Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0836870 | XP_003611819.1 | 91.029 | 836 | 75 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1562 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0836870 | sp|Q9FKZ1|DRL42_ARATH | 36.686 | 845 | 474 | 19 | 5 | 832 | 7 | 807 | 6.18e-149 | 461 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0836870 | G7K9D4 | 91.029 | 836 | 75 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1562 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0092410 | Msa0836870 | 0.831153 | 1.961439e-55 | -8.615850e-47 |
Msa0836870 | Msa0898320 | 0.819757 | 9.820818e-53 | -8.615850e-47 |
Msa0836870 | Msa0899970 | 0.801701 | 7.951514e-49 | -8.615850e-47 |
Msa0836870 | Msa0902830 | 0.813305 | 2.738355e-51 | -8.615850e-47 |
Msa0836870 | Msa1043120 | 0.820817 | 5.611897e-53 | -8.615850e-47 |
Msa0836870 | Msa1430550 | 0.809207 | 2.120968e-50 | -8.615850e-47 |
Msa0836870 | Msa1462360 | 0.815795 | 7.699809e-52 | -8.615850e-47 |
Msa0371950 | Msa0836870 | 0.805911 | 1.062130e-49 | -8.615850e-47 |
Msa0408340 | Msa0836870 | 0.811717 | 6.087525e-51 | -8.615850e-47 |
Msa0240270 | Msa0836870 | 0.812504 | 4.100184e-51 | -8.615850e-47 |
Msa0244190 | Msa0836870 | 0.801237 | 9.900201e-49 | -8.615850e-47 |
Msa0269560 | Msa0836870 | 0.822157 | 2.752116e-53 | -8.615850e-47 |
Msa0271550 | Msa0836870 | 0.810022 | 1.417290e-50 | -8.615850e-47 |
Msa0277410 | Msa0836870 | 0.803722 | 3.043116e-49 | -8.615850e-47 |
Msa0282720 | Msa0836870 | 0.801405 | 9.147209e-49 | -8.615850e-47 |
Msa0319290 | Msa0836870 | 0.802533 | 5.362974e-49 | -8.615850e-47 |
Msa0348550 | Msa0836870 | 0.802973 | 4.351584e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0836870 | MtrunA17_Chr5g0402771 | 91.029 | 836 | 75 | 0 | 1 | 836 | 1 | 836 | 0.0 | 1562 |
Msa0836870 | MtrunA17_Chr5g0402671 | 81.473 | 842 | 137 | 4 | 1 | 836 | 1 | 829 | 0.0 | 1373 |
Msa0836870 | MtrunA17_Chr5g0402721 | 74.851 | 839 | 174 | 8 | 1 | 836 | 1 | 805 | 0.0 | 1233 |
Msa0836870 | MtrunA17_Chr5g0402681 | 73.182 | 839 | 199 | 9 | 1 | 836 | 1 | 816 | 0.0 | 1203 |
Msa0836870 | MtrunA17_Chr8g0374351 | 54.755 | 694 | 295 | 10 | 149 | 836 | 78 | 758 | 0.0 | 704 |
Msa0836870 | MtrunA17_Chr8g0374541 | 48.109 | 846 | 396 | 16 | 1 | 832 | 1 | 817 | 0.0 | 702 |
Msa0836870 | MtrunA17_Chr8g0374531 | 53.226 | 682 | 300 | 9 | 155 | 831 | 139 | 806 | 0.0 | 686 |
Msa0836870 | MtrunA17_Chr8g0374461 | 53.771 | 716 | 312 | 10 | 126 | 836 | 72 | 773 | 0.0 | 685 |
Msa0836870 | MtrunA17_Chr8g0374511 | 53.173 | 709 | 309 | 11 | 131 | 831 | 87 | 780 | 0.0 | 678 |
Msa0836870 | MtrunA17_Chr8g0374471 | 48.117 | 823 | 388 | 11 | 14 | 831 | 16 | 804 | 0.0 | 676 |
Msa0836870 | MtrunA17_Chr8g0374561 | 43.847 | 837 | 418 | 16 | 1 | 824 | 1 | 798 | 0.0 | 645 |
Msa0836870 | MtrunA17_Chr8g0374551 | 42.482 | 838 | 422 | 18 | 1 | 824 | 1 | 792 | 0.0 | 628 |
Msa0836870 | MtrunA17_Chr8g0374291 | 44.840 | 843 | 412 | 18 | 8 | 833 | 7 | 813 | 0.0 | 620 |
Msa0836870 | MtrunA17_Chr8g0374301 | 42.506 | 854 | 426 | 19 | 8 | 833 | 4 | 820 | 0.0 | 612 |
Msa0836870 | MtrunA17_Chr5g0403291 | 64.706 | 391 | 88 | 2 | 125 | 471 | 1 | 385 | 9.01e-164 | 485 |
Msa0836870 | MtrunA17_Chr8g0374491 | 52.814 | 462 | 201 | 7 | 373 | 831 | 4 | 451 | 4.52e-149 | 446 |
Msa0836870 | MtrunA17_Chr5g0402761 | 61.311 | 305 | 95 | 6 | 1 | 297 | 1 | 290 | 3.91e-109 | 336 |
Msa0836870 | MtrunA17_Chr1g0153991 | 33.127 | 646 | 390 | 13 | 193 | 832 | 213 | 822 | 1.16e-108 | 352 |
Msa0836870 | MtrunA17_Chr1g0153981 | 29.660 | 853 | 531 | 19 | 10 | 831 | 8 | 822 | 2.02e-108 | 352 |
Msa0836870 | MtrunA17_Chr5g0402701 | 52.218 | 293 | 130 | 1 | 1 | 293 | 1 | 283 | 2.57e-79 | 264 |
Msa0836870 | MtrunA17_Chr7g0223451 | 48.634 | 183 | 90 | 2 | 437 | 619 | 7 | 185 | 1.64e-48 | 170 |
Msa0836870 | MtrunA17_Chr5g0402751 | 65.385 | 104 | 28 | 2 | 344 | 447 | 88 | 183 | 5.62e-35 | 132 |
Msa0836870 | MtrunA17_Chr5g0402751 | 56.471 | 85 | 33 | 2 | 124 | 207 | 6 | 87 | 4.39e-18 | 83.2 |
Msa0836870 | MtrunA17_Chr7g0223441 | 48.148 | 135 | 65 | 3 | 699 | 832 | 2 | 132 | 3.21e-32 | 121 |
Msa0836870 | MtrunA17_Chr5g0402741 | 92.453 | 53 | 4 | 0 | 533 | 585 | 1 | 53 | 4.29e-27 | 104 |
Msa0836870 | MtrunA17_Chr5g0403281 | 75.362 | 69 | 17 | 0 | 1 | 69 | 1 | 69 | 4.18e-26 | 102 |
Msa0836870 | MtrunA17_Chr5g0410001 | 26.744 | 516 | 309 | 22 | 18 | 502 | 33 | 510 | 3.65e-23 | 105 |
Msa0836870 | MtrunA17_Chr5g0410031 | 26.163 | 516 | 312 | 19 | 18 | 502 | 34 | 511 | 6.41e-23 | 105 |
Msa0836870 | MtrunA17_Chr1g0159111 | 22.902 | 572 | 378 | 16 | 129 | 677 | 121 | 652 | 1.07e-22 | 104 |
Msa0836870 | MtrunA17_Chr5g0404741 | 31.657 | 338 | 194 | 14 | 182 | 502 | 191 | 508 | 2.86e-22 | 103 |
Msa0836870 | MtrunA17_Chr3g0081341 | 26.715 | 685 | 394 | 32 | 157 | 783 | 234 | 868 | 3.00e-22 | 103 |
Msa0836870 | MtrunA17_Chr2g0299841 | 24.328 | 670 | 367 | 26 | 180 | 809 | 254 | 823 | 4.67e-21 | 99.4 |
Msa0836870 | MtrunA17_Chr5g0410021 | 27.520 | 367 | 232 | 14 | 157 | 502 | 154 | 507 | 9.63e-19 | 91.7 |
Msa0836870 | MtrunA17_Chr2g0319851 | 23.065 | 659 | 408 | 25 | 160 | 783 | 226 | 820 | 1.51e-18 | 91.3 |
Msa0836870 | MtrunA17_Chr5g0415511 | 25.000 | 668 | 373 | 30 | 124 | 752 | 122 | 700 | 1.66e-18 | 90.5 |
Msa0836870 | MtrunA17_Chr2g0299811 | 23.913 | 690 | 384 | 26 | 162 | 809 | 39 | 629 | 1.88e-18 | 90.5 |
Msa0836870 | MtrunA17_Chr5g0409991 | 27.473 | 364 | 231 | 14 | 157 | 502 | 157 | 505 | 2.99e-18 | 90.1 |
Msa0836870 | MtrunA17_Chr2g0299851 | 24.807 | 649 | 351 | 27 | 177 | 786 | 210 | 760 | 5.18e-18 | 89.7 |
Msa0836870 | MtrunA17_Chr3g0097631 | 27.586 | 319 | 198 | 11 | 188 | 493 | 1 | 299 | 5.31e-18 | 87.0 |
Msa0836870 | MtrunA17_Chr3g0100761 | 26.471 | 374 | 228 | 16 | 157 | 502 | 127 | 481 | 9.34e-18 | 88.2 |
Msa0836870 | MtrunA17_Chr5g0409971 | 27.297 | 370 | 228 | 14 | 157 | 502 | 158 | 510 | 1.03e-17 | 88.6 |
Msa0836870 | MtrunA17_Chr3g0100971 | 27.467 | 375 | 223 | 18 | 157 | 502 | 167 | 521 | 1.12e-17 | 88.2 |
Msa0836870 | MtrunA17_Chr3g0080771 | 23.810 | 651 | 389 | 26 | 157 | 726 | 172 | 796 | 1.49e-17 | 87.8 |
Msa0836870 | MtrunA17_Chr3g0107211 | 31.212 | 330 | 182 | 17 | 185 | 493 | 172 | 477 | 2.34e-17 | 87.4 |
Msa0836870 | MtrunA17_Chr3g0101011 | 26.866 | 335 | 207 | 15 | 158 | 464 | 183 | 507 | 2.70e-17 | 87.0 |
Msa0836870 | MtrunA17_Chr3g0101221 | 26.667 | 360 | 196 | 20 | 149 | 466 | 163 | 496 | 3.16e-17 | 86.7 |
Msa0836870 | MtrunA17_Chr6g0455031 | 23.776 | 715 | 421 | 31 | 105 | 790 | 160 | 779 | 3.42e-17 | 86.7 |
Msa0836870 | MtrunA17_Chr2g0299921 | 24.961 | 649 | 350 | 27 | 177 | 786 | 209 | 759 | 4.65e-17 | 86.7 |
Msa0836870 | MtrunA17_Chr1g0151481 | 26.203 | 374 | 230 | 15 | 157 | 502 | 172 | 527 | 5.33e-17 | 86.3 |
Msa0836870 | MtrunA17_Chr3g0081191 | 25.405 | 740 | 423 | 33 | 157 | 793 | 171 | 884 | 6.41e-17 | 85.9 |
Msa0836870 | MtrunA17_Chr3g0081361 | 25.121 | 824 | 461 | 42 | 121 | 819 | 137 | 929 | 1.06e-16 | 85.1 |
Msa0836870 | MtrunA17_Chr7g0221481 | 24.468 | 564 | 332 | 22 | 180 | 723 | 183 | 672 | 1.45e-16 | 84.7 |
Msa0836870 | MtrunA17_Chr1g0189351 | 27.761 | 335 | 204 | 15 | 157 | 464 | 167 | 490 | 1.48e-16 | 84.7 |
Msa0836870 | MtrunA17_Chr3g0100961 | 23.522 | 761 | 419 | 34 | 157 | 803 | 170 | 881 | 1.55e-16 | 84.7 |
Msa0836870 | MtrunA17_Chr3g0097641 | 30.537 | 298 | 169 | 13 | 182 | 457 | 142 | 423 | 1.65e-16 | 84.7 |
Msa0836870 | MtrunA17_Chr3g0101331 | 28.035 | 346 | 203 | 14 | 157 | 468 | 172 | 505 | 1.87e-16 | 84.3 |
Msa0836870 | MtrunA17_Chr2g0299791 | 24.695 | 656 | 346 | 30 | 178 | 776 | 211 | 775 | 2.21e-16 | 84.3 |
Msa0836870 | MtrunA17_Chr2g0299001 | 21.916 | 762 | 436 | 25 | 158 | 793 | 162 | 890 | 6.47e-16 | 82.4 |
Msa0836870 | MtrunA17_Chr7g0257201 | 21.461 | 671 | 427 | 22 | 182 | 780 | 197 | 839 | 6.59e-16 | 82.4 |
Msa0836870 | MtrunA17_Chr1g0189271 | 27.019 | 322 | 200 | 15 | 157 | 455 | 7 | 316 | 9.13e-16 | 79.3 |
Msa0836870 | MtrunA17_Chr8g0363851 | 25.144 | 696 | 401 | 33 | 162 | 789 | 8 | 651 | 1.08e-15 | 82.0 |
Msa0836870 | MtrunA17_Chr3g0081211 | 26.190 | 378 | 240 | 15 | 149 | 502 | 162 | 524 | 1.24e-15 | 81.6 |
Msa0836870 | MtrunA17_Chr6g0482111 | 22.665 | 653 | 382 | 24 | 193 | 813 | 229 | 790 | 1.37e-15 | 81.6 |
Msa0836870 | MtrunA17_Chr3g0101241 | 26.997 | 363 | 197 | 17 | 144 | 466 | 135 | 469 | 1.91e-15 | 80.9 |
Msa0836870 | MtrunA17_Chr3g0101271 | 26.997 | 363 | 197 | 17 | 144 | 466 | 135 | 469 | 1.97e-15 | 80.9 |
Msa0836870 | MtrunA17_Chr3g0105521 | 25.743 | 505 | 285 | 22 | 173 | 652 | 43 | 482 | 2.65e-15 | 80.9 |
Msa0836870 | MtrunA17_Chr8g0348541 | 24.138 | 754 | 454 | 33 | 93 | 793 | 135 | 823 | 3.00e-15 | 80.5 |
Msa0836870 | MtrunA17_Chr3g0100831 | 25.191 | 655 | 357 | 35 | 157 | 771 | 170 | 731 | 3.22e-15 | 80.5 |
Msa0836870 | MtrunA17_Chr3g0101181 | 24.545 | 440 | 263 | 16 | 158 | 551 | 180 | 596 | 4.14e-15 | 80.1 |
Msa0836870 | MtrunA17_Chr3g0105571 | 25.373 | 536 | 306 | 22 | 150 | 652 | 82 | 556 | 4.56e-15 | 79.3 |
Msa0836870 | MtrunA17_Chr1g0164391 | 24.885 | 655 | 362 | 28 | 126 | 739 | 124 | 689 | 4.80e-15 | 80.1 |
Msa0836870 | MtrunA17_Chr6g0455221 | 23.040 | 625 | 337 | 26 | 179 | 782 | 211 | 712 | 5.23e-15 | 79.7 |
