGG 0.326717 2_1:+72592080 Msa0223090:three_prime_UTR
TTATCTACACCATCCAAATA+TGG 0.337762 2_1:-72589520 None:intergenic
GTGGCAGTGGTGGTGGAGGT+TGG 0.339631 2_1:+72587782 Msa0223090:CDS
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2_1:+72591581 Msa0223090:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2_1:-72588363 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.346483 2_1:-72589346 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2_1:+72588369 Msa0223090:CDS
GGTGGAGGTTGGTGGTTTGG+AGG 0.353180 2_1:+72587793 Msa0223090:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2_1:+72589780 Msa0223090:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2_1:+72588359 Msa0223090:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.368723 2_1:+72587775 Msa0223090:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2_1:+72591753 Msa0223090:CDS
AACCTCACAAACAACCTCTT+TGG 0.380682 2_1:-72588517 None:intergenic
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2_1:+72591864 Msa0223090:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2_1:+72587814 Msa0223090:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2_1:+72591795 Msa0223090:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2_1:+72587811 Msa0223090:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2_1:+72588428 Msa0223090:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2_1:+72589837 Msa0223090:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2_1:+72588310 Msa0223090:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2_1:+72588120 Msa0223090:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2_1:+72588178 Msa0223090:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2_1:+72588403 Msa0223090:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2_1:-72591765 None:intergenic
GCAGTGGTGGTGGAGGTTGG+TGG 0.409155 2_1:+72587785 Msa0223090:CDS
ATTCACTTATGGACTTGTAA+TGG 0.409835 2_1:+72589791 Msa0223090:CDS
CCACCGCGATCAACCCATAT+TGG 0.412791 2_1:-72589634 None:intergenic
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2_1:+72587802 Msa0223090:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2_1:+72588036 Msa0223090:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2_1:-72591427 None:intergenic
GGTGGTGGACATGGTGGTGG+TGG 0.421380 2_1:+72587748 Msa0223090:CDS
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2_1:-72589038 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2_1:-72591420 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2_1:+72588957 Msa0223090:CDS
TGAATACTGGACTCAGCTTT+CGG 0.430080 2_1:-72589582 None:intergenic
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2_1:+72587745 Msa0223090:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2_1:-72591468 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2_1:-72587686 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2_1:+72587772 Msa0223090:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2_1:+72591582 Msa0223090:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2_1:+72591739 Msa0223090:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2_1:+72588074 Msa0223090:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2_1:-72587680 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2_1:+72588932 Msa0223090:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2_1:+72589903 Msa0223090:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2_1:-72587916 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2_1:+72591870 Msa0223090:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2_1:-72589044 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2_1:-72587662 None:intergenic
GGAGGTTGGTGGTTTGGAGG+AGG 0.457441 2_1:+72587796 Msa0223090:CDS
GGTGGTGGTGGTGGAAGTAA+TGG 0.462440 2_1:+72587760 Msa0223090:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2_1:-72591426 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2_1:+72591887 Msa0223090:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2_1:-72591895 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2_1:+72588567 Msa0223090:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2_1:+72591517 Msa0223090:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2_1:-72589355 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2_1:+72587808 Msa0223090:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2_1:-72587721 None:intergenic
TGGTGGCACTTCATCCAGCC+CGG 0.473493 2_1:-72589614 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2_1:-72587638 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2_1:+72589486 Msa0223090:intron
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2_1:-72591511 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2_1:+72588453 Msa0223090:CDS
TTTGCGACGGCCGGACAAGA+TGG 0.480747 2_1:-72587566 None:intergenic
GTTGATCATAACTCAGGAAC+TGG 0.481477 2_1:+72591927 Msa0223090:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2_1:+72591882 Msa0223090:CDS
GGTTACAACATGGGTGAACT+TGG 0.484076 2_1:+72591604 Msa0223090:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2_1:-72587668 None:intergenic
AAGCTGAGTCCAGTATTCAC+TGG 0.485593 2_1:+72589586 Msa0223090:CDS
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2_1:+72588422 Msa0223090:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2_1:-72589544 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2_1:+72589076 Msa0223090:CDS
GGAAGCTCTCTATGTATCAC+AGG 0.487037 2_1:-72588618 None:intergenic
CACAACCACCATAGCGGCCA+TGG 0.488369 2_1:-72591525 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2_1:+72587769 Msa0223090:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2_1:+72589264 Msa0223090:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2_1:-72587722 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2_1:+72588293 Msa0223090:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2_1:+72587889 Msa0223090:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2_1:-72587661 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2_1:+72588093 Msa0223090:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2_1:-72589140 None:intergenic
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2_1:-72587639 None:intergenic
TGGATTCTGCAATGATCCCT+TGG 0.494510 2_1:-72592169 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2_1:+72589978 Msa0223090:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2_1:-72591843 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2_1:+72591508 Msa0223090:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2_1:+72587733 Msa0223090:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2_1:-72587609 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2_1:+72588317 Msa0223090:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2_1:+72591838 Msa0223090:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2_1:+72587727 Msa0223090:CDS
