AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0302640

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302640 MtrunA17_Chr2g0328601 88.428 795 39 5 1 756 11 791 0.0 1365
Msa0302640 MtrunA17_Chr4g0031981 73.806 691 143 1 104 756 114 804 0.0 1090
Msa0302640 MtrunA17_Chr5g0400161 88.889 72 8 0 620 691 1 72 3.05e-39 139
Msa0302640 MtrunA17_Chr2g0328911 24.174 484 294 18 294 740 286 733 1.43e-20 97.1
Msa0302640 MtrunA17_Chr1g0184291 31.156 199 110 7 551 740 165 345 2.70e-13 72.0
Msa0302640 MtrunA17_Chr2g0322151 30.968 155 92 3 591 740 200 344 1.24e-12 70.1
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0302640 AT3G46740.1 71.449 690 159 1 105 756 129 818 0.0 1061
Msa0302640 AT4G09080.1 55.663 415 125 7 382 756 1 396 1.04e-145 432
Msa0302640 AT1G35860.1 50.207 482 147 8 258 731 3 399 1.47e-145 432
Msa0302640 AT4G09080.2 55.663 415 125 7 382 756 12 407 2.42e-145 432
Msa0302640 AT4G09080.3 62.154 325 82 3 472 756 2 325 1.82e-134 401
Msa0302640 AT5G19620.1 23.171 492 299 14 294 744 269 722 2.88e-22 102
Msa0302640 AT3G44160.1 28.986 207 122 7 515 712 122 312 2.50e-13 72.8

Find 252 sgRNAs with CRISPR-Local

Find 410 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACCGTTCATTTGGAGATTA+TGG 0.115100 2_3:+59445959 Msa0302640:CDS
CTTCCCTGCTTCAATATTAA+AGG 0.116562 2_3:-59446552 None:intergenic
TCCTACCTCCAGCATGTTTC+TGG 0.139062 2_3:-59449224 None:intergenic
AATATTATATTATACCTCTT+TGG 0.227884 2_3:-59446231 None:intergenic
TGTGCTTCAGTGGTTAATTT+TGG 0.227908 2_3:+59446074 Msa0302640:CDS
TTGTAACCCCTTACAGAATA+AGG 0.240655 2_3:-59449181 None:intergenic
GGTGGTGGTGGTTGGTGGTT+TGG 0.241659 2_3:+59445381 Msa0302640:CDS
AGGCATAATTGTTGAAATTA+AGG 0.242334 2_3:+59446655 Msa0302640:CDS
TGAAATGATTTCTATTGTTC+CGG 0.291518 2_3:+59445626 Msa0302640:CDS
GGTGCATTATATTTACGTTT+TGG 0.299305 2_3:+59449540 Msa0302640:CDS
CTAGGTTGTTGCAGAAGATT+AGG 0.307809 2_3:+59446012 Msa0302640:CDS
ATATTATATTATACCTCTTT+GGG 0.310138 2_3:-59446230 None:intergenic
CTGATTGTCTTGATATTTGA+TGG 0.314401 2_3:+59449724 Msa0302640:three_prime_UTR
GGAGTATGCACATCCATATT+TGG 0.314750 2_3:+59447099 Msa0302640:CDS
GGTGGACATGGTGGTGGTGG+TGG 0.322426 2_3:+59445342 Msa0302640:CDS
TTCTTTAGTACTTGGAGAAT+TGG 0.326717 2_3:+59449672 Msa0302640:three_prime_UTR
TTATCTACACCATCCAAATA+TGG 0.337762 2_3:-59447112 None:intergenic
TTGGTGGCCCTTATTCTGTA+AGG 0.339722 2_3:+59449173 Msa0302640:CDS
GTGGCAGTGGTGGTGGTGGT+TGG 0.342843 2_3:+59445373 Msa0302640:CDS
ATCTCCAAATGAACGGTATT+CGG 0.343587 2_3:-59445954 None:intergenic
GAAGAAGTTGCTGGTTGTTA+TGG 0.346483 2_3:-59446938 None:intergenic
ACCGTTCATTTGGAGATTAT+GGG 0.350361 2_3:+59445960 Msa0302640:CDS
GGTGGTGGTTGGTGGTTTGG+AGG 0.353180 2_3:+59445384 Msa0302640:CDS
AGTAATGGTGGCAGTGGTGG+TGG 0.354370 2_3:+59445366 Msa0302640:CDS
CCACAGAGTAAATTCACTTA+TGG 0.360623 2_3:+59447372 Msa0302640:CDS
TTTGCCGAATACCGTTCATT+TGG 0.363887 2_3:+59445950 Msa0302640:CDS
GCAGTGGTGGTGGTGGTTGG+TGG 0.370831 2_3:+59445376 Msa0302640:CDS
GAGTTACGGATACCTGTTAA+AGG 0.374913 2_3:+59449345 Msa0302640:CDS
AACCTCACAAACAACCTCTT+TGG 0.380682 2_3:-59446108 None:intergenic
ATGGGTCAAGGTTCATCTTA+TGG 0.381032 2_3:+59449456 Msa0302640:CDS
GGAGGAAACGGAGGAGGAGG+AGG 0.384034 2_3:+59445405 Msa0302640:CDS
GCAGAGCATGGGAATGATCT+AGG 0.384359 2_3:+59449387 Msa0302640:CDS
GGAGGAGGAAACGGAGGAGG+AGG 0.387801 2_3:+59445402 Msa0302640:CDS
GTTGCAGAAGATTAGGGATA+AGG 0.390963 2_3:+59446019 Msa0302640:CDS
GGTAATCAAATTTGTGCAAA+TGG 0.394320 2_3:+59447429 Msa0302640:CDS
GTCAGGAGAGGGAGTATAAG+AGG 0.396728 2_3:+59445901 Msa0302640:CDS
TTTGAAAAGGTTGATCTTGA+AGG 0.399772 2_3:+59445711 Msa0302640:CDS
TTTCATATAGTGAGAGTACT+TGG 0.399955 2_3:+59445769 Msa0302640:CDS
AAGAAAGGAGTTTGAGTGCT+AGG 0.400808 2_3:+59445994 Msa0302640:CDS
TACACATGCATGCCTTTAAC+AGG 0.406430 2_3:-59449357 None:intergenic
GGTGGTTGGTGGTTTGGAGG+AGG 0.407252 2_3:+59445387 Msa0302640:CDS
ATTCACTTATGGACTTGTAA+TGG 0.409835 2_3:+59447383 Msa0302640:CDS
TGGTGGTTTGGAGGAGGAAA+CGG 0.413877 2_3:+59445393 Msa0302640:CDS
GAAATGATTTCTATTGTTCC+GGG 0.419998 2_3:+59445627 Msa0302640:CDS
AGTTGGTGGCGATTGAAGAA+TGG 0.421149 2_3:-59449019 None:intergenic
GGTGGTGGACATGGTGGTGG+TGG 0.421380 2_3:+59445339 Msa0302640:CDS
TCACTAGTCTCATCAGGCCT+TGG 0.424601 2_3:-59446629 None:intergenic
GGCGATTGAAGAATGGGAAC+TGG 0.425859 2_3:-59449012 None:intergenic
AACACCTTTAATATTGAAGC+AGG 0.427152 2_3:+59446548 Msa0302640:CDS
ACTGGTGGTGGACATGGTGG+TGG 0.430184 2_3:+59445336 Msa0302640:CDS
CTTCCTCCACAGACATCAAC+TGG 0.431035 2_3:-59449060 None:intergenic
GACGGCAATGGCAGCGGCGG+AGG 0.431131 2_3:-59445277 None:intergenic
GGAAGTAATGGTGGCAGTGG+TGG 0.431759 2_3:+59445363 Msa0302640:CDS
TGGTGGCCCTTATTCTGTAA+GGG 0.436401 2_3:+59449174 Msa0302640:CDS
CACAGCTTGCAGCTGAGTTA+CGG 0.437484 2_3:+59449331 Msa0302640:intron
GGCGCAACTACAGAAGGAAT+TGG 0.439427 2_3:+59445665 Msa0302640:CDS
AATGGCAGCGGCGGAGGAAA+CGG 0.440792 2_3:-59445271 None:intergenic
ATTGGATTAACAGCTGCGTC+CGG 0.441537 2_3:+59446523 Msa0302640:intron
CCTACCAGCCTCGGTGGTAC+TGG 0.441855 2_3:+59447495 Msa0302640:CDS
AATTGAATAGTTATATTGAC+AGG 0.454818 2_3:-59445507 None:intergenic
CAAGGTTCATCTTATGGTGT+TGG 0.455140 2_3:+59449462 Msa0302640:CDS
CCTCCCTCACTAGTCTCATC+AGG 0.456399 2_3:-59446635 None:intergenic
AACGGCGACGGTGGCGGTGA+GGG 0.457185 2_3:-59445253 None:intergenic
GGTGGTGGTGGTGGAAGTAA+TGG 0.462440 2_3:+59445351 Msa0302640:CDS
GTTGGTGGCGATTGAAGAAT+GGG 0.462764 2_3:-59449018 None:intergenic
TGTTGGTGCCAAGCTTGGTT+TGG 0.462992 2_3:+59449479 Msa0302640:CDS
TGCTCTGACCAAACCAAGCT+TGG 0.463681 2_3:-59449487 None:intergenic
GTTCAGTTCATTGATAAGCT+TGG 0.463790 2_3:+59446158 Msa0302640:CDS
AATGGTGGCAGTGGTGGTGG+TGG 0.465319 2_3:+59445369 Msa0302640:CDS
CTTGTCCTCCATGGCCGCTA+TGG 0.467464 2_3:+59449109 Msa0302640:CDS
CTGAGGGTTGAAGAAGTTGC+TGG 0.470561 2_3:-59446947 None:intergenic
TTTGGAGGAGGAAACGGAGG+AGG 0.471711 2_3:+59445399 Msa0302640:CDS
GTGTTGCCGTAGAGGAAAAC+GGG 0.473372 2_3:-59445312 None:intergenic
TTTGAAGACACGGCGGCGAC+GGG 0.474675 2_3:-59445229 None:intergenic
GGATGATCTTGCATTTAAGA+TGG 0.475394 2_3:+59447078 Msa0302640:intron
CGGCCATGGAGGACAAGAAC+TGG 0.475573 2_3:-59449103 None:intergenic
TTTGCGACGGCCGGATAAGA+TGG 0.476584 2_3:-59445157 None:intergenic
CAGAAGTGGTATCATGATCA+AGG 0.480113 2_3:+59446044 Msa0302640:CDS
GTTGATCATAACTCAGGAAC+TGG 0.481477 2_3:+59449519 Msa0302640:CDS
TTCGGCGGCACCATCTTATC+CGG 0.481622 2_3:+59445147 Msa0302640:CDS
TATGGTGTTGGTGCCAAGCT+TGG 0.481755 2_3:+59449474 Msa0302640:CDS
GGTTACAACATGGGTGAACT+TGG 0.484076 2_3:+59449196 Msa0302640:CDS
GGAGGAAACGGCGACGGTGG+CGG 0.484981 2_3:-59445259 None:intergenic
TAGGTTGTTGCAGAAGATTA+GGG 0.486333 2_3:+59446013 Msa0302640:CDS
ACATGAAGAGTTCGGTTTCG+TGG 0.486346 2_3:-59447136 None:intergenic