Msa0836870 | MtrunA17_Chr4g0027251 | 26.440 | 382 | 224 | 15 | 150 | 500 | 143 | 498 | 5.49e-15 | 79.7 |
Msa0836870 | MtrunA17_Chr4g0048421 | 21.867 | 407 | 272 | 13 | 129 | 510 | 121 | 506 | 5.82e-15 | 79.3 |
Msa0836870 | MtrunA17_Chr3g0101201 | 23.192 | 733 | 445 | 34 | 149 | 832 | 166 | 829 | 6.89e-15 | 79.3 |
Msa0836870 | MtrunA17_Chr3g0101231 | 23.382 | 757 | 432 | 35 | 157 | 845 | 180 | 856 | 7.74e-15 | 79.0 |
Msa0836870 | MtrunA17_Chr3g0081391 | 28.042 | 378 | 217 | 19 | 157 | 502 | 171 | 525 | 8.15e-15 | 79.0 |
Msa0836870 | MtrunA17_Chr4g0048471 | 23.483 | 379 | 239 | 13 | 160 | 510 | 26 | 381 | 8.17e-15 | 79.0 |
Msa0836870 | MtrunA17_Chr7g0248221 | 24.066 | 669 | 408 | 28 | 178 | 779 | 188 | 823 | 8.38e-15 | 79.0 |
Msa0836870 | MtrunA17_Chr2g0319921 | 24.590 | 488 | 262 | 19 | 339 | 792 | 384 | 799 | 9.01e-15 | 79.0 |
Msa0836870 | MtrunA17_Chr3g0081531 | 22.964 | 614 | 327 | 23 | 265 | 817 | 290 | 818 | 1.06e-14 | 79.0 |
Msa0836870 | MtrunA17_Chr3g0081371 | 24.430 | 745 | 427 | 29 | 156 | 793 | 179 | 894 | 1.14e-14 | 78.6 |
Msa0836870 | MtrunA17_Chr3g0107181 | 26.933 | 401 | 240 | 17 | 126 | 500 | 95 | 468 | 1.16e-14 | 78.6 |
Msa0836870 | MtrunA17_Chr4g0041441 | 22.883 | 673 | 379 | 26 | 160 | 800 | 179 | 743 | 1.17e-14 | 78.6 |
Msa0836870 | MtrunA17_Chr2g0313461 | 22.414 | 812 | 468 | 37 | 9 | 771 | 6 | 704 | 2.65e-14 | 77.4 |
Msa0836870 | MtrunA17_Chr6g0454971 | 22.835 | 635 | 383 | 26 | 179 | 787 | 246 | 799 | 4.56e-14 | 76.6 |
Msa0836870 | MtrunA17_Chr1g0189551 | 24.281 | 626 | 358 | 29 | 178 | 780 | 215 | 747 | 5.27e-14 | 76.3 |
Msa0836870 | MtrunA17_Chr3g0112511 | 25.000 | 684 | 392 | 38 | 157 | 792 | 161 | 771 | 5.72e-14 | 76.3 |
Msa0836870 | MtrunA17_Chr3g0100801 | 26.901 | 342 | 197 | 15 | 157 | 468 | 135 | 453 | 6.41e-14 | 75.9 |
Msa0836870 | MtrunA17_Chr4g0071021 | 27.485 | 342 | 188 | 12 | 129 | 436 | 105 | 420 | 8.48e-14 | 74.7 |
Msa0836870 | MtrunA17_Chr1g0169901 | 26.133 | 662 | 372 | 35 | 182 | 783 | 186 | 790 | 9.48e-14 | 75.5 |
Msa0836870 | MtrunA17_Chr5g0430511 | 24.074 | 648 | 373 | 23 | 104 | 723 | 100 | 656 | 1.33e-13 | 75.1 |
Msa0836870 | MtrunA17_Chr5g0430721 | 29.688 | 320 | 167 | 15 | 150 | 436 | 184 | 478 | 1.39e-13 | 75.1 |
Msa0836870 | MtrunA17_Chr5g0414201 | 24.036 | 674 | 395 | 27 | 77 | 723 | 77 | 660 | 1.57e-13 | 74.7 |
Msa0836870 | MtrunA17_Chr2g0313541 | 21.783 | 785 | 469 | 33 | 28 | 771 | 20 | 700 | 2.08e-13 | 74.7 |
Msa0836870 | MtrunA17_Chr8g0338671 | 25.000 | 376 | 223 | 15 | 150 | 494 | 39 | 386 | 2.50e-13 | 73.9 |
Msa0836870 | MtrunA17_Chr1g0160951 | 30.651 | 261 | 146 | 11 | 185 | 429 | 72 | 313 | 2.94e-13 | 74.3 |
Msa0836870 | MtrunA17_Chr3g0105551 | 28.226 | 372 | 228 | 16 | 141 | 493 | 118 | 469 | 3.15e-13 | 74.3 |
Msa0836870 | MtrunA17_Chr3g0108101 | 30.769 | 260 | 149 | 12 | 188 | 432 | 1 | 244 | 3.58e-13 | 70.9 |
Msa0836870 | MtrunA17_Chr3g0100851 | 24.932 | 369 | 218 | 16 | 157 | 498 | 60 | 396 | 4.03e-13 | 73.6 |
Msa0836870 | MtrunA17_Chr2g0314301 | 21.242 | 805 | 484 | 34 | 9 | 771 | 6 | 702 | 4.99e-13 | 73.6 |
Msa0836870 | MtrunA17_Chr6g0468341 | 27.907 | 301 | 189 | 10 | 150 | 436 | 146 | 432 | 6.01e-13 | 72.8 |
Msa0836870 | MtrunA17_Chr7g0229721 | 25.673 | 557 | 345 | 22 | 185 | 707 | 170 | 691 | 7.81e-13 | 72.8 |
Msa0836870 | MtrunA17_Chr8g0343631 | 22.778 | 720 | 400 | 25 | 131 | 802 | 188 | 799 | 8.38e-13 | 72.4 |
Msa0836870 | MtrunA17_Chr3g0101321 | 22.880 | 743 | 430 | 30 | 157 | 793 | 166 | 871 | 8.85e-13 | 72.4 |
Msa0836870 | MtrunA17_Chr6g0468451 | 27.747 | 364 | 228 | 14 | 145 | 493 | 142 | 485 | 1.25e-12 | 72.0 |
Msa0836870 | MtrunA17_Chr7g0255111 | 25.150 | 334 | 206 | 14 | 185 | 500 | 182 | 489 | 1.29e-12 | 72.0 |
Msa0836870 | MtrunA17_Chr5g0430581 | 23.386 | 697 | 424 | 27 | 150 | 782 | 138 | 788 | 1.42e-12 | 71.6 |
Msa0836870 | MtrunA17_Chr2g0313591 | 21.287 | 808 | 449 | 35 | 28 | 771 | 20 | 704 | 1.64e-12 | 71.6 |
Msa0836870 | MtrunA17_Chr5g0414181 | 26.683 | 401 | 230 | 17 | 127 | 493 | 125 | 495 | 1.69e-12 | 71.6 |
Msa0836870 | MtrunA17_Chr6g0478721 | 22.162 | 370 | 255 | 9 | 160 | 510 | 69 | 424 | 1.74e-12 | 71.2 |
Msa0836870 | MtrunA17_Chr8g0360991 | 24.233 | 326 | 211 | 11 | 187 | 498 | 178 | 481 | 1.86e-12 | 71.6 |
Msa0836870 | MtrunA17_Chr5g0443761 | 21.067 | 750 | 455 | 25 | 169 | 819 | 20 | 731 | 3.61e-12 | 70.5 |
Msa0836870 | MtrunA17_Chr6g0485991 | 21.761 | 795 | 455 | 31 | 93 | 815 | 131 | 830 | 3.83e-12 | 70.5 |
Msa0836870 | MtrunA17_Chr3g0086621 | 22.649 | 755 | 458 | 33 | 1 | 723 | 1 | 661 | 4.07e-12 | 70.5 |
Msa0836870 | MtrunA17_Chr4g0009781 | 23.477 | 673 | 371 | 28 | 102 | 723 | 93 | 672 | 4.81e-12 | 70.1 |
Msa0836870 | MtrunA17_Chr5g0414231 | 27.405 | 343 | 197 | 13 | 124 | 436 | 122 | 442 | 5.31e-12 | 69.3 |
Msa0836870 | MtrunA17_Chr3g0096821 | 28.448 | 348 | 199 | 14 | 170 | 493 | 146 | 467 | 5.36e-12 | 70.1 |
Msa0836870 | MtrunA17_Chr5g0430621 | 23.122 | 679 | 378 | 23 | 150 | 790 | 143 | 715 | 6.62e-12 | 69.7 |
Msa0836870 | MtrunA17_Chr3g0082131 | 25.201 | 623 | 328 | 28 | 146 | 723 | 154 | 683 | 6.69e-12 | 69.7 |
Msa0836870 | MtrunA17_Chr6g0470021 | 27.297 | 370 | 216 | 16 | 150 | 493 | 36 | 378 | 6.78e-12 | 69.3 |
Msa0836870 | MtrunA17_Chr8g0346831 | 23.897 | 544 | 344 | 21 | 178 | 687 | 189 | 696 | 7.05e-12 | 69.7 |
Msa0836870 | MtrunA17_Chr7g0229751 | 23.966 | 580 | 337 | 23 | 170 | 703 | 103 | 624 | 7.72e-12 | 69.3 |
Msa0836870 | MtrunA17_Chr3g0099571 | 27.273 | 275 | 179 | 10 | 169 | 433 | 161 | 424 | 8.69e-12 | 69.3 |
Msa0836870 | MtrunA17_Chr3g0100681 | 26.730 | 318 | 187 | 17 | 181 | 468 | 9 | 310 | 9.35e-12 | 68.6 |
Msa0836870 | MtrunA17_Chr6g0470011 | 27.327 | 333 | 196 | 14 | 181 | 493 | 181 | 487 | 1.80e-11 | 68.2 |
Msa0836870 | MtrunA17_Chr6g0455251 | 24.597 | 496 | 288 | 19 | 335 | 782 | 379 | 836 | 2.12e-11 | 68.2 |
Msa0836870 | MtrunA17_Chr3g0101251 | 25.074 | 339 | 191 | 15 | 149 | 466 | 160 | 456 | 2.38e-11 | 67.8 |
Msa0836870 | MtrunA17_Chr6g0470081 | 26.870 | 361 | 213 | 15 | 158 | 493 | 153 | 487 | 2.69e-11 | 67.8 |
Msa0836870 | MtrunA17_Chr3g0123111 | 24.483 | 580 | 350 | 21 | 143 | 701 | 137 | 649 | 3.51e-11 | 67.4 |
Msa0836870 | MtrunA17_Chr5g0430951 | 26.216 | 370 | 226 | 17 | 150 | 493 | 143 | 491 | 3.55e-11 | 67.0 |
Msa0836870 | MtrunA17_Chr2g0319821 | 33.562 | 146 | 76 | 4 | 668 | 794 | 757 | 900 | 3.72e-11 | 67.4 |
Msa0836870 | MtrunA17_Chr4g0005401 | 24.191 | 587 | 326 | 25 | 248 | 793 | 285 | 793 | 3.95e-11 | 67.0 |
Msa0836870 | MtrunA17_Chr3g0096721 | 28.406 | 345 | 203 | 15 | 170 | 493 | 150 | 471 | 4.06e-11 | 67.0 |
Msa0836870 | MtrunA17_Chr3g0081181 | 25.127 | 394 | 244 | 21 | 141 | 502 | 135 | 509 | 5.31e-11 | 66.6 |
Msa0836870 | MtrunA17_Chr3g0086151 | 23.169 | 751 | 459 | 32 | 1 | 723 | 1 | 661 | 5.38e-11 | 66.6 |
Msa0836870 | MtrunA17_Chr7g0257541 | 23.657 | 689 | 393 | 28 | 178 | 779 | 197 | 839 | 6.65e-11 | 66.2 |
Msa0836870 | MtrunA17_Chr3g0108821 | 29.811 | 265 | 155 | 13 | 182 | 432 | 168 | 415 | 6.97e-11 | 66.6 |
Msa0836870 | MtrunA17_Chr8g0338621 | 25.589 | 297 | 188 | 13 | 158 | 436 | 165 | 446 | 7.61e-11 | 65.9 |
Msa0836870 | MtrunA17_Chr8g0351821 | 30.970 | 268 | 158 | 11 | 181 | 436 | 181 | 433 | 7.81e-11 | 65.5 |
Msa0836870 | MtrunA17_Chr2g0313491 | 22.273 | 440 | 278 | 16 | 53 | 462 | 48 | 453 | 7.92e-11 | 66.2 |
Msa0836870 | MtrunA17_Chr4g0010201 | 24.080 | 598 | 337 | 24 | 158 | 723 | 159 | 671 | 8.62e-11 | 66.2 |
Msa0836870 | MtrunA17_Chr1g0146241 | 24.648 | 284 | 183 | 11 | 164 | 433 | 165 | 431 | 9.28e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0836870 | AT5G66900.1 | 36.686 | 845 | 474 | 19 | 5 | 832 | 7 | 807 | 6.28e-150 | 461 |
Msa0836870 | AT5G66900.2 | 36.686 | 845 | 474 | 19 | 5 | 832 | 55 | 855 | 4.81e-149 | 460 |
Msa0836870 | AT5G66910.1 | 36.867 | 849 | 464 | 19 | 7 | 831 | 12 | 812 | 1.00e-142 | 442 |
Msa0836870 | AT4G33300.2 | 33.065 | 868 | 474 | 23 | 10 | 831 | 8 | 814 | 1.66e-120 | 384 |
Msa0836870 | AT4G33300.1 | 33.065 | 868 | 474 | 23 | 10 | 831 | 8 | 814 | 1.66e-120 | 384 |
Msa0836870 | AT5G47280.1 | 32.625 | 659 | 389 | 16 | 180 | 830 | 9 | 620 | 1.11e-105 | 339 |
Msa0836870 | AT5G04720.1 | 33.432 | 679 | 394 | 19 | 162 | 831 | 180 | 809 | 1.51e-104 | 342 |
Msa0836870 | AT1G33560.1 | 33.384 | 656 | 367 | 18 | 185 | 831 | 191 | 785 | 2.42e-99 | 327 |
Msa0836870 | AT5G66890.1 | 38.551 | 428 | 225 | 9 | 412 | 832 | 17 | 413 | 6.72e-77 | 256 |
Msa0836870 | AT5G66900.3 | 32.638 | 527 | 329 | 13 | 5 | 520 | 55 | 566 | 1.59e-67 | 236 |
Msa0836870 | AT5G66630.1 | 31.034 | 319 | 215 | 4 | 1 | 315 | 6 | 323 | 8.35e-38 | 151 |
Msa0836870 | AT1G69550.1 | 26.265 | 731 | 417 | 31 | 96 | 793 | 198 | 839 | 1.21e-26 | 118 |
Msa0836870 | AT1G69550.1 | 34.973 | 183 | 104 | 4 | 619 | 793 | 904 | 1079 | 2.38e-20 | 97.8 |
Msa0836870 | AT1G69550.1 | 30.918 | 207 | 104 | 4 | 619 | 793 | 784 | 983 | 3.79e-18 | 90.5 |
Msa0836870 | AT1G69550.1 | 35.556 | 180 | 106 | 5 | 619 | 793 | 1024 | 1198 | 4.38e-18 | 90.5 |
Msa0836870 | AT1G69550.1 | 34.078 | 179 | 103 | 4 | 619 | 789 | 928 | 1099 | 6.22e-18 | 89.7 |
Msa0836870 | AT1G69550.1 | 39.837 | 123 | 74 | 0 | 671 | 793 | 885 | 1007 | 1.52e-17 | 88.6 |