AGCTGAGTCCAGTATTCACT+GGG 0.498536 2_1:+72589587 Msa0223090:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2_1:+72591594 Msa0223090:CDS
GGTGGCACTTCATCCAGCCC+GGG 0.498938 2_1:-72589613 None:intergenic
AACAGCTTACATGAAGAGTT+CGG 0.499486 2_1:-72589552 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2_1:-72587610 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2_1:+72591768 Msa0223090:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2_1:-72591588 None:intergenic
TTCGGCGGCACCATCTTGTC+CGG 0.504504 2_1:+72587556 Msa0223090:CDS
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2_1:+72588213 Msa0223090:CDS
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2_1:+72588388 Msa0223090:CDS
GGATGAAGTGCCACCAATAT+GGG 0.507612 2_1:+72589621 Msa0223090:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2_1:-72588255 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2_1:+72588155 Msa0223090:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.515685 2_1:-72587548 None:intergenic
AACACCACTGGTGGTGGACA+TGG 0.516543 2_1:+72587739 Msa0223090:CDS
AATGGTGGCAGTGGTGGTGG+AGG 0.516851 2_1:+72587778 Msa0223090:CDS
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2_1:+72588121 Msa0223090:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2_1:+72589998 Msa0223090:CDS
CAGAAGTACAATACCAGAGT+TGG 0.521701 2_1:-72589158 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2_1:+72591382 Msa0223090:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2_1:+72588147 Msa0223090:CDS
GGTGGTGGTGGAAGTAATGG+TGG 0.524691 2_1:+72587763 Msa0223090:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2_1:+72591846 Msa0223090:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2_1:+72589108 Msa0223090:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2_1:-72587648 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2_1:-72587704 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2_1:+72591394 Msa0223090:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2_1:+72591583 Msa0223090:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.535781 2_1:+72588525 Msa0223090:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2_1:+72587538 Msa0223090:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2_1:-72589907 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2_1:+72591816 Msa0223090:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2_1:-72587692 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2_1:+72591852 Msa0223090:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2_1:+72588323 Msa0223090:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2_1:-72591559 None:intergenic
GCAGACAAAGCCGATTGAGT+TGG 0.539592 2_1:+72588245 Msa0223090:CDS
TACCAAAGAGGTTGTTTGTG+AGG 0.542702 2_1:+72588515 Msa0223090:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2_1:-72587729 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2_1:+72588933 Msa0223090:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2_1:+72588473 Msa0223090:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2_1:-72587708 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2_1:+72591624 Msa0223090:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2_1:+72591845 Msa0223090:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2_1:-72589903 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2_1:+72588271 Msa0223090:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2_1:+72588107 Msa0223090:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2_1:+72591520 Msa0223090:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2_1:+72588328 Msa0223090:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2_1:-72587671 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2_1:+72591817 Msa0223090:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2_1:+72589894 Msa0223090:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2_1:+72591388 Msa0223090:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2_1:+72589145 Msa0223090:CDS
TGGAAATCTTAATACCAAAG+AGG 0.562046 2_1:+72588503 Msa0223090:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2_1:-72587698 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2_1:-72587602 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2_1:-72587601 None:intergenic
CCGCGATCAACCCATATTGG+TGG 0.564600 2_1:-72589631 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2_1:-72588054 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2_1:+72588582 Msa0223090:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2_1:-72591405 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2_1:-72591507 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2_1:+72591462 Msa0223090:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2_1:+72588068 Msa0223090:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2_1:-72587859 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2_1:+72588052 Msa0223090:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2_1:-72587634 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.577947 2_1:+72589321 Msa0223090:CDS
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2_1:-72587674 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2_1:+72589356 Msa0223090:CDS
GGATGGAACGAGAGAAGACA+TGG 0.579164 2_1:-72587527 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2_1:+72588313 Msa0223090:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2_1:+72589300 Msa0223090:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2_1:-72588351 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2_1:-72588154 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2_1:+72588298 Msa0223090:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2_1:+72589021 Msa0223090:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2_1:-72589139 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2_1:+72589122 Msa0223090:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2_1:+72591469 Msa0223090:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2_1:+72588626 Msa0223090:CDS
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2_1:+72587805 Msa0223090:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2_1:+72587730 Msa0223090:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2_1:+72591475 Msa0223090:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2_1:-72587663 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2_1:+72588179 Msa0223090:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2_1:+72589128 Msa0223090:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2_1:-72588370 None:intergenic
GGGATCATTGCAGAATCCAC+AGG 0.594493 2_1:+72592173 Msa0223090:three_prime_UTR