TGAAATTAAGGTAAAAGAGA+TGG 0.486682 2_3:+59446667 Msa0302640:CDS
GGAAGCTCTCTATGTATCAC+AGG 0.487037 2_3:-59446209 None:intergenic
CACAACCACCATAGCGGCCA+TGG 0.488369 2_3:-59449117 None:intergenic
GGTGGAAGTAATGGTGGCAG+TGG 0.488956 2_3:+59445360 Msa0302640:CDS
GTTCAGGCCTCACTTCAACC+TGG 0.489926 2_3:+59446856 Msa0302640:intron
GGTGTTGCCGTAGAGGAAAA+CGG 0.489984 2_3:-59445313 None:intergenic
GGTGAAACAGTATTTGAGTC+AGG 0.490823 2_3:+59445884 Msa0302640:CDS
TCTGAAGAATTTGATTCTCA+TGG 0.491097 2_3:+59445480 Msa0302640:CDS
ACGGCGACGGTGGCGGTGAG+GGG 0.492240 2_3:-59445252 None:intergenic
TTGGATAGTTTGACATCTAG+TGG 0.493950 2_3:+59445684 Msa0302640:CDS
GTTGGATACCCTCCACGTCC+AGG 0.494002 2_3:-59446731 None:intergenic
GTTTGAAGACACGGCGGCGA+CGG 0.494402 2_3:-59445230 None:intergenic
TGGATTCTGCAATGATCCCT+TGG 0.494510 2_3:-59449761 None:intergenic
TTTGTGAATGGAGCTGTAGT+TGG 0.494735 2_3:+59447570 Msa0302640:CDS
ATTCGCCTATAGACTTCTGT+AGG 0.494760 2_3:-59449435 None:intergenic
CCGCCAGTTCTTGTCCTCCA+TGG 0.495151 2_3:+59449100 Msa0302640:CDS
TACGGCAACACCACTGGTGG+TGG 0.496015 2_3:+59445324 Msa0302640:CDS
GAGAGCAGTTGATGCATTGA+GGG 0.496333 2_3:-59445200 None:intergenic
GAGGGAGTATAAGAGGAGGA+TGG 0.496741 2_3:+59445908 Msa0302640:CDS
GGAACCCTACAGAAGTCTAT+AGG 0.496842 2_3:+59449430 Msa0302640:CDS
TTCCTCTACGGCAACACCAC+TGG 0.497773 2_3:+59445318 Msa0302640:CDS
TTCTGTAAGGGGTTACAACA+TGG 0.498736 2_3:+59449186 Msa0302640:CDS
AACAGCTTACATGAAGAGTT+CGG 0.499486 2_3:-59447144 None:intergenic
TGAGAGCAGTTGATGCATTG+AGG 0.500721 2_3:-59445201 None:intergenic
GTTAAAGGCATGCATGTGTA+TGG 0.502109 2_3:+59449360 Msa0302640:CDS
TGTAACCCCTTACAGAATAA+GGG 0.504000 2_3:-59449180 None:intergenic
AAGTTTCGTTGTATTAATGT+TGG 0.504797 2_3:+59445804 Msa0302640:CDS
TGGGTATGATGAGGAAAGAA+AGG 0.507440 2_3:+59445979 Msa0302640:CDS
ATATCAGAATCCAACTCAAT+CGG 0.509396 2_3:-59445846 None:intergenic
CGATGGAACTGTTGGAATCA+CGG 0.511659 2_3:+59445746 Msa0302640:CDS
AACACCACTGGTGGTGGACA+TGG 0.516543 2_3:+59445330 Msa0302640:CDS
GATGGTGCCGCCGAAGTTGT+TGG 0.516602 2_3:-59445139 None:intergenic
TTGAAAAGGTTGATCTTGAA+GGG 0.520120 2_3:+59445712 Msa0302640:CDS
TGGAGCGAGAAATATGTTCC+AGG 0.520832 2_3:+59447590 Msa0302640:CDS
CAGAAGTACAATACCAGAGT+TGG 0.521701 2_3:-59446749 None:intergenic
TGCAAACTGCAGGTAGATCA+AGG 0.522633 2_3:+59448974 Msa0302640:intron
ACAAATGCCGATGGAACTGT+TGG 0.524279 2_3:+59445738 Msa0302640:CDS
GGTGGTGGTGGAAGTAATGG+TGG 0.524691 2_3:+59445354 Msa0302640:CDS
ACAGAAGTCTATAGGCGAAT+GGG 0.524829 2_3:+59449438 Msa0302640:CDS
CGGCTGATGTCAGTACTGAA+TGG 0.529553 2_3:+59446699 Msa0302640:CDS
CGGTGAGGGGTTTGAAGACA+CGG 0.531059 2_3:-59445239 None:intergenic
AACGGGTTTGTTAGAGTGGA+CGG 0.532988 2_3:-59445295 None:intergenic
GTAGATCAAGGCCTAGGCAT+TGG 0.533049 2_3:+59448986 Msa0302640:CDS
GGTGGCCCTTATTCTGTAAG+GGG 0.535538 2_3:+59449175 Msa0302640:CDS
GTTGTTTGTGAGGTTGTTGA+AGG 0.535781 2_3:+59446116 Msa0302640:CDS
CTCGTTCCATCCAACAACTT+CGG 0.537018 2_3:+59445129 Msa0302640:CDS
AATGCCAGTACCACCGAGGC+TGG 0.537268 2_3:-59447499 None:intergenic
GGAAGTTCAAAGGATGTCAA+AGG 0.537541 2_3:+59449408 Msa0302640:CDS
AGAGTGGACGGCAATGGCAG+CGG 0.537605 2_3:-59445283 None:intergenic
GTCTATAGGCGAATGGGTCA+AGG 0.538287 2_3:+59449444 Msa0302640:CDS
GTATAAGAGGAGGATGGAGA+AGG 0.538995 2_3:+59445914 Msa0302640:CDS
AGAGTAAAAGCATCATAACT+TGG 0.539501 2_3:-59449151 None:intergenic
TACCAAAGAGGTTGTTTGTG+AGG 0.542702 2_3:+59446106 Msa0302640:CDS
GCAGACTAAGCCGATTGAGT+TGG 0.544330 2_3:+59445836 Msa0302640:CDS
CACCAGTGGTGTTGCCGTAG+AGG 0.545329 2_3:-59445320 None:intergenic
TTGGATTAACAGCTGCGTCC+GGG 0.545816 2_3:+59446524 Msa0302640:intron
AGGGTATGCTTGTGCTTCAG+TGG 0.546401 2_3:+59446064 Msa0302640:CDS
GGAAAACGGGTTTGTTAGAG+TGG 0.546885 2_3:-59445299 None:intergenic
TGGTGCTGCCAGAAACATGC+TGG 0.547041 2_3:+59449216 Msa0302640:CDS
TACAGAAGTCTATAGGCGAA+TGG 0.548050 2_3:+59449437 Msa0302640:CDS
CCAGTACCACCGAGGCTGGT+AGG 0.550717 2_3:-59447495 None:intergenic
CTGATATGACTGAGAAGGAG+AGG 0.551839 2_3:+59445862 Msa0302640:CDS
ATCTAGTGGAATGTTTGAAA+AGG 0.552613 2_3:+59445698 Msa0302640:CDS
GTCCTCCATGGCCGCTATGG+TGG 0.553018 2_3:+59449112 Msa0302640:CDS
AGAGGAGGATGGAGAAGGCT+AGG 0.553607 2_3:+59445919 Msa0302640:CDS
GGCGGAGGAAACGGCGACGG+TGG 0.554681 2_3:-59445262 None:intergenic
GAAGTTCAAAGGATGTCAAA+GGG 0.555525 2_3:+59449409 Msa0302640:CDS
GATGGACCTCCTACCAGCCT+CGG 0.558209 2_3:+59447486 Msa0302640:CDS
CTGCAGGTAGATCAAGGCCT+AGG 0.558852 2_3:+59448980 Msa0302640:intron
ACGTGGAGGGTATCCAACTC+TGG 0.559551 2_3:+59446736 Msa0302640:CDS
TGGAAATCTTAATACCAAAG+AGG 0.562046 2_3:+59446094 Msa0302640:CDS
TTTGTTAGAGTGGACGGCAA+TGG 0.562349 2_3:-59445289 None:intergenic
GTTGATGCATTGAGGGAGAG+AGG 0.563859 2_3:-59445193 None:intergenic
TTGATGCATTGAGGGAGAGA+GGG 0.564365 2_3:-59445192 None:intergenic
GCCCTTGTGTAAACTCCGCC+CGG 0.565154 2_3:-59445645 None:intergenic
AAGCTTGGCAATGTTGTTGA+AGG 0.565864 2_3:+59446173 Msa0302640:CDS
GGAACTGGGTGCCAATGCCT+AGG 0.567234 2_3:-59448997 None:intergenic
CATGGAGGACAAGAACTGGC+GGG 0.567265 2_3:-59449099 None:intergenic
GTTTATCCAGTTGATGTCTG+TGG 0.574004 2_3:+59449054 Msa0302640:CDS
CACAAGGGCGCAACTACAGA+AGG 0.574798 2_3:+59445659 Msa0302640:CDS
TCATCAGCAATAGCTGCTGC+CGG 0.576186 2_3:-59445450 None:intergenic
TTCCGGGCGGAGTTTACACA+AGG 0.577272 2_3:+59445643 Msa0302640:CDS
AAGACACGGCGGCGACGGGA+AGG 0.577840 2_3:-59445225 None:intergenic
GGACTGAATAGAGCTCTTAG+TGG 0.577947 2_3:+59446913 Msa0302640:CDS
AGCGGCGGAGGAAACGGCGA+CGG 0.578205 2_3:-59445265 None:intergenic
CAGCAACTTCTTCAACCCTC+AGG 0.579110 2_3:+59446948 Msa0302640:CDS
GGATGGAACGAGAGAAGACA+TGG 0.579164 2_3:-59445118 None:intergenic
AGGAGAGGGAGTATAAGAGG+AGG 0.581109 2_3:+59445904 Msa0302640:CDS
TTTGAGCATCGGAATCTGCA+AGG 0.581527 2_3:+59446892 Msa0302640:CDS
ACGGTATTCGGCAAAATACA+CGG 0.581738 2_3:-59445942 None:intergenic
CGTGATTCCAACAGTTCCAT+CGG 0.582065 2_3:-59445745 None:intergenic
AACAGTATTTGAGTCAGGAG+AGG 0.582697 2_3:+59445889 Msa0302640:CDS
CGAATATTGAGGTTAATCCA+AGG 0.584035 2_3:+59446612 Msa0302640:CDS
TTGGATACCCTCCACGTCCA+GGG 0.585173 2_3:-59446730 None:intergenic
ACTGAATGGAGTATTATCCC+TGG 0.586150 2_3:+59446713 Msa0302640:CDS
CAGTTGATGTCTGTGGAGGA+AGG 0.588557 2_3:+59449061 Msa0302640:CDS
ACATAGAGAGCTTCCCAAAG+AGG 0.590094 2_3:+59446217 Msa0302640:CDS
TGGTTTGGAGGAGGAAACGG+AGG 0.591098 2_3:+59445396 Msa0302640:CDS
CTCTACGGCAACACCACTGG+TGG 0.591852 2_3:+59445321 Msa0302640:CDS
ATGTCTGTGGAGGAAGGAGC+TGG 0.592623 2_3:+59449067 Msa0302640:CDS
AAACGGCGACGGTGGCGGTG+AGG 0.592870 2_3:-59445254 None:intergenic
TTCATATAGTGAGAGTACTT+GGG 0.593668 2_3:+59445770 Msa0302640:CDS
TGGAGTATTATCCCTGGACG+TGG 0.594319 2_3:+59446719 Msa0302640:CDS
ACCCATAATCTCCAAATGAA+CGG 0.594361 2_3:-59445961 None:intergenic