Msa0836870 | AT1G69550.1 | 33.529 | 170 | 103 | 3 | 619 | 783 | 1048 | 1212 | 2.40e-15 | 81.3 |
Msa0836870 | AT1G69550.1 | 33.880 | 183 | 106 | 4 | 619 | 793 | 760 | 935 | 7.61e-14 | 76.6 |
Msa0836870 | AT3G04220.1 | 22.639 | 667 | 421 | 27 | 160 | 794 | 236 | 839 | 7.83e-23 | 105 |
Msa0836870 | AT3G50950.2 | 24.157 | 741 | 419 | 32 | 30 | 723 | 19 | 663 | 2.57e-22 | 103 |
Msa0836870 | AT3G50950.1 | 24.157 | 741 | 419 | 32 | 30 | 723 | 19 | 663 | 2.57e-22 | 103 |
Msa0836870 | AT1G59780.2 | 26.016 | 369 | 257 | 11 | 147 | 504 | 141 | 504 | 1.43e-21 | 101 |
Msa0836870 | AT3G04220.3 | 22.222 | 684 | 432 | 29 | 160 | 794 | 236 | 868 | 1.72e-21 | 100 |
Msa0836870 | AT3G04220.3 | 29.891 | 184 | 110 | 5 | 619 | 793 | 716 | 889 | 1.01e-14 | 79.0 |
Msa0836870 | AT1G59780.1 | 26.016 | 369 | 257 | 11 | 147 | 504 | 146 | 509 | 2.10e-21 | 100 |
Msa0836870 | AT1G61190.4 | 27.835 | 388 | 228 | 14 | 133 | 494 | 123 | 484 | 4.14e-21 | 99.8 |
Msa0836870 | AT1G53350.1 | 23.944 | 497 | 327 | 18 | 40 | 502 | 29 | 508 | 5.22e-21 | 99.4 |
Msa0836870 | AT1G61190.2 | 27.835 | 388 | 228 | 14 | 133 | 494 | 123 | 484 | 5.23e-21 | 99.4 |
Msa0836870 | AT1G61190.3 | 27.835 | 388 | 228 | 14 | 133 | 494 | 123 | 484 | 5.23e-21 | 99.4 |
Msa0836870 | AT1G61190.1 | 28.093 | 388 | 227 | 14 | 133 | 494 | 123 | 484 | 1.65e-20 | 97.8 |
Msa0836870 | AT5G43470.3 | 24.158 | 505 | 321 | 19 | 42 | 511 | 38 | 515 | 2.65e-20 | 97.1 |
Msa0836870 | AT5G43470.2 | 24.158 | 505 | 321 | 19 | 42 | 511 | 38 | 515 | 2.65e-20 | 97.1 |
Msa0836870 | AT5G43470.4 | 24.158 | 505 | 321 | 19 | 42 | 511 | 38 | 515 | 2.65e-20 | 97.1 |
Msa0836870 | AT5G43470.1 | 24.158 | 505 | 321 | 19 | 42 | 511 | 38 | 515 | 2.65e-20 | 97.1 |
Msa0836870 | AT1G12290.1 | 26.184 | 359 | 223 | 9 | 156 | 494 | 151 | 487 | 3.63e-20 | 96.7 |
Msa0836870 | AT1G12290.4 | 26.184 | 359 | 223 | 9 | 156 | 494 | 109 | 445 | 4.46e-20 | 96.3 |
Msa0836870 | AT1G12290.3 | 26.184 | 359 | 223 | 9 | 156 | 494 | 109 | 445 | 4.46e-20 | 96.3 |
Msa0836870 | AT1G12290.2 | 26.184 | 359 | 223 | 9 | 156 | 494 | 109 | 445 | 4.46e-20 | 96.3 |
Msa0836870 | AT1G59620.2 | 23.836 | 730 | 456 | 32 | 145 | 801 | 11 | 713 | 5.50e-20 | 95.9 |
Msa0836870 | AT5G11250.3 | 23.077 | 728 | 456 | 29 | 103 | 794 | 105 | 764 | 9.74e-20 | 95.5 |
Msa0836870 | AT5G11250.3 | 30.242 | 248 | 140 | 6 | 567 | 814 | 636 | 850 | 8.69e-15 | 79.3 |
Msa0836870 | AT5G11250.1 | 23.077 | 728 | 456 | 29 | 103 | 794 | 105 | 764 | 9.74e-20 | 95.5 |
Msa0836870 | AT5G11250.1 | 30.242 | 248 | 140 | 6 | 567 | 814 | 636 | 850 | 8.69e-15 | 79.3 |
Msa0836870 | AT5G11250.2 | 22.940 | 728 | 457 | 29 | 103 | 794 | 187 | 846 | 1.01e-19 | 95.5 |
Msa0836870 | AT5G11250.2 | 30.242 | 248 | 140 | 6 | 567 | 814 | 718 | 932 | 8.94e-15 | 79.3 |
Msa0836870 | AT1G61180.2 | 27.072 | 362 | 211 | 11 | 156 | 494 | 149 | 480 | 1.95e-19 | 94.4 |
Msa0836870 | AT1G61180.1 | 27.072 | 362 | 211 | 11 | 156 | 494 | 149 | 480 | 2.43e-19 | 94.0 |
Msa0836870 | AT1G61310.1 | 29.006 | 362 | 215 | 13 | 156 | 494 | 151 | 493 | 2.78e-19 | 94.0 |
Msa0836870 | AT1G12220.1 | 26.648 | 349 | 232 | 11 | 156 | 494 | 152 | 486 | 3.65e-19 | 93.6 |
Msa0836870 | AT1G12220.2 | 26.648 | 349 | 232 | 11 | 156 | 494 | 152 | 486 | 3.65e-19 | 93.6 |
Msa0836870 | AT1G58410.1 | 23.829 | 491 | 332 | 19 | 42 | 504 | 36 | 512 | 3.97e-19 | 93.2 |
Msa0836870 | AT1G58410.4 | 23.829 | 491 | 332 | 19 | 42 | 504 | 36 | 512 | 3.97e-19 | 93.2 |
Msa0836870 | AT1G58410.2 | 23.829 | 491 | 332 | 19 | 42 | 504 | 36 | 512 | 3.97e-19 | 93.2 |
Msa0836870 | AT1G12220.3 | 26.648 | 349 | 232 | 11 | 156 | 494 | 31 | 365 | 5.09e-19 | 92.8 |
Msa0836870 | AT1G12280.1 | 23.393 | 389 | 274 | 9 | 140 | 517 | 132 | 507 | 1.07e-18 | 92.0 |
Msa0836870 | AT5G48620.6 | 23.105 | 541 | 345 | 19 | 5 | 504 | 1 | 511 | 1.26e-18 | 91.7 |
Msa0836870 | AT5G48620.1 | 23.105 | 541 | 345 | 19 | 5 | 504 | 1 | 511 | 1.26e-18 | 91.7 |
Msa0836870 | AT5G48620.4 | 23.105 | 541 | 345 | 19 | 5 | 504 | 1 | 511 | 1.26e-18 | 91.7 |
Msa0836870 | AT5G48620.2 | 23.105 | 541 | 345 | 19 | 5 | 504 | 1 | 511 | 1.26e-18 | 91.7 |
Msa0836870 | AT5G48620.3 | 23.105 | 541 | 345 | 19 | 5 | 504 | 1 | 511 | 1.26e-18 | 91.7 |
Msa0836870 | AT5G48620.5 | 23.105 | 541 | 345 | 19 | 5 | 504 | 1 | 511 | 1.26e-18 | 91.7 |
Msa0836870 | AT1G27180.3 | 25.387 | 646 | 387 | 24 | 162 | 786 | 201 | 772 | 1.42e-18 | 91.7 |
Msa0836870 | AT1G61300.2 | 28.093 | 388 | 223 | 15 | 132 | 494 | 13 | 369 | 1.51e-18 | 91.3 |
Msa0836870 | AT1G61300.1 | 28.093 | 388 | 223 | 15 | 132 | 494 | 13 | 369 | 2.06e-18 | 90.9 |
Msa0836870 | AT1G27180.1 | 25.387 | 646 | 387 | 24 | 162 | 786 | 363 | 934 | 2.07e-18 | 91.3 |
Msa0836870 | AT1G27180.2 | 25.387 | 646 | 387 | 24 | 162 | 786 | 201 | 772 | 2.17e-18 | 91.3 |
Msa0836870 | AT3G07040.1 | 25.111 | 450 | 274 | 22 | 88 | 502 | 99 | 520 | 3.38e-18 | 90.5 |
Msa0836870 | AT1G27180.5 | 25.387 | 646 | 387 | 24 | 162 | 786 | 199 | 770 | 3.72e-18 | 90.5 |
Msa0836870 | AT1G27180.8 | 25.387 | 646 | 387 | 24 | 162 | 786 | 199 | 770 | 3.72e-18 | 90.5 |
Msa0836870 | AT1G27180.7 | 25.387 | 646 | 387 | 24 | 162 | 786 | 25 | 596 | 4.95e-18 | 90.1 |
Msa0836870 | AT1G27180.6 | 25.387 | 646 | 387 | 24 | 162 | 786 | 25 | 596 | 4.95e-18 | 90.1 |
Msa0836870 | AT1G27180.4 | 25.387 | 646 | 387 | 24 | 162 | 786 | 25 | 596 | 4.95e-18 | 90.1 |
Msa0836870 | AT1G59124.1 | 23.288 | 657 | 393 | 25 | 147 | 771 | 149 | 726 | 1.74e-17 | 88.2 |
Msa0836870 | AT1G58807.2 | 23.288 | 657 | 393 | 25 | 147 | 771 | 149 | 726 | 1.74e-17 | 88.2 |
Msa0836870 | AT1G63350.4 | 22.621 | 725 | 441 | 29 | 126 | 783 | 126 | 797 | 2.24e-17 | 87.8 |
Msa0836870 | AT1G59124.2 | 23.288 | 657 | 393 | 25 | 147 | 771 | 149 | 726 | 2.38e-17 | 87.8 |
Msa0836870 | AT1G58807.1 | 23.288 | 657 | 393 | 25 | 147 | 771 | 149 | 726 | 2.38e-17 | 87.8 |
Msa0836870 | AT5G17680.1 | 22.493 | 738 | 450 | 29 | 98 | 793 | 133 | 790 | 2.55e-17 | 87.8 |
Msa0836870 | AT3G25510.2 | 28.085 | 235 | 147 | 4 | 567 | 792 | 502 | 723 | 4.35e-17 | 87.0 |
Msa0836870 | AT3G25510.2 | 28.986 | 207 | 134 | 5 | 588 | 789 | 570 | 768 | 1.12e-14 | 79.0 |
Msa0836870 | AT3G25510.2 | 30.808 | 198 | 112 | 8 | 619 | 792 | 479 | 675 | 5.57e-12 | 70.5 |
Msa0836870 | AT3G25510.2 | 31.447 | 159 | 99 | 3 | 671 | 825 | 674 | 826 | 7.44e-12 | 70.1 |
Msa0836870 | AT3G25510.1 | 28.085 | 235 | 147 | 4 | 567 | 792 | 502 | 723 | 4.35e-17 | 87.0 |
Msa0836870 | AT3G25510.1 | 28.986 | 207 | 134 | 5 | 588 | 789 | 570 | 768 | 1.12e-14 | 79.0 |
Msa0836870 | AT3G25510.1 | 30.808 | 198 | 112 | 8 | 619 | 792 | 479 | 675 | 5.57e-12 | 70.5 |
Msa0836870 | AT3G25510.1 | 31.447 | 159 | 99 | 3 | 671 | 825 | 674 | 826 | 7.44e-12 | 70.1 |
Msa0836870 | AT1G58400.3 | 24.603 | 378 | 255 | 13 | 147 | 504 | 150 | 517 | 5.27e-17 | 86.7 |
Msa0836870 | AT1G58400.2 | 24.603 | 378 | 255 | 13 | 147 | 504 | 150 | 517 | 5.27e-17 | 86.7 |
Msa0836870 | AT3G44630.2 | 31.163 | 215 | 120 | 7 | 601 | 789 | 668 | 880 | 7.93e-17 | 86.3 |
Msa0836870 | AT3G44630.2 | 33.813 | 139 | 91 | 1 | 648 | 786 | 764 | 901 | 1.58e-14 | 78.6 |
Msa0836870 | AT3G44630.1 | 31.163 | 215 | 120 | 7 | 601 | 789 | 668 | 880 | 7.93e-17 | 86.3 |
Msa0836870 | AT3G44630.1 | 33.813 | 139 | 91 | 1 | 648 | 786 | 764 | 901 | 1.58e-14 | 78.6 |
Msa0836870 | AT3G44630.4 | 31.163 | 215 | 120 | 7 | 601 | 789 | 668 | 880 | 7.93e-17 | 86.3 |
Msa0836870 | AT3G44630.4 | 33.813 | 139 | 91 | 1 | 648 | 786 | 764 | 901 | 1.58e-14 | 78.6 |
Msa0836870 | AT3G44630.3 | 31.163 | 215 | 120 | 7 | 601 | 789 | 668 | 880 | 9.65e-17 | 85.9 |
Msa0836870 | AT3G44630.3 | 33.813 | 139 | 91 | 1 | 648 | 786 | 764 | 901 | 1.91e-14 | 78.6 |
Msa0836870 | AT5G17680.2 | 22.973 | 740 | 445 | 31 | 98 | 793 | 133 | 791 | 1.38e-16 | 85.5 |
Msa0836870 | AT5G44510.2 | 33.333 | 159 | 100 | 2 | 641 | 799 | 656 | 808 | 1.88e-16 | 85.1 |
Msa0836870 | AT5G44510.2 | 32.432 | 148 | 75 | 2 | 669 | 792 | 727 | 873 | 6.59e-15 | 80.1 |
Msa0836870 | AT5G44510.2 | 33.333 | 141 | 93 | 1 | 653 | 793 | 640 | 779 | 2.74e-14 | 77.8 |
Msa0836870 | AT5G44510.2 | 35.294 | 119 | 77 | 0 | 671 | 789 | 705 | 823 | 3.03e-14 | 77.8 |
Msa0836870 | AT5G44510.2 | 28.177 | 181 | 120 | 5 | 619 | 794 | 772 | 947 | 3.30e-11 | 67.8 |
Msa0836870 | AT5G44510.1 | 33.333 | 159 | 100 | 2 | 641 | 799 | 656 | 808 | 2.01e-16 | 84.7 |
Msa0836870 | AT5G44510.1 | 32.432 | 148 | 75 | 2 | 669 | 792 | 727 | 873 | 7.47e-15 | 79.7 |
Msa0836870 | AT5G44510.1 | 33.333 | 141 | 93 | 1 | 653 | 793 | 640 | 779 | 2.97e-14 | 77.8 |
Msa0836870 | AT5G44510.1 | 35.294 | 119 | 77 | 0 | 671 | 789 | 705 | 823 | 3.21e-14 | 77.8 |
Msa0836870 | AT5G44510.1 | 28.177 | 181 | 120 | 5 | 619 | 794 | 772 | 947 | 3.49e-11 | 67.8 |
Msa0836870 | AT5G44510.3 | 33.333 | 159 | 100 | 2 | 641 | 799 | 656 | 808 | 2.17e-16 | 84.7 |
Msa0836870 | AT5G44510.3 | 32.432 | 148 | 75 | 2 | 669 | 792 | 727 | 873 | 7.22e-15 | 79.7 |
Msa0836870 | AT5G44510.3 | 33.333 | 141 | 93 | 1 | 653 | 793 | 640 | 779 | 3.29e-14 | 77.8 |
Msa0836870 | AT5G44510.3 | 35.294 | 119 | 77 | 0 | 671 | 789 | 705 | 823 | 3.47e-14 | 77.4 |
Msa0836870 | AT5G44510.3 | 28.177 | 181 | 120 | 5 | 619 | 794 | 772 | 947 | 4.29e-11 | 67.4 |