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2_1:-72587689 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2_1:+72588266 Msa0223090:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2_1:-72591419 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2_1:+72591529 Msa0223090:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2_1:+72591595 Msa0223090:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2_1:-72591505 None:intergenic
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2_1:-72591441 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2_1:+72589876 Msa0223090:CDS
TATGGTGTCAGTTGTTCCTG+TGG 0.600323 2_1:-72592189 None:intergenic
TGGTACTGGCATTGATCACA+TGG 0.604743 2_1:+72589917 Msa0223090:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2_1:+72589511 Msa0223090:CDS
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2_1:+72588299 Msa0223090:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2_1:+72589861 Msa0223090:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2_1:-72587544 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2_1:-72591444 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2_1:-72591842 None:intergenic
AACTCAATCGGCTTTGTCTG+CGG 0.610651 2_1:-72588243 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2_1:-72589900 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2_1:+72588379 Msa0223090:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2_1:-72591506 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2_1:+72589132 Msa0223090:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2_1:-72587743 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2_1:+72587742 Msa0223090:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2_1:+72589088 Msa0223090:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2_1:+72589131 Msa0223090:CDS
GTGGCACTTCATCCAGCCCG+GGG 0.624430 2_1:-72589612 None:intergenic
CCATGGAGGACAAGAACTGG+CGG 0.627462 2_1:-72591508 None:intergenic
CTACTAGTCTAGTATTAGCA+CGG 0.628634 2_1:-72592050 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2_1:+72591806 Msa0223090:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2_1:+72588454 Msa0223090:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2_1:+72591465 Msa0223090:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2_1:+72589041 Msa0223090:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2_1:+72588138 Msa0223090:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2_1:+72591921 Msa0223090:CDS
GAAGCTCTCTATGTATCACA+GGG 0.631275 2_1:-72588617 None:intergenic
TGATATGACTGAGAAGGAGA+GGG 0.631555 2_1:+72588272 Msa0223090:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2_1:+72588439 Msa0223090:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2_1:+72589816 Msa0223090:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2_1:+72589267 Msa0223090:intron
TCAATATTAAAGGTGTTACC+CGG 0.639699 2_1:-72588951 None:intergenic
ACACCTTTAATATTGAAGCA+GGG 0.649166 2_1:+72588958 Msa0223090:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2_1:+72588182 Msa0223090:CDS
CCAATATGGGTTGATCGCGG+TGG 0.652292 2_1:+72589634 Msa0223090:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2_1:-72591925 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2_1:-72589282 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2_1:+72589040 Msa0223090:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2_1:+72589044 Msa0223090:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2_1:+72587931 Msa0223090:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2_1:+72587541 Msa0223090:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2_1:-72589271 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2_1:+72591440 Msa0223090:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2_1:+72589855 Msa0223090:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2_1:+72588053 Msa0223090:CDS
CCACCAATATGGGTTGATCG+CGG 0.691172 2_1:+72589631 Msa0223090:CDS
TGTCAAAGCTAATATTACAG+AGG 0.693959 2_1:+72589657 Msa0223090:CDS
CTGAGTCCAGTATTCACTGG+GGG 0.694649 2_1:+72589589 Msa0223090:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2_1:-72591531 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2_1:-72591522 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2_1:-72589873 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2_1:+72589897 Msa0223090:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2_1:+72588039 Msa0223090:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2_1:-72589780 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2_1:+72589858 Msa0223090:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2_1:+72591627 Msa0223090:CDS
GATCAATGCCAGTACCACCG+AGG 0.774073 2_1:-72589911 None:intergenic
GCTGAGTCCAGTATTCACTG+GGG 0.777122 2_1:+72589588 Msa0223090:CDS
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2_1:-72587645 None:intergenic
AAGCTCTCTATGTATCACAG+GGG 0.819683 2_1:-72588616 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG + chr2_1:72591234-72591253 Msa0223090:intron 0.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr2_1:72591207-72591226 None:intergenic 10.0%
!!! GTTTTTAAATTACATTTTTT+TGG + chr2_1:72592015-72592034 Msa0223090:three_prime_UTR 10.0%
!! ATATTATATTATACCTCTTT+GGG - chr2_1:72588642-72588661 None:intergenic 15.0%
!! AATATTATATTATACCTCTT+TGG - chr2_1:72588643-72588662 None:intergenic 15.0%
!! TTGTTATCTGTTATATATAT+GGG + chr2_1:72588693-72588712 Msa0223090:intron 15.0%
!!! AATAATTGATATTTCTAGTA+TGG + chr2_1:72588776-72588795 Msa0223090:intron 15.0%
!!! TATTTTTACATGAACTATTT+AGG + chr2_1:72589699-72589718 Msa0223090:intron 15.0%
!! TTGAAATGAAAAAACATTTA+GGG - chr2_1:72590339-72590358 None:intergenic 15.0%
!! ATTGAAATGAAAAAACATTT+AGG - chr2_1:72590340-72590359 None:intergenic 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG - chr2_1:72590834-72590853 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr2_1:72591083-72591102 None:intergenic 15.0%
!! AACATAATTGATTACTAAAA+AGG + chr2_1:72591143-72591162 Msa0223090:intron 15.0%
!!! CTAAAACAAAATTTTTAATG+TGG - chr2_1:72591260-72591279 None:intergenic 15.0%
!!! CACATTAAAAATTTTGTTTT+AGG + chr2_1:72591258-72591277 Msa0223090:intron 15.0%
!! AATTGAATAGTTATATTGAC+AGG - chr2_1:72587919-72587938 None:intergenic 20.0%
!! GTTGTTATCTGTTATATATA+TGG + chr2_1:72588692-72588711 Msa0223090:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG + chr2_1:72589432-72589451 Msa0223090:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG - chr2_1:72590080-72590099 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG + chr2_1:72590078-72590097 Msa0223090:intron 20.0%
!! AAGGCTTAAAGATAATAAAA+AGG - chr2_1:72590114-72590133 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG - chr2_1:72590133-72590152 None:intergenic 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG + chr2_1:72590133-72590152 Msa0223090:intron 20.0%
!! TTTACCAATACAATTATAAG+AGG - chr2_1:72590140-72590159 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG - chr2_1:72590266-72590285 None:intergenic 20.0%