GGGATCATTGCAGAATCCAC+AGG 0.594493 2_3:+59449765 Msa0302640:three_prime_UTR
GTGGACGGCAATGGCAGCGG+CGG 0.594818 2_3:-59445280 None:intergenic
GGATTCTGATATGACTGAGA+AGG 0.595424 2_3:+59445857 Msa0302640:CDS
GCGATTGAAGAATGGGAACT+GGG 0.595882 2_3:-59449011 None:intergenic
GGCCGCTATGGTGGTTGTGT+AGG 0.596201 2_3:+59449121 Msa0302640:CDS
TCTGTAAGGGGTTACAACAT+GGG 0.597256 2_3:+59449187 Msa0302640:CDS
TGGAGGACAAGAACTGGCGG+GGG 0.598639 2_3:-59449097 None:intergenic
ACCGTGTCAGAGTTAGTTGG+TGG 0.599851 2_3:-59449033 None:intergenic
GGTGGTGGAATTAGTGCAGA+TGG 0.600249 2_3:+59447468 Msa0302640:CDS
TATGGTGTCAGTTGTTCCTG+TGG 0.600323 2_3:-59449781 None:intergenic
TGGTACTGGCATTGATCACA+TGG 0.604743 2_3:+59447509 Msa0302640:CDS
TATGCACATCCATATTTGGA+TGG 0.605774 2_3:+59447103 Msa0302640:CDS
AACTCAATCGGCTTAGTCTG+CGG 0.606110 2_3:-59445834 None:intergenic
ACAGTATTTGAGTCAGGAGA+GGG 0.607068 2_3:+59445890 Msa0302640:CDS
CAAAGAGTACTACCTGGTGG+TGG 0.609512 2_3:+59447453 Msa0302640:CDS
GTGCCGCCGAAGTTGTTGGA+TGG 0.609553 2_3:-59445135 None:intergenic
TAAACCGTGTCAGAGTTAGT+TGG 0.610131 2_3:-59449036 None:intergenic
TTCGCCTATAGACTTCTGTA+GGG 0.610421 2_3:-59449434 None:intergenic
GTACCACCGAGGCTGGTAGG+AGG 0.612805 2_3:-59447492 None:intergenic
TGGAGATTATGGGTATGATG+AGG 0.614636 2_3:+59445970 Msa0302640:CDS
ATGGAGGACAAGAACTGGCG+GGG 0.616107 2_3:-59449098 None:intergenic
GTATTATCCCTGGACGTGGA+GGG 0.616682 2_3:+59446723 Msa0302640:CDS
ACCACCATGTCCACCACCAG+TGG 0.617417 2_3:-59445334 None:intergenic
ACCACTGGTGGTGGACATGG+TGG 0.617692 2_3:+59445333 Msa0302640:CDS
AAAAGAGATGGATCAGAAGA+CGG 0.620917 2_3:+59446679 Msa0302640:CDS
AGTATTATCCCTGGACGTGG+AGG 0.623139 2_3:+59446722 Msa0302640:CDS
CCATGGAGGACAAGAACTGG+CGG 0.627462 2_3:-59449100 None:intergenic
CTACTAGTCTAGTATTAGCA+CGG 0.628634 2_3:-59449642 None:intergenic
GAATGATCTAGGAAGTTCAA+AGG 0.628689 2_3:+59449398 Msa0302640:CDS
AGAAGTGGTATCATGATCAA+GGG 0.628769 2_3:+59446045 Msa0302640:CDS
TATCCAGTTGATGTCTGTGG+AGG 0.628813 2_3:+59449057 Msa0302640:CDS
AGGCCTGATGAGACTAGTGA+GGG 0.628874 2_3:+59446632 Msa0302640:CDS
GAAGGGAAGACAAATGCCGA+TGG 0.629741 2_3:+59445729 Msa0302640:CDS
TATGCCGTTGATCATAACTC+AGG 0.630071 2_3:+59449513 Msa0302640:CDS
GAAGCTCTCTATGTATCACA+GGG 0.631275 2_3:-59446208 None:intergenic
TGATATGACTGAGAAGGAGA+GGG 0.631555 2_3:+59445863 Msa0302640:CDS
TTAGGGATAAGGTTCAGAAG+TGG 0.635116 2_3:+59446030 Msa0302640:CDS
GAGATAACAACTCGTGACGA+AGG 0.635863 2_3:+59447408 Msa0302640:CDS
CAGGCCTCACTTCAACCTGG+TGG 0.639154 2_3:+59446859 Msa0302640:intron
TCAATATTAAAGGTGTTACC+CGG 0.639699 2_3:-59446542 None:intergenic
ACACCTTTAATATTGAAGCA+GGG 0.649166 2_3:+59446549 Msa0302640:CDS
ATATAGTGAGAGTACTTGGG+AGG 0.649290 2_3:+59445773 Msa0302640:CDS
AGTTCCTGAGTTATGATCAA+CGG 0.653436 2_3:-59449517 None:intergenic
TCAAAAGAAATAGTTCCACC+AGG 0.657409 2_3:-59446874 None:intergenic
AAGGCCTGATGAGACTAGTG+AGG 0.658789 2_3:+59446631 Msa0302640:CDS
CCTGATGAGACTAGTGAGGG+AGG 0.666702 2_3:+59446635 Msa0302640:CDS
ATTCAATTGAACAAACTCAG+TGG 0.672368 2_3:+59445522 Msa0302640:CDS
GTTCCATCCAACAACTTCGG+CGG 0.677116 2_3:+59445132 Msa0302640:CDS
AGTTCCACCAGGTTGAAGTG+AGG 0.678160 2_3:-59446863 None:intergenic
GCCACCAACTAACTCTGACA+CGG 0.681112 2_3:+59449032 Msa0302640:CDS
AATGGTCAAAGAGTACTACC+TGG 0.681459 2_3:+59447447 Msa0302640:CDS
TCCGGGCGGAGTTTACACAA+GGG 0.682002 2_3:+59445644 Msa0302640:CDS
CGCCTACACAACCACCATAG+CGG 0.696532 2_3:-59449123 None:intergenic
AACCACCATAGCGGCCATGG+AGG 0.698443 2_3:-59449114 None:intergenic
TCTGCACTAATTCCACCACC+AGG 0.699846 2_3:-59447465 None:intergenic
GGACCTCCTACCAGCCTCGG+TGG 0.704909 2_3:+59447489 Msa0302640:CDS
ATGATTTCTATTGTTCCGGG+CGG 0.716023 2_3:+59445630 Msa0302640:CDS
CCATAAGTGAATTTACTCTG+TGG 0.720329 2_3:-59447372 None:intergenic
GGTCAAAGAGTACTACCTGG+TGG 0.755451 2_3:+59447450 Msa0302640:CDS
TGCTGCCAGAAACATGCTGG+AGG 0.768164 2_3:+59449219 Msa0302640:CDS
GATCAATGCCAGTACCACCG+AGG 0.774073 2_3:-59447503 None:intergenic
TGAGGGGTTTGAAGACACGG+CGG 0.801528 2_3:-59445236 None:intergenic
AAGCTCTCTATGTATCACAG+GGG 0.819683 2_3:-59446207 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTAAAAAATATATTTTTAA+AGG + chr2_3:59448826-59448845 Msa0302640:intron 0.0%
!!! TTTATATAAAATCAATTTTG+TGG - chr2_3:59448799-59448818 None:intergenic 10.0%
!!! GTTTTTAAATTACATTTTTT+TGG + chr2_3:59449607-59449626 Msa0302640:three_prime_UTR 10.0%
!! ATATTATATTATACCTCTTT+GGG - chr2_3:59446233-59446252 None:intergenic 15.0%
!! AATATTATATTATACCTCTT+TGG - chr2_3:59446234-59446253 None:intergenic 15.0%
!! TTGTTATCTGTTATATATAT+GGG + chr2_3:59446284-59446303 Msa0302640:intron 15.0%
!!! AATAATTGATATTTCTAGTA+TGG + chr2_3:59446367-59446386 Msa0302640:intron 15.0%
!!! TATTTTTACATGAACTATTT+AGG + chr2_3:59447291-59447310 Msa0302640:intron 15.0%
!! TAAATTCTAACAAAAGTAAT+AGG - chr2_3:59448426-59448445 None:intergenic 15.0%
!!! TAACCAAATTAATTTTTTAG+AGG - chr2_3:59448675-59448694 None:intergenic 15.0%
!! AACATAATTGATTACTAAAA+AGG + chr2_3:59448735-59448754 Msa0302640:intron 15.0%
!!! CTAAAACAAATTTTTTAATG+TGG - chr2_3:59448852-59448871 None:intergenic 15.0%
!!! CACATTAAAAAATTTGTTTT+AGG + chr2_3:59448850-59448869 Msa0302640:intron 15.0%
!! AATTGAATAGTTATATTGAC+AGG - chr2_3:59445510-59445529 None:intergenic 20.0%
!! GTTGTTATCTGTTATATATA+TGG + chr2_3:59446283-59446302 Msa0302640:intron 20.0%
!!! TGTTTTATCAATATTGATAC+TGG + chr2_3:59447024-59447043 Msa0302640:intron 20.0%
!! CATGTAAGCAAATAATAAAA+AGG - chr2_3:59447672-59447691 None:intergenic 20.0%
!!! CTTTTTATTATTTGCTTACA+TGG + chr2_3:59447670-59447689 Msa0302640:intron 20.0%
!! AAGGCTTAAAGATAATAAAA+AGG - chr2_3:59447706-59447725 None:intergenic 20.0%
!! ATACAATTATAAGAGGAAAA+AGG - chr2_3:59447725-59447744 None:intergenic 20.0%
!!! TTTTCCTCTTATAATTGTAT+TGG + chr2_3:59447725-59447744 Msa0302640:intron 20.0%
!! TTTACCAATACAATTATAAG+AGG - chr2_3:59447732-59447751 None:intergenic 20.0%
!! ACACAATTAGAAAATATACA+AGG - chr2_3:59447858-59447877 None:intergenic 20.0%
!! TTGAAATGAAAGAACATTTA+GGG - chr2_3:59447931-59447950 None:intergenic 20.0%
!! ATTGAAATGAAAGAACATTT+AGG - chr2_3:59447932-59447951 None:intergenic 20.0%
!!! TTTTTTCACACATAATTTTG+AGG - chr2_3:59448649-59448668 None:intergenic 20.0%
!! CAAAATTATGTGTGAAAAAA+AGG + chr2_3:59448649-59448668 Msa0302640:intron 20.0%
!!! TTACATTTTTTTGGTTTAAG+TGG + chr2_3:59449616-59449635 Msa0302640:three_prime_UTR 20.0%
!!! TACATTTTTTTGGTTTAAGT+GGG + chr2_3:59449617-59449636 Msa0302640:three_prime_UTR 20.0%
! TGAAATGATTTCTATTGTTC+CGG + chr2_3:59445626-59445645 Msa0302640:CDS 25.0%
! AAGTTTCGTTGTATTAATGT+TGG + chr2_3:59445804-59445823 Msa0302640:CDS 25.0%
! TTATCTGTTATATATATGGG+AGG + chr2_3:59446287-59446306 Msa0302640:intron 25.0%
! TCTTATTGTTGTCAATTTAG+AGG + chr2_3:59446320-59446339 Msa0302640:intron 25.0%