Msa0836870 | AT5G44510.4 | 33.333 | 159 | 100 | 2 | 641 | 799 | 656 | 808 | 2.51e-16 | 84.3 |
Msa0836870 | AT5G44510.4 | 32.432 | 148 | 75 | 2 | 669 | 792 | 727 | 873 | 8.15e-15 | 79.7 |
Msa0836870 | AT5G44510.4 | 33.333 | 141 | 93 | 1 | 653 | 793 | 640 | 779 | 3.53e-14 | 77.4 |
Msa0836870 | AT5G44510.4 | 35.294 | 119 | 77 | 0 | 671 | 789 | 705 | 823 | 3.95e-14 | 77.4 |
Msa0836870 | AT5G44510.4 | 28.177 | 181 | 120 | 5 | 619 | 794 | 772 | 947 | 4.89e-11 | 67.4 |
Msa0836870 | AT1G58602.2 | 25.714 | 385 | 248 | 15 | 147 | 504 | 148 | 521 | 3.00e-16 | 84.3 |
Msa0836870 | AT1G58602.1 | 25.714 | 385 | 248 | 15 | 147 | 504 | 148 | 521 | 3.00e-16 | 84.3 |
Msa0836870 | AT1G12210.1 | 26.912 | 353 | 225 | 12 | 156 | 494 | 152 | 485 | 3.05e-16 | 84.0 |
Msa0836870 | AT1G12210.3 | 26.912 | 353 | 225 | 12 | 156 | 494 | 110 | 443 | 4.69e-16 | 83.6 |
Msa0836870 | AT1G12210.2 | 26.912 | 353 | 225 | 12 | 156 | 494 | 110 | 443 | 4.69e-16 | 83.6 |
Msa0836870 | AT1G58390.1 | 23.990 | 421 | 270 | 18 | 120 | 504 | 108 | 514 | 6.88e-16 | 82.8 |
Msa0836870 | AT1G58390.2 | 23.990 | 421 | 270 | 18 | 120 | 504 | 108 | 514 | 6.88e-16 | 82.8 |
Msa0836870 | AT3G44670.1 | 22.980 | 792 | 464 | 40 | 120 | 833 | 240 | 963 | 7.36e-16 | 83.2 |
Msa0836870 | AT3G44670.2 | 22.980 | 792 | 464 | 40 | 120 | 833 | 240 | 963 | 7.36e-16 | 83.2 |
Msa0836870 | AT2G14080.1 | 30.693 | 202 | 116 | 5 | 616 | 793 | 667 | 868 | 8.50e-16 | 82.8 |
Msa0836870 | AT2G14080.1 | 22.384 | 688 | 407 | 26 | 161 | 818 | 230 | 820 | 2.99e-13 | 74.7 |
Msa0836870 | AT2G14080.1 | 31.081 | 148 | 90 | 2 | 643 | 786 | 770 | 909 | 1.78e-11 | 68.9 |
Msa0836870 | AT2G14080.2 | 30.693 | 202 | 116 | 5 | 616 | 793 | 534 | 735 | 8.81e-16 | 82.8 |
Msa0836870 | AT2G14080.2 | 22.384 | 688 | 407 | 26 | 161 | 818 | 97 | 687 | 2.87e-13 | 74.7 |
Msa0836870 | AT2G14080.2 | 31.081 | 148 | 90 | 2 | 643 | 786 | 637 | 776 | 2.12e-11 | 68.6 |
Msa0836870 | AT4G10780.1 | 25.779 | 353 | 230 | 13 | 156 | 494 | 149 | 483 | 9.10e-16 | 82.4 |
Msa0836870 | AT4G10780.2 | 25.779 | 353 | 230 | 13 | 156 | 494 | 149 | 483 | 9.32e-16 | 82.4 |
Msa0836870 | AT1G58400.1 | 23.907 | 389 | 234 | 15 | 147 | 504 | 150 | 507 | 1.25e-15 | 82.0 |
Msa0836870 | AT1G59218.1 | 25.397 | 378 | 253 | 15 | 147 | 504 | 149 | 517 | 2.00e-15 | 81.6 |
Msa0836870 | AT1G59218.2 | 25.397 | 378 | 253 | 15 | 147 | 504 | 149 | 517 | 2.00e-15 | 81.6 |
Msa0836870 | AT1G59218.3 | 25.397 | 378 | 253 | 15 | 147 | 504 | 149 | 517 | 2.00e-15 | 81.6 |
Msa0836870 | AT1G58848.1 | 25.397 | 378 | 253 | 15 | 147 | 504 | 149 | 517 | 2.00e-15 | 81.6 |
Msa0836870 | AT1G58848.2 | 25.397 | 378 | 253 | 15 | 147 | 504 | 149 | 517 | 2.00e-15 | 81.6 |
Msa0836870 | AT3G44480.2 | 39.344 | 122 | 73 | 1 | 671 | 792 | 738 | 858 | 2.62e-15 | 81.3 |
Msa0836870 | AT3G44480.2 | 32.558 | 172 | 101 | 4 | 622 | 786 | 713 | 876 | 2.90e-15 | 81.3 |
Msa0836870 | AT3G44480.4 | 39.344 | 122 | 73 | 1 | 671 | 792 | 738 | 858 | 2.67e-15 | 81.3 |
Msa0836870 | AT3G44480.4 | 32.558 | 172 | 101 | 4 | 622 | 786 | 713 | 876 | 2.91e-15 | 81.3 |
Msa0836870 | AT3G44480.1 | 39.344 | 122 | 73 | 1 | 671 | 792 | 738 | 858 | 2.67e-15 | 81.3 |
Msa0836870 | AT3G44480.1 | 32.558 | 172 | 101 | 4 | 622 | 786 | 713 | 876 | 2.91e-15 | 81.3 |
Msa0836870 | AT3G44480.3 | 32.558 | 172 | 101 | 4 | 622 | 786 | 713 | 876 | 3.32e-15 | 80.9 |
Msa0836870 | AT3G44480.3 | 39.344 | 122 | 73 | 1 | 671 | 792 | 738 | 858 | 3.41e-15 | 80.9 |
Msa0836870 | AT3G44480.5 | 32.558 | 172 | 101 | 4 | 622 | 786 | 713 | 876 | 3.32e-15 | 80.9 |
Msa0836870 | AT3G44480.5 | 39.344 | 122 | 73 | 1 | 671 | 792 | 738 | 858 | 3.41e-15 | 80.9 |
Msa0836870 | AT1G10920.1 | 24.697 | 413 | 251 | 19 | 125 | 502 | 4 | 391 | 8.55e-15 | 79.3 |
Msa0836870 | AT1G10920.2 | 24.697 | 413 | 251 | 19 | 125 | 502 | 4 | 391 | 8.55e-15 | 79.3 |
Msa0836870 | AT1G10920.4 | 24.697 | 413 | 251 | 19 | 125 | 502 | 4 | 391 | 8.55e-15 | 79.3 |
Msa0836870 | AT1G63350.3 | 21.004 | 757 | 450 | 27 | 126 | 783 | 126 | 833 | 2.52e-13 | 74.7 |
Msa0836870 | AT1G63350.2 | 21.004 | 757 | 450 | 27 | 126 | 783 | 126 | 833 | 2.52e-13 | 74.7 |
Msa0836870 | AT1G63350.1 | 22.719 | 559 | 346 | 22 | 126 | 645 | 126 | 637 | 2.82e-13 | 74.3 |
Msa0836870 | AT5G05400.1 | 25.352 | 426 | 245 | 18 | 120 | 517 | 116 | 496 | 3.51e-13 | 73.9 |
Msa0836870 | AT5G18350.1 | 23.774 | 673 | 389 | 31 | 161 | 789 | 193 | 785 | 2.43e-12 | 71.6 |
Msa0836870 | AT1G58410.3 | 22.107 | 484 | 317 | 18 | 42 | 504 | 36 | 480 | 3.76e-12 | 70.9 |
Msa0836870 | AT3G25505.1 | 36.066 | 122 | 76 | 2 | 672 | 793 | 427 | 546 | 5.78e-12 | 69.7 |
Msa0836870 | AT5G05400.2 | 25.069 | 363 | 216 | 15 | 175 | 517 | 1 | 327 | 6.74e-12 | 69.7 |
Msa0836870 | AT5G05400.3 | 25.069 | 363 | 216 | 15 | 175 | 517 | 1 | 327 | 6.74e-12 | 69.7 |
Msa0836870 | AT3G46530.1 | 25.000 | 384 | 239 | 15 | 140 | 498 | 142 | 501 | 1.45e-11 | 68.9 |
Msa0836870 | AT2G16870.1 | 35.938 | 128 | 79 | 3 | 656 | 783 | 586 | 710 | 4.02e-11 | 67.4 |
Msa0836870 | AT2G16870.3 | 35.938 | 128 | 79 | 3 | 656 | 783 | 312 | 436 | 5.94e-11 | 67.0 |
Msa0836870 | AT2G16870.2 | 35.938 | 128 | 79 | 3 | 656 | 783 | 312 | 436 | 5.94e-11 | 67.0 |
Msa0836870 | AT1G63360.1 | 24.156 | 385 | 256 | 12 | 123 | 494 | 123 | 484 | 6.10e-11 | 67.0 |
Msa0836870 | AT1G63360.2 | 24.156 | 385 | 256 | 12 | 123 | 494 | 88 | 449 | 6.30e-11 | 66.6 |
Find 171 sgRNAs with CRISPR-Local
Find 300 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTTATTCTGTCATCAATT+TGG | 0.101609 | 5_4:-10575804 | Msa0836870:CDS |
CCTGAAGAGCCTGAATTTAT+TGG | 0.132852 | 5_4:-10579789 | Msa0836870:CDS |
TATTGCGAAGTTGGAGAATT+TGG | 0.183889 | 5_4:-10576011 | Msa0836870:CDS |
ATTGCCAGATTATAAGATTT+TGG | 0.191610 | 5_4:-10578802 | Msa0836870:CDS |
CCCAAATTGATGACAGAATA+AGG | 0.210335 | 5_4:+10575803 | None:intergenic |
TTGGCATGGCATCTGAAATT+TGG | 0.214912 | 5_4:+10576161 | None:intergenic |
GAAGGAGTGCTTCATGGATA+TGG | 0.222755 | 5_4:-10577927 | Msa0836870:CDS |
ATGGTTCCCCTTTGCTTTGA+TGG | 0.230599 | 5_4:+10577023 | None:intergenic |
TATCAAACTTGAAACGAATA+AGG | 0.244623 | 5_4:-10576285 | Msa0836870:CDS |
GGGTTCACCGTTGGCGCTTC+AGG | 0.245903 | 5_4:-10578116 | Msa0836870:CDS |
AAGGTTGCATTTAAAAGATT+TGG | 0.250979 | 5_4:-10578771 | Msa0836870:CDS |
AAGTCGAGAGTAACTTAAAT+TGG | 0.274294 | 5_4:-10575682 | Msa0836870:CDS |
AGGCTGATCATTGACTTAAA+TGG | 0.275030 | 5_4:-10576986 | Msa0836870:CDS |
TTTGGATGCTTTGGCTCCTT+TGG | 0.277628 | 5_4:-10580132 | Msa0836870:CDS |
CCAATAAATTCAGGCTCTTC+AGG | 0.277791 | 5_4:+10579789 | None:intergenic |
ATGCTCAACTCCACTAAATT+TGG | 0.283652 | 5_4:+10576142 | None:intergenic |
CCTTATTCTGTCATCAATTT+GGG | 0.285555 | 5_4:-10575803 | Msa0836870:CDS |
CTTAAAGAGTCGATCCATTC+TGG | 0.291310 | 5_4:-10578035 | Msa0836870:CDS |
TGAAGCTTTGATTGGTATCT+TGG | 0.298518 | 5_4:+10579972 | None:intergenic |
CATAGAAACTTTGGATGCTT+TGG | 0.298828 | 5_4:-10580141 | Msa0836870:CDS |
AGTCTCTCTATCTCTTCTTT+AGG | 0.301438 | 5_4:+10580071 | None:intergenic |
AGCTGATGAAGCTGAGATTC+TGG | 0.307743 | 5_4:-10576440 | Msa0836870:CDS |
TTTGACGAGAATGGTGAATT+CGG | 0.309962 | 5_4:-10579853 | Msa0836870:CDS |
AACCATTTGAACAGAGAAAA+AGG | 0.310594 | 5_4:-10577006 | Msa0836870:CDS |
TTTAAGTTACTCTCGACTTT+AGG | 0.312247 | 5_4:+10575686 | None:intergenic |
AGTTTGATGGGAAACAAATA+AGG | 0.320742 | 5_4:-10579827 | Msa0836870:CDS |
TCAACAAGGCCTTCTGAGTT+AGG | 0.323516 | 5_4:+10578840 | None:intergenic |
ACAGGGATCCTCTGGTCTTC+AGG | 0.327301 | 5_4:+10577896 | None:intergenic |
AGGCATATCTATCTTTAGAT+TGG | 0.328904 | 5_4:+10575706 | None:intergenic |
AGATGCCATGCCAAATTTAG+TGG | 0.337284 | 5_4:-10576152 | Msa0836870:CDS |
TCAAAATTACCGAACGATAT+AGG | 0.337866 | 5_4:-10575884 | Msa0836870:CDS |
ATCTTTAGATTGGGAATGTT+GGG | 0.342320 | 5_4:+10575716 | None:intergenic |
TCATCCAAGACTAATAATAT+TGG | 0.342937 | 5_4:+10578870 | None:intergenic |
TTGGCGCTTCAGGTCATTGC+TGG | 0.343354 | 5_4:-10578106 | Msa0836870:CDS |
ATATCAATGAGGACAGTAAC+AGG | 0.344055 | 5_4:+10577878 | None:intergenic |
GCAGATTCTTCATTCTGTAT+AGG | 0.346253 | 5_4:+10576239 | None:intergenic |
ATGAAGAAGGTGCTGCATTA+TGG | 0.349783 | 5_4:-10575748 | Msa0836870:CDS |
TATTAGTCTTGGATGATGTT+TGG | 0.361877 | 5_4:-10578863 | Msa0836870:CDS |
TATGACATTAATCAAATTCC+TGG | 0.377009 | 5_4:+10577787 | None:intergenic |
GAAGCAATACCTTTGATTTG+TGG | 0.382238 | 5_4:+10579645 | None:intergenic |
TTGACTGGTTTGGGTGGATC+TGG | 0.382247 | 5_4:-10579702 | Msa0836870:CDS |
ATTTGAATATTGCGGACTTC+CGG | 0.383071 | 5_4:-10578964 | Msa0836870:CDS |
TGAAGCAAGCATAGAAACTT+TGG | 0.388741 | 5_4:-10580150 | Msa0836870:CDS |
AGTAACTTAAATTGGCTTCA+TGG | 0.390369 | 5_4:-10575674 | Msa0836870:CDS |
GGCATATCTATCTTTAGATT+GGG | 0.391044 | 5_4:+10575707 | None:intergenic |
CGAGACAACATAGCTTGTTT+AGG | 0.395107 | 5_4:+10575930 | None:intergenic |
TTGACGAGAATGGTGAATTC+GGG | 0.395499 | 5_4:-10579852 | Msa0836870:CDS |
GTGAATTCGGGTCAGTTTGA+TGG | 0.398685 | 5_4:-10579840 | Msa0836870:CDS |
TCAACAAAGTTTGGATATGT+TGG | 0.403522 | 5_4:-10577963 | Msa0836870:CDS |
GTCACCAAAATCTTATAATC+TGG | 0.405770 | 5_4:+10578798 | None:intergenic |
TTCAAGTCACCTATATCGTT+CGG | 0.412410 | 5_4:+10575875 | None:intergenic |