!!! TTTTTTCACACATAATTTTG+AGG - chr2_1:72591057-72591076 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG + chr2_1:72591057-72591076 Msa0223090:intron 20.0%
!!! TTACATTTTTTTGGTTTAAG+TGG + chr2_1:72592024-72592043 Msa0223090:three_prime_UTR 20.0%
!!! TACATTTTTTTGGTTTAAGT+GGG + chr2_1:72592025-72592044 Msa0223090:three_prime_UTR 20.0%
! TGAAATGATTTCTATTGTTC+CGG + chr2_1:72588035-72588054 Msa0223090:CDS 25.0%
! AAGTTTCGTTGTATTAATGT+TGG + chr2_1:72588213-72588232 Msa0223090:CDS 25.0%
! TTATCTGTTATATATATGGG+AGG + chr2_1:72588696-72588715 Msa0223090:intron 25.0%
! TCTTATTGTTGTCAATTTAG+AGG + chr2_1:72588729-72588748 Msa0223090:intron 25.0%
! CTTATTGTTGTCAATTTAGA+GGG + chr2_1:72588730-72588749 Msa0223090:intron 25.0%
! AGGCAAATAATCATTGAAAT+TGG - chr2_1:72588812-72588831 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG + chr2_1:72589010-72589029 Msa0223090:CDS 25.0%
! AGGCATAATTGTTGAAATTA+AGG + chr2_1:72589064-72589083 Msa0223090:CDS 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG + chr2_1:72589076-72589095 Msa0223090:CDS 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG + chr2_1:72589248-72589267 Msa0223090:intron 25.0%
! GGATATATAAGACTGAATAT+TGG - chr2_1:72590245-72590264 None:intergenic 25.0%
! AGAAAAAAATAGTCCATCAA+CGG - chr2_1:72590397-72590416 None:intergenic 25.0%
!! CAACTTTTATATTGATCCAA+AGG - chr2_1:72590509-72590528 None:intergenic 25.0%
! CTTTGGATCAATATAAAAGT+TGG + chr2_1:72590507-72590526 Msa0223090:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG - chr2_1:72590658-72590677 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr2_1:72591077-72591096 Msa0223090:intron 25.0%
! GTCTTAAATAGAAAACATCA+GGG - chr2_1:72591305-72591324 None:intergenic 25.0%
! AGTCTTAAATAGAAAACATC+AGG - chr2_1:72591306-72591325 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG + chr2_1:72591372-72591391 Msa0223090:intron 25.0%
! TGATAAAGAATCATAAAACG+AGG - chr2_1:72591666-72591685 None:intergenic 25.0%
TCTGAAGAATTTGATTCTCA+TGG + chr2_1:72587889-72587908 Msa0223090:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG + chr2_1:72587931-72587950 Msa0223090:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG + chr2_1:72587994-72588013 Msa0223090:CDS 30.0%
GAAATGATTTCTATTGTTCC+GGG + chr2_1:72588036-72588055 Msa0223090:CDS 30.0%
ATCTAGTGGAATGTTTGAAA+AGG + chr2_1:72588107-72588126 Msa0223090:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG + chr2_1:72588120-72588139 Msa0223090:CDS 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG + chr2_1:72588121-72588140 Msa0223090:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG + chr2_1:72588178-72588197 Msa0223090:CDS 30.0%
!! TTCATATAGTGAGAGTACTT+GGG + chr2_1:72588179-72588198 Msa0223090:CDS 30.0%
ATATCAGAATCCAACTCAAT+CGG - chr2_1:72588258-72588277 None:intergenic 30.0%
TGGAAATCTTAATACCAAAG+AGG + chr2_1:72588503-72588522 Msa0223090:CDS 30.0%
TATATATATGGGAGGTTCAT+AGG + chr2_1:72588704-72588723 Msa0223090:intron 30.0%
CAATGATTATTTGCCTGTTT+AGG + chr2_1:72588816-72588835 Msa0223090:intron 30.0%
! TATTTGCCTGTTTAGGATAT+CGG + chr2_1:72588823-72588842 Msa0223090:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG + chr2_1:72588880-72588899 Msa0223090:intron 30.0%
! TAAAACCAATGAGCAGTTTT+AGG - chr2_1:72588888-72588907 None:intergenic 30.0%
!! TCAATATTAAAGGTGTTACC+CGG - chr2_1:72588954-72588973 None:intergenic 30.0%
AACACCTTTAATATTGAAGC+AGG + chr2_1:72588957-72588976 Msa0223090:CDS 30.0%
ACACCTTTAATATTGAAGCA+GGG + chr2_1:72588958-72588977 Msa0223090:CDS 30.0%
AGAAAAAAAAAATCCCTTGG+TGG - chr2_1:72589210-72589229 None:intergenic 30.0%
AGCAGAAAAAAAAAATCCCT+TGG - chr2_1:72589213-72589232 None:intergenic 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG + chr2_1:72589289-72589308 Msa0223090:CDS 30.0%
TTATCTACACCATCCAAATA+TGG - chr2_1:72589523-72589542 None:intergenic 30.0%
TGTCAAAGCTAATATTACAG+AGG + chr2_1:72589657-72589676 Msa0223090:CDS 30.0%
ACATGAACTATTTAGGCTAA+TGG + chr2_1:72589706-72589725 Msa0223090:intron 30.0%
ATTCACTTATGGACTTGTAA+TGG + chr2_1:72589791-72589810 Msa0223090:CDS 30.0%
GGTAATCAAATTTGTGCAAA+TGG + chr2_1:72589837-72589856 Msa0223090:CDS 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG - chr2_1:72590036-72590055 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG + chr2_1:72590044-72590063 Msa0223090:intron 30.0%
GTAGTCACATAAAACAAGAT+AGG - chr2_1:72590163-72590182 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG - chr2_1:72590300-72590319 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG + chr2_1:72590358-72590377 Msa0223090:intron 30.0%
GTTAACCATAGGATCTAAAT+AGG - chr2_1:72590366-72590385 None:intergenic 30.0%
GTAAACCTATCTACAAAGAT+AGG + chr2_1:72590533-72590552 Msa0223090:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG + chr2_1:72590879-72590898 Msa0223090:intron 30.0%
! ACAAGATATCTATGTTTTCC+AGG + chr2_1:72590991-72591010 Msa0223090:intron 30.0%
! CAAGATATCTATGTTTTCCA+GGG + chr2_1:72590992-72591011 Msa0223090:intron 30.0%
AAAAAGGCTTCAATTACTCT+TGG + chr2_1:72591159-72591178 Msa0223090:intron 30.0%
!! TAATCAGAAAGTATTGTCAC+AGG - chr2_1:72591347-72591366 None:intergenic 30.0%
!! AGAGTAAAAGCATCATAACT+TGG - chr2_1:72591562-72591581 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG + chr2_1:72591562-72591581 Msa0223090:CDS 30.0%
! GGTGCATTATATTTACGTTT+TGG + chr2_1:72591948-72591967 Msa0223090:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG + chr2_1:72591955-72591974 Msa0223090:CDS 30.0%
!! GACTTGTTTTCTTTAGTACT+TGG + chr2_1:72592072-72592091 Msa0223090:three_prime_UTR 30.0%
TTCTTTAGTACTTGGAGAAT+TGG + chr2_1:72592080-72592099 Msa0223090:three_prime_UTR 30.0%
CTGATTGTCTTGATATTTGA+TGG + chr2_1:72592132-72592151 Msa0223090:three_prime_UTR 30.0%
!!! GTTTGTTGTTGTTTTTGCGA+CGG - chr2_1:72587582-72587601 None:intergenic 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG + chr2_1:72587840-72587859 Msa0223090:CDS 35.0%
TTGGATAGTTTGACATCTAG+TGG + chr2_1:72588093-72588112 Msa0223090:CDS 35.0%
ATCTCCAAATGAACGGTATT+CGG - chr2_1:72588366-72588385 None:intergenic 35.0%
TACCGTTCATTTGGAGATTA+TGG + chr2_1:72588368-72588387 Msa0223090:CDS 35.0%
ACCGTTCATTTGGAGATTAT+GGG + chr2_1:72588369-72588388 Msa0223090:CDS 35.0%
ACCCATAATCTCCAAATGAA+CGG - chr2_1:72588373-72588392 None:intergenic 35.0%
TAGGTTGTTGCAGAAGATTA+GGG + chr2_1:72588422-72588441 Msa0223090:CDS 35.0%
AGAAGTGGTATCATGATCAA+GGG + chr2_1:72588454-72588473 Msa0223090:CDS 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG + chr2_1:72588483-72588502 Msa0223090:CDS 35.0%
GTTCAGTTCATTGATAAGCT+TGG + chr2_1:72588567-72588586 Msa0223090:CDS 35.0%
! ATTTGCCTGTTTAGGATATC+GGG + chr2_1:72588824-72588843 Msa0223090:intron 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG + chr2_1:72588901-72588920 Msa0223090:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG + chr2_1:72588914-72588933 Msa0223090:intron 35.0%