! CTTATTGTTGTCAATTTAGA+GGG + chr2_3:59446321-59446340 Msa0302640:intron 25.0%
! AGGCAAATAATCATTGAAAT+TGG - chr2_3:59446403-59446422 None:intergenic 25.0%
!!! TTCTTTGTTTTCGAATATTG+AGG + chr2_3:59446601-59446620 Msa0302640:CDS 25.0%
! AGGCATAATTGTTGAAATTA+AGG + chr2_3:59446655-59446674 Msa0302640:CDS 25.0%
! TGAAATTAAGGTAAAAGAGA+TGG + chr2_3:59446667-59446686 Msa0302640:CDS 25.0%
!!! ATTGCTTTTCAATTTTGTTC+AGG + chr2_3:59446840-59446859 Msa0302640:intron 25.0%
! GGATATATAAGACTGAATAT+TGG - chr2_3:59447837-59447856 None:intergenic 25.0%
! AGAAAAAAATAGTCCATCAA+CGG - chr2_3:59447989-59448008 None:intergenic 25.0%
!! CAACTTTTATATTGATCCAA+AGG - chr2_3:59448101-59448120 None:intergenic 25.0%
! CTTTGGATCAATATAAAAGT+TGG + chr2_3:59448099-59448118 Msa0302640:intron 25.0%
!!! ATTTTGATCATTACAGCAAA+AGG - chr2_3:59448250-59448269 None:intergenic 25.0%
!! AGGCCTCTAAAAAATTAATT+TGG + chr2_3:59448669-59448688 Msa0302640:intron 25.0%
! GTCTTAAATAGAAAACATCA+GGG - chr2_3:59448897-59448916 None:intergenic 25.0%
! AGTCTTAAATAGAAAACATC+AGG - chr2_3:59448898-59448917 None:intergenic 25.0%
!! TTTTTATATATGCAAACTGC+AGG + chr2_3:59448964-59448983 Msa0302640:intron 25.0%
! TGATAAAGAATCATAAAACG+AGG - chr2_3:59449258-59449277 None:intergenic 25.0%
TCTGAAGAATTTGATTCTCA+TGG + chr2_3:59445480-59445499 Msa0302640:CDS 30.0%
ATTCAATTGAACAAACTCAG+TGG + chr2_3:59445522-59445541 Msa0302640:CDS 30.0%
AAGAAGCGAAAAACAAAAGT+TGG + chr2_3:59445585-59445604 Msa0302640:CDS 30.0%
GAAATGATTTCTATTGTTCC+GGG + chr2_3:59445627-59445646 Msa0302640:CDS 30.0%
ATCTAGTGGAATGTTTGAAA+AGG + chr2_3:59445698-59445717 Msa0302640:CDS 30.0%
! TTTGAAAAGGTTGATCTTGA+AGG + chr2_3:59445711-59445730 Msa0302640:CDS 30.0%
! TTGAAAAGGTTGATCTTGAA+GGG + chr2_3:59445712-59445731 Msa0302640:CDS 30.0%
!! TTTCATATAGTGAGAGTACT+TGG + chr2_3:59445769-59445788 Msa0302640:CDS 30.0%
!! TTCATATAGTGAGAGTACTT+GGG + chr2_3:59445770-59445789 Msa0302640:CDS 30.0%
ATATCAGAATCCAACTCAAT+CGG - chr2_3:59445849-59445868 None:intergenic 30.0%
TGGAAATCTTAATACCAAAG+AGG + chr2_3:59446094-59446113 Msa0302640:CDS 30.0%
TATATATATGGGAGGTTCAT+AGG + chr2_3:59446295-59446314 Msa0302640:intron 30.0%
CAATGATTATTTGCCTGTTT+AGG + chr2_3:59446407-59446426 Msa0302640:intron 30.0%
! TATTTGCCTGTTTAGGATAT+CGG + chr2_3:59446414-59446433 Msa0302640:intron 30.0%
TATATCCTAAAACTGCTCAT+TGG + chr2_3:59446471-59446490 Msa0302640:intron 30.0%
! TAAAACCAATGAGCAGTTTT+AGG - chr2_3:59446479-59446498 None:intergenic 30.0%
!! TCAATATTAAAGGTGTTACC+CGG - chr2_3:59446545-59446564 None:intergenic 30.0%
AACACCTTTAATATTGAAGC+AGG + chr2_3:59446548-59446567 Msa0302640:CDS 30.0%
ACACCTTTAATATTGAAGCA+GGG + chr2_3:59446549-59446568 Msa0302640:CDS 30.0%
!! GAACTATTTCTTTTGAGCAT+CGG + chr2_3:59446881-59446900 Msa0302640:CDS 30.0%
TTATCTACACCATCCAAATA+TGG - chr2_3:59447115-59447134 None:intergenic 30.0%
TGTCAAAGCTAATATTACAG+AGG + chr2_3:59447249-59447268 Msa0302640:intron 30.0%
ACATGAACTATTTAGGCTAA+TGG + chr2_3:59447298-59447317 Msa0302640:intron 30.0%
ATTCACTTATGGACTTGTAA+TGG + chr2_3:59447383-59447402 Msa0302640:CDS 30.0%
GGTAATCAAATTTGTGCAAA+TGG + chr2_3:59447429-59447448 Msa0302640:CDS 30.0%
! ACTTTAAAGACAGTTAGTGA+CGG - chr2_3:59447628-59447647 None:intergenic 30.0%
!! TGTCTTTAAAGTTGCATACA+TGG + chr2_3:59447636-59447655 Msa0302640:intron 30.0%
GTAGTCACATAAAACAAGAT+AGG - chr2_3:59447755-59447774 None:intergenic 30.0%
! AAAGTATCACTCAGGTTAAA+AGG - chr2_3:59447892-59447911 None:intergenic 30.0%
ATCATCCTATTTAGATCCTA+TGG + chr2_3:59447950-59447969 Msa0302640:intron 30.0%
GTTAACCATAGGATCTAAAT+AGG - chr2_3:59447958-59447977 None:intergenic 30.0%
GTAAACCTATCTACAAAGAT+AGG + chr2_3:59448125-59448144 Msa0302640:intron 30.0%
! CCTTTTCCATTATATGATGT+CGG + chr2_3:59448471-59448490 Msa0302640:intron 30.0%
! ACAAGATATCTATGTTTTCC+AGG + chr2_3:59448583-59448602 Msa0302640:intron 30.0%
! CAAGATATCTATGTTTTCCA+GGG + chr2_3:59448584-59448603 Msa0302640:intron 30.0%
AAAAAGGCTTCAATTACTCT+TGG + chr2_3:59448751-59448770 Msa0302640:intron 30.0%
!! AGAGTAAAAGCATCATAACT+TGG - chr2_3:59449154-59449173 None:intergenic 30.0%
! AGTTATGATGCTTTTACTCT+TGG + chr2_3:59449154-59449173 Msa0302640:CDS 30.0%
! GGTGCATTATATTTACGTTT+TGG + chr2_3:59449540-59449559 Msa0302640:CDS 30.0%
!!! TATATTTACGTTTTGGAGAG+AGG + chr2_3:59449547-59449566 Msa0302640:CDS 30.0%
!! GACTTGTTTTCTTTAGTACT+TGG + chr2_3:59449664-59449683 Msa0302640:three_prime_UTR 30.0%
TTCTTTAGTACTTGGAGAAT+TGG + chr2_3:59449672-59449691 Msa0302640:three_prime_UTR 30.0%
CTGATTGTCTTGATATTTGA+TGG + chr2_3:59449724-59449743 Msa0302640:three_prime_UTR 30.0%
!!! GTTTGTTGTTGATTTTGCGA+CGG - chr2_3:59445173-59445192 None:intergenic 35.0%
!!! TTGGTCTAGGTTTTTTACTC+CGG + chr2_3:59445431-59445450 Msa0302640:CDS 35.0%
TTGGATAGTTTGACATCTAG+TGG + chr2_3:59445684-59445703 Msa0302640:CDS 35.0%
ATCTCCAAATGAACGGTATT+CGG - chr2_3:59445957-59445976 None:intergenic 35.0%
TACCGTTCATTTGGAGATTA+TGG + chr2_3:59445959-59445978 Msa0302640:CDS 35.0%
ACCGTTCATTTGGAGATTAT+GGG + chr2_3:59445960-59445979 Msa0302640:CDS 35.0%
ACCCATAATCTCCAAATGAA+CGG - chr2_3:59445964-59445983 None:intergenic 35.0%
TAGGTTGTTGCAGAAGATTA+GGG + chr2_3:59446013-59446032 Msa0302640:CDS 35.0%
AGAAGTGGTATCATGATCAA+GGG + chr2_3:59446045-59446064 Msa0302640:CDS 35.0%
! TGTGCTTCAGTGGTTAATTT+TGG + chr2_3:59446074-59446093 Msa0302640:CDS 35.0%
GTTCAGTTCATTGATAAGCT+TGG + chr2_3:59446158-59446177 Msa0302640:CDS 35.0%
! ATTTGCCTGTTTAGGATATC+GGG + chr2_3:59446415-59446434 Msa0302640:intron 35.0%
!!! GGTTTTAGTTACTCACTTGA+TGG + chr2_3:59446492-59446511 Msa0302640:intron 35.0%
! CACTTGATGGATGTTTGTAT+TGG + chr2_3:59446505-59446524 Msa0302640:intron 35.0%
CTTCCCTGCTTCAATATTAA+AGG - chr2_3:59446555-59446574 None:intergenic 35.0%
CGAATATTGAGGTTAATCCA+AGG + chr2_3:59446612-59446631 Msa0302640:CDS 35.0%
AAAAGAGATGGATCAGAAGA+CGG + chr2_3:59446679-59446698 Msa0302640:CDS 35.0%
! TCAATTTTCTACAACCACCA+AGG + chr2_3:59446784-59446803 Msa0302640:intron 35.0%
! CAATTTTCTACAACCACCAA+GGG + chr2_3:59446785-59446804 Msa0302640:intron 35.0%
GGAAAAAAAAAATCCCTTGG+TGG - chr2_3:59446801-59446820 None:intergenic 35.0%
GCAGGAAAAAAAAAATCCCT+TGG - chr2_3:59446804-59446823 None:intergenic 35.0%
ATCAATCAGATTAATCGAGC+AGG - chr2_3:59446822-59446841 None:intergenic 35.0%
TCAAAAGAAATAGTTCCACC+AGG - chr2_3:59446877-59446896 None:intergenic 35.0%
! TTTCCTTCATGTTTTCTGCT+AGG + chr2_3:59447057-59447076 Msa0302640:intron 35.0%
GGATGATCTTGCATTTAAGA+TGG + chr2_3:59447078-59447097 Msa0302640:intron 35.0%
TATGCACATCCATATTTGGA+TGG + chr2_3:59447103-59447122 Msa0302640:CDS 35.0%
AACAGCTTACATGAAGAGTT+CGG - chr2_3:59447147-59447166 None:intergenic 35.0%
CCATAAGTGAATTTACTCTG+TGG - chr2_3:59447375-59447394 None:intergenic 35.0%