GTAACCAAGTTTGAGCTACT+TGG | 0.415943 | 5_4:-10576313 | Msa0836870:CDS |
CAAGGAGAAGGAGTGCTTCA+TGG | 0.422137 | 5_4:-10577933 | Msa0836870:CDS |
GTCATTGCTGGATCACTTTG+TGG | 0.422751 | 5_4:-10578094 | Msa0836870:CDS |
ATTTCTTCCCACTTCTCAAA+AGG | 0.424179 | 5_4:+10578067 | None:intergenic |
GTCTGACAAGTACTCATTAC+CGG | 0.428227 | 5_4:-10576404 | Msa0836870:CDS |
TATCTTTAGATTGGGAATGT+TGG | 0.428396 | 5_4:+10575715 | None:intergenic |
CTCTTGTATTGCACATATGA+AGG | 0.437930 | 5_4:+10576206 | None:intergenic |
CGCATATTGTCTATAACAAC+CGG | 0.441316 | 5_4:-10576851 | Msa0836870:intron |
TGAAGAAGGTGCTGCATTAT+GGG | 0.441939 | 5_4:-10575747 | Msa0836870:CDS |
GAGATGTCAGAATCTGTTGC+AGG | 0.443944 | 5_4:-10575953 | Msa0836870:CDS |
GCCTCAAGATATTGCGAAGT+TGG | 0.445300 | 5_4:-10576020 | Msa0836870:CDS |
CTGAATCAGCAAGGAATCAT+TGG | 0.445602 | 5_4:-10576935 | Msa0836870:CDS |
ATATCCAATATTATTAGTCT+TGG | 0.450715 | 5_4:-10578874 | Msa0836870:CDS |
ACAGATAGTGAGAGGTTGTA+AGG | 0.454987 | 5_4:-10578137 | Msa0836870:intron |
CATCTCTTCTAAATCAGAAC+AGG | 0.457520 | 5_4:+10575970 | None:intergenic |
TAGAGACTCTCTTAAGAGAA+TGG | 0.457863 | 5_4:-10580049 | Msa0836870:CDS |
TGAGAAGTGGGAAGAAATGA+AGG | 0.459871 | 5_4:-10578062 | Msa0836870:CDS |
AGGTGCAGTTGGAGCTGGAA+TGG | 0.463854 | 5_4:-10580234 | Msa0836870:CDS |
GGATATGTTGGAGGATATCA+AGG | 0.465353 | 5_4:-10577951 | Msa0836870:CDS |
TCATCCATTCCAATAAATTC+AGG | 0.468890 | 5_4:+10579780 | None:intergenic |
AAACAAATAAGGGGTTTGTC+TGG | 0.472151 | 5_4:-10579816 | Msa0836870:CDS |
TCTTCGTCGTTTATAAAGTC+AGG | 0.472526 | 5_4:+10578939 | None:intergenic |
TTCAGTCCAATCCACCAATC+AGG | 0.473840 | 5_4:+10576953 | None:intergenic |
CCCTTGCTAAGAAGCTCTGT+TGG | 0.474014 | 5_4:-10579671 | Msa0836870:CDS |
ACTCGTCCTGATTGGTGGAT+TGG | 0.479980 | 5_4:-10576959 | Msa0836870:CDS |
GTTTGATGGGAAACAAATAA+GGG | 0.486242 | 5_4:-10579826 | Msa0836870:CDS |
TCAAACTTCAACTTATTCAA+AGG | 0.487824 | 5_4:+10579756 | None:intergenic |
GATCATGCAGCATGATATAG+TGG | 0.490009 | 5_4:+10577065 | None:intergenic |
AGAGACTCTCTTAAGAGAAT+GGG | 0.492562 | 5_4:-10580048 | Msa0836870:CDS |
AAGGAGTGCTTCATGGATAT+GGG | 0.493997 | 5_4:-10577926 | Msa0836870:CDS |
TCATTGCTGGATCACTTTGT+GGG | 0.494287 | 5_4:-10578093 | Msa0836870:CDS |
TAGCAATCCATCAAAGCAAA+GGG | 0.495825 | 5_4:-10577030 | Msa0836870:CDS |
CTCATTCATTGCCGGAATGT+TGG | 0.495961 | 5_4:-10576903 | Msa0836870:CDS |
AGAACCAAGTAGCTCAAACT+TGG | 0.496884 | 5_4:+10576309 | None:intergenic |
CGTATGTACTCATTCATTGC+CGG | 0.496969 | 5_4:-10576911 | Msa0836870:CDS |
GCTTGAGAAGTTCTACATGA+AGG | 0.499383 | 5_4:-10575849 | Msa0836870:CDS |
GAATGATGTCAATCATTTGT+CGG | 0.502536 | 5_4:-10580099 | Msa0836870:CDS |
GTTGCTTGTGAAGCTTTGAT+TGG | 0.504423 | 5_4:+10579964 | None:intergenic |
AAACTTGAAACGAATAAGGT+TGG | 0.504717 | 5_4:-10576281 | Msa0836870:CDS |
AATTCCTGGTGATTAAATCA+TGG | 0.505260 | 5_4:+10577801 | None:intergenic |
ACAAAGTTTGGATATGTTGG+AGG | 0.505412 | 5_4:-10577960 | Msa0836870:CDS |
TGAATTCGGGTCAGTTTGAT+GGG | 0.506314 | 5_4:-10579839 | Msa0836870:CDS |
AGTGGAGGTGCAGTTGGAGC+TGG | 0.508333 | 5_4:-10580239 | Msa0836870:CDS |
GGACAGTAACAGGGATCCTC+TGG | 0.510097 | 5_4:+10577888 | None:intergenic |
ATGGAGATACTCGTCCTGAT+TGG | 0.512333 | 5_4:-10576967 | Msa0836870:CDS |
GAAGTTTGAATTGATGAAGA+AGG | 0.515943 | 5_4:-10579742 | Msa0836870:CDS |
TTCTATGCTTGCTTCAAGAG+TGG | 0.516802 | 5_4:+10580157 | None:intergenic |
TTACTGTCCTCATTGATATG+TGG | 0.519195 | 5_4:-10577874 | Msa0836870:CDS |
GCCTCAGCAGAGTTCCCAAT+CGG | 0.519537 | 5_4:+10578907 | None:intergenic |
TTCTTCATTCTGTATAGGCA+AGG | 0.521341 | 5_4:+10576244 | None:intergenic |
GATTCAATTGAGAAAAGTGA+TGG | 0.521448 | 5_4:+10578697 | None:intergenic |
TTTGATGAAGCTGAGGGATA+AGG | 0.522626 | 5_4:-10579886 | Msa0836870:CDS |
GAGATACTCGTCCTGATTGG+TGG | 0.523039 | 5_4:-10576964 | Msa0836870:CDS |
ATTTGGCACCCCATGGCAGT+TGG | 0.523114 | 5_4:-10578754 | Msa0836870:CDS |
TACTGTCCTCATTGATATGT+GGG | 0.524451 | 5_4:-10577873 | Msa0836870:CDS |
TGGAGAATTTGGAAGTGCTA+AGG | 0.526453 | 5_4:-10576000 | Msa0836870:CDS |
GGTGCAGTTGGAGCTGGAAT+GGG | 0.526842 | 5_4:-10580233 | Msa0836870:CDS |
CTATTGAGTGGAGGTGCAGT+TGG | 0.528155 | 5_4:-10580245 | Msa0836870:CDS |
CTTGAGAAGTTCTACATGAA+GGG | 0.528470 | 5_4:-10575848 | Msa0836870:CDS |
GTAATGTTGCAAAATCCATC+AGG | 0.530875 | 5_4:+10576091 | None:intergenic |
GGTAAAACAGAGACAGCTAA+AGG | 0.534072 | 5_4:-10576882 | Msa0836870:CDS |
CATGGCATCTGAAATTTGGA+TGG | 0.541519 | 5_4:+10576165 | None:intergenic |
TCCAACAGAGCTTCTTAGCA+AGG | 0.542977 | 5_4:+10579670 | None:intergenic |
GTTGGAGGATATCAAGGAGA+AGG | 0.547688 | 5_4:-10577945 | Msa0836870:CDS |
CGAAGATGCAGTTAACCGAT+TGG | 0.548815 | 5_4:-10578922 | Msa0836870:CDS |
GATTTGATTAAATTGCCTGA+TGG | 0.553572 | 5_4:-10576106 | Msa0836870:CDS |
GGAACTCTGCTGAGGCAAGT+TGG | 0.555133 | 5_4:-10578900 | Msa0836870:CDS |
AGAGCCTGAATTTATTGGAA+TGG | 0.557382 | 5_4:-10579784 | Msa0836870:CDS |
AAGTTTGAATTGATGAAGAA+GGG | 0.558781 | 5_4:-10579741 | Msa0836870:CDS |
TCTTCATTCTGTATAGGCAA+GGG | 0.560729 | 5_4:+10576245 | None:intergenic |
TCAAGTGGATCCAACTGCCA+TGG | 0.565407 | 5_4:+10578744 | None:intergenic |
CAAGTGGATCCAACTGCCAT+GGG | 0.566582 | 5_4:+10578745 | None:intergenic |
GAAGATGCAGTTAACCGATT+GGG | 0.567320 | 5_4:-10578921 | Msa0836870:CDS |
TGATTAATGTCATAGCTACA+AGG | 0.569379 | 5_4:-10577778 | Msa0836870:intron |
GAGGCATTGCAGAAAGCTTG+TGG | 0.571568 | 5_4:+10576038 | None:intergenic |
CTAGCAATCCATCAAAGCAA+AGG | 0.580372 | 5_4:-10577031 | Msa0836870:CDS |
TCCAACTTCGCAATATCTTG+AGG | 0.586766 | 5_4:+10576019 | None:intergenic |
TCGTTTATAAAGTCAGGCAC+CGG | 0.588941 | 5_4:+10578945 | None:intergenic |
GCAATGACCTGAAGCGCCAA+CGG | 0.592281 | 5_4:+10578109 | None:intergenic |
TGTTGGAATCCACAAATCAA+AGG | 0.593834 | 5_4:-10579654 | Msa0836870:intron |
AAACTGATTTGATGAAGCTG+AGG | 0.594787 | 5_4:-10579893 | Msa0836870:CDS |
TCTTGTATTGCACATATGAA+GGG | 0.595744 | 5_4:+10576207 | None:intergenic |
AGGTTGTAAGGGTTCACCGT+TGG | 0.597298 | 5_4:-10578125 | Msa0836870:CDS |
TCATTCATCTCTTTAACCAA+AGG | 0.597848 | 5_4:+10580116 | None:intergenic |
AAGACACTATTTGAATATTG+CGG | 0.598152 | 5_4:-10578972 | Msa0836870:CDS |
CAGATAGTGAGAGGTTGTAA+GGG | 0.598442 | 5_4:-10578136 | Msa0836870:CDS |
TTGCATGACCTAGATGAAGA+TGG | 0.598595 | 5_4:-10577845 | Msa0836870:CDS |
CAACTCCACTAAATTTGGCA+TGG | 0.604033 | 5_4:+10576147 | None:intergenic |
ATAGCTATTAGACTCCAGAA+TGG | 0.604057 | 5_4:+10578021 | None:intergenic |
GATGTTTGGCCTAACTCAGA+AGG | 0.604595 | 5_4:-10578849 | Msa0836870:CDS |
GATGAAGCTGAGGGATAAGG+TGG | 0.605087 | 5_4:-10579883 | Msa0836870:CDS |
CAAGATGGGAGTTTCAGAGA+CGG | 0.608921 | 5_4:+10579007 | None:intergenic |
TTGTCCATGATTTAATCACC+AGG | 0.609698 | 5_4:-10577805 | Msa0836870:CDS |
CGGTTGTTATAGACAATATG+CGG | 0.611355 | 5_4:+10576852 | None:intergenic |
AACTGATTTGATGAAGCTGA+GGG | 0.612688 | 5_4:-10579892 | Msa0836870:CDS |
TGAATTTGAACTTCTCAACA+AGG | 0.613138 | 5_4:+10578826 | None:intergenic |
TGAAGATGGTACAAAAGCAA+TGG | 0.613750 | 5_4:-10577831 | Msa0836870:CDS |
CCAACAGAGCTTCTTAGCAA+GGG | 0.615668 | 5_4:+10579671 | None:intergenic |
TTAAAAGATTTGGCACCCCA+TGG | 0.619314 | 5_4:-10578761 | Msa0836870:CDS |
TTCTATGCACAGATAGTGAG+AGG | 0.624461 | 5_4:-10578145 | Msa0836870:intron |
TTTGATGGGAAACAAATAAG+GGG | 0.625408 | 5_4:-10579825 | Msa0836870:CDS |
ACTTGGTTACTTCAGAACGA+TGG | 0.625421 | 5_4:+10576326 | None:intergenic |
TGATGGAAAAGAGACACAGC+AGG | 0.626121 | 5_4:+10578714 | None:intergenic |
ACAGCAGGATCATGATCAAG+TGG | 0.629990 | 5_4:+10578729 | None:intergenic |
GATGGATTGCTAGTTCTCTG+AGG | 0.635379 | 5_4:+10577041 | None:intergenic |
GGTTGTTATAGACAATATGC+GGG | 0.636103 | 5_4:+10576853 | None:intergenic |
GGTGATTAAATCATGGACAA+TGG | 0.639740 | 5_4:+10577808 | None:intergenic |
ACCGATTGGGAACTCTGCTG+AGG | 0.652901 | 5_4:-10578908 | Msa0836870:CDS |
GTTATGGCGGATCTATTGAG+TGG | 0.659695 | 5_4:-10580257 | Msa0836870:CDS |
TTGTTGAAGATAAAAGAGCA+AGG | 0.662967 | 5_4:+10577979 | None:intergenic |
GACTATTTCCTGAAGACCAG+AGG | 0.666062 | 5_4:-10577904 | Msa0836870:CDS |
CTCAAGTTGAACATTAACAG+AGG | 0.673001 | 5_4:+10579920 | None:intergenic |
TGGATTGGACTGAATCAGCA+AGG | 0.677789 | 5_4:-10576944 | Msa0836870:CDS |
ATGGCGGATCTATTGAGTGG+AGG | 0.682569 | 5_4:-10580254 | Msa0836870:CDS |
TATCAATGAGGACAGTAACA+GGG | 0.685421 | 5_4:+10577879 | None:intergenic |
CATGTGATCTGTGATGAAGA+AGG | 0.686648 | 5_4:-10575761 | Msa0836870:CDS |
GATACTGATCTTCTTCAATG+TGG | 0.700626 | 5_4:+10576069 | None:intergenic |
ATTCTGCCCACATATCAATG+AGG | 0.709320 | 5_4:+10577867 | None:intergenic |
AGCAATCCATCAAAGCAAAG+GGG | 0.736257 | 5_4:-10577029 | Msa0836870:CDS |
AAGTGGATCCAACTGCCATG+GGG | 0.738041 | 5_4:+10578746 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TGAAATGAAATAAAATTGTA+TGG | + | chr5_4:10576751-10576770 | None:intergenic | 15.0% |
!! | TTTAAATCAAAAAAGATTCA+GGG | + | chr5_4:10578245-10578264 | None:intergenic | 15.0% |
!! | ATTTAAATCAAAAAAGATTC+AGG | + | chr5_4:10578246-10578265 | None:intergenic | 15.0% |
!!! | TTATTTTGTAATGTTATCAT+TGG | + | chr5_4:10579093-10579112 | None:intergenic | 15.0% |
!!! | TACAAAATAATTGTCATTTA+AGG | + | chr5_4:10579312-10579331 | None:intergenic | 15.0% |