CTTCCCTGCTTCAATATTAA+AGG - chr2_1:72588964-72588983 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG + chr2_1:72589021-72589040 Msa0223090:CDS 35.0%
AAAAGAGATGGATCAGAAGA+CGG + chr2_1:72589088-72589107 Msa0223090:CDS 35.0%
! TCAATTTTCTACAACCACCA+AGG + chr2_1:72589193-72589212 Msa0223090:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG + chr2_1:72589194-72589213 Msa0223090:intron 35.0%
TCAAAAGAAATAGTTCCACC+AGG - chr2_1:72589285-72589304 None:intergenic 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG + chr2_1:72589465-72589484 Msa0223090:intron 35.0%
GGATGATCTTGCATTTAAGA+TGG + chr2_1:72589486-72589505 Msa0223090:intron 35.0%
TATGCACATCCATATTTGGA+TGG + chr2_1:72589511-72589530 Msa0223090:CDS 35.0%
AACAGCTTACATGAAGAGTT+CGG - chr2_1:72589555-72589574 None:intergenic 35.0%
CCATAAGTGAATTTACTCTG+TGG - chr2_1:72589783-72589802 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG + chr2_1:72589780-72589799 Msa0223090:CDS 35.0%
! GATAACACACGTTTTGTGAA+TGG + chr2_1:72589966-72589985 Msa0223090:CDS 35.0%
! TTAACATTTTCCTCCGTTGA+TGG + chr2_1:72590381-72590400 Msa0223090:intron 35.0%
AAAAAATAGTCCATCAACGG+AGG - chr2_1:72590394-72590413 None:intergenic 35.0%
ACTTGTCTAGTTGTATCCTT+TGG + chr2_1:72590490-72590509 Msa0223090:intron 35.0%
CTACTCCTATCTTTGTAGAT+AGG - chr2_1:72590541-72590560 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG + chr2_1:72590544-72590563 Msa0223090:intron 35.0%
ACAAAGATAGGAGTAGTAGA+GGG + chr2_1:72590545-72590564 Msa0223090:intron 35.0%
TAGTCTATAGTGTGCTATAG+CGG + chr2_1:72590592-72590611 Msa0223090:intron 35.0%
! CCGACATCATATAATGGAAA+AGG - chr2_1:72590882-72590901 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG - chr2_1:72590888-72590907 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG + chr2_1:72590887-72590906 Msa0223090:intron 35.0%
AATGTGTAGTTAGAGCTCAA+TGG - chr2_1:72590924-72590943 None:intergenic 35.0%
TCAGTGAACACTTCAATTCA+TGG + chr2_1:72590945-72590964 Msa0223090:intron 35.0%
CATAGATATCTTGTCCTCAA+AGG - chr2_1:72590985-72591004 None:intergenic 35.0%
TAAATAGAAAACATCAGGGC+CGG - chr2_1:72591301-72591320 None:intergenic 35.0%
! TATGATGCTTTTACTCTTGG+TGG + chr2_1:72591565-72591584 Msa0223090:CDS 35.0%
TGTAACCCCTTACAGAATAA+GGG - chr2_1:72591591-72591610 None:intergenic 35.0%
TTGTAACCCCTTACAGAATA+AGG - chr2_1:72591592-72591611 None:intergenic 35.0%
GAATGATCTAGGAAGTTCAA+AGG + chr2_1:72591806-72591825 Msa0223090:CDS 35.0%
GAAGTTCAAAGGATGTCAAA+GGG + chr2_1:72591817-72591836 Msa0223090:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG - chr2_1:72591928-72591947 None:intergenic 35.0%
! CTACTAGTCTAGTATTAGCA+CGG - chr2_1:72592053-72592072 None:intergenic 35.0%
!!! TGGTTTTTATTTTTGCGCCA+AGG + chr2_1:72592152-72592171 Msa0223090:three_prime_UTR 35.0%
!!! GGTTTTTATTTTTGCGCCAA+GGG + chr2_1:72592153-72592172 Msa0223090:three_prime_UTR 35.0%
! AACAAACCCGTTTTCCTCTA+CGG + chr2_1:72587715-72587734 Msa0223090:CDS 40.0%
ATGATTTCTATTGTTCCGGG+CGG + chr2_1:72588039-72588058 Msa0223090:CDS 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG + chr2_1:72588182-72588201 Msa0223090:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG + chr2_1:72588266-72588285 Msa0223090:CDS 40.0%
TGATATGACTGAGAAGGAGA+GGG + chr2_1:72588272-72588291 Msa0223090:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG + chr2_1:72588293-72588312 Msa0223090:CDS 40.0%
AACAGTATTTGAGTCAGGAG+AGG + chr2_1:72588298-72588317 Msa0223090:CDS 40.0%
ACAGTATTTGAGTCAGGAGA+GGG + chr2_1:72588299-72588318 Msa0223090:CDS 40.0%
ACGGTATTCGGCAAAATACA+CGG - chr2_1:72588354-72588373 None:intergenic 40.0%
TTTGCCGAATACCGTTCATT+TGG + chr2_1:72588359-72588378 Msa0223090:CDS 40.0%
TGGAGATTATGGGTATGATG+AGG + chr2_1:72588379-72588398 Msa0223090:CDS 40.0%
TGGGTATGATGAGGAAAGAA+AGG + chr2_1:72588388-72588407 Msa0223090:CDS 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG + chr2_1:72588403-72588422 Msa0223090:CDS 40.0%
CTAGGTTGTTGCAGAAGATT+AGG + chr2_1:72588421-72588440 Msa0223090:CDS 40.0%
GTTGCAGAAGATTAGGGATA+AGG + chr2_1:72588428-72588447 Msa0223090:CDS 40.0%
TTAGGGATAAGGTTCAGAAG+TGG + chr2_1:72588439-72588458 Msa0223090:CDS 40.0%
CAGAAGTGGTATCATGATCA+AGG + chr2_1:72588453-72588472 Msa0223090:CDS 40.0%
TACCAAAGAGGTTGTTTGTG+AGG + chr2_1:72588515-72588534 Msa0223090:CDS 40.0%
AACCTCACAAACAACCTCTT+TGG - chr2_1:72588520-72588539 None:intergenic 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG + chr2_1:72588525-72588544 Msa0223090:CDS 40.0%
AAGCTTGGCAATGTTGTTGA+AGG + chr2_1:72588582-72588601 Msa0223090:CDS 40.0%
AAGCTCTCTATGTATCACAG+GGG - chr2_1:72588619-72588638 None:intergenic 40.0%
GAAGCTCTCTATGTATCACA+GGG - chr2_1:72588620-72588639 None:intergenic 40.0%
AACAACCCGATATCCTAAAC+AGG - chr2_1:72588832-72588851 None:intergenic 40.0%
! ACTGAATGGAGTATTATCCC+TGG + chr2_1:72589122-72589141 Msa0223090:CDS 40.0%
! CAGAAGTACAATACCAGAGT+TGG - chr2_1:72589161-72589180 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG - chr2_1:72589349-72589368 None:intergenic 40.0%
AATGAAGAATCTCAGCAGAC+TGG - chr2_1:72589392-72589411 None:intergenic 40.0%
CATCCTAGCAGAAAACATGA+AGG - chr2_1:72589471-72589490 None:intergenic 40.0%
GGAGTATGCACATCCATATT+TGG + chr2_1:72589507-72589526 Msa0223090:CDS 40.0%
TGAATACTGGACTCAGCTTT+CGG - chr2_1:72589585-72589604 None:intergenic 40.0%
!! AATGGTCAAAGAGTACTACC+TGG + chr2_1:72589855-72589874 Msa0223090:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG + chr2_1:72589978-72589997 Msa0223090:CDS 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG - chr2_1:72590308-72590327 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG - chr2_1:72590377-72590396 None:intergenic 40.0%
! ATATCTATGTTTTCCAGGGC+CGG + chr2_1:72590996-72591015 Msa0223090:intron 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG + chr2_1:72591274-72591293 Msa0223090:intron 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG + chr2_1:72591275-72591294 Msa0223090:intron 40.0%
TAAACCGTGTCAGAGTTAGT+TGG - chr2_1:72591447-72591466 None:intergenic 40.0%
! GTTTATCCAGTTGATGTCTG+TGG + chr2_1:72591462-72591481 Msa0223090:CDS 40.0%
TTCTGTAAGGGGTTACAACA+TGG + chr2_1:72591594-72591613 Msa0223090:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG + chr2_1:72591595-72591614 Msa0223090:CDS 40.0%
GAGTTACGGATACCTGTTAA+AGG + chr2_1:72591753-72591772 Msa0223090:CDS 40.0%
TACACATGCATGCCTTTAAC+AGG - chr2_1:72591768-72591787 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG + chr2_1:72591768-72591787 Msa0223090:CDS 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG + chr2_1:72591784-72591803 Msa0223090:CDS 40.0%
GGAAGTTCAAAGGATGTCAA+AGG + chr2_1:72591816-72591835 Msa0223090:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG - chr2_1:72591845-72591864 None:intergenic 40.0%