CCACAGAGTAAATTCACTTA+TGG + chr2_3:59447372-59447391 Msa0302640:CDS 35.0%
! GATAACACACGTTTTGTGAA+TGG + chr2_3:59447558-59447577 Msa0302640:CDS 35.0%
! TTAACATTTTCCTCCGTTGA+TGG + chr2_3:59447973-59447992 Msa0302640:intron 35.0%
AAAAAATAGTCCATCAACGG+AGG - chr2_3:59447986-59448005 None:intergenic 35.0%
ACTTGTCTAGTTGTATCCTT+TGG + chr2_3:59448082-59448101 Msa0302640:intron 35.0%
CTACTCCTATCTTTGTAGAT+AGG - chr2_3:59448133-59448152 None:intergenic 35.0%
TACAAAGATAGGAGTAGTAG+AGG + chr2_3:59448136-59448155 Msa0302640:intron 35.0%
ACAAAGATAGGAGTAGTAGA+GGG + chr2_3:59448137-59448156 Msa0302640:intron 35.0%
TAGTCTATAGTGTGCTATAG+CGG + chr2_3:59448184-59448203 Msa0302640:intron 35.0%
! CCGACATCATATAATGGAAA+AGG - chr2_3:59448474-59448493 None:intergenic 35.0%
AAGTAGCCGACATCATATAA+TGG - chr2_3:59448480-59448499 None:intergenic 35.0%
! ATTATATGATGTCGGCTACT+TGG + chr2_3:59448479-59448498 Msa0302640:intron 35.0%
AATGTGTAGTTAGAGCTCAA+TGG - chr2_3:59448516-59448535 None:intergenic 35.0%
TCAGTGAACACTTCAATTCA+TGG + chr2_3:59448537-59448556 Msa0302640:intron 35.0%
CATAGATATCTTGTCCTCAA+AGG - chr2_3:59448577-59448596 None:intergenic 35.0%
TAAATAGAAAACATCAGGGC+CGG - chr2_3:59448893-59448912 None:intergenic 35.0%
!! TAATCAGAAAGCATTGTCAC+AGG - chr2_3:59448939-59448958 None:intergenic 35.0%
! TATGATGCTTTTACTCTTGG+TGG + chr2_3:59449157-59449176 Msa0302640:CDS 35.0%
TGTAACCCCTTACAGAATAA+GGG - chr2_3:59449183-59449202 None:intergenic 35.0%
TTGTAACCCCTTACAGAATA+AGG - chr2_3:59449184-59449203 None:intergenic 35.0%
GAATGATCTAGGAAGTTCAA+AGG + chr2_3:59449398-59449417 Msa0302640:CDS 35.0%
GAAGTTCAAAGGATGTCAAA+GGG + chr2_3:59449409-59449428 Msa0302640:CDS 35.0%
AGTTCCTGAGTTATGATCAA+CGG - chr2_3:59449520-59449539 None:intergenic 35.0%
! CTACTAGTCTAGTATTAGCA+CGG - chr2_3:59449645-59449664 None:intergenic 35.0%
!!! TGGTTTTTATTTTTGCGCCA+AGG + chr2_3:59449744-59449763 Msa0302640:three_prime_UTR 35.0%
!!! GGTTTTTATTTTTGCGCCAA+GGG + chr2_3:59449745-59449764 Msa0302640:three_prime_UTR 35.0%
! AACAAACCCGTTTTCCTCTA+CGG + chr2_3:59445306-59445325 Msa0302640:CDS 40.0%
ATGATTTCTATTGTTCCGGG+CGG + chr2_3:59445630-59445649 Msa0302640:CDS 40.0%
!! ATATAGTGAGAGTACTTGGG+AGG + chr2_3:59445773-59445792 Msa0302640:CDS 40.0%
GGATTCTGATATGACTGAGA+AGG + chr2_3:59445857-59445876 Msa0302640:CDS 40.0%
TGATATGACTGAGAAGGAGA+GGG + chr2_3:59445863-59445882 Msa0302640:CDS 40.0%
GGTGAAACAGTATTTGAGTC+AGG + chr2_3:59445884-59445903 Msa0302640:CDS 40.0%
AACAGTATTTGAGTCAGGAG+AGG + chr2_3:59445889-59445908 Msa0302640:CDS 40.0%
ACAGTATTTGAGTCAGGAGA+GGG + chr2_3:59445890-59445909 Msa0302640:CDS 40.0%
ACGGTATTCGGCAAAATACA+CGG - chr2_3:59445945-59445964 None:intergenic 40.0%
TTTGCCGAATACCGTTCATT+TGG + chr2_3:59445950-59445969 Msa0302640:CDS 40.0%
TGGAGATTATGGGTATGATG+AGG + chr2_3:59445970-59445989 Msa0302640:CDS 40.0%
TGGGTATGATGAGGAAAGAA+AGG + chr2_3:59445979-59445998 Msa0302640:CDS 40.0%
AAGAAAGGAGTTTGAGTGCT+AGG + chr2_3:59445994-59446013 Msa0302640:CDS 40.0%
CTAGGTTGTTGCAGAAGATT+AGG + chr2_3:59446012-59446031 Msa0302640:CDS 40.0%
GTTGCAGAAGATTAGGGATA+AGG + chr2_3:59446019-59446038 Msa0302640:CDS 40.0%
TTAGGGATAAGGTTCAGAAG+TGG + chr2_3:59446030-59446049 Msa0302640:CDS 40.0%
CAGAAGTGGTATCATGATCA+AGG + chr2_3:59446044-59446063 Msa0302640:CDS 40.0%
TACCAAAGAGGTTGTTTGTG+AGG + chr2_3:59446106-59446125 Msa0302640:CDS 40.0%
AACCTCACAAACAACCTCTT+TGG - chr2_3:59446111-59446130 None:intergenic 40.0%
GTTGTTTGTGAGGTTGTTGA+AGG + chr2_3:59446116-59446135 Msa0302640:CDS 40.0%
AAGCTTGGCAATGTTGTTGA+AGG + chr2_3:59446173-59446192 Msa0302640:CDS 40.0%
AAGCTCTCTATGTATCACAG+GGG - chr2_3:59446210-59446229 None:intergenic 40.0%
GAAGCTCTCTATGTATCACA+GGG - chr2_3:59446211-59446230 None:intergenic 40.0%
AACAACCCGATATCCTAAAC+AGG - chr2_3:59446423-59446442 None:intergenic 40.0%
! ACTGAATGGAGTATTATCCC+TGG + chr2_3:59446713-59446732 Msa0302640:CDS 40.0%
! CAGAAGTACAATACCAGAGT+TGG - chr2_3:59446752-59446771 None:intergenic 40.0%
! GAAGAAGTTGCTGGTTGTTA+TGG - chr2_3:59446941-59446960 None:intergenic 40.0%
AATGAAGAATCTCAGCAGAC+TGG - chr2_3:59446984-59447003 None:intergenic 40.0%
CATCCTAGCAGAAAACATGA+AGG - chr2_3:59447063-59447082 None:intergenic 40.0%
GGAGTATGCACATCCATATT+TGG + chr2_3:59447099-59447118 Msa0302640:CDS 40.0%
TGAATACTGGACTCAGCTTT+CGG - chr2_3:59447177-59447196 None:intergenic 40.0%
!! AATGGTCAAAGAGTACTACC+TGG + chr2_3:59447447-59447466 Msa0302640:CDS 40.0%
TTTGTGAATGGAGCTGTAGT+TGG + chr2_3:59447570-59447589 Msa0302640:CDS 40.0%
!! GCTAGAGAAAAGTATCACTC+AGG - chr2_3:59447900-59447919 None:intergenic 40.0%
CGGAGGAAAATGTTAACCAT+AGG - chr2_3:59447969-59447988 None:intergenic 40.0%
! ATATCTATGTTTTCCAGGGC+CGG + chr2_3:59448588-59448607 Msa0302640:intron 40.0%
! TTTTAGGCCTCTTAGTCTCT+AGG + chr2_3:59448866-59448885 Msa0302640:intron 40.0%
TTTAGGCCTCTTAGTCTCTA+GGG + chr2_3:59448867-59448886 Msa0302640:intron 40.0%
TAAACCGTGTCAGAGTTAGT+TGG - chr2_3:59449039-59449058 None:intergenic 40.0%
! GTTTATCCAGTTGATGTCTG+TGG + chr2_3:59449054-59449073 Msa0302640:CDS 40.0%
TTCTGTAAGGGGTTACAACA+TGG + chr2_3:59449186-59449205 Msa0302640:CDS 40.0%
TCTGTAAGGGGTTACAACAT+GGG + chr2_3:59449187-59449206 Msa0302640:CDS 40.0%
GAGTTACGGATACCTGTTAA+AGG + chr2_3:59449345-59449364 Msa0302640:CDS 40.0%
TACACATGCATGCCTTTAAC+AGG - chr2_3:59449360-59449379 None:intergenic 40.0%
! GTTAAAGGCATGCATGTGTA+TGG + chr2_3:59449360-59449379 Msa0302640:CDS 40.0%
!! TGTATGGTTTTGCAGAGCAT+GGG + chr2_3:59449376-59449395 Msa0302640:CDS 40.0%
GGAAGTTCAAAGGATGTCAA+AGG + chr2_3:59449408-59449427 Msa0302640:CDS 40.0%
TTCGCCTATAGACTTCTGTA+GGG - chr2_3:59449437-59449456 None:intergenic 40.0%
ATTCGCCTATAGACTTCTGT+AGG - chr2_3:59449438-59449457 None:intergenic 40.0%
TACAGAAGTCTATAGGCGAA+TGG + chr2_3:59449437-59449456 Msa0302640:CDS 40.0%
ACAGAAGTCTATAGGCGAAT+GGG + chr2_3:59449438-59449457 Msa0302640:CDS 40.0%
ATGGGTCAAGGTTCATCTTA+TGG + chr2_3:59449456-59449475 Msa0302640:CDS 40.0%
CAAGGTTCATCTTATGGTGT+TGG + chr2_3:59449462-59449481 Msa0302640:CDS 40.0%
TATGCCGTTGATCATAACTC+AGG + chr2_3:59449513-59449532 Msa0302640:CDS 40.0%
GTTGATCATAACTCAGGAAC+TGG + chr2_3:59449519-59449538 Msa0302640:CDS 40.0%
CTCGTTCCATCCAACAACTT+CGG + chr2_3:59445129-59445148 Msa0302640:CDS 45.0%
TTGATGCATTGAGGGAGAGA+GGG - chr2_3:59445195-59445214 None:intergenic 45.0%
! GAGAGCAGTTGATGCATTGA+GGG - chr2_3:59445203-59445222 None:intergenic 45.0%
! TGAGAGCAGTTGATGCATTG+AGG - chr2_3:59445204-59445223 None:intergenic 45.0%
TTTGTTAGAGTGGACGGCAA+TGG - chr2_3:59445292-59445311 None:intergenic 45.0%
!! AACGGGTTTGTTAGAGTGGA+CGG - chr2_3:59445298-59445317 None:intergenic 45.0%
!! GGAAAACGGGTTTGTTAGAG+TGG - chr2_3:59445302-59445321 None:intergenic 45.0%
ACAAATGCCGATGGAACTGT+TGG + chr2_3:59445738-59445757 Msa0302640:CDS 45.0%