!! | GCTATTCAAACAATAAAAAA+GGG | - | chr5_4:10575691-10575710 | Msa0836870:CDS | 20.0% |
!! | TTAAATTGTTTATCCAAACA+AGG | - | chr5_4:10576480-10576499 | Msa0836870:intron | 20.0% |
!! | TATATTGAAATGAAGTCAAA+TGG | + | chr5_4:10576781-10576800 | None:intergenic | 20.0% |
!!! | TTTACAATGTTTTTCAAGAT+GGG | + | chr5_4:10576895-10576914 | None:intergenic | 20.0% |
!!! | ATATCCAATATTATTAGTCT+TGG | - | chr5_4:10577011-10577030 | Msa0836870:CDS | 20.0% |
!! | TTATGTTAAATCTTCTACTA+TGG | - | chr5_4:10577334-10577353 | Msa0836870:intron | 20.0% |
!! | TATGTTAAATCTTCTACTAT+GGG | - | chr5_4:10577335-10577354 | Msa0836870:intron | 20.0% |
!! | TTAAATCAAAAAAGATTCAG+GGG | + | chr5_4:10578244-10578263 | None:intergenic | 20.0% |
!! | TCTTTGTCAACTTATTTAAA+AGG | - | chr5_4:10578500-10578519 | Msa0836870:intron | 20.0% |
!! | TTACATAATCGTGAAATAAT+TGG | + | chr5_4:10579134-10579153 | None:intergenic | 20.0% |
!!! | ACTTAATAGAAAGCATTAAA+AGG | - | chr5_4:10579203-10579222 | Msa0836870:intron | 20.0% |
!! | TTAAAAGGTAAGAATAAAGT+TGG | - | chr5_4:10579218-10579237 | Msa0836870:intron | 20.0% |
!! | TAAAGTTGGATAAAACTAAA+AGG | - | chr5_4:10579232-10579251 | Msa0836870:intron | 20.0% |
! | CGCTATTCAAACAATAAAAA+AGG | - | chr5_4:10575690-10575709 | Msa0836870:CDS | 25.0% |
! | TCAAACTTCAACTTATTCAA+AGG | + | chr5_4:10576132-10576151 | None:intergenic | 25.0% |
! | AAGTTTGAATTGATGAAGAA+GGG | - | chr5_4:10576144-10576163 | Msa0836870:CDS | 25.0% |
!!! | ACATGCATTTAATTTGAAAC+AGG | - | chr5_4:10576551-10576570 | Msa0836870:intron | 25.0% |
! | CTTTATGTAGTTTCATTCTA+TGG | - | chr5_4:10576645-10576664 | Msa0836870:intron | 25.0% |
!!! | TTTTTTACTCCTCTCATTTT+AGG | - | chr5_4:10576672-10576691 | Msa0836870:intron | 25.0% |
! | AAAACCAATTTCATCTCATT+TGG | - | chr5_4:10576705-10576724 | Msa0836870:intron | 25.0% |
!!! | AAAGCTGTTTTGTTTTGAAT+AGG | - | chr5_4:10576826-10576845 | Msa0836870:intron | 25.0% |
!!! | CTTTACAATGTTTTTCAAGA+TGG | + | chr5_4:10576896-10576915 | None:intergenic | 25.0% |
! | AAGACACTATTTGAATATTG+CGG | - | chr5_4:10576913-10576932 | Msa0836870:CDS | 25.0% |
! | TCATCCAAGACTAATAATAT+TGG | + | chr5_4:10577018-10577037 | None:intergenic | 25.0% |
!! | ATTGCCAGATTATAAGATTT+TGG | - | chr5_4:10577083-10577102 | Msa0836870:CDS | 25.0% |
! | AAGGTTGCATTTAAAAGATT+TGG | - | chr5_4:10577114-10577133 | Msa0836870:intron | 25.0% |
!! | TCATCAACAAGATTTTTATC+AGG | + | chr5_4:10577231-10577250 | None:intergenic | 25.0% |
! | TGATAAAAATCTTGTTGATG+AGG | - | chr5_4:10577230-10577249 | Msa0836870:intron | 25.0% |
! | ACTTAATTGAACTTATCTAC+TGG | + | chr5_4:10577640-10577659 | None:intergenic | 25.0% |
! | ATGCAATTGTATACTAACAA+GGG | + | chr5_4:10577676-10577695 | None:intergenic | 25.0% |
! | TATGCAATTGTATACTAACA+AGG | + | chr5_4:10577677-10577696 | None:intergenic | 25.0% |
!! | CTTTTATCTTCAACAAAGTT+TGG | - | chr5_4:10577913-10577932 | Msa0836870:CDS | 25.0% |
! | TATGACATTAATCAAATTCC+TGG | + | chr5_4:10578101-10578120 | None:intergenic | 25.0% |
! | ATAAAGAAGTAAAGAATGCA+TGG | - | chr5_4:10578643-10578662 | Msa0836870:intron | 25.0% |
! | GATTAAATTATTCGTCTTGT+TGG | - | chr5_4:10578716-10578735 | Msa0836870:CDS | 25.0% |
! | ATTTAGACATAGAAACATAC+CGG | + | chr5_4:10579056-10579075 | None:intergenic | 25.0% |
!!! | TTCTGAAGTGACAAATAATT+TGG | - | chr5_4:10579275-10579294 | Msa0836870:intron | 25.0% |
!!! | TGACAATTATTTTGTAACAG+AGG | - | chr5_4:10579316-10579335 | Msa0836870:intron | 25.0% |
!!! | GACAATTATTTTGTAACAGA+GGG | - | chr5_4:10579317-10579336 | Msa0836870:intron | 25.0% |
!! | TACAGATGAAACATTTTCTT+CGG | - | chr5_4:10579406-10579425 | Msa0836870:intron | 25.0% |
!!! | AGATTCTGGTTTTAAATCTT+CGG | - | chr5_4:10579459-10579478 | Msa0836870:intron | 25.0% |
!!! | GTTTTGATAGTCACAAATTA+TGG | - | chr5_4:10579533-10579552 | Msa0836870:intron | 25.0% |
! | TATCAAACTTGAAACGAATA+AGG | - | chr5_4:10579600-10579619 | Msa0836870:intron | 25.0% |
ATAAAAAAGGGTCGAGAATT+TGG | - | chr5_4:10575703-10575722 | Msa0836870:CDS | 30.0% | |
TCATTCATCTCTTTAACCAA+AGG | + | chr5_4:10575772-10575791 | None:intergenic | 30.0% | |
GAATGATGTCAATCATTTGT+CGG | - | chr5_4:10575786-10575805 | Msa0836870:CDS | 30.0% | |
CAAAAAGCAATAAGCTTACT+TGG | - | chr5_4:10575872-10575891 | Msa0836870:CDS | 30.0% | |
AGTTTGATGGGAAACAAATA+AGG | - | chr5_4:10576058-10576077 | Msa0836870:CDS | 30.0% | |
GTTTGATGGGAAACAAATAA+GGG | - | chr5_4:10576059-10576078 | Msa0836870:CDS | 30.0% | |
TTTGATGGGAAACAAATAAG+GGG | - | chr5_4:10576060-10576079 | Msa0836870:CDS | 30.0% | |
TCATCCATTCCAATAAATTC+AGG | + | chr5_4:10576108-10576127 | None:intergenic | 30.0% | |
GAAGTTTGAATTGATGAAGA+AGG | - | chr5_4:10576143-10576162 | Msa0836870:CDS | 30.0% | |
AAATTATCATAGAGAGCTCA+TGG | + | chr5_4:10576384-10576403 | None:intergenic | 30.0% | |
GATAATCCATCCATAACATA+AGG | + | chr5_4:10576584-10576603 | None:intergenic | 30.0% | |
! | AACTGACTTCTAATTGAGAT+TGG | - | chr5_4:10576606-10576625 | Msa0836870:intron | 30.0% |
AATGCCAAATGAGATGAAAT+TGG | + | chr5_4:10576712-10576731 | None:intergenic | 30.0% | |
CAAAACAGCTTTCTAAATCA+AGG | + | chr5_4:10576818-10576837 | None:intergenic | 30.0% | |
!!! | TTGTTTTGAATAGGCAAGTT+TGG | - | chr5_4:10576835-10576854 | Msa0836870:intron | 30.0% |
!! | TATTAGTCTTGGATGATGTT+TGG | - | chr5_4:10577022-10577041 | Msa0836870:CDS | 30.0% |
TGAATTTGAACTTCTCAACA+AGG | + | chr5_4:10577062-10577081 | None:intergenic | 30.0% | |
GTCACCAAAATCTTATAATC+TGG | + | chr5_4:10577090-10577109 | None:intergenic | 30.0% | |
!! | TAAGATTTTGGTGACTTCAA+AGG | - | chr5_4:10577095-10577114 | Msa0836870:CDS | 30.0% |
GATTCAATTGAGAAAAGTGA+TGG | + | chr5_4:10577191-10577210 | None:intergenic | 30.0% | |
TGGTGCAATCAAAATTTAGA+TGG | + | chr5_4:10577274-10577293 | None:intergenic | 30.0% | |
AGTAAGTTGTTTATCCAAAC+AGG | + | chr5_4:10577425-10577444 | None:intergenic | 30.0% | |
!!! | AATTACTTTTGAGACTGCTT+GGG | + | chr5_4:10577614-10577633 | None:intergenic | 30.0% |
!!! | TAATTACTTTTGAGACTGCT+TGG | + | chr5_4:10577615-10577634 | None:intergenic | 30.0% |
TATACTAACAAGGGACTATT+TGG | + | chr5_4:10577667-10577686 | None:intergenic | 30.0% | |
AAATCAGTGAGTAACATCAA+AGG | + | chr5_4:10577717-10577736 | None:intergenic | 30.0% | |
TTGTTGAAGATAAAAGAGCA+AGG | + | chr5_4:10577909-10577928 | None:intergenic | 30.0% | |
TCAACAAAGTTTGGATATGT+TGG | - | chr5_4:10577922-10577941 | Msa0836870:CDS | 30.0% | |
AATTCCTGGTGATTAAATCA+TGG | + | chr5_4:10578087-10578106 | None:intergenic | 30.0% | |
TGATTAATGTCATAGCTACA+AGG | - | chr5_4:10578107-10578126 | Msa0836870:CDS | 30.0% | |
!! | TTCAGGGGCATAAAAATTTT+GGG | + | chr5_4:10578229-10578248 | None:intergenic | 30.0% |
!! | ATTCAGGGGCATAAAAATTT+TGG | + | chr5_4:10578230-10578249 | None:intergenic | 30.0% |
CGTTTAAACATTGAAATGGA+AGG | + | chr5_4:10578399-10578418 | None:intergenic | 30.0% | |
TCAGCGTTTAAACATTGAAA+TGG | + | chr5_4:10578403-10578422 | None:intergenic | 30.0% | |
CCTAAAACGAATTTGAATTG+AGG | + | chr5_4:10578526-10578545 | None:intergenic | 30.0% | |
! | CCTCAATTCAAATTCGTTTT+AGG | - | chr5_4:10578523-10578542 | Msa0836870:intron | 30.0% |
AAGCATAATTTAGGAACTGA+GGG | + | chr5_4:10578755-10578774 | None:intergenic | 30.0% | |
CTGTACAACAAGCATAATTT+AGG | + | chr5_4:10578764-10578783 | None:intergenic | 30.0% | |
!! | CTAAATTATGCTTGTTGTAC+AGG | - | chr5_4:10578762-10578781 | Msa0836870:CDS | 30.0% |
AACCATTTGAACAGAGAAAA+AGG | - | chr5_4:10578879-10578898 | Msa0836870:CDS | 30.0% | |
ATGCTTTCTATTAAGTGAGA+TGG | + | chr5_4:10579199-10579218 | None:intergenic | 30.0% | |
! | ATGAAACATTTTCTTCGGAT+TGG | - | chr5_4:10579411-10579430 | Msa0836870:intron | 30.0% |
!! | TTTCAGTTTGCTCATTTTGT+CGG | + | chr5_4:10579513-10579532 | None:intergenic | 30.0% |
AAACTTGAAACGAATAAGGT+TGG | - | chr5_4:10579604-10579623 | Msa0836870:intron | 30.0% | |
TCTTGTATTGCACATATGAA+GGG | + | chr5_4:10579681-10579700 | None:intergenic | 30.0% | |
GATTTGATTAAATTGCCTGA+TGG | - | chr5_4:10579779-10579798 | Msa0836870:CDS | 30.0% | |
TCAAAATTACCGAACGATAT+AGG | - | chr5_4:10580001-10580020 | Msa0836870:CDS | 30.0% | |
TCCTTATTCTGTCATCAATT+TGG | - | chr5_4:10580081-10580100 | Msa0836870:CDS | 30.0% | |
CCTTATTCTGTCATCAATTT+GGG | - | chr5_4:10580082-10580101 | Msa0836870:CDS | 30.0% | |
ATCTTTAGATTGGGAATGTT+GGG | + | chr5_4:10580172-10580191 | None:intergenic | 30.0% | |
TATCTTTAGATTGGGAATGT+TGG | + | chr5_4:10580173-10580192 | None:intergenic | 30.0% | |
GGCATATCTATCTTTAGATT+GGG | + | chr5_4:10580181-10580200 | None:intergenic | 30.0% | |
AGGCATATCTATCTTTAGAT+TGG | + | chr5_4:10580182-10580201 | None:intergenic | 30.0% | |
! | TTTAAGTTACTCTCGACTTT+AGG | + | chr5_4:10580202-10580221 | None:intergenic | 30.0% |
AAGTCGAGAGTAACTTAAAT+TGG | - | chr5_4:10580203-10580222 | Msa0836870:CDS | 30.0% | |
! | AGTAACTTAAATTGGCTTCA+TGG | - | chr5_4:10580211-10580230 | Msa0836870:CDS | 30.0% |
TGAAGCAAGCATAGAAACTT+TGG | - | chr5_4:10575735-10575754 | Msa0836870:CDS | 35.0% | |
CATAGAAACTTTGGATGCTT+TGG | - | chr5_4:10575744-10575763 | Msa0836870:CDS | 35.0% | |
AGTCTCTCTATCTCTTCTTT+AGG | + | chr5_4:10575817-10575836 | None:intergenic | 35.0% | |