ATTCGCCTATAGACTTCTGT+AGG - chr2_1:72591846-72591865 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG + chr2_1:72591845-72591864 Msa0223090:CDS 40.0%
ACAGAAGTCTATAGGCGAAT+GGG + chr2_1:72591846-72591865 Msa0223090:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG + chr2_1:72591864-72591883 Msa0223090:CDS 40.0%
CAAGGTTCATCTTATGGTGT+TGG + chr2_1:72591870-72591889 Msa0223090:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG + chr2_1:72591921-72591940 Msa0223090:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG + chr2_1:72591927-72591946 Msa0223090:CDS 40.0%
CTCGTTCCATCCAACAACTT+CGG + chr2_1:72587538-72587557 Msa0223090:CDS 45.0%
TTGATGCATTGAGGGAGAGA+GGG - chr2_1:72587604-72587623 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG - chr2_1:72587612-72587631 None:intergenic 45.0%
! TGAGAGCAGTTGATGCATTG+AGG - chr2_1:72587613-72587632 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG - chr2_1:72587701-72587720 None:intergenic 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG - chr2_1:72587707-72587726 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG - chr2_1:72587711-72587730 None:intergenic 45.0%
ACAAATGCCGATGGAACTGT+TGG + chr2_1:72588147-72588166 Msa0223090:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG - chr2_1:72588157-72588176 None:intergenic 45.0%
CGATGGAACTGTTGGAATCA+CGG + chr2_1:72588155-72588174 Msa0223090:CDS 45.0%
! AACTCAATCGGCTTTGTCTG+CGG - chr2_1:72588246-72588265 None:intergenic 45.0%
CTGATATGACTGAGAAGGAG+AGG + chr2_1:72588271-72588290 Msa0223090:CDS 45.0%
GTATAAGAGGAGGATGGAGA+AGG + chr2_1:72588323-72588342 Msa0223090:CDS 45.0%
GGAAGCTCTCTATGTATCAC+AGG - chr2_1:72588621-72588640 None:intergenic 45.0%
ACATAGAGAGCTTCCCAAAG+AGG + chr2_1:72588626-72588645 Msa0223090:CDS 45.0%
ATTGGATTAACAGCTGCGTC+CGG + chr2_1:72588932-72588951 Msa0223090:intron 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG + chr2_1:72589300-72589319 Msa0223090:CDS 45.0%
GGACTGAATAGAGCTCTTAG+TGG + chr2_1:72589321-72589340 Msa0223090:CDS 45.0%
ACATGAAGAGTTCGGTTTCG+TGG - chr2_1:72589547-72589566 None:intergenic 45.0%
AAGCTGAGTCCAGTATTCAC+TGG + chr2_1:72589586-72589605 Msa0223090:CDS 45.0%
AGCTGAGTCCAGTATTCACT+GGG + chr2_1:72589587-72589606 Msa0223090:CDS 45.0%
! TGGATGAAGTGCCACCAATA+TGG + chr2_1:72589620-72589639 Msa0223090:CDS 45.0%
! GGATGAAGTGCCACCAATAT+GGG + chr2_1:72589621-72589640 Msa0223090:CDS 45.0%
GAGATAACAACTCGTGACGA+AGG + chr2_1:72589816-72589835 Msa0223090:CDS 45.0%
!! TGGTACTGGCATTGATCACA+TGG + chr2_1:72589917-72589936 Msa0223090:CDS 45.0%
TGGAGCGAGAAATATGTTCC+AGG + chr2_1:72589998-72590017 Msa0223090:CDS 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG + chr2_1:72590551-72590570 Msa0223090:intron 45.0%
GTAGTAGAGGGAACAGGTTA+AGG + chr2_1:72590557-72590576 Msa0223090:intron 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG - chr2_1:72590695-72590714 None:intergenic 45.0%
TTACGGCTGCTAAATGCTTC+AGG + chr2_1:72590695-72590714 Msa0223090:intron 45.0%
TACGGCTGCTAAATGCTTCA+GGG + chr2_1:72590696-72590715 Msa0223090:intron 45.0%
TCCAACTTGCACTACCTTTG+AGG + chr2_1:72590968-72590987 Msa0223090:intron 45.0%
TCCTCAAAGGTAGTGCAAGT+TGG - chr2_1:72590972-72590991 None:intergenic 45.0%
TGCAAACTGCAGGTAGATCA+AGG + chr2_1:72591382-72591401 Msa0223090:intron 45.0%
GCGATTGAAGAATGGGAACT+GGG - chr2_1:72591422-72591441 None:intergenic 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG - chr2_1:72591429-72591448 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG - chr2_1:72591430-72591449 None:intergenic 45.0%
! TATCCAGTTGATGTCTGTGG+AGG + chr2_1:72591465-72591484 Msa0223090:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG + chr2_1:72591581-72591600 Msa0223090:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG + chr2_1:72591582-72591601 Msa0223090:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG + chr2_1:72591604-72591623 Msa0223090:CDS 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG + chr2_1:72591783-72591802 Msa0223090:CDS 45.0%
GGAACCCTACAGAAGTCTAT+AGG + chr2_1:72591838-72591857 Msa0223090:CDS 45.0%
TGGATTCTGCAATGATCCCT+TGG - chr2_1:72592172-72592191 None:intergenic 45.0%
! TATGGTGTCAGTTGTTCCTG+TGG - chr2_1:72592192-72592211 None:intergenic 45.0%
GGATGGAACGAGAGAAGACA+TGG - chr2_1:72587530-72587549 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG + chr2_1:72587541-72587560 Msa0223090:CDS 50.0%
!!! GTTGTTGTTTTTGCGACGGC+CGG - chr2_1:72587578-72587597 None:intergenic 50.0%
GTTGATGCATTGAGGGAGAG+AGG - chr2_1:72587605-72587624 None:intergenic 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG - chr2_1:72587724-72587743 None:intergenic 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG - chr2_1:72587725-72587744 None:intergenic 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG + chr2_1:72587802-72587821 Msa0223090:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG + chr2_1:72587827-72587846 Msa0223090:CDS 50.0%
TCATCAGCAATAGCTGCTGC+CGG - chr2_1:72587862-72587881 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG + chr2_1:72588074-72588093 Msa0223090:CDS 50.0%
GAAGGGAAGACAAATGCCGA+TGG + chr2_1:72588138-72588157 Msa0223090:CDS 50.0%
GCAGACAAAGCCGATTGAGT+TGG + chr2_1:72588245-72588264 Msa0223090:CDS 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG + chr2_1:72588310-72588329 Msa0223090:CDS 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG + chr2_1:72588313-72588332 Msa0223090:CDS 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG + chr2_1:72588317-72588336 Msa0223090:CDS 50.0%
AGGGTATGCTTGTGCTTCAG+TGG + chr2_1:72588473-72588492 Msa0223090:CDS 50.0%
TTGGATTAACAGCTGCGTCC+GGG + chr2_1:72588933-72588952 Msa0223090:intron 50.0%
! TCACTAGTCTCATCAGGCCT+TGG - chr2_1:72589041-72589060 None:intergenic 50.0%
AAGGCCTGATGAGACTAGTG+AGG + chr2_1:72589040-72589059 Msa0223090:CDS 50.0%
AGGCCTGATGAGACTAGTGA+GGG + chr2_1:72589041-72589060 Msa0223090:CDS 50.0%
! CGGCTGATGTCAGTACTGAA+TGG + chr2_1:72589108-72589127 Msa0223090:CDS 50.0%
! TGGAGTATTATCCCTGGACG+TGG + chr2_1:72589128-72589147 Msa0223090:CDS 50.0%
AGTATTATCCCTGGACGTGG+AGG + chr2_1:72589131-72589150 Msa0223090:CDS 50.0%
GTATTATCCCTGGACGTGGA+GGG + chr2_1:72589132-72589151 Msa0223090:CDS 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG - chr2_1:72589274-72589293 None:intergenic 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG - chr2_1:72589358-72589377 None:intergenic 50.0%
CAGCAACTTCTTCAACCCTC+AGG + chr2_1:72589356-72589375 Msa0223090:CDS 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG - chr2_1:72589374-72589393 None:intergenic 50.0%
GCTGAGTCCAGTATTCACTG+GGG + chr2_1:72589588-72589607 Msa0223090:CDS 50.0%
CTGAGTCCAGTATTCACTGG+GGG + chr2_1:72589589-72589608 Msa0223090:CDS 50.0%
!! CCACCAATATGGGTTGATCG+CGG + chr2_1:72589631-72589650 Msa0223090:CDS 50.0%