CGTGATTCCAACAGTTCCAT+CGG - chr2_3:59445748-59445767 None:intergenic 45.0%
CGATGGAACTGTTGGAATCA+CGG + chr2_3:59445746-59445765 Msa0302640:CDS 45.0%
! AACTCAATCGGCTTAGTCTG+CGG - chr2_3:59445837-59445856 None:intergenic 45.0%
CTGATATGACTGAGAAGGAG+AGG + chr2_3:59445862-59445881 Msa0302640:CDS 45.0%
GTATAAGAGGAGGATGGAGA+AGG + chr2_3:59445914-59445933 Msa0302640:CDS 45.0%
GGAAGCTCTCTATGTATCAC+AGG - chr2_3:59446212-59446231 None:intergenic 45.0%
ACATAGAGAGCTTCCCAAAG+AGG + chr2_3:59446217-59446236 Msa0302640:CDS 45.0%
ATTGGATTAACAGCTGCGTC+CGG + chr2_3:59446523-59446542 Msa0302640:intron 45.0%
!! TTTGAGCATCGGAATCTGCA+AGG + chr2_3:59446892-59446911 Msa0302640:CDS 45.0%
GGACTGAATAGAGCTCTTAG+TGG + chr2_3:59446913-59446932 Msa0302640:CDS 45.0%
ACATGAAGAGTTCGGTTTCG+TGG - chr2_3:59447139-59447158 None:intergenic 45.0%
AAGCTGAGTCCAGTATTCAC+TGG + chr2_3:59447178-59447197 Msa0302640:intron 45.0%
AGCTGAGTCCAGTATTCACT+GGG + chr2_3:59447179-59447198 Msa0302640:intron 45.0%
! TGGATGAAGTGCCACCAATA+TGG + chr2_3:59447212-59447231 Msa0302640:intron 45.0%
! GGATGAAGTGCCACCAATAT+GGG + chr2_3:59447213-59447232 Msa0302640:intron 45.0%
GAGATAACAACTCGTGACGA+AGG + chr2_3:59447408-59447427 Msa0302640:CDS 45.0%
!! TGGTACTGGCATTGATCACA+TGG + chr2_3:59447509-59447528 Msa0302640:CDS 45.0%
TGGAGCGAGAAATATGTTCC+AGG + chr2_3:59447590-59447609 Msa0302640:CDS 45.0%
ATAGGAGTAGTAGAGGGAAC+AGG + chr2_3:59448143-59448162 Msa0302640:intron 45.0%
GTAGTAGAGGGAACAGGTTA+AGG + chr2_3:59448149-59448168 Msa0302640:intron 45.0%
! GAAGCATTTAGCAGCCGTAA+TGG - chr2_3:59448287-59448306 None:intergenic 45.0%
TTACGGCTGCTAAATGCTTC+AGG + chr2_3:59448287-59448306 Msa0302640:intron 45.0%
TACGGCTGCTAAATGCTTCA+GGG + chr2_3:59448288-59448307 Msa0302640:intron 45.0%
TGCAAACTGCAGGTAGATCA+AGG + chr2_3:59448974-59448993 Msa0302640:intron 45.0%
GCGATTGAAGAATGGGAACT+GGG - chr2_3:59449014-59449033 None:intergenic 45.0%
!! GTTGGTGGCGATTGAAGAAT+GGG - chr2_3:59449021-59449040 None:intergenic 45.0%
!! AGTTGGTGGCGATTGAAGAA+TGG - chr2_3:59449022-59449041 None:intergenic 45.0%
! TATCCAGTTGATGTCTGTGG+AGG + chr2_3:59449057-59449076 Msa0302640:CDS 45.0%
! TTGGTGGCCCTTATTCTGTA+AGG + chr2_3:59449173-59449192 Msa0302640:CDS 45.0%
TGGTGGCCCTTATTCTGTAA+GGG + chr2_3:59449174-59449193 Msa0302640:CDS 45.0%
GGTTACAACATGGGTGAACT+TGG + chr2_3:59449196-59449215 Msa0302640:CDS 45.0%
!! GTGTATGGTTTTGCAGAGCA+TGG + chr2_3:59449375-59449394 Msa0302640:CDS 45.0%
GGAACCCTACAGAAGTCTAT+AGG + chr2_3:59449430-59449449 Msa0302640:CDS 45.0%
TGGATTCTGCAATGATCCCT+TGG - chr2_3:59449764-59449783 None:intergenic 45.0%
! TATGGTGTCAGTTGTTCCTG+TGG - chr2_3:59449784-59449803 None:intergenic 45.0%
GGATGGAACGAGAGAAGACA+TGG - chr2_3:59445121-59445140 None:intergenic 50.0%
GTTCCATCCAACAACTTCGG+CGG + chr2_3:59445132-59445151 Msa0302640:CDS 50.0%
!!! GTTGTTGATTTTGCGACGGC+CGG - chr2_3:59445169-59445188 None:intergenic 50.0%
GTTGATGCATTGAGGGAGAG+AGG - chr2_3:59445196-59445215 None:intergenic 50.0%
GTGTTGCCGTAGAGGAAAAC+GGG - chr2_3:59445315-59445334 None:intergenic 50.0%
! GGTGTTGCCGTAGAGGAAAA+CGG - chr2_3:59445316-59445335 None:intergenic 50.0%
! TGGTGGTTTGGAGGAGGAAA+CGG + chr2_3:59445393-59445412 Msa0302640:CDS 50.0%
!! GAGGAGGAGGATTTTGGTCT+AGG + chr2_3:59445418-59445437 Msa0302640:CDS 50.0%
TCATCAGCAATAGCTGCTGC+CGG - chr2_3:59445453-59445472 None:intergenic 50.0%
GGCGCAACTACAGAAGGAAT+TGG + chr2_3:59445665-59445684 Msa0302640:CDS 50.0%
GAAGGGAAGACAAATGCCGA+TGG + chr2_3:59445729-59445748 Msa0302640:CDS 50.0%
GCAGACTAAGCCGATTGAGT+TGG + chr2_3:59445836-59445855 Msa0302640:CDS 50.0%
! GTCAGGAGAGGGAGTATAAG+AGG + chr2_3:59445901-59445920 Msa0302640:CDS 50.0%
! AGGAGAGGGAGTATAAGAGG+AGG + chr2_3:59445904-59445923 Msa0302640:CDS 50.0%
! GAGGGAGTATAAGAGGAGGA+TGG + chr2_3:59445908-59445927 Msa0302640:CDS 50.0%
AGGGTATGCTTGTGCTTCAG+TGG + chr2_3:59446064-59446083 Msa0302640:CDS 50.0%
TTGGATTAACAGCTGCGTCC+GGG + chr2_3:59446524-59446543 Msa0302640:intron 50.0%
! TCACTAGTCTCATCAGGCCT+TGG - chr2_3:59446632-59446651 None:intergenic 50.0%
AAGGCCTGATGAGACTAGTG+AGG + chr2_3:59446631-59446650 Msa0302640:CDS 50.0%
AGGCCTGATGAGACTAGTGA+GGG + chr2_3:59446632-59446651 Msa0302640:CDS 50.0%
! CGGCTGATGTCAGTACTGAA+TGG + chr2_3:59446699-59446718 Msa0302640:CDS 50.0%
! TGGAGTATTATCCCTGGACG+TGG + chr2_3:59446719-59446738 Msa0302640:CDS 50.0%
AGTATTATCCCTGGACGTGG+AGG + chr2_3:59446722-59446741 Msa0302640:CDS 50.0%
GTATTATCCCTGGACGTGGA+GGG + chr2_3:59446723-59446742 Msa0302640:CDS 50.0%
! AGTTCCACCAGGTTGAAGTG+AGG - chr2_3:59446866-59446885 None:intergenic 50.0%
CTGAGGGTTGAAGAAGTTGC+TGG - chr2_3:59446950-59446969 None:intergenic 50.0%
CAGCAACTTCTTCAACCCTC+AGG + chr2_3:59446948-59446967 Msa0302640:CDS 50.0%
!! ACTGGCTCAAGAGTACCTGA+GGG - chr2_3:59446966-59446985 None:intergenic 50.0%
GCTGAGTCCAGTATTCACTG+GGG + chr2_3:59447180-59447199 Msa0302640:intron 50.0%
CTGAGTCCAGTATTCACTGG+GGG + chr2_3:59447181-59447200 Msa0302640:intron 50.0%
!! CCACCAATATGGGTTGATCG+CGG + chr2_3:59447223-59447242 Msa0302640:intron 50.0%
CTGTGGCGTGAAATTCTGCT+TGG - chr2_3:59447358-59447377 None:intergenic 50.0%
!! GGTCAAAGAGTACTACCTGG+TGG + chr2_3:59447450-59447469 Msa0302640:CDS 50.0%
!! CAAAGAGTACTACCTGGTGG+TGG + chr2_3:59447453-59447472 Msa0302640:CDS 50.0%
TCTGCACTAATTCCACCACC+AGG - chr2_3:59447468-59447487 None:intergenic 50.0%
!! GGTGGTGGAATTAGTGCAGA+TGG + chr2_3:59447468-59447487 Msa0302640:CDS 50.0%
! TGACGGATGAGATAGTCACC+TGG - chr2_3:59447611-59447630 None:intergenic 50.0%
CGCAGCTATTCGCACCATTA+CGG + chr2_3:59448270-59448289 Msa0302640:intron 50.0%
ACGGCTGCTAAATGCTTCAG+GGG + chr2_3:59448289-59448308 Msa0302640:intron 50.0%
TCCAACTTGCGCTACCTTTG+AGG + chr2_3:59448560-59448579 Msa0302640:intron 50.0%
TCCTCAAAGGTAGCGCAAGT+TGG - chr2_3:59448564-59448583 None:intergenic 50.0%
GTAGATCAAGGCCTAGGCAT+TGG + chr2_3:59448986-59449005 Msa0302640:CDS 50.0%
GGCGATTGAAGAATGGGAAC+TGG - chr2_3:59449015-59449034 None:intergenic 50.0%
GCCACCAACTAACTCTGACA+CGG + chr2_3:59449032-59449051 Msa0302640:CDS 50.0%
ACCGTGTCAGAGTTAGTTGG+TGG - chr2_3:59449036-59449055 None:intergenic 50.0%
CTTCCTCCACAGACATCAAC+TGG - chr2_3:59449063-59449082 None:intergenic 50.0%
! CAGTTGATGTCTGTGGAGGA+AGG + chr2_3:59449061-59449080 Msa0302640:CDS 50.0%
GGTGGCCCTTATTCTGTAAG+GGG + chr2_3:59449175-59449194 Msa0302640:CDS 50.0%
TCCTACCTCCAGCATGTTTC+TGG - chr2_3:59449227-59449246 None:intergenic 50.0%
CACAGCTTGCAGCTGAGTTA+CGG + chr2_3:59449331-59449350 Msa0302640:intron 50.0%
GCAGAGCATGGGAATGATCT+AGG + chr2_3:59449387-59449406 Msa0302640:CDS 50.0%
GTCTATAGGCGAATGGGTCA+AGG + chr2_3:59449444-59449463 Msa0302640:CDS 50.0%
!! TATGGTGTTGGTGCCAAGCT+TGG + chr2_3:59449474-59449493 Msa0302640:CDS 50.0%
!! TGTTGGTGCCAAGCTTGGTT+TGG + chr2_3:59449479-59449498 Msa0302640:CDS 50.0%