TAGAGACTCTCTTAAGAGAA+TGG | - | chr5_4:10575836-10575855 | Msa0836870:CDS | 35.0% | |
AGAGACTCTCTTAAGAGAAT+GGG | - | chr5_4:10575837-10575856 | Msa0836870:CDS | 35.0% | |
! | TGAAGCTTTGATTGGTATCT+TGG | + | chr5_4:10575916-10575935 | None:intergenic | 35.0% |
!! | CTCAAGTTGAACATTAACAG+AGG | + | chr5_4:10575968-10575987 | None:intergenic | 35.0% |
!! | AAACTGATTTGATGAAGCTG+AGG | - | chr5_4:10575992-10576011 | Msa0836870:CDS | 35.0% |
!! | AACTGATTTGATGAAGCTGA+GGG | - | chr5_4:10575993-10576012 | Msa0836870:CDS | 35.0% |
!! | GGATGAAATTTTGACGAGAA+TGG | - | chr5_4:10576023-10576042 | Msa0836870:CDS | 35.0% |
TTTGACGAGAATGGTGAATT+CGG | - | chr5_4:10576032-10576051 | Msa0836870:CDS | 35.0% | |
AAACAAATAAGGGGTTTGTC+TGG | - | chr5_4:10576069-10576088 | Msa0836870:CDS | 35.0% | |
AGAGCCTGAATTTATTGGAA+TGG | - | chr5_4:10576101-10576120 | Msa0836870:CDS | 35.0% | |
!!! | TGTACTTGTTTTGACTGGTT+TGG | - | chr5_4:10576173-10576192 | Msa0836870:CDS | 35.0% |
!!! | GTACTTGTTTTGACTGGTTT+GGG | - | chr5_4:10576174-10576193 | Msa0836870:CDS | 35.0% |
TGTTGGAATCCACAAATCAA+AGG | - | chr5_4:10576231-10576250 | Msa0836870:CDS | 35.0% | |
!! | GAAGCAATACCTTTGATTTG+TGG | + | chr5_4:10576243-10576262 | None:intergenic | 35.0% |
CTTGGGAGAACTTATAGAAA+TGG | - | chr5_4:10576326-10576345 | Msa0836870:CDS | 35.0% | |
TCTCATACACCTAAAATGAG+AGG | + | chr5_4:10576684-10576703 | None:intergenic | 35.0% | |
GCTTTCTAAATCAAGGAGAA+TGG | + | chr5_4:10576811-10576830 | None:intergenic | 35.0% | |
! | TTTTGAATAGGCAAGTTTGG+TGG | - | chr5_4:10576838-10576857 | Msa0836870:intron | 35.0% |
ATTTGAATATTGCGGACTTC+CGG | - | chr5_4:10576921-10576940 | Msa0836870:CDS | 35.0% | |
TCTTCGTCGTTTATAAAGTC+AGG | + | chr5_4:10576949-10576968 | None:intergenic | 35.0% | |
ACTTACATGATAAGCGCTTA+TGG | + | chr5_4:10577467-10577486 | None:intergenic | 35.0% | |
GTGAGTAACATCAAAGGTTT+GGG | + | chr5_4:10577711-10577730 | None:intergenic | 35.0% | |
AGTGAGTAACATCAAAGGTT+TGG | + | chr5_4:10577712-10577731 | None:intergenic | 35.0% | |
ATTTCTTCCCACTTCTCAAA+AGG | + | chr5_4:10577821-10577840 | None:intergenic | 35.0% | |
ATAGCTATTAGACTCCAGAA+TGG | + | chr5_4:10577867-10577886 | None:intergenic | 35.0% | |
ACAAAGTTTGGATATGTTGG+AGG | - | chr5_4:10577925-10577944 | Msa0836870:CDS | 35.0% | |
TATCAATGAGGACAGTAACA+GGG | + | chr5_4:10578009-10578028 | None:intergenic | 35.0% | |
ATATCAATGAGGACAGTAAC+AGG | + | chr5_4:10578010-10578029 | None:intergenic | 35.0% | |
TTACTGTCCTCATTGATATG+TGG | - | chr5_4:10578011-10578030 | Msa0836870:CDS | 35.0% | |
TACTGTCCTCATTGATATGT+GGG | - | chr5_4:10578012-10578031 | Msa0836870:CDS | 35.0% | |
! | CTTTTGTACCATCTTCATCT+AGG | + | chr5_4:10578051-10578070 | None:intergenic | 35.0% |
TGAAGATGGTACAAAAGCAA+TGG | - | chr5_4:10578054-10578073 | Msa0836870:CDS | 35.0% | |
GGTGATTAAATCATGGACAA+TGG | + | chr5_4:10578080-10578099 | None:intergenic | 35.0% | |
TTGTCCATGATTTAATCACC+AGG | - | chr5_4:10578080-10578099 | Msa0836870:CDS | 35.0% | |
! | AAACATTTTTGCGTGTAGCT+TGG | - | chr5_4:10578290-10578309 | Msa0836870:intron | 35.0% |
TGTAGTTCATGTTGCAAGTT+TGG | - | chr5_4:10578334-10578353 | Msa0836870:intron | 35.0% | |
! | CTAAATACAAGTATCGCTCA+CGG | + | chr5_4:10578426-10578445 | None:intergenic | 35.0% |
! | TTTTAGGCCTACATATGCAT+TGG | - | chr5_4:10578539-10578558 | Msa0836870:intron | 35.0% |
TTTAGGCCTACATATGCATT+GGG | - | chr5_4:10578540-10578559 | Msa0836870:intron | 35.0% | |
AAATTGCATCCTTCCTGAAA+TGG | + | chr5_4:10578581-10578600 | None:intergenic | 35.0% | |
AATGCATTGTCTCATGAGTT+AGG | - | chr5_4:10578603-10578622 | Msa0836870:intron | 35.0% | |
!! | TATTCGTCTTGTTGGTGATT+TGG | - | chr5_4:10578724-10578743 | Msa0836870:CDS | 35.0% |
CAAGCATAATTTAGGAACTG+AGG | + | chr5_4:10578756-10578775 | None:intergenic | 35.0% | |
TAGCAATCCATCAAAGCAAA+GGG | - | chr5_4:10578855-10578874 | Msa0836870:CDS | 35.0% | |
! | AGCCTTTTTCTCTGTTCAAA+TGG | + | chr5_4:10578884-10578903 | None:intergenic | 35.0% |
!! | AGGCTGATCATTGACTTAAA+TGG | - | chr5_4:10578899-10578918 | Msa0836870:CDS | 35.0% |
! | TCTCTGTTTTACCAACATTC+CGG | + | chr5_4:10578996-10579015 | None:intergenic | 35.0% |
GGTTGTTATAGACAATATGC+GGG | + | chr5_4:10579035-10579054 | None:intergenic | 35.0% | |
CGGTTGTTATAGACAATATG+CGG | + | chr5_4:10579036-10579055 | None:intergenic | 35.0% | |
CGCATATTGTCTATAACAAC+CGG | - | chr5_4:10579034-10579053 | Msa0836870:CDS | 35.0% | |
TTAAGTGAGATGGAAGATCA+TGG | + | chr5_4:10579189-10579208 | None:intergenic | 35.0% | |
TCTTCATTCTGTATAGGCAA+GGG | + | chr5_4:10579643-10579662 | None:intergenic | 35.0% | |
TTCTTCATTCTGTATAGGCA+AGG | + | chr5_4:10579644-10579663 | None:intergenic | 35.0% | |
GCAGATTCTTCATTCTGTAT+AGG | + | chr5_4:10579649-10579668 | None:intergenic | 35.0% | |
CTCTTGTATTGCACATATGA+AGG | + | chr5_4:10579682-10579701 | None:intergenic | 35.0% | |
ATGCTCAACTCCACTAAATT+TGG | + | chr5_4:10579746-10579765 | None:intergenic | 35.0% | |
GTAATGTTGCAAAATCCATC+AGG | + | chr5_4:10579797-10579816 | None:intergenic | 35.0% | |
GATACTGATCTTCTTCAATG+TGG | + | chr5_4:10579819-10579838 | None:intergenic | 35.0% | |
TATTGCGAAGTTGGAGAATT+TGG | - | chr5_4:10579874-10579893 | Msa0836870:CDS | 35.0% | |
CATCTCTTCTAAATCAGAAC+AGG | + | chr5_4:10579918-10579937 | None:intergenic | 35.0% | |
TTCAAGTCACCTATATCGTT+CGG | + | chr5_4:10580013-10580032 | None:intergenic | 35.0% | |
CTTGAGAAGTTCTACATGAA+GGG | - | chr5_4:10580037-10580056 | Msa0836870:CDS | 35.0% | |
! | CCCAAATTGATGACAGAATA+AGG | + | chr5_4:10580085-10580104 | None:intergenic | 35.0% |
TTCTATGCTTGCTTCAAGAG+TGG | + | chr5_4:10575731-10575750 | None:intergenic | 40.0% | |
! | GTTGCTTGTGAAGCTTTGAT+TGG | + | chr5_4:10575924-10575943 | None:intergenic | 40.0% |
TTTGATGAAGCTGAGGGATA+AGG | - | chr5_4:10575999-10576018 | Msa0836870:CDS | 40.0% | |
TTGACGAGAATGGTGAATTC+GGG | - | chr5_4:10576033-10576052 | Msa0836870:CDS | 40.0% | |
TGAATTCGGGTCAGTTTGAT+GGG | - | chr5_4:10576046-10576065 | Msa0836870:CDS | 40.0% | |
CCAATAAATTCAGGCTCTTC+AGG | + | chr5_4:10576099-10576118 | None:intergenic | 40.0% | |
CCTGAAGAGCCTGAATTTAT+TGG | - | chr5_4:10576096-10576115 | Msa0836870:CDS | 40.0% | |
!!! | GCTTCTGTACTTGTTTTGAC+TGG | - | chr5_4:10576168-10576187 | Msa0836870:CDS | 40.0% |
TTTGAGCTTATCAACCAGCT+TGG | - | chr5_4:10576308-10576327 | Msa0836870:CDS | 40.0% | |
TTGAGCTTATCAACCAGCTT+GGG | - | chr5_4:10576309-10576328 | Msa0836870:CDS | 40.0% | |
TTCTATAAGTTCTCCCAAGC+TGG | + | chr5_4:10576325-10576344 | None:intergenic | 40.0% | |
TCGTTTATAAAGTCAGGCAC+CGG | + | chr5_4:10576943-10576962 | None:intergenic | 40.0% | |
GAAGATGCAGTTAACCGATT+GGG | - | chr5_4:10576964-10576983 | Msa0836870:CDS | 40.0% | |
TTAAAAGATTTGGCACCCCA+TGG | - | chr5_4:10577124-10577143 | Msa0836870:intron | 40.0% | |
TTGCACCAATGAGACATGAT+TGG | - | chr5_4:10577286-10577305 | Msa0836870:intron | 40.0% | |
TCATGCCAATCATGTCTCAT+TGG | + | chr5_4:10577294-10577313 | None:intergenic | 40.0% | |
TTCTATGCACAGATAGTGAG+AGG | - | chr5_4:10577740-10577759 | Msa0836870:intron | 40.0% | |
ACAGATAGTGAGAGGTTGTA+AGG | - | chr5_4:10577748-10577767 | Msa0836870:intron | 40.0% | |
CAGATAGTGAGAGGTTGTAA+GGG | - | chr5_4:10577749-10577768 | Msa0836870:intron | 40.0% | |
TCATTGCTGGATCACTTTGT+GGG | - | chr5_4:10577792-10577811 | Msa0836870:CDS | 40.0% | |
TGAGAAGTGGGAAGAAATGA+AGG | - | chr5_4:10577823-10577842 | Msa0836870:CDS | 40.0% | |
CTTAAAGAGTCGATCCATTC+TGG | - | chr5_4:10577850-10577869 | Msa0836870:CDS | 40.0% | |
GGATATGTTGGAGGATATCA+AGG | - | chr5_4:10577934-10577953 | Msa0836870:CDS | 40.0% | |
!! | AAGGAGTGCTTCATGGATAT+GGG | - | chr5_4:10577959-10577978 | Msa0836870:CDS | 40.0% |
ATTCTGCCCACATATCAATG+AGG | + | chr5_4:10578021-10578040 | None:intergenic | 40.0% | |
TTGCATGACCTAGATGAAGA+TGG | - | chr5_4:10578040-10578059 | Msa0836870:CDS | 40.0% | |
TTCCTGAAATGGTAAGAGCA+GGG | + | chr5_4:10578570-10578589 | None:intergenic | 40.0% | |
GATCATGCAGCATGATATAG+TGG | + | chr5_4:10578823-10578842 | None:intergenic | 40.0% | |
CTAGCAATCCATCAAAGCAA+AGG | - | chr5_4:10578854-10578873 | Msa0836870:CDS | 40.0% | |
AGCAATCCATCAAAGCAAAG+GGG | - | chr5_4:10578856-10578875 | Msa0836870:CDS | 40.0% | |
CTGAATCAGCAAGGAATCAT+TGG | - | chr5_4:10578950-10578969 | Msa0836870:CDS | 40.0% | |
CGTATGTACTCATTCATTGC+CGG | - | chr5_4:10578974-10578993 | Msa0836870:CDS | 40.0% | |
GGTAAAACAGAGACAGCTAA+AGG | - | chr5_4:10579003-10579022 | Msa0836870:CDS | 40.0% | |
GTCTGACAAGTACTCATTAC+CGG | - | chr5_4:10579481-10579500 | Msa0836870:intron | 40.0% | |
! | CTCATTTTGTCGGTGAAATC+CGG | + | chr5_4:10579503-10579522 | None:intergenic | 40.0% |
ACTTGGTTACTTCAGAACGA+TGG | + | chr5_4:10579562-10579581 | None:intergenic | 40.0% | |
GTAACCAAGTTTGAGCTACT+TGG | - | chr5_4:10579572-10579591 | Msa0836870:intron | 40.0% | |
AGAACCAAGTAGCTCAAACT+TGG | + | chr5_4:10579579-10579598 | None:intergenic | 40.0% | |
! | CATGGCATCTGAAATTTGGA+TGG | + | chr5_4:10579723-10579742 | None:intergenic | 40.0% |
! | TTGGCATGGCATCTGAAATT+TGG | + | chr5_4:10579727-10579746 | None:intergenic | 40.0% |
AGATGCCATGCCAAATTTAG+TGG | - | chr5_4:10579733-10579752 | Msa0836870:CDS | 40.0% | |
CAACTCCACTAAATTTGGCA+TGG | + | chr5_4:10579741-10579760 | None:intergenic | 40.0% | |
TCCAACTTCGCAATATCTTG+AGG | + | chr5_4:10579869-10579888 | None:intergenic | 40.0% | |
!! | TGGAGAATTTGGAAGTGCTA+AGG | - | chr5_4:10579885-10579904 | Msa0836870:CDS | 40.0% |
!! | CGAGACAACATAGCTTGTTT+AGG | + | chr5_4:10579958-10579977 | None:intergenic | 40.0% |
GCTTGAGAAGTTCTACATGA+AGG | - | chr5_4:10580036-10580055 | Msa0836870:CDS | 40.0% | |
CATGTGATCTGTGATGAAGA+AGG | - | chr5_4:10580124-10580143 | Msa0836870:CDS | 40.0% | |
!! | ATGAAGAAGGTGCTGCATTA+TGG | - | chr5_4:10580137-10580156 | Msa0836870:CDS | 40.0% |
!! | TGAAGAAGGTGCTGCATTAT+GGG | - | chr5_4:10580138-10580157 | Msa0836870:CDS | 40.0% |
! | TTTGGATGCTTTGGCTCCTT+TGG | - | chr5_4:10575753-10575772 | Msa0836870:CDS | 45.0% |
GTGAATTCGGGTCAGTTTGA+TGG | - | chr5_4:10576045-10576064 | Msa0836870:CDS | 45.0% | |
!!! | CTTGTTTTGACTGGTTTGGG+TGG | - | chr5_4:10576177-10576196 | Msa0836870:CDS | 45.0% |
CCAACAGAGCTTCTTAGCAA+GGG | + | chr5_4:10576217-10576236 | None:intergenic | 45.0% | |
TCCAACAGAGCTTCTTAGCA+AGG | + | chr5_4:10576218-10576237 | None:intergenic | 45.0% | |
! | CACAAGACTAACGCCTTGTT+TGG | + | chr5_4:10576496-10576515 | None:intergenic | 45.0% |
AGGACGTTCGCCTTATGTTA+TGG | - | chr5_4:10576571-10576590 | Msa0836870:intron | 45.0% | |
CGTTCGCCTTATGTTATGGA+TGG | - | chr5_4:10576575-10576594 | Msa0836870:intron | 45.0% | |
CAAGATGGGAGTTTCAGAGA+CGG | + | chr5_4:10576881-10576900 | None:intergenic | 45.0% | |
CGAAGATGCAGTTAACCGAT+TGG | - | chr5_4:10576963-10576982 | Msa0836870:CDS | 45.0% | |
GATGTTTGGCCTAACTCAGA+AGG | - | chr5_4:10577036-10577055 | Msa0836870:CDS | 45.0% | |
TCAACAAGGCCTTCTGAGTT+AGG | + | chr5_4:10577048-10577067 | None:intergenic | 45.0% | |
ACAGCAGGATCATGATCAAG+TGG | + | chr5_4:10577159-10577178 | None:intergenic | 45.0% | |
TGATGGAAAAGAGACACAGC+AGG | + | chr5_4:10577174-10577193 | None:intergenic | 45.0% | |
TTCAAAGCTGTCAACTGACC+AGG | - | chr5_4:10577397-10577416 | Msa0836870:intron | 45.0% | |
TCAAAGCTGTCAACTGACCA+GGG | - | chr5_4:10577398-10577417 | Msa0836870:intron | 45.0% | |
TGTTTATCCAAACAGGACCC+TGG | + | chr5_4:10577418-10577437 | None:intergenic | 45.0% | |
CAAAGCAGTGCATGTCATGT+CGG | + | chr5_4:10577582-10577601 | None:intergenic | 45.0% | |
GTCATTGCTGGATCACTTTG+TGG | - | chr5_4:10577791-10577810 | Msa0836870:CDS | 45.0% | |
!! | TGGGAAGCCTTTTGAGAAGT+GGG | - | chr5_4:10577811-10577830 | Msa0836870:CDS | 45.0% |
GTTGGAGGATATCAAGGAGA+AGG | - | chr5_4:10577940-10577959 | Msa0836870:CDS | 45.0% | |
!! | GAAGGAGTGCTTCATGGATA+TGG | - | chr5_4:10577958-10577977 | Msa0836870:CDS | 45.0% |
GACTATTTCCTGAAGACCAG+AGG | - | chr5_4:10577981-10578000 | Msa0836870:CDS | 45.0% | |
GTCTATAGCCCTTGCTTTAG+TGG | + | chr5_4:10578205-10578224 | None:intergenic | 45.0% | |
TGTTGCAAGTTTGGTCTCAG+AGG | - | chr5_4:10578343-10578362 | Msa0836870:intron | 45.0% | |
CTTCCTGAAATGGTAAGAGC+AGG | + | chr5_4:10578571-10578590 | None:intergenic | 45.0% | |
CTGCTCTTACCATTTCAGGA+AGG | - | chr5_4:10578569-10578588 | Msa0836870:intron | 45.0% | |
!! | GATGGATTGCTAGTTCTCTG+AGG | + | chr5_4:10578847-10578866 | None:intergenic | 45.0% |
ATGGTTCCCCTTTGCTTTGA+TGG | + | chr5_4:10578865-10578884 | None:intergenic | 45.0% | |
ATGGAGATACTCGTCCTGAT+TGG | - | chr5_4:10578918-10578937 | Msa0836870:CDS | 45.0% | |
TTCAGTCCAATCCACCAATC+AGG | + | chr5_4:10578935-10578954 | None:intergenic | 45.0% | |
! | TGGATTGGACTGAATCAGCA+AGG | - | chr5_4:10578941-10578960 | Msa0836870:CDS | 45.0% |
CTCATTCATTGCCGGAATGT+TGG | - | chr5_4:10578982-10579001 | Msa0836870:CDS | 45.0% | |
AGCTGATGAAGCTGAGATTC+TGG | - | chr5_4:10579445-10579464 | Msa0836870:intron | 45.0% | |
GCCTCAAGATATTGCGAAGT+TGG | - | chr5_4:10579865-10579884 | Msa0836870:CDS | 45.0% | |
GAGATGTCAGAATCTGTTGC+AGG | - | chr5_4:10579932-10579951 | Msa0836870:CDS | 45.0% | |
!!! | TTTAACTTTTATTATAAAAA+TGG | + | chr5_4:10577503-10577522 | None:intergenic | 5.0% |
!! | ATGGCGGATCTATTGAGTGG+AGG | - | chr5_4:10575631-10575650 | Msa0836870:CDS | 50.0% |
! | CTATTGAGTGGAGGTGCAGT+TGG | - | chr5_4:10575640-10575659 | Msa0836870:CDS | 50.0% |
GATGAAGCTGAGGGATAAGG+TGG | - | chr5_4:10576002-10576021 | Msa0836870:CDS | 50.0% | |
!! | TTGACTGGTTTGGGTGGATC+TGG | - | chr5_4:10576183-10576202 | Msa0836870:CDS | 50.0% |
CCCTTGCTAAGAAGCTCTGT+TGG | - | chr5_4:10576214-10576233 | Msa0836870:CDS | 50.0% | |
AAGTGGATCCAACTGCCATG+GGG | + | chr5_4:10577142-10577161 | None:intergenic | 50.0% | |
CAAGTGGATCCAACTGCCAT+GGG | + | chr5_4:10577143-10577162 | None:intergenic | 50.0% | |
TCAAGTGGATCCAACTGCCA+TGG | + | chr5_4:10577144-10577163 | None:intergenic | 50.0% | |
AGGTTGTAAGGGTTCACCGT+TGG | - | chr5_4:10577760-10577779 | Msa0836870:intron | 50.0% | |
!! | GTGGGAAGCCTTTTGAGAAG+TGG | - | chr5_4:10577810-10577829 | Msa0836870:CDS | 50.0% |
!! | CAAGGAGAAGGAGTGCTTCA+TGG | - | chr5_4:10577952-10577971 | Msa0836870:CDS | 50.0% |
TGAAATGGTAAGAGCAGGGC+CGG | + | chr5_4:10578566-10578585 | None:intergenic | 50.0% | |
GAGATACTCGTCCTGATTGG+TGG | - | chr5_4:10578921-10578940 | Msa0836870:CDS | 50.0% | |
! | ACTCGTCCTGATTGGTGGAT+TGG | - | chr5_4:10578926-10578945 | Msa0836870:CDS | 50.0% |
!! | GAGGCATTGCAGAAAGCTTG+TGG | + | chr5_4:10579850-10579869 | None:intergenic | 50.0% |
AGGTGCAGTTGGAGCTGGAA+TGG | - | chr5_4:10575651-10575670 | Msa0836870:CDS | 55.0% | |
GGTGCAGTTGGAGCTGGAAT+GGG | - | chr5_4:10575652-10575671 | Msa0836870:CDS | 55.0% | |
ACCGATTGGGAACTCTGCTG+AGG | - | chr5_4:10576977-10576996 | Msa0836870:CDS | 55.0% | |
GCCTCAGCAGAGTTCCCAAT+CGG | + | chr5_4:10576981-10577000 | None:intergenic | 55.0% | |
GGAACTCTGCTGAGGCAAGT+TGG | - | chr5_4:10576985-10577004 | Msa0836870:CDS | 55.0% | |
ATTTGGCACCCCATGGCAGT+TGG | - | chr5_4:10577131-10577150 | Msa0836870:intron | 55.0% | |
CAACTGACCAGGGTCCTGTT+TGG | - | chr5_4:10577408-10577427 | Msa0836870:intron | 55.0% | |
! | GCAATGACCTGAAGCGCCAA+CGG | + | chr5_4:10577779-10577798 | None:intergenic | 55.0% |
TTGGCGCTTCAGGTCATTGC+TGG | - | chr5_4:10577779-10577798 | Msa0836870:CDS | 55.0% | |
! | ACAGGGATCCTCTGGTCTTC+AGG | + | chr5_4:10577992-10578011 | None:intergenic | 55.0% |
GGACAGTAACAGGGATCCTC+TGG | + | chr5_4:10578000-10578019 | None:intergenic | 55.0% | |
CCTGTACTCTTACCCAGAGC+CGG | - | chr5_4:10578166-10578185 | Msa0836870:intron | 55.0% | |
GGCCTACATATGCATTGGGC+CGG | - | chr5_4:10578544-10578563 | Msa0836870:intron | 55.0% | |
GGCCCTGCTCTTACCATTTC+AGG | - | chr5_4:10578565-10578584 | Msa0836870:intron | 55.0% | |
! | AGTGGAGGTGCAGTTGGAGC+TGG | - | chr5_4:10575646-10575665 | Msa0836870:CDS | 60.0% |
!! | CCGGCTCTGGGTAAGAGTAC+AGG | + | chr5_4:10578169-10578188 | None:intergenic | 60.0% |
GCTTTAGTGGCAGCCCCCTT+GGG | + | chr5_4:10578192-10578211 | None:intergenic | 60.0% | |
TGCTTTAGTGGCAGCCCCCT+TGG | + | chr5_4:10578193-10578212 | None:intergenic | 60.0% | |
AGGGGGCTGCCACTAAAGCA+AGG | - | chr5_4:10578193-10578212 | Msa0836870:intron | 60.0% | |
GGGGGCTGCCACTAAAGCAA+GGG | - | chr5_4:10578194-10578213 | Msa0836870:intron | 60.0% | |
GGCCGGCCCAATGCATATGT+AGG | + | chr5_4:10578549-10578568 | None:intergenic | 60.0% | |
GGGTTCACCGTTGGCGCTTC+AGG | - | chr5_4:10577769-10577788 | Msa0836870:intron | 65.0% | |
TCTTACCCAGAGCCGGCCCA+AGG | - | chr5_4:10578173-10578192 | Msa0836870:intron | 65.0% | |
CTTACCCAGAGCCGGCCCAA+GGG | - | chr5_4:10578174-10578193 | Msa0836870:intron | 65.0% | |
TTACCCAGAGCCGGCCCAAG+GGG | - | chr5_4:10578175-10578194 | Msa0836870:intron | 65.0% | |
TACCCAGAGCCGGCCCAAGG+GGG | - | chr5_4:10578176-10578195 | Msa0836870:intron | 70.0% | |
TAGTGGCAGCCCCCTTGGGC+CGG | + | chr5_4:10578188-10578207 | None:intergenic | 70.0% | |
! | AGCCCCCTTGGGCCGGCTCT+GGG | + | chr5_4:10578181-10578200 | None:intergenic | 75.0% |
!! | CAGCCCCCTTGGGCCGGCTC+TGG | + | chr5_4:10578182-10578201 | None:intergenic | 80.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5_4 | gene | 10575631 | 10580276 | 10575631 | ID=Msa0836870;Name=Msa0836870 |
chr5_4 | mRNA | 10575631 | 10580276 | 10575631 | ID=Msa0836870-mRNA-1;Parent=Msa0836870;Name=Msa0836870-mRNA-1;_AED=0.18;_eAED=0.18;_QI=0|0|0|1|1|1|5|0|846 |
chr5_4 | exon | 10579655 | 10580276 | 10579655 | ID=Msa0836870-mRNA-1:exon:4651;Parent=Msa0836870-mRNA-1 |
chr5_4 | exon | 10578656 | 10579059 | 10578656 | ID=Msa0836870-mRNA-1:exon:4650;Parent=Msa0836870-mRNA-1 |
chr5_4 | exon | 10577779 | 10578155 | 10577779 | ID=Msa0836870-mRNA-1:exon:4649;Parent=Msa0836870-mRNA-1 |
chr5_4 | exon | 10576852 | 10577123 | 10576852 | ID=Msa0836870-mRNA-1:exon:4648;Parent=Msa0836870-mRNA-1 |
chr5_4 | exon | 10575631 | 10576496 | 10575631 | ID=Msa0836870-mRNA-1:exon:4647;Parent=Msa0836870-mRNA-1 |
chr5_4 | CDS | 10579655 | 10580276 | 10579655 | ID=Msa0836870-mRNA-1:cds;Parent=Msa0836870-mRNA-1 |
chr5_4 | CDS | 10578656 | 10579059 | 10578656 | ID=Msa0836870-mRNA-1:cds;Parent=Msa0836870-mRNA-1 |
chr5_4 | CDS | 10577779 | 10578155 | 10577779 | ID=Msa0836870-mRNA-1:cds;Parent=Msa0836870-mRNA-1 |
chr5_4 | CDS | 10576852 | 10577123 | 10576852 | ID=Msa0836870-mRNA-1:cds;Parent=Msa0836870-mRNA-1 |
chr5_4 | CDS | 10575631 | 10576496 | 10575631 | ID=Msa0836870-mRNA-1:cds;Parent=Msa0836870-mRNA-1 |
Gene Sequence |
Protein sequence |