CTGTGGCGTGAAATTCTGCT+TGG - chr2_1:72589766-72589785 None:intergenic 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG + chr2_1:72589858-72589877 Msa0223090:CDS 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG + chr2_1:72589861-72589880 Msa0223090:CDS 50.0%
TCTGCACTAATTCCACCACC+AGG - chr2_1:72589876-72589895 None:intergenic 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG + chr2_1:72589876-72589895 Msa0223090:CDS 50.0%
! TGACGGATGAGATAGTCACC+TGG - chr2_1:72590019-72590038 None:intergenic 50.0%
CGCAGCTATTCGCACCATTA+CGG + chr2_1:72590678-72590697 Msa0223090:intron 50.0%
ACGGCTGCTAAATGCTTCAG+GGG + chr2_1:72590697-72590716 Msa0223090:intron 50.0%
GTAGATCAAGGCCTAGGCAT+TGG + chr2_1:72591394-72591413 Msa0223090:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG - chr2_1:72591423-72591442 None:intergenic 50.0%
GCCACCAACTAACTCTGACA+CGG + chr2_1:72591440-72591459 Msa0223090:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG - chr2_1:72591444-72591463 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG - chr2_1:72591471-72591490 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG + chr2_1:72591469-72591488 Msa0223090:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG + chr2_1:72591583-72591602 Msa0223090:CDS 50.0%
TCCTACCTCCAGCATGTTTC+TGG - chr2_1:72591635-72591654 None:intergenic 50.0%
CACAGCTTGCAGCTGAGTTA+CGG + chr2_1:72591739-72591758 Msa0223090:intron 50.0%
GCAGAGCATGGGAATGATCT+AGG + chr2_1:72591795-72591814 Msa0223090:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG + chr2_1:72591852-72591871 Msa0223090:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG + chr2_1:72591882-72591901 Msa0223090:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG + chr2_1:72591887-72591906 Msa0223090:CDS 50.0%
TGCTCTGACCAAACCAAGCT+TGG - chr2_1:72591898-72591917 None:intergenic 50.0%
GGGATCATTGCAGAATCCAC+AGG + chr2_1:72592173-72592192 Msa0223090:three_prime_UTR 50.0%
TGAGGGGTTTGAAGACACGG+CGG - chr2_1:72587648-72587667 None:intergenic 55.0%
CGGTGAGGGGTTTGAAGACA+CGG - chr2_1:72587651-72587670 None:intergenic 55.0%
TTCCTCTACGGCAACACCAC+TGG + chr2_1:72587727-72587746 Msa0223090:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG + chr2_1:72587739-72587758 Msa0223090:CDS 55.0%
!! GGTGGTGGTGGTGGAAGTAA+TGG + chr2_1:72587760-72587779 Msa0223090:CDS 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG + chr2_1:72587763-72587782 Msa0223090:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG + chr2_1:72587769-72587788 Msa0223090:CDS 55.0%
GGAAGTAATGGTGGCAGTGG+TGG + chr2_1:72587772-72587791 Msa0223090:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG + chr2_1:72587775-72587794 Msa0223090:CDS 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG + chr2_1:72587805-72587824 Msa0223090:CDS 55.0%
TTTGGAGGAGGAAACGGAGG+AGG + chr2_1:72587808-72587827 Msa0223090:CDS 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG + chr2_1:72587821-72587840 Msa0223090:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG + chr2_1:72588052-72588071 Msa0223090:CDS 55.0%
TCCGGGCGGAGTTTACACAA+GGG + chr2_1:72588053-72588072 Msa0223090:CDS 55.0%
! CACAAGGGCGCAACTACAGA+AGG + chr2_1:72588068-72588087 Msa0223090:CDS 55.0%
AGAGGAGGATGGAGAAGGCT+AGG + chr2_1:72588328-72588347 Msa0223090:CDS 55.0%
! CCTCCCTCACTAGTCTCATC+AGG - chr2_1:72589047-72589066 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG + chr2_1:72589044-72589063 Msa0223090:CDS 55.0%
TTGGATACCCTCCACGTCCA+GGG - chr2_1:72589142-72589161 None:intergenic 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG + chr2_1:72589145-72589164 Msa0223090:CDS 55.0%
GTTCAGGCCTCACTTCAACC+TGG + chr2_1:72589264-72589283 Msa0223090:intron 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG - chr2_1:72589375-72589394 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG - chr2_1:72589634-72589653 None:intergenic 55.0%
CCACCGCGATCAACCCATAT+TGG - chr2_1:72589637-72589656 None:intergenic 55.0%
!! CCAATATGGGTTGATCGCGG+TGG + chr2_1:72589634-72589653 Msa0223090:CDS 55.0%
GATCAATGCCAGTACCACCG+AGG - chr2_1:72589914-72589933 None:intergenic 55.0%
CGGCTGCTAAATGCTTCAGG+GGG + chr2_1:72590698-72590717 Msa0223090:intron 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG - chr2_1:72591030-72591049 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr2_1:72591031-72591050 Msa0223090:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG - chr2_1:72591038-72591057 None:intergenic 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG - chr2_1:72591039-72591058 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG + chr2_1:72591388-72591407 Msa0223090:intron 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG + chr2_1:72591475-72591494 Msa0223090:CDS 55.0%
ATGGAGGACAAGAACTGGCG+GGG - chr2_1:72591509-72591528 None:intergenic 55.0%
CATGGAGGACAAGAACTGGC+GGG - chr2_1:72591510-72591529 None:intergenic 55.0%
CCATGGAGGACAAGAACTGG+CGG - chr2_1:72591511-72591530 None:intergenic 55.0%
CGCCTACACAACCACCATAG+CGG - chr2_1:72591534-72591553 None:intergenic 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG + chr2_1:72591624-72591643 Msa0223090:CDS 55.0%
TGCTGCCAGAAACATGCTGG+AGG + chr2_1:72591627-72591646 Msa0223090:CDS 55.0%
GCCAGAAACATGCTGGAGGT+AGG + chr2_1:72591631-72591650 Msa0223090:intron 55.0%
CGTAACTCAGCTGCAAGCTG+TGG - chr2_1:72591741-72591760 None:intergenic 55.0%
GTGCCGCCGAAGTTGTTGGA+TGG - chr2_1:72587547-72587566 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG - chr2_1:72587551-72587570 None:intergenic 60.0%
TTCGGCGGCACCATCTTGTC+CGG + chr2_1:72587556-72587575 Msa0223090:CDS 60.0%
TTTGCGACGGCCGGACAAGA+TGG - chr2_1:72587569-72587588 None:intergenic 60.0%
TTTGAAGACACGGCGGCGAC+GGG - chr2_1:72587641-72587660 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG - chr2_1:72587642-72587661 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG - chr2_1:72587683-72587702 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG - chr2_1:72587695-72587714 None:intergenic 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG - chr2_1:72587732-72587751 None:intergenic 60.0%
CTCTACGGCAACACCACTGG+TGG + chr2_1:72587730-72587749 Msa0223090:CDS 60.0%
TACGGCAACACCACTGGTGG+TGG + chr2_1:72587733-72587752 Msa0223090:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG + chr2_1:72587742-72587761 Msa0223090:CDS 60.0%
ACCACCATGTCCACCACCAG+TGG - chr2_1:72587746-72587765 None:intergenic 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG + chr2_1:72587745-72587764 Msa0223090:CDS 60.0%
!! AATGGTGGCAGTGGTGGTGG+AGG + chr2_1:72587778-72587797 Msa0223090:CDS 60.0%
!! GGTGGTGGAGGTTGGTGGTT+TGG + chr2_1:72587790-72587809 Msa0223090:CDS 60.0%
!! GGTGGAGGTTGGTGGTTTGG+AGG + chr2_1:72587793-72587812 Msa0223090:CDS 60.0%
!! GGAGGTTGGTGGTTTGGAGG+AGG + chr2_1:72587796-72587815 Msa0223090:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG - chr2_1:72588057-72588076 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG - chr2_1:72589143-72589162 None:intergenic 60.0%