TGCTCTGACCAAACCAAGCT+TGG - chr2_3:59449490-59449509 None:intergenic 50.0%
GGGATCATTGCAGAATCCAC+AGG + chr2_3:59449765-59449784 Msa0302640:three_prime_UTR 50.0%
TTCGGCGGCACCATCTTATC+CGG + chr2_3:59445147-59445166 Msa0302640:CDS 55.0%
TTTGCGACGGCCGGATAAGA+TGG - chr2_3:59445160-59445179 None:intergenic 55.0%
TGAGGGGTTTGAAGACACGG+CGG - chr2_3:59445239-59445258 None:intergenic 55.0%
CGGTGAGGGGTTTGAAGACA+CGG - chr2_3:59445242-59445261 None:intergenic 55.0%
TTCCTCTACGGCAACACCAC+TGG + chr2_3:59445318-59445337 Msa0302640:CDS 55.0%
!! AACACCACTGGTGGTGGACA+TGG + chr2_3:59445330-59445349 Msa0302640:CDS 55.0%
!! GGTGGTGGTGGTGGAAGTAA+TGG + chr2_3:59445351-59445370 Msa0302640:CDS 55.0%
!! GGTGGTGGTGGAAGTAATGG+TGG + chr2_3:59445354-59445373 Msa0302640:CDS 55.0%
GGTGGAAGTAATGGTGGCAG+TGG + chr2_3:59445360-59445379 Msa0302640:CDS 55.0%
GGAAGTAATGGTGGCAGTGG+TGG + chr2_3:59445363-59445382 Msa0302640:CDS 55.0%
AGTAATGGTGGCAGTGGTGG+TGG + chr2_3:59445366-59445385 Msa0302640:CDS 55.0%
! TGGTTTGGAGGAGGAAACGG+AGG + chr2_3:59445396-59445415 Msa0302640:CDS 55.0%
TTTGGAGGAGGAAACGGAGG+AGG + chr2_3:59445399-59445418 Msa0302640:CDS 55.0%
! ACGGAGGAGGAGGAGGATTT+TGG + chr2_3:59445412-59445431 Msa0302640:CDS 55.0%
TTCCGGGCGGAGTTTACACA+AGG + chr2_3:59445643-59445662 Msa0302640:CDS 55.0%
TCCGGGCGGAGTTTACACAA+GGG + chr2_3:59445644-59445663 Msa0302640:CDS 55.0%
! CACAAGGGCGCAACTACAGA+AGG + chr2_3:59445659-59445678 Msa0302640:CDS 55.0%
AGAGGAGGATGGAGAAGGCT+AGG + chr2_3:59445919-59445938 Msa0302640:CDS 55.0%
! CCTCCCTCACTAGTCTCATC+AGG - chr2_3:59446638-59446657 None:intergenic 55.0%
CCTGATGAGACTAGTGAGGG+AGG + chr2_3:59446635-59446654 Msa0302640:CDS 55.0%
TTGGATACCCTCCACGTCCA+GGG - chr2_3:59446733-59446752 None:intergenic 55.0%
!! ACGTGGAGGGTATCCAACTC+TGG + chr2_3:59446736-59446755 Msa0302640:CDS 55.0%
GTTCAGGCCTCACTTCAACC+TGG + chr2_3:59446856-59446875 Msa0302640:intron 55.0%
!! GACTGGCTCAAGAGTACCTG+AGG - chr2_3:59446967-59446986 None:intergenic 55.0%
CCGCGATCAACCCATATTGG+TGG - chr2_3:59447226-59447245 None:intergenic 55.0%
CCACCGCGATCAACCCATAT+TGG - chr2_3:59447229-59447248 None:intergenic 55.0%
!! CCAATATGGGTTGATCGCGG+TGG + chr2_3:59447226-59447245 Msa0302640:intron 55.0%
GATCAATGCCAGTACCACCG+AGG - chr2_3:59447506-59447525 None:intergenic 55.0%
CGGCTGCTAAATGCTTCAGG+GGG + chr2_3:59448290-59448309 Msa0302640:intron 55.0%
! AAGCCCTTGCTTGGGTTGCT+TGG - chr2_3:59448622-59448641 None:intergenic 55.0%
GCAACCCAAGCAAGGGCTTT+AGG + chr2_3:59448623-59448642 Msa0302640:intron 55.0%
GAGGCCTAAAGCCCTTGCTT+GGG - chr2_3:59448630-59448649 None:intergenic 55.0%
TGAGGCCTAAAGCCCTTGCT+TGG - chr2_3:59448631-59448650 None:intergenic 55.0%
CTGCAGGTAGATCAAGGCCT+AGG + chr2_3:59448980-59448999 Msa0302640:intron 55.0%
ATGTCTGTGGAGGAAGGAGC+TGG + chr2_3:59449067-59449086 Msa0302640:CDS 55.0%
ATGGAGGACAAGAACTGGCG+GGG - chr2_3:59449101-59449120 None:intergenic 55.0%
CATGGAGGACAAGAACTGGC+GGG - chr2_3:59449102-59449121 None:intergenic 55.0%
CCATGGAGGACAAGAACTGG+CGG - chr2_3:59449103-59449122 None:intergenic 55.0%
CGCCTACACAACCACCATAG+CGG - chr2_3:59449126-59449145 None:intergenic 55.0%
!! TGGTGCTGCCAGAAACATGC+TGG + chr2_3:59449216-59449235 Msa0302640:CDS 55.0%
TGCTGCCAGAAACATGCTGG+AGG + chr2_3:59449219-59449238 Msa0302640:CDS 55.0%
GCCAGAAACATGCTGGAGGT+AGG + chr2_3:59449223-59449242 Msa0302640:intron 55.0%
CGTAACTCAGCTGCAAGCTG+TGG - chr2_3:59449333-59449352 None:intergenic 55.0%
GTGCCGCCGAAGTTGTTGGA+TGG - chr2_3:59445138-59445157 None:intergenic 60.0%
!! GATGGTGCCGCCGAAGTTGT+TGG - chr2_3:59445142-59445161 None:intergenic 60.0%
TTTGAAGACACGGCGGCGAC+GGG - chr2_3:59445232-59445251 None:intergenic 60.0%
GTTTGAAGACACGGCGGCGA+CGG - chr2_3:59445233-59445252 None:intergenic 60.0%
AATGGCAGCGGCGGAGGAAA+CGG - chr2_3:59445274-59445293 None:intergenic 60.0%
AGAGTGGACGGCAATGGCAG+CGG - chr2_3:59445286-59445305 None:intergenic 60.0%
!! CACCAGTGGTGTTGCCGTAG+AGG - chr2_3:59445323-59445342 None:intergenic 60.0%
CTCTACGGCAACACCACTGG+TGG + chr2_3:59445321-59445340 Msa0302640:CDS 60.0%
TACGGCAACACCACTGGTGG+TGG + chr2_3:59445324-59445343 Msa0302640:CDS 60.0%
!! ACCACTGGTGGTGGACATGG+TGG + chr2_3:59445333-59445352 Msa0302640:CDS 60.0%
ACCACCATGTCCACCACCAG+TGG - chr2_3:59445337-59445356 None:intergenic 60.0%
!! ACTGGTGGTGGACATGGTGG+TGG + chr2_3:59445336-59445355 Msa0302640:CDS 60.0%
!! AATGGTGGCAGTGGTGGTGG+TGG + chr2_3:59445369-59445388 Msa0302640:CDS 60.0%
!! GGTGGTGGTGGTTGGTGGTT+TGG + chr2_3:59445381-59445400 Msa0302640:CDS 60.0%
!! GGTGGTGGTTGGTGGTTTGG+AGG + chr2_3:59445384-59445403 Msa0302640:CDS 60.0%
!! GGTGGTTGGTGGTTTGGAGG+AGG + chr2_3:59445387-59445406 Msa0302640:CDS 60.0%
GCCCTTGTGTAAACTCCGCC+CGG - chr2_3:59445648-59445667 None:intergenic 60.0%
GTTGGATACCCTCCACGTCC+AGG - chr2_3:59446734-59446753 None:intergenic 60.0%
CAGGCCTCACTTCAACCTGG+TGG + chr2_3:59446859-59446878 Msa0302640:intron 60.0%
TGGTGGCACTTCATCCAGCC+CGG - chr2_3:59447209-59447228 None:intergenic 60.0%
GATGGACCTCCTACCAGCCT+CGG + chr2_3:59447486-59447505 Msa0302640:CDS 60.0%
AATGCCAGTACCACCGAGGC+TGG - chr2_3:59447502-59447521 None:intergenic 60.0%
! GCGGCGTGTAGAGTGTTCAG+TGG + chr2_3:59448203-59448222 Msa0302640:intron 60.0%
! TGTTTTCCAGGGCCGGCCTA+AGG + chr2_3:59448595-59448614 Msa0302640:intron 60.0%
! GTTTTCCAGGGCCGGCCTAA+GGG + chr2_3:59448596-59448615 Msa0302640:intron 60.0%
! GCTTGGGTTGCTTGGCCCTT+AGG - chr2_3:59448614-59448633 None:intergenic 60.0%
AGGGCCAAGCAACCCAAGCA+AGG + chr2_3:59448615-59448634 Msa0302640:intron 60.0%
GGGCCAAGCAACCCAAGCAA+GGG + chr2_3:59448616-59448635 Msa0302640:intron 60.0%
!! GGCCTCTTAGTCTCTAGGGC+CGG + chr2_3:59448871-59448890 Msa0302640:intron 60.0%
GGAACTGGGTGCCAATGCCT+AGG - chr2_3:59449000-59449019 None:intergenic 60.0%
TGGAGGACAAGAACTGGCGG+GGG - chr2_3:59449100-59449119 None:intergenic 60.0%
CCGCCAGTTCTTGTCCTCCA+TGG + chr2_3:59449100-59449119 Msa0302640:CDS 60.0%
CGGCCATGGAGGACAAGAAC+TGG - chr2_3:59449106-59449125 None:intergenic 60.0%
CTTGTCCTCCATGGCCGCTA+TGG + chr2_3:59449109-59449128 Msa0302640:CDS 60.0%
AACCACCATAGCGGCCATGG+AGG - chr2_3:59449117-59449136 None:intergenic 60.0%
CACAACCACCATAGCGGCCA+TGG - chr2_3:59449120-59449139 None:intergenic 60.0%
GGCCGCTATGGTGGTTGTGT+AGG + chr2_3:59449121-59449140 Msa0302640:CDS 60.0%
!! GGTGGTGGACATGGTGGTGG+TGG + chr2_3:59445339-59445358 Msa0302640:CDS 65.0%
!! GGTGGACATGGTGGTGGTGG+TGG + chr2_3:59445342-59445361 Msa0302640:CDS 65.0%
!! GTGGCAGTGGTGGTGGTGGT+TGG + chr2_3:59445373-59445392 Msa0302640:CDS 65.0%
!! GCAGTGGTGGTGGTGGTTGG+TGG + chr2_3:59445376-59445395 Msa0302640:CDS 65.0%
GGAGGAGGAAACGGAGGAGG+AGG + chr2_3:59445402-59445421 Msa0302640:CDS 65.0%
GGAGGAAACGGAGGAGGAGG+AGG + chr2_3:59445405-59445424 Msa0302640:CDS 65.0%
CCAGTATTCACTGGGGGCCC+CGG + chr2_3:59447187-59447206 Msa0302640:intron 65.0%
CAGTATTCACTGGGGGCCCC+GGG + chr2_3:59447188-59447207 Msa0302640:intron 65.0%
GTGGCACTTCATCCAGCCCG+GGG - chr2_3:59447207-59447226 None:intergenic 65.0%
GGTGGCACTTCATCCAGCCC+GGG - chr2_3:59447208-59447227 None:intergenic 65.0%
GTACCACCGAGGCTGGTAGG+AGG - chr2_3:59447495-59447514 None:intergenic 65.0%
CCAGTACCACCGAGGCTGGT+AGG - chr2_3:59447498-59447517 None:intergenic 65.0%
CCTACCAGCCTCGGTGGTAC+TGG + chr2_3:59447495-59447514 Msa0302640:CDS 65.0%
GGGTTGCTTGGCCCTTAGGC+CGG - chr2_3:59448610-59448629 None:intergenic 65.0%
GGCCGGCCCTAGAGACTAAG+AGG - chr2_3:59448876-59448895 None:intergenic 65.0%
AGGACAAGAACTGGCGGGGG+TGG - chr2_3:59449097-59449116 None:intergenic 65.0%
GTCCTCCATGGCCGCTATGG+TGG + chr2_3:59449112-59449131 Msa0302640:CDS 65.0%
AAGACACGGCGGCGACGGGA+AGG - chr2_3:59445228-59445247 None:intergenic 70.0%
! AACGGCGACGGTGGCGGTGA+GGG - chr2_3:59445256-59445275 None:intergenic 70.0%
! AAACGGCGACGGTGGCGGTG+AGG - chr2_3:59445257-59445276 None:intergenic 70.0%
GGAGGAAACGGCGACGGTGG+CGG - chr2_3:59445262-59445281 None:intergenic 70.0%
AGCGGCGGAGGAAACGGCGA+CGG - chr2_3:59445268-59445287 None:intergenic 70.0%
GTGGACGGCAATGGCAGCGG+CGG - chr2_3:59445283-59445302 None:intergenic 70.0%
CCGGGGCCCCCAGTGAATAC+TGG - chr2_3:59447190-59447209 None:intergenic 70.0%
GGACCTCCTACCAGCCTCGG+TGG + chr2_3:59447489-59447508 Msa0302640:CDS 70.0%
! ACGGCGACGGTGGCGGTGAG+GGG - chr2_3:59445255-59445274 None:intergenic 75.0%
GGCGGAGGAAACGGCGACGG+TGG - chr2_3:59445265-59445284 None:intergenic 75.0%
GACGGCAATGGCAGCGGCGG+AGG - chr2_3:59445280-59445299 None:intergenic 75.0%
ATTCACTGGGGGCCCCGGGC+TGG + chr2_3:59447192-59447211 Msa0302640:intron 75.0%
CTTGGCCCTTAGGCCGGCCC+TGG - chr2_3:59448604-59448623 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr2_3 gene 59445079 59449814 59445079 ID=Msa0302640;Name=Msa0302640
chr2_3 mRNA 59445079 59449814 59445079 ID=Msa0302640-mRNA-1;Parent=Msa0302640;Name=Msa0302640-mRNA-1;_AED=0.06;_eAED=0.06;_QI=41|0.83|0.71|1|1|1|7|239|756
chr2_3 exon 59445079 59446238 59445079 ID=Msa0302640-mRNA-1:exon:19272;Parent=Msa0302640-mRNA-1
chr2_3 exon 59446536 59446757 59446536 ID=Msa0302640-mRNA-1:exon:19273;Parent=Msa0302640-mRNA-1
chr2_3 exon 59446862 59446969 59446862 ID=Msa0302640-mRNA-1:exon:19274;Parent=Msa0302640-mRNA-1
chr2_3 exon 59447079 59447156 59447079 ID=Msa0302640-mRNA-1:exon:19275;Parent=Msa0302640-mRNA-1
chr2_3 exon 59447363 59447611 59447363 ID=Msa0302640-mRNA-1:exon:19276;Parent=Msa0302640-mRNA-1
chr2_3 exon 59448986 59449240 59448986 ID=Msa0302640-mRNA-1:exon:19277;Parent=Msa0302640-mRNA-1
chr2_3 exon 59449336 59449814 59449336 ID=Msa0302640-mRNA-1:exon:19278;Parent=Msa0302640-mRNA-1
chr2_3 five_prime_UTR 59445079 59445119 59445079 ID=Msa0302640-mRNA-1:five_prime_utr;Parent=Msa0302640-mRNA-1
chr2_3 CDS 59445120 59446238 59445120 ID=Msa0302640-mRNA-1:cds;Parent=Msa0302640-mRNA-1
chr2_3 CDS 59446536 59446757 59446536 ID=Msa0302640-mRNA-1:cds;Parent=Msa0302640-mRNA-1
chr2_3 CDS 59446862 59446969 59446862 ID=Msa0302640-mRNA-1:cds;Parent=Msa0302640-mRNA-1
chr2_3 CDS 59447079 59447156 59447079 ID=Msa0302640-mRNA-1:cds;Parent=Msa0302640-mRNA-1
chr2_3 CDS 59447363 59447611 59447363 ID=Msa0302640-mRNA-1:cds;Parent=Msa0302640-mRNA-1
chr2_3 CDS 59448986 59449240 59448986 ID=Msa0302640-mRNA-1:cds;Parent=Msa0302640-mRNA-1
chr2_3 CDS 59449336 59449575 59449336 ID=Msa0302640-mRNA-1:cds;Parent=Msa0302640-mRNA-1
chr2_3 three_prime_UTR 59449576 59449814 59449576 ID=Msa0302640-mRNA-1:three_prime_utr;Parent=Msa0302640-mRNA-1
Gene Sequence

>Msa0302640

ATGTCTTCTCTCGTTCCATCCAACAACTTCGGCGGCACCATCTTATCCGGCCGTCGCAAAATCAACAACAAACCCTCTCTCCCTCAATGCATCAACTGCTCTCAACCTTCCCGTCGCCGCCGTGTCTTCAAACCCCTCACCGCCACCGTCGCCGTTTCCTCCGCCGCTGCCATTGCCGTCCACTCTAACAAACCCGTTTTCCTCTACGGCAACACCACTGGTGGTGGACATGGTGGTGGTGGTGGAAGTAATGGTGGCAGTGGTGGTGGTGGTTGGTGGTTTGGAGGAGGAAACGGAGGAGGAGGAGGATTTTGGTCTAGGTTTTTTACTCCGGCAGCAGCTATTGCTGATGAAACTAAATCTGAAGAATTTGATTCTCATGGTATGCCTGTCAATATAACTATTCAATTGAACAAACTCAGTGGTTTTAAGAAATACAAGATTTCTGAGATTACGTTTTTCGATAAGAAGCGAAAAACAAAAGTTGGTTCTGATGATTCTTTTAGTGAAATGATTTCTATTGTTCCGGGCGGAGTTTACACAAGGGCGCAACTACAGAAGGAATTGGATAGTTTGACATCTAGTGGAATGTTTGAAAAGGTTGATCTTGAAGGGAAGACAAATGCCGATGGAACTGTTGGAATCACGGTTTCATATAGTGAGAGTACTTGGGAGGCTGCTGAGAAGTTTCGTTGTATTAATGTTGGTATGATGCCGCAGACTAAGCCGATTGAGTTGGATTCTGATATGACTGAGAAGGAGAGGGTGAAACAGTATTTGAGTCAGGAGAGGGAGTATAAGAGGAGGATGGAGAAGGCTAGGCCGTGTATTTTGCCGAATACCGTTCATTTGGAGATTATGGGTATGATGAGGAAAGAAAGGAGTTTGAGTGCTAGGTTGTTGCAGAAGATTAGGGATAAGGTTCAGAAGTGGTATCATGATCAAGGGTATGCTTGTGCTTCAGTGGTTAATTTTGGAAATCTTAATACCAAAGAGGTTGTTTGTGAGGTTGTTGAAGGTGATATCAGTCAATTGCAAGTTCAGTTCATTGATAAGCTTGGCAATGTTGTTGAAGGCAATACTCAAGCCCCTGTGATACATAGAGAGCTTCCCAAAGAGCTGCGTCCGGGTAACACCTTTAATATTGAAGCAGGGAAGCAAGCTTTAAGAAACATAAATTCTCTTTCTTTGTTTTCGAATATTGAGGTTAATCCAAGGCCTGATGAGACTAGTGAGGGAGGCATAATTGTTGAAATTAAGGTAAAAGAGATGGATCAGAAGACGGCTGATGTCAGTACTGAATGGAGTATTATCCCTGGACGTGGAGGGTATCCAACTCTGGCCTCACTTCAACCTGGTGGAACTATTTCTTTTGAGCATCGGAATCTGCAAGGACTGAATAGAGCTCTTAGTGGTTCCATAACAACCAGCAACTTCTTCAACCCTCAGGATGATCTTGCATTTAAGATGGAGTATGCACATCCATATTTGGATGGTGTAGATAATCCACGAAACCGAACTCTTCATAATTTCACGCCACAGAGTAAATTCACTTATGGACTTGTAATGGAAGAGATAACAACTCGTGACGAAGGTAATCAAATTTGTGCAAATGGTCAAAGAGTACTACCTGGTGGTGGAATTAGTGCAGATGGACCTCCTACCAGCCTCGGTGGTACTGGCATTGATCACATGGCATTTTTACAAGCGAATATCATTCGTGATAACACACGTTTTGTGAATGGAGCTGTAGTTGGAGCGAGAAATATGTTCCAGGTAGATCAAGGCCTAGGCATTGGCACCCAGTTCCCATTCTTCAATCGCCACCAACTAACTCTGACACGGTTTATCCAGTTGATGTCTGTGGAGGAAGGAGCTGGTAAACCACCCCCGCCAGTTCTTGTCCTCCATGGCCGCTATGGTGGTTGTGTAGGCGATCTTCCAAGTTATGATGCTTTTACTCTTGGTGGCCCTTATTCTGTAAGGGGTTACAACATGGGTGAACTTGGTGCTGCCAGAAACATGCTGGAGCTTGCAGCTGAGTTACGGATACCTGTTAAAGGCATGCATGTGTATGGTTTTGCAGAGCATGGGAATGATCTAGGAAGTTCAAAGGATGTCAAAGGGAACCCTACAGAAGTCTATAGGCGAATGGGTCAAGGTTCATCTTATGGTGTTGGTGCCAAGCTTGGTTTGGTCAGAGCAGAATATGCCGTTGATCATAACTCAGGAACTGGTGCATTATATTTACGTTTTGGAGAGAGGTTTTAA
Protein sequence

>Msa0302640

MSSLVPSNNFGGTILSGRRKINNKPSLPQCINCSQPSRRRRVFKPLTATVAVSSAAAIAVHSNKPVFLYGNTTGGGHGGGGGSNGGSGGGGWWFGGGNGGGGGFWSRFFTPAAAIADETKSEEFDSHGMPVNITIQLNKLSGFKKYKISEITFFDKKRKTKVGSDDSFSEMISIVPGGVYTRAQLQKELDSLTSSGMFEKVDLEGKTNADGTVGITVSYSESTWEAAEKFRCINVGMMPQTKPIELDSDMTEKERVKQYLSQEREYKRRMEKARPCILPNTVHLEIMGMMRKERSLSARLLQKIRDKVQKWYHDQGYACASVVNFGNLNTKEVVCEVVEGDISQLQVQFIDKLGNVVEGNTQAPVIHRELPKELRPGNTFNIEAGKQALRNINSLSLFSNIEVNPRPDETSEGGIIVEIKVKEMDQKTADVSTEWSIIPGRGGYPTLASLQPGGTISFEHRNLQGLNRALSGSITTSNFFNPQDDLAFKMEYAHPYLDGVDNPRNRTLHNFTPQSKFTYGLVMEEITTRDEGNQICANGQRVLPGGGISADGPPTSLGGTGIDHMAFLQANIIRDNTRFVNGAVVGARNMFQVDQGLGIGTQFPFFNRHQLTLTRFIQLMSVEEGAGKPPPPVLVLHGRYGGCVGDLPSYDAFTLGGPYSVRGYNMGELGAARNMLELAAELRIPVKGMHVYGFAEHGNDLGSSKDVKGNPTEVYRRMGQGSSYGVGAKLGLVRAEYAVDHNSGTGALYLRFGERF*