CAGGCCTCACTTCAACCTGG+TGG + chr2_1:72589267-72589286 Msa0223090:intron 60.0%
TGGTGGCACTTCATCCAGCC+CGG - chr2_1:72589617-72589636 None:intergenic 60.0%
GATGGACCTCCTACCAGCCT+CGG + chr2_1:72589894-72589913 Msa0223090:CDS 60.0%
AATGCCAGTACCACCGAGGC+TGG - chr2_1:72589910-72589929 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG + chr2_1:72590611-72590630 Msa0223090:intron 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG + chr2_1:72591003-72591022 Msa0223090:intron 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG + chr2_1:72591004-72591023 Msa0223090:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr2_1:72591022-72591041 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr2_1:72591023-72591042 Msa0223090:intron 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr2_1:72591024-72591043 Msa0223090:intron 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG + chr2_1:72591279-72591298 Msa0223090:intron 60.0%
GGAACTGGGTGCCAATGCCT+AGG - chr2_1:72591408-72591427 None:intergenic 60.0%
TGGAGGACAAGAACTGGCGG+GGG - chr2_1:72591508-72591527 None:intergenic 60.0%
CCGCCAGTTCTTGTCCTCCA+TGG + chr2_1:72591508-72591527 Msa0223090:CDS 60.0%
CGGCCATGGAGGACAAGAAC+TGG - chr2_1:72591514-72591533 None:intergenic 60.0%
CTTGTCCTCCATGGCCGCTA+TGG + chr2_1:72591517-72591536 Msa0223090:CDS 60.0%
AACCACCATAGCGGCCATGG+AGG - chr2_1:72591525-72591544 None:intergenic 60.0%
CACAACCACCATAGCGGCCA+TGG - chr2_1:72591528-72591547 None:intergenic 60.0%
GGCCGCTATGGTGGTTGTGT+AGG + chr2_1:72591529-72591548 Msa0223090:CDS 60.0%
!! GGTGGTGGACATGGTGGTGG+TGG + chr2_1:72587748-72587767 Msa0223090:CDS 65.0%
!! GGTGGACATGGTGGTGGTGG+TGG + chr2_1:72587751-72587770 Msa0223090:CDS 65.0%
!! GTGGCAGTGGTGGTGGAGGT+TGG + chr2_1:72587782-72587801 Msa0223090:CDS 65.0%
!! GCAGTGGTGGTGGAGGTTGG+TGG + chr2_1:72587785-72587804 Msa0223090:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG + chr2_1:72587811-72587830 Msa0223090:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG + chr2_1:72587814-72587833 Msa0223090:CDS 65.0%
CCAGTATTCACTGGGGGCCC+CGG + chr2_1:72589595-72589614 Msa0223090:CDS 65.0%
CAGTATTCACTGGGGGCCCC+GGG + chr2_1:72589596-72589615 Msa0223090:CDS 65.0%
GTGGCACTTCATCCAGCCCG+GGG - chr2_1:72589615-72589634 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG - chr2_1:72589616-72589635 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG - chr2_1:72589903-72589922 None:intergenic 65.0%
CCAGTACCACCGAGGCTGGT+AGG - chr2_1:72589906-72589925 None:intergenic 65.0%
CCTACCAGCCTCGGTGGTAC+TGG + chr2_1:72589903-72589922 Msa0223090:CDS 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr2_1:72591018-72591037 None:intergenic 65.0%
GGCCGGCCCTAGAGACTAAG+AGG - chr2_1:72591284-72591303 None:intergenic 65.0%
AGGACAAGAACTGGCGGGGG+TGG - chr2_1:72591505-72591524 None:intergenic 65.0%
GTCCTCCATGGCCGCTATGG+TGG + chr2_1:72591520-72591539 Msa0223090:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG - chr2_1:72587637-72587656 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG - chr2_1:72587665-72587684 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG - chr2_1:72587666-72587685 None:intergenic 70.0%
GGAGGAAACGGCGACGGTGG+CGG - chr2_1:72587671-72587690 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG - chr2_1:72587677-72587696 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG - chr2_1:72587692-72587711 None:intergenic 70.0%
CCGGGGCCCCCAGTGAATAC+TGG - chr2_1:72589598-72589617 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG + chr2_1:72589897-72589916 Msa0223090:CDS 70.0%
! ACGGCGACGGTGGCGGTGAG+GGG - chr2_1:72587664-72587683 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG - chr2_1:72587674-72587693 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG - chr2_1:72587689-72587708 None:intergenic 75.0%
ATTCACTGGGGGCCCCGGGC+TGG + chr2_1:72589600-72589619 Msa0223090:CDS 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG - chr2_1:72591012-72591031 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_1 gene 72587488 72592222 72587488 ID=Msa0223090;Name=Msa0223090
chr2_1 mRNA 72587488 72592222 72587488 ID=Msa0223090-mRNA-1;Parent=Msa0223090;Name=Msa0223090-mRNA-1;_AED=0.04;_eAED=0.04;_QI=41|1|0.85|1|1|1|7|239|794
chr2_1 exon 72587488 72588647 72587488 ID=Msa0223090-mRNA-1:exon:21020;Parent=Msa0223090-mRNA-1
chr2_1 exon 72588945 72589166 72588945 ID=Msa0223090-mRNA-1:exon:21021;Parent=Msa0223090-mRNA-1
chr2_1 exon 72589270 72589377 72589270 ID=Msa0223090-mRNA-1:exon:21022;Parent=Msa0223090-mRNA-1
chr2_1 exon 72589487 72589678 72589487 ID=Msa0223090-mRNA-1:exon:21023;Parent=Msa0223090-mRNA-1
chr2_1 exon 72589771 72590019 72589771 ID=Msa0223090-mRNA-1:exon:21024;Parent=Msa0223090-mRNA-1
chr2_1 exon 72591394 72591648 72591394 ID=Msa0223090-mRNA-1:exon:21025;Parent=Msa0223090-mRNA-1
chr2_1 exon 72591744 72592222 72591744 ID=Msa0223090-mRNA-1:exon:21026;Parent=Msa0223090-mRNA-1
chr2_1 five_prime_UTR 72587488 72587528 72587488 ID=Msa0223090-mRNA-1:five_prime_utr;Parent=Msa0223090-mRNA-1
chr2_1 CDS 72587529 72588647 72587529 ID=Msa0223090-mRNA-1:cds;Parent=Msa0223090-mRNA-1
chr2_1 CDS 72588945 72589166 72588945 ID=Msa0223090-mRNA-1:cds;Parent=Msa0223090-mRNA-1
chr2_1 CDS 72589270 72589377 72589270 ID=Msa0223090-mRNA-1:cds;Parent=Msa0223090-mRNA-1
chr2_1 CDS 72589487 72589678 72589487 ID=Msa0223090-mRNA-1:cds;Parent=Msa0223090-mRNA-1
chr2_1 CDS 72589771 72590019 72589771 ID=Msa0223090-mRNA-1:cds;Parent=Msa0223090-mRNA-1
chr2_1 CDS 72591394 72591648 72591394 ID=Msa0223090-mRNA-1:cds;Parent=Msa0223090-mRNA-1
chr2_1 CDS 72591744 72591983 72591744 ID=Msa0223090-mRNA-1:cds;Parent=Msa0223090-mRNA-1
chr2_1 three_prime_UTR 72591984 72592222 72591984 ID=Msa0223090-mRNA-1:three_prime_utr;Parent=Msa0223090-mRNA-1
Gene Sequence

>Msa0223090

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTGTCCGGCCGTCGCAAAAACAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGAGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACAAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAAAGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTGTGATACATAGAGAGCTTCCCAAAGAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGTTCCATAACAACCAGCAACTTCTTCAACCCTCAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATGTAAGCTGTTTCAATAGCCGAAAGCTGAGTCCAGTATTCACTGGGGGCCCCGGGCTGGATGAAGTGCCACCAATATGGGTTGATCGCGGTGGTGTCAAAGCTAATATTACAGAGAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA
Protein sequence

>Msa0223090

MSSLVPSNNFGGTILSGRRKNNNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGGSNGGSGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTKEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPVIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHVSCFNSRKLSPVFTGGPGLDEVPPIWVDRGGVKANITENFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF*