AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0240270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0240270 MtrunA17_Chr2g0329251 98.844 346 4 0 1 346 1 346 0.0 707
Msa0240270 MtrunA17_Chr7g0215941 34.675 323 137 9 37 346 50 311 7.11e-52 174
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0240270 AT2G43320.1 67.232 354 105 6 1 346 1 351 3.19e-170 478
Msa0240270 AT2G43320.2 67.232 354 105 6 1 346 1 351 3.19e-170 478
Msa0240270 AT4G14000.1 33.758 314 139 5 38 346 41 290 9.23e-50 168

Find 100 sgRNAs with CRISPR-Local

Find 305 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATGGAACTGGACCAGGATTT+TGG 0.176468 2_2:+15062796 None:intergenic
TTCAAAGAGTTAACAGAGTA+TGG 0.230271 2_2:+15061488 None:intergenic
TCGATGAATGATTGAGATTA+AGG 0.290013 2_2:-15060318 Msa0240270:three_prime_UTR
ATTGGAATTGTAAATCAAAA+TGG 0.337142 2_2:-15060477 Msa0240270:three_prime_UTR
TTGGATAAGAAACTCAATAT+TGG 0.338601 2_2:-15060495 Msa0240270:three_prime_UTR
ATTCAGAGAGAGTTAGGTTT+TGG 0.338623 2_2:+15065331 None:intergenic
TGATTGAGATTAAGGTAAAA+TGG 0.344847 2_2:-15060310 Msa0240270:three_prime_UTR
ACCTAACTCTCTCTGAATTC+AGG 0.349207 2_2:-15065326 Msa0240270:intron
AAGAGCTAATGAGGCAGATC+AGG 0.351711 2_2:-15061549 Msa0240270:CDS
ACCTGAATTCAGAGAGAGTT+AGG 0.362655 2_2:+15065325 None:intergenic
AGTGCATTTGGTTAAGGATT+TGG 0.364694 2_2:-15060772 Msa0240270:CDS
GTGCAGCTCAGTTGCAACTA+TGG 0.367887 2_2:-15062482 Msa0240270:intron
GGTCGATCAACCACTGGATT+AGG 0.368562 2_2:+15060375 None:intergenic
ATTGTTTATAAAAGAGAAAA+AGG 0.384476 2_2:-15060341 Msa0240270:three_prime_UTR
TGGAATCTTTGCTTGCTTGA+AGG 0.385742 2_2:-15062453 Msa0240270:intron
TGCTGAAACGTACCTTAAAA+TGG 0.388735 2_2:+15063845 None:intergenic
AAGCATTGTGAAAGTATTGC+CGG 0.390945 2_2:+15064179 None:intergenic
GTAAGCGTTGCTGATATCAT+AGG 0.392075 2_2:-15063259 Msa0240270:CDS
CCAACATAGTGCTTCTTAGT+TGG 0.393791 2_2:+15060852 None:intergenic
TTCTTATAGCTTAGTAATAA+CGG 0.393972 2_2:-15060598 Msa0240270:three_prime_UTR
AGTTGCAACTATGGACTTCC+TGG 0.402863 2_2:-15062473 Msa0240270:CDS
GAGAAGCTCAAACTCATTCC+AGG 0.407503 2_2:+15061677 None:intergenic
ATTTGGCTGACAGAGATATC+TGG 0.407805 2_2:-15060755 Msa0240270:CDS
AGCCAAGATGGTAGCATCAT+TGG 0.412480 2_2:-15061626 Msa0240270:CDS
AATGGTAGTTGTACCTTTGA+AGG 0.422490 2_2:+15064062 None:intergenic
GAGTCTGCCTTGAAGGAGTA+AGG 0.430875 2_2:+15061789 None:intergenic
GGCCTAGTGCCTCGCGATCA+TGG 0.432544 2_2:-15064152 Msa0240270:CDS
TGCGAGATGAATAGATTTCT+CGG 0.432591 2_2:+15064106 None:intergenic
GCAAGATATACTACTCCATA+TGG 0.440913 2_2:+15060876 None:intergenic
GGTGCAAGAGTCTGCCTTGA+AGG 0.442524 2_2:+15061782 None:intergenic
TTCAAGCAAGCAAAGATTCC+AGG 0.447556 2_2:+15062455 None:intergenic
ACTGACAAGATCGATGGAAC+TGG 0.456884 2_2:+15062783 None:intergenic
ATACTTTCACAATGCTTGCC+TGG 0.461266 2_2:-15064173 Msa0240270:CDS
AGTCTCCCCTTACTCCTTCA+AGG 0.467899 2_2:-15061796 Msa0240270:CDS
GTTTATCTTATCAGTTCGAC+AGG 0.468980 2_2:-15064236 Msa0240270:intron
TTTCACACTGACAAGGAAGC+TGG 0.471457 2_2:-15063880 Msa0240270:CDS
TGATCGCGAGGCACTAGGCC+AGG 0.473160 2_2:+15064155 None:intergenic
TCGATCTTGTCAGTGTTCTC+AGG 0.478533 2_2:-15062774 Msa0240270:CDS
CACTATGTTGGCTTTAGCAA+TGG 0.487530 2_2:-15060840 Msa0240270:CDS
ATCTCAAGCAAGCTCGTGAT+AGG 0.490045 2_2:-15061835 Msa0240270:CDS
GCTGTATGCTCTCATTAAGA+AGG 0.490565 2_2:-15061462 Msa0240270:intron
GTCCAATGATGCTACCATCT+TGG 0.492533 2_2:+15061624 None:intergenic
AATCTAGTTCAAGAAGGTCT+AGG 0.505401 2_2:-15061598 Msa0240270:CDS
GTTGCTGATATCATAGGGTT+CGG 0.512763 2_2:-15063253 Msa0240270:CDS
TTGAGATTACCAAGGACATT+CGG 0.513103 2_2:+15061851 None:intergenic
AGCATTGTGAAAGTATTGCC+GGG 0.518150 2_2:+15064180 None:intergenic
GATGGATATGAAGCGACACC+TGG 0.521604 2_2:-15061695 Msa0240270:CDS
TTCACACTGACAAGGAAGCT+GGG 0.523575 2_2:-15063879 Msa0240270:CDS
CAGTGTATAAGGCCTCCATA+TGG 0.523925 2_2:-15060891 Msa0240270:CDS
ATCAACTGCAATGCGTGCCC+CGG 0.524425 2_2:-15064198 Msa0240270:exon
AGAGACAATATCCTCAAGAC+TGG 0.526398 2_2:-15063224 Msa0240270:CDS
AACTCTCAGGAAGTCGAGCA+TGG 0.526851 2_2:-15061574 Msa0240270:CDS
AAGATCGATGGAACTGGACC+AGG 0.529297 2_2:+15062789 None:intergenic
GAAGGAAGAATCTCCACTGC+TGG 0.530773 2_2:+15064080 None:intergenic
TTGTAGGCTATCCAAAATCC+TGG 0.531728 2_2:-15062807 Msa0240270:intron
GAAGGAGTAAGGGGAGACTC+TGG 0.536647 2_2:+15061800 None:intergenic
AGTGGAGATTCTTCCTTCAA+AGG 0.538231 2_2:-15064075 Msa0240270:intron
ACAAGAATTCAAAGATCAGA+TGG 0.539641 2_2:-15060714 Msa0240270:three_prime_UTR
TTATGGGGTCGATCAACCAC+TGG 0.546807 2_2:+15060369 None:intergenic
AGTCTGCCTTGAAGGAGTAA+GGG 0.548303 2_2:+15061790 None:intergenic
ACAACTGTACCGAATGTCCT+TGG 0.550768 2_2:-15061860 Msa0240270:CDS
AGAAGGTCTAGGAAACTCTC+AGG 0.551273 2_2:-15061587 Msa0240270:CDS
GCGAGATGAATAGATTTCTC+GGG 0.552759 2_2:+15064107 None:intergenic
GTCTGCCTTGAAGGAGTAAG+GGG 0.556078 2_2:+15061791 None:intergenic
CTCAGGAATGAGATTCGTGA+TGG 0.559089 2_2:-15062757 Msa0240270:CDS
GATGGGCAATTGACCTTCAG+AGG 0.568466 2_2:-15062739 Msa0240270:CDS
GATGTAGGTAGTAGCCAAGA+TGG 0.572612 2_2:-15061638 Msa0240270:CDS
AGAGCTAATGAGGCAGATCA+GGG 0.576077 2_2:-15061548 Msa0240270:CDS
TAAGCGTTGCTGATATCATA+GGG 0.576434 2_2:-15063258 Msa0240270:CDS
CCAACTAAGAAGCACTATGT+TGG 0.576670 2_2:-15060852 Msa0240270:CDS
AGCATGGGAAAGAGCTAATG+AGG 0.580629 2_2:-15061558 Msa0240270:CDS
TTCCATGATCGCGAGGCACT+AGG 0.581410 2_2:+15064150 None:intergenic
ACTCTCAGGAAGTCGAGCAT+GGG 0.581643 2_2:-15061573 Msa0240270:CDS
GAGAAATGTGTTAGATGAGG+AGG 0.584734 2_2:-15060805 Msa0240270:CDS
TCTCTCCTTTCCTAATCCAG+TGG 0.588964 2_2:-15060385 Msa0240270:three_prime_UTR
TCATCTCGCATCACCAGCAG+TGG 0.589124 2_2:-15064093 Msa0240270:CDS
ACAATATCCTCAAGACTGGA+TGG 0.597780 2_2:-15063220 Msa0240270:intron
AGCTAATGAGGCAGATCAGG+GGG 0.601274 2_2:-15061546 Msa0240270:CDS
GACACGAATCTAGTTCAAGA+AGG 0.606715 2_2:-15061604 Msa0240270:CDS
GGTAAAATGGACAACGTGAG+AGG 0.607175 2_2:-15060297 Msa0240270:three_prime_UTR
ATCAACCACTGGATTAGGAA+AGG 0.608883 2_2:+15060380 None:intergenic
GAGAACACTGACAAGATCGA+TGG 0.620581 2_2:+15062777 None:intergenic
TTCACAGTAGACAACACGCT+AGG 0.621926 2_2:+15061722 None:intergenic
GTACATACCATCCAGTCTTG+AGG 0.628458 2_2:+15063213 None:intergenic
GCTGATATCATAGGGTTCGG+TGG 0.633196 2_2:-15063250 Msa0240270:CDS
GCTGAGAAATGTGTTAGATG+AGG 0.637065 2_2:-15060808 Msa0240270:CDS
AGAAATGTGTTAGATGAGGA+GGG 0.641023 2_2:-15060804 Msa0240270:CDS
TCAGGAATGAGATTCGTGAT+GGG 0.642794 2_2:-15062756 Msa0240270:CDS
CTGATCTTGAAAATGCACAA+TGG 0.646401 2_2:+15061904 None:intergenic
CCAGCATAAAAGTTAACAGA+CGG 0.654796 2_2:+15061761 None:intergenic
CTGAGACTTCCATGATCGCG+AGG 0.660220 2_2:+15064143 None:intergenic
AATGAGTTTGAGCTTCTCTG+AGG 0.665222 2_2:-15061672 Msa0240270:CDS
TCACACTGACAAGGAAGCTG+GGG 0.671691 2_2:-15063878 Msa0240270:CDS
TCAGTGCAAAGCAATCTCAT+CGG 0.682317 2_2:-15060540 Msa0240270:three_prime_UTR
AGATATACTACTCCATATGG+AGG 0.684240 2_2:+15060879 None:intergenic
GCAGGCGTTTCACACTGACA+AGG 0.685156 2_2:-15063887 Msa0240270:intron
GAGCTAATGAGGCAGATCAG+GGG 0.688813 2_2:-15061547 Msa0240270:CDS
TTATAGCTTAGTAATAACGG+AGG 0.695621 2_2:-15060595 Msa0240270:three_prime_UTR
GCATTGTGAAAGTATTGCCG+GGG 0.703393 2_2:+15064181 None:intergenic
GAGCTTGCTTGAGATTACCA+AGG 0.706867 2_2:+15061843 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TATATATTGTTATTGAAAAT+AGG - chr2_2:15061049-15061068 Msa0240270:intron 10.0%
!!! ATATATTGTTATTGAAAATA+GGG - chr2_2:15061050-15061069 Msa0240270:intron 10.0%
!! GTCTTTAATTAAATTATTTA+TGG - chr2_2:15061924-15061943 Msa0240270:intron 10.0%
!!! ATTTTTTTTTTTAAGTCTTT+TGG - chr2_2:15063648-15063667 Msa0240270:intron 10.0%
!!! TATAAACAATTTTTTTTATG+GGG + chr2_2:15065341-15065360 None:intergenic 10.0%
!! TTCTATGATCATATATAATT+AGG - chr2_2:15060457-15060476 Msa0240270:intron 15.0%
!!! ACAAAAAAGATCAAAATTTT+GGG + chr2_2:15060583-15060602 None:intergenic 15.0%
!!! AACAAAAAAGATCAAAATTT+TGG + chr2_2:15060584-15060603 None:intergenic 15.0%
!!! TTTTTGTTTTTTTCACTATT+AGG - chr2_2:15060596-15060615 Msa0240270:three_prime_UTR 15.0%
!!! TTTGAACTTTTTTAGAAAAA+GGG - chr2_2:15060650-15060669 Msa0240270:three_prime_UTR 15.0%
!! GTTAAAAAAATAATTGCAAT+TGG - chr2_2:15060776-15060795 Msa0240270:CDS 15.0%
!!! TATATAGTGTTATTGAAAAT+AGG - chr2_2:15060996-15061015 Msa0240270:intron 15.0%
!!! ATATAGTGTTATTGAAAATA+GGG - chr2_2:15060997-15061016 Msa0240270:intron 15.0%
!! ACTAAAAAGATTGAAAAATA+TGG + chr2_2:15063145-15063164 None:intergenic 15.0%
!! TCTAATTGAATACAATAAAT+TGG + chr2_2:15064525-15064544 None:intergenic 15.0%
!! ATTTATTGTATTCAATTAGA+CGG - chr2_2:15064525-15064544 Msa0240270:intron 15.0%
!! ATTGTTTATAAAAGAGAAAA+AGG - chr2_2:15065351-15065370 Msa0240270:five_prime_UTR 15.0%
!!! CAAAAAAGATCAAAATTTTG+GGG + chr2_2:15060582-15060601 None:intergenic 20.0%
!!! GTTTGAACTTTTTTAGAAAA+AGG - chr2_2:15060649-15060668 Msa0240270:three_prime_UTR 20.0%
!!! ATGTTTTTATTTTATGTGCA+TGG - chr2_2:15060698-15060717 Msa0240270:three_prime_UTR 20.0%
!! ATCGTACTATTAATTATTCT+CGG + chr2_2:15061100-15061119 None:intergenic 20.0%
!!! TAAAAACAAATACTTCCTTT+TGG - chr2_2:15061134-15061153 Msa0240270:intron 20.0%
!!! TAATAAATAGCGAAGTTTTT+AGG - chr2_2:15061259-15061278 Msa0240270:intron 20.0%
!!! CATTGAATTATTGAACTTTT+GGG + chr2_2:15062068-15062087 None:intergenic 20.0%
!!! ACATTGAATTATTGAACTTT+TGG + chr2_2:15062069-15062088 None:intergenic 20.0%
!!! ATTATTTTTCTGACACAAAT+TGG + chr2_2:15062741-15062760 None:intergenic 20.0%
!! AAAAAGAATCCAAAATCTTT+AGG + chr2_2:15063582-15063601 None:intergenic 20.0%
!!! AAAGATTTTGGATTCTTTTT+TGG - chr2_2:15063582-15063601 Msa0240270:intron 20.0%
!!! TTTTGGTAGAATAAAAACAA+TGG - chr2_2:15063665-15063684 Msa0240270:intron 20.0%
!! GAATAAAAACAATGGTTAAT+TGG - chr2_2:15063673-15063692 Msa0240270:intron 20.0%
!! TTGAATACAATAAATTGGTA+TGG + chr2_2:15064520-15064539 None:intergenic 20.0%
!! TTACTAAGCTATAAGAAAAA+TGG + chr2_2:15065091-15065110 None:intergenic 20.0%
!! TTCTTATAGCTTAGTAATAA+CGG - chr2_2:15065094-15065113 Msa0240270:intron 20.0%
!! ATTGGAATTGTAAATCAAAA+TGG - chr2_2:15065215-15065234 Msa0240270:intron 20.0%
!! AAATTTTGTTGAAGTCTGAA+AGG + chr2_2:15060287-15060306 None:intergenic 25.0%
! GGTTATTAAATGTCACTATT+AGG - chr2_2:15061071-15061090 Msa0240270:intron 25.0%
!!! TTTTTGCTGTTGATTGTTTA+GGG + chr2_2:15061679-15061698 None:intergenic 25.0%
!!! ATTTTTGCTGTTGATTGTTT+AGG + chr2_2:15061680-15061699 None:intergenic 25.0%
! TACCTTGAAAGTTGAAATTA+AGG - chr2_2:15061707-15061726 Msa0240270:CDS 25.0%
!! TCATAGTAATTGTTTTCTGA+AGG - chr2_2:15061879-15061898 Msa0240270:CDS 25.0%
!! CATAGTAATTGTTTTCTGAA+GGG - chr2_2:15061880-15061899 Msa0240270:CDS 25.0%
! TATTGTTGAATCAATGATAG+TGG - chr2_2:15061958-15061977 Msa0240270:intron 25.0%
!! ATTTTATTGATATGGATCAG+GGG + chr2_2:15062126-15062145 None:intergenic 25.0%
!! CATTTTATTGATATGGATCA+GGG + chr2_2:15062127-15062146 None:intergenic 25.0%
! CTGATCCATATCAATAAAAT+GGG - chr2_2:15062126-15062145 Msa0240270:intron 25.0%
! CCTTTGGCAAAATAATATAA+AGG + chr2_2:15062165-15062184 None:intergenic 25.0%
!!! CCTTTATATTATTTTGCCAA+AGG - chr2_2:15062162-15062181 Msa0240270:intron 25.0%
! GTAAAGTAAAGAATCGTATT+CGG + chr2_2:15062205-15062224 None:intergenic 25.0%
!!! AGAAAGTTTTCAAGAAAATG+AGG + chr2_2:15062298-15062317 None:intergenic 25.0%
! ATACCTAGCAAAAACTTTAT+TGG - chr2_2:15062638-15062657 Msa0240270:intron 25.0%
! AAAAACTTTATTGGCATGAA+AGG - chr2_2:15062647-15062666 Msa0240270:intron 25.0%
!!! TAATATAGCATTGACCTTAA+GGG + chr2_2:15062683-15062702 None:intergenic 25.0%
!!! TTAATATAGCATTGACCTTA+AGG + chr2_2:15062684-15062703 None:intergenic 25.0%
!!! TTTTTTCCTCATCAATACAA+AGG - chr2_2:15062830-15062849 Msa0240270:intron 25.0%
! CATTTGTAAATGAGAAAAAG+AGG + chr2_2:15063068-15063087 None:intergenic 25.0%
!! CAATGTAATAGTGTTGAAAT+TGG - chr2_2:15063442-15063461 Msa0240270:intron 25.0%
! TGAAATAAAGAACCATTTAG+AGG + chr2_2:15063758-15063777 None:intergenic 25.0%
!! TAAATGGTTCTTTATTTCAC+AGG - chr2_2:15063759-15063778 Msa0240270:intron 25.0%
!! AAATGGTTCTTTATTTCACA+GGG - chr2_2:15063760-15063779 Msa0240270:intron 25.0%
!! AAGGTTTGTTTCATTATACT+TGG - chr2_2:15064249-15064268 Msa0240270:intron 25.0%
! AACACAATGAAATTTCATCA+AGG - chr2_2:15064576-15064595 Msa0240270:intron 25.0%
! ACTCAAATAAAATTGACAAG+AGG + chr2_2:15064705-15064724 None:intergenic 25.0%
!! ACATTCTTATTCCTATTTTC+TGG - chr2_2:15064764-15064783 Msa0240270:intron 25.0%
! CCTTATACACTGTTATAAAA+GGG + chr2_2:15064793-15064812 None:intergenic 25.0%
! TTGGATAAGAAACTCAATAT+TGG - chr2_2:15065197-15065216 Msa0240270:intron 25.0%
! AAAATTGAAACTATCCTTTC+TGG - chr2_2:15065245-15065264 Msa0240270:intron 25.0%
! TGATTGAGATTAAGGTAAAA+TGG - chr2_2:15065382-15065401 Msa0240270:five_prime_UTR 25.0%
AGTAAAATTCACACGAGAAA+AGG + chr2_2:15060483-15060502 None:intergenic 30.0%
!! ATAATGATTTGGTCGGTATT+TGG + chr2_2:15061180-15061199 None:intergenic 30.0%
AATACCGACCAAATCATTAT+CGG - chr2_2:15061180-15061199 Msa0240270:intron 30.0%
AACTTCGCTATTTATTACGA+AGG + chr2_2:15061256-15061275 None:intergenic 30.0%
TCATGATCATGTATTCAACA+TGG + chr2_2:15061296-15061315 None:intergenic 30.0%
! TAAGTGTAAAGTTTGATAGC+TGG - chr2_2:15061393-15061412 Msa0240270:intron 30.0%
!!! TTTTGCTGTTGATTGTTTAG+GGG + chr2_2:15061678-15061697 None:intergenic 30.0%
TGCCTTAATTTCAACTTTCA+AGG + chr2_2:15061712-15061731 None:intergenic 30.0%
!!! TTGAATTTTTTGCCCACTTT+TGG - chr2_2:15061737-15061756 Msa0240270:CDS 30.0%
!!! TGAATTTTTTGCCCACTTTT+GGG - chr2_2:15061738-15061757 Msa0240270:CDS 30.0%
! GGAAAATACTGACCATTTTA+AGG - chr2_2:15061835-15061854 Msa0240270:CDS 30.0%
TTGGTTTCCATTCTTTCATT+TGG - chr2_2:15061993-15062012 Msa0240270:intron 30.0%
ATACTAGCCAAATGAAAGAA+TGG + chr2_2:15062003-15062022 None:intergenic 30.0%
TTCATTTGGCTAGTATCAAT+CGG - chr2_2:15062007-15062026 Msa0240270:intron 30.0%
! CCATTTTATTGATATGGATC+AGG + chr2_2:15062128-15062147 None:intergenic 30.0%
CCTGATCCATATCAATAAAA+TGG - chr2_2:15062125-15062144 Msa0240270:intron 30.0%
! TGCATCCCATTTTATTGATA+TGG + chr2_2:15062134-15062153 None:intergenic 30.0%
ATATCAATAAAATGGGATGC+AGG - chr2_2:15062133-15062152 Msa0240270:intron 30.0%
! CAGTTAGTTTAATAGTTGAG+CGG - chr2_2:15062375-15062394 Msa0240270:intron 30.0%
TACATGATATTTCAGTCTGT+AGG - chr2_2:15062499-15062518 Msa0240270:intron 30.0%
GAGAGAAAATAGTAGTTCAT+AGG + chr2_2:15062546-15062565 None:intergenic 30.0%
! ATGCCAATAAAGTTTTTGCT+AGG + chr2_2:15062644-15062663 None:intergenic 30.0%
TTTATTGGCATGAAAGGAAA+AGG - chr2_2:15062653-15062672 Msa0240270:intron 30.0%
GAATTAAAACGACCAAATCA+AGG + chr2_2:15063031-15063050 None:intergenic 30.0%
AAGAAAAGAGAGAAATCTTG+TGG + chr2_2:15063112-15063131 None:intergenic 30.0%
GATTGAAAAATATGGCTCAA+GGG + chr2_2:15063137-15063156 None:intergenic 30.0%
AGATTGAAAAATATGGCTCA+AGG + chr2_2:15063138-15063157 None:intergenic 30.0%
! AACATTCATCTTGTTTGTGT+AGG - chr2_2:15063356-15063375 Msa0240270:intron 30.0%
CAAATAGAACAATGTCTTCT+TGG - chr2_2:15063547-15063566 Msa0240270:intron 30.0%
AGAATCCAAAATCTTTAGGT+TGG + chr2_2:15063578-15063597 None:intergenic 30.0%
TCAAAGAAACATTCACTCAT+TGG - chr2_2:15063717-15063736 Msa0240270:intron 30.0%
AATATTCTCTGTCCTCTAAA+TGG - chr2_2:15063743-15063762 Msa0240270:intron 30.0%
TTGTCTACTGTGAAAAATGA+TGG - chr2_2:15063979-15063998 Msa0240270:intron 30.0%
TTCAAAGAGTTAACAGAGTA+TGG + chr2_2:15064207-15064226 None:intergenic 30.0%
TATACTAAACTGCATATCTG+TGG - chr2_2:15064300-15064319 Msa0240270:intron 30.0%
GCATATAACTGTTAGACAAA+TGG - chr2_2:15064322-15064341 Msa0240270:intron 30.0%
ATAACTGTTAGACAAATGGT+TGG - chr2_2:15064326-15064345 Msa0240270:intron 30.0%
TCAGATACAACAAATCAACA+TGG - chr2_2:15064468-15064487 Msa0240270:intron 30.0%
! ATAGATTTTCAGACGAAGTA+AGG - chr2_2:15064605-15064624 Msa0240270:intron 30.0%
TAAAAGGGAAACCAGAAAAT+AGG + chr2_2:15064778-15064797 None:intergenic 30.0%
! CCCTTTTATAACAGTGTATA+AGG - chr2_2:15064790-15064809 Msa0240270:intron 30.0%
GCCTTATACACTGTTATAAA+AGG + chr2_2:15064794-15064813 None:intergenic 30.0%
ACAAGAATTCAAAGATCAGA+TGG - chr2_2:15064978-15064997 Msa0240270:intron 30.0%
TTATAGCTTAGTAATAACGG+AGG - chr2_2:15065097-15065116 Msa0240270:intron 30.0%
TCGATGAATGATTGAGATTA+AGG - chr2_2:15065374-15065393 Msa0240270:five_prime_UTR 30.0%
! ATTCAGAGAGAGTTAGGTTT+TGG + chr2_2:15060364-15060383 None:intergenic 35.0%
TGATCAACTAACACTTGAAC+TGG - chr2_2:15060833-15060852 Msa0240270:CDS 35.0%
ATACCGACCAAATCATTATC+GGG - chr2_2:15061181-15061200 Msa0240270:intron 35.0%
AAAGCAACCCGATAATGATT+TGG + chr2_2:15061191-15061210 None:intergenic 35.0%
GACAATATCATGCGAGTTAA+TGG - chr2_2:15061325-15061344 Msa0240270:intron 35.0%
ATATCATGCGAGTTAATGGT+TGG - chr2_2:15061329-15061348 Msa0240270:intron 35.0%
GTTTATCTTATCAGTTCGAC+AGG - chr2_2:15061456-15061475 Msa0240270:intron 35.0%
!! AAGCATTGTGAAAGTATTGC+CGG + chr2_2:15061516-15061535 None:intergenic 35.0%
TGCGAGATGAATAGATTTCT+CGG + chr2_2:15061589-15061608 None:intergenic 35.0%
AATGGTAGTTGTACCTTTGA+AGG + chr2_2:15061633-15061652 None:intergenic 35.0%
TTATATATGTCATGCTCTGC+AGG - chr2_2:15061787-15061806 Msa0240270:CDS 35.0%
TGCTGAAACGTACCTTAAAA+TGG + chr2_2:15061850-15061869 None:intergenic 35.0%
!!! TTTTAAGGTACGTTTCAGCA+TGG - chr2_2:15061850-15061869 Msa0240270:CDS 35.0%
!! AGTAATTGTTTTCTGAAGGG+TGG - chr2_2:15061883-15061902 Msa0240270:CDS 35.0%
!! GTTGAATCAATGATAGTGGA+AGG - chr2_2:15061962-15061981 Msa0240270:intron 35.0%
!! AATGATAGTGGAAGGATTTC+AGG - chr2_2:15061970-15061989 Msa0240270:intron 35.0%
! AGATTTGGTAATCATGCCTT+TGG + chr2_2:15062181-15062200 None:intergenic 35.0%
CTTTACATTTCTGCAGAATC+TGG - chr2_2:15062219-15062238 Msa0240270:intron 35.0%
! TAAGCGTTGCTGATATCATA+GGG - chr2_2:15062434-15062453 Msa0240270:intron 35.0%
! TGAACTACTATTTTCTCTCC+AGG - chr2_2:15062547-15062566 Msa0240270:intron 35.0%
TATGTTTGCATAGTAATGCC+TGG + chr2_2:15062568-15062587 None:intergenic 35.0%
TTGCTAGGTATCATAGCATA+CGG + chr2_2:15062629-15062648 None:intergenic 35.0%
TTTCCTCATCAATACAAAGG+AGG - chr2_2:15062833-15062852 Msa0240270:intron 35.0%
TTCCTCATCAATACAAAGGA+GGG - chr2_2:15062834-15062853 Msa0240270:intron 35.0%
TGATCTATCTGTGACTTTGT+AGG - chr2_2:15062869-15062888 Msa0240270:intron 35.0%
! AAGTACTCTTTTTCCTCTGA+AGG + chr2_2:15062969-15062988 None:intergenic 35.0%
CTTGCTTTAATGCCTTGATT+TGG - chr2_2:15063016-15063035 Msa0240270:intron 35.0%
AAGGTATACAGTTGCACTTT+AGG - chr2_2:15063258-15063277 Msa0240270:CDS 35.0%
AAAGTAGTGACAAATGACCA+AGG + chr2_2:15063307-15063326 None:intergenic 35.0%
! CTTTGTGTGTATTTGATAGC+TGG - chr2_2:15063323-15063342 Msa0240270:intron 35.0%
!! ATCCAAAATCTTTAGGTTGG+TGG + chr2_2:15063575-15063594 None:intergenic 35.0%
GAATGTTTCTTTGAACGTCT+GGG + chr2_2:15063711-15063730 None:intergenic 35.0%
TGAATGTTTCTTTGAACGTC+TGG + chr2_2:15063712-15063731 None:intergenic 35.0%
CTGATCTTGAAAATGCACAA+TGG + chr2_2:15063791-15063810 None:intergenic 35.0%
TTGAGATTACCAAGGACATT+CGG + chr2_2:15063844-15063863 None:intergenic 35.0%
CCAGCATAAAAGTTAACAGA+CGG + chr2_2:15063934-15063953 None:intergenic 35.0%
! CGTCTGTTAACTTTTATGCT+GGG - chr2_2:15063932-15063951 Msa0240270:intron 35.0%
! GTCTGTTAACTTTTATGCTG+GGG - chr2_2:15063933-15063952 Msa0240270:intron 35.0%
! TTAACTTTTATGCTGGGGAT+TGG - chr2_2:15063938-15063957 Msa0240270:intron 35.0%
! TAACTTTTATGCTGGGGATT+GGG - chr2_2:15063939-15063958 Msa0240270:intron 35.0%
! AATCTAGTTCAAGAAGGTCT+AGG - chr2_2:15064094-15064113 Msa0240270:CDS 35.0%
! ACAAATGGTTGGTTGTAGTT+TGG - chr2_2:15064337-15064356 Msa0240270:intron 35.0%
! CAAATGGTTGGTTGTAGTTT+GGG - chr2_2:15064338-15064357 Msa0240270:intron 35.0%
! TCATTGTGTTTTGTATGCCA+TGG + chr2_2:15064566-15064585 None:intergenic 35.0%
TGCAATACTCATTGTAGTGT+GGG + chr2_2:15064652-15064671 None:intergenic 35.0%
ATGCAATACTCATTGTAGTG+TGG + chr2_2:15064653-15064672 None:intergenic 35.0%
! CACTACAATGAGTATTGCAT+CGG - chr2_2:15064653-15064672 Msa0240270:intron 35.0%
AAGAGGAAACTTATGCAATC+AGG + chr2_2:15064688-15064707 None:intergenic 35.0%
AGATATACTACTCCATATGG+AGG + chr2_2:15064816-15064835 None:intergenic 35.0%
GCAAGATATACTACTCCATA+TGG + chr2_2:15064819-15064838 None:intergenic 35.0%
AGAAATGTGTTAGATGAGGA+GGG - chr2_2:15064888-15064907 Msa0240270:intron 35.0%
!!! TTTTGGAGTGCATTTGGTTA+AGG - chr2_2:15064914-15064933 Msa0240270:intron 35.0%
AGTGCATTTGGTTAAGGATT+TGG - chr2_2:15064920-15064939 Msa0240270:intron 35.0%
! GTTTTGCATACTCATATCGT+TGG - chr2_2:15065178-15065197 Msa0240270:intron 35.0%
GAAACTATCCTTTCTGGATT+TGG - chr2_2:15065251-15065270 Msa0240270:intron 35.0%
TAGAAGATCCAAATCCAGAA+AGG + chr2_2:15065262-15065281 None:intergenic 35.0%
ACCTAACTCTCTCTGAATTC+AGG - chr2_2:15060366-15060385 Msa0240270:three_prime_UTR 40.0%
ACCTGAATTCAGAGAGAGTT+AGG + chr2_2:15060370-15060389 None:intergenic 40.0%
TTCATGGACGATTGTCCAAA+AGG + chr2_2:15061152-15061171 None:intergenic 40.0%
!! CAACCCGATAATGATTTGGT+CGG + chr2_2:15061187-15061206 None:intergenic 40.0%
!! AGCATTGTGAAAGTATTGCC+GGG + chr2_2:15061515-15061534 None:intergenic 40.0%
ATACTTTCACAATGCTTGCC+TGG - chr2_2:15061519-15061538 Msa0240270:CDS 40.0%
GCGAGATGAATAGATTTCTC+GGG + chr2_2:15061588-15061607 None:intergenic 40.0%
AGTGGAGATTCTTCCTTCAA+AGG - chr2_2:15061617-15061636 Msa0240270:CDS 40.0%
! ATAGTGGAAGGATTTCAGGT+TGG - chr2_2:15061974-15061993 Msa0240270:intron 40.0%
AATGTGAGATGTCATGCAGT+TGG - chr2_2:15062084-15062103 Msa0240270:intron 40.0%
AGAATCGTATTCGGCAGATT+TGG + chr2_2:15062196-15062215 None:intergenic 40.0%
! GTAAGCGTTGCTGATATCAT+AGG - chr2_2:15062433-15062452 Msa0240270:intron 40.0%
GTTGCTGATATCATAGGGTT+CGG - chr2_2:15062439-15062458 Msa0240270:intron 40.0%
AGAGACAATATCCTCAAGAC+TGG - chr2_2:15062468-15062487 Msa0240270:CDS 40.0%
ACAATATCCTCAAGACTGGA+TGG - chr2_2:15062472-15062491 Msa0240270:CDS 40.0%
AAGGAAAAGGACAACCCTTA+AGG - chr2_2:15062666-15062685 Msa0240270:intron 40.0%
!! CACAAATTGGCTTTGTAGGT+TGG + chr2_2:15062728-15062747 None:intergenic 40.0%
!! CTGACACAAATTGGCTTTGT+AGG + chr2_2:15062732-15062751 None:intergenic 40.0%
TCCTCATCAATACAAAGGAG+GGG - chr2_2:15062835-15062854 Msa0240270:intron 40.0%
TTGTAGGCTATCCAAAATCC+TGG - chr2_2:15062885-15062904 Msa0240270:intron 40.0%
TCAGGAATGAGATTCGTGAT+GGG - chr2_2:15062936-15062955 Msa0240270:intron 40.0%
!! CAGAGGAAAAAGAGTACTTG+AGG - chr2_2:15062970-15062989 Msa0240270:intron 40.0%
TTCAAGCAAGCAAAGATTCC+AGG + chr2_2:15063240-15063259 None:intergenic 40.0%
TGGAATCTTTGCTTGCTTGA+AGG - chr2_2:15063239-15063258 Msa0240270:CDS 40.0%
! TGCTCATTTTCTCCTTTCCT+TGG - chr2_2:15063287-15063306 Msa0240270:intron 40.0%
AGTGACAAATGACCAAGGAA+AGG + chr2_2:15063302-15063321 None:intergenic 40.0%
! CATCTTGTTTGTGTAGGTGT+TGG - chr2_2:15063362-15063381 Msa0240270:intron 40.0%
! CTTGGGAAGGCATAAAAAGA+AGG + chr2_2:15063491-15063510 None:intergenic 40.0%
! TGCCACCAACCTAAAGATTT+TGG - chr2_2:15063570-15063589 Msa0240270:intron 40.0%
TCTTTGAACGTCTGGGAAAA+AGG + chr2_2:15063704-15063723 None:intergenic 40.0%
! CCGTCTGTTAACTTTTATGC+TGG - chr2_2:15063931-15063950 Msa0240270:intron 40.0%
AATGAGTTTGAGCTTCTCTG+AGG - chr2_2:15064020-15064039 Msa0240270:intron 40.0%
!! CTTCTCTGAGGAAGACTTTT+TGG - chr2_2:15064032-15064051 Msa0240270:intron 40.0%
! GAGGAAGACTTTTTGGATGT+AGG - chr2_2:15064039-15064058 Msa0240270:intron 40.0%
! GACACGAATCTAGTTCAAGA+AGG - chr2_2:15064088-15064107 Msa0240270:CDS 40.0%
GCTGTATGCTCTCATTAAGA+AGG - chr2_2:15064230-15064249 Msa0240270:intron 40.0%
GATGACATGACAATACGTAG+AGG + chr2_2:15064450-15064469 None:intergenic 40.0%
TCACCGTCTAAGTATGCAAT+CGG - chr2_2:15064491-15064510 Msa0240270:intron 40.0%
! TCACCGATTGCATACTTAGA+CGG + chr2_2:15064497-15064516 None:intergenic 40.0%
! GGCAATAAGTTGAAACACCA+TGG - chr2_2:15064546-15064565 Msa0240270:intron 40.0%
AATACTCATTGTAGTGTGGG+TGG + chr2_2:15064649-15064668 None:intergenic 40.0%
! TACAATGAGTATTGCATCGG+TGG - chr2_2:15064656-15064675 Msa0240270:intron 40.0%
CCAACATAGTGCTTCTTAGT+TGG + chr2_2:15064843-15064862 None:intergenic 40.0%
!! CCAACTAAGAAGCACTATGT+TGG - chr2_2:15064840-15064859 Msa0240270:intron 40.0%
!! CACTATGTTGGCTTTAGCAA+TGG - chr2_2:15064852-15064871 Msa0240270:intron 40.0%
GCTGAGAAATGTGTTAGATG+AGG - chr2_2:15064884-15064903 Msa0240270:intron 40.0%
GAGAAATGTGTTAGATGAGG+AGG - chr2_2:15064887-15064906 Msa0240270:intron 40.0%
!!! TTAGATGAGGAGGGCATTTT+TGG - chr2_2:15064897-15064916 Msa0240270:intron 40.0%
ATTTGGCTGACAGAGATATC+TGG - chr2_2:15064937-15064956 Msa0240270:intron 40.0%
TCAGTGCAAAGCAATCTCAT+CGG - chr2_2:15065152-15065171 Msa0240270:intron 40.0%
! ATCAACCACTGGATTAGGAA+AGG + chr2_2:15065315-15065334 None:intergenic 40.0%
TCGGTATTTGGCGACATTCA+TGG + chr2_2:15061168-15061187 None:intergenic 45.0%
GAATCGCAAGAATCAACACG+CGG + chr2_2:15061222-15061241 None:intergenic 45.0%
!! GCATTGTGAAAGTATTGCCG+GGG + chr2_2:15061514-15061533 None:intergenic 45.0%
!! TCGATGGCGGAAGATGAAAA+TGG + chr2_2:15061651-15061670 None:intergenic 45.0%
!! ATTGTTTAGGGGTGTCTCGA+TGG + chr2_2:15061667-15061686 None:intergenic 45.0%
TTTCACACTGACAAGGAAGC+TGG - chr2_2:15061812-15061831 Msa0240270:CDS 45.0%
TTCACACTGACAAGGAAGCT+GGG - chr2_2:15061813-15061832 Msa0240270:CDS 45.0%
TGAAGGGTGGCATAATCAGA+TGG - chr2_2:15061896-15061915 Msa0240270:CDS 45.0%
TGCAGTTGGCAAACAACTAC+AGG - chr2_2:15062098-15062117 Msa0240270:intron 45.0%
TCCTGTCTTAAACCTCCTAC+AGG - chr2_2:15062405-15062424 Msa0240270:intron 45.0%
CCTGTCTTAAACCTCCTACA+GGG - chr2_2:15062406-15062425 Msa0240270:intron 45.0%
CAACGCTTACTATTCCCTGT+AGG + chr2_2:15062423-15062442 None:intergenic 45.0%
GTACATACCATCCAGTCTTG+AGG + chr2_2:15062482-15062501 None:intergenic 45.0%
! ATGGAACTGGACCAGGATTT+TGG + chr2_2:15062899-15062918 None:intergenic 45.0%
ACTGACAAGATCGATGGAAC+TGG + chr2_2:15062912-15062931 None:intergenic 45.0%
GAGAACACTGACAAGATCGA+TGG + chr2_2:15062918-15062937 None:intergenic 45.0%
TCGATCTTGTCAGTGTTCTC+AGG - chr2_2:15062918-15062937 Msa0240270:intron 45.0%
CTCAGGAATGAGATTCGTGA+TGG - chr2_2:15062935-15062954 Msa0240270:intron 45.0%
ATAGTTGCAACTGAGCTGCA+CGG + chr2_2:15063211-15063230 None:intergenic 45.0%
AGTTGCAACTATGGACTTCC+TGG - chr2_2:15063219-15063238 Msa0240270:intron 45.0%
! AAGGTGAAAGCACAGTGCAT+TGG + chr2_2:15063472-15063491 None:intergenic 45.0%
AAGTTGGATGGAACTTGGGA+AGG + chr2_2:15063504-15063523 None:intergenic 45.0%
! CGACAAGTTGGATGGAACTT+GGG + chr2_2:15063508-15063527 None:intergenic 45.0%
ACAACTGTACCGAATGTCCT+TGG - chr2_2:15063832-15063851 Msa0240270:intron 45.0%
! GAGCTTGCTTGAGATTACCA+AGG + chr2_2:15063852-15063871 None:intergenic 45.0%
ATCTCAAGCAAGCTCGTGAT+AGG - chr2_2:15063857-15063876 Msa0240270:intron 45.0%
AGTCTGCCTTGAAGGAGTAA+GGG + chr2_2:15063905-15063924 None:intergenic 45.0%
TTCACAGTAGACAACACGCT+AGG + chr2_2:15063973-15063992 None:intergenic 45.0%
GAGAAGCTCAAACTCATTCC+AGG + chr2_2:15064018-15064037 None:intergenic 45.0%
GATGTAGGTAGTAGCCAAGA+TGG - chr2_2:15064054-15064073 Msa0240270:intron 45.0%
AGCCAAGATGGTAGCATCAT+TGG - chr2_2:15064066-15064085 Msa0240270:intron 45.0%
GTCCAATGATGCTACCATCT+TGG + chr2_2:15064071-15064090 None:intergenic 45.0%
AGAAGGTCTAGGAAACTCTC+AGG - chr2_2:15064105-15064124 Msa0240270:CDS 45.0%
AGCATGGGAAAGAGCTAATG+AGG - chr2_2:15064134-15064153 Msa0240270:CDS 45.0%
AAGAGCTAATGAGGCAGATC+AGG - chr2_2:15064143-15064162 Msa0240270:CDS 45.0%
AGAGCTAATGAGGCAGATCA+GGG - chr2_2:15064144-15064163 Msa0240270:CDS 45.0%
! ATGGTTGGTTGTAGTTTGGG+CGG - chr2_2:15064341-15064360 Msa0240270:intron 45.0%
! TCACTGCGTTTTGTATGCCA+TGG - chr2_2:15064422-15064441 Msa0240270:intron 45.0%
CAGTGTATAAGGCCTCCATA+TGG - chr2_2:15064801-15064820 Msa0240270:intron 45.0%
!!! GGGCATTTTTGGAGTGCATT+TGG - chr2_2:15064908-15064927 Msa0240270:intron 45.0%
TCTCTCCTTTCCTAATCCAG+TGG - chr2_2:15065307-15065326 Msa0240270:intron 45.0%
GGTAAAATGGACAACGTGAG+AGG - chr2_2:15065395-15065414 Msa0240270:five_prime_UTR 45.0%
!! TAAATAAAAAACAAAAATTA+AGG + chr2_2:15060422-15060441 None:intergenic 5.0%
!!! TTATAAACAATTTTTTTTAT+GGG + chr2_2:15065342-15065361 None:intergenic 5.0%
!!! TTTATAAACAATTTTTTTTA+TGG + chr2_2:15065343-15065362 None:intergenic 5.0%
GAAGGAAGAATCTCCACTGC+TGG + chr2_2:15061615-15061634 None:intergenic 50.0%
!! TTTGCCCACTTTTGGGTGAC+TGG - chr2_2:15061745-15061764 Msa0240270:CDS 50.0%
!! TTGCCCACTTTTGGGTGACT+GGG - chr2_2:15061746-15061765 Msa0240270:CDS 50.0%
TCACACTGACAAGGAAGCTG+GGG - chr2_2:15061814-15061833 Msa0240270:CDS 50.0%
! CCCTGTAGGAGGTTTAAGAC+AGG + chr2_2:15062409-15062428 None:intergenic 50.0%
CGCTTACTATTCCCTGTAGG+AGG + chr2_2:15062420-15062439 None:intergenic 50.0%
GCTGATATCATAGGGTTCGG+TGG - chr2_2:15062442-15062461 Msa0240270:intron 50.0%
! GCCCCTCCTTTGTATTGATG+AGG + chr2_2:15062839-15062858 None:intergenic 50.0%
AAGATCGATGGAACTGGACC+AGG + chr2_2:15062906-15062925 None:intergenic 50.0%
GATGGGCAATTGACCTTCAG+AGG - chr2_2:15062953-15062972 Msa0240270:intron 50.0%
GTGCAGCTCAGTTGCAACTA+TGG - chr2_2:15063210-15063229 Msa0240270:intron 50.0%
! GCGACAAGTTGGATGGAACT+TGG + chr2_2:15063509-15063528 None:intergenic 50.0%
CTTTCGTCAACGCGACAAGT+TGG + chr2_2:15063520-15063539 None:intergenic 50.0%
AGTCTCCCCTTACTCCTTCA+AGG - chr2_2:15063896-15063915 Msa0240270:intron 50.0%
GTCTGCCTTGAAGGAGTAAG+GGG + chr2_2:15063904-15063923 None:intergenic 50.0%
GAGTCTGCCTTGAAGGAGTA+AGG + chr2_2:15063906-15063925 None:intergenic 50.0%
GATGGATATGAAGCGACACC+TGG - chr2_2:15063997-15064016 Msa0240270:intron 50.0%
AACTCTCAGGAAGTCGAGCA+TGG - chr2_2:15064118-15064137 Msa0240270:CDS 50.0%
ACTCTCAGGAAGTCGAGCAT+GGG - chr2_2:15064119-15064138 Msa0240270:CDS 50.0%
GAGCTAATGAGGCAGATCAG+GGG - chr2_2:15064145-15064164 Msa0240270:CDS 50.0%
AGCTAATGAGGCAGATCAGG+GGG - chr2_2:15064146-15064165 Msa0240270:CDS 50.0%
!! GACAATACGTAGAGGCACCA+TGG + chr2_2:15064442-15064461 None:intergenic 50.0%
GGTCGATCAACCACTGGATT+AGG + chr2_2:15065320-15065339 None:intergenic 50.0%
TTATGGGGTCGATCAACCAC+TGG + chr2_2:15065326-15065345 None:intergenic 50.0%
ATCAACTGCAATGCGTGCCC+CGG - chr2_2:15061494-15061513 Msa0240270:CDS 55.0%
! TTCCATGATCGCGAGGCACT+AGG + chr2_2:15061545-15061564 None:intergenic 55.0%
CTGAGACTTCCATGATCGCG+AGG + chr2_2:15061552-15061571 None:intergenic 55.0%
TCATCTCGCATCACCAGCAG+TGG - chr2_2:15061599-15061618 Msa0240270:CDS 55.0%
!! GTTTAGGGGTGTCTCGATGG+CGG + chr2_2:15061664-15061683 None:intergenic 55.0%
!! TGCCCACTTTTGGGTGACTG+GGG - chr2_2:15061747-15061766 Msa0240270:CDS 55.0%
TCCCCCAGTCACCCAAAAGT+GGG + chr2_2:15061752-15061771 None:intergenic 55.0%
TTCCCCCAGTCACCCAAAAG+TGG + chr2_2:15061753-15061772 None:intergenic 55.0%
GCAGGCGTTTCACACTGACA+AGG - chr2_2:15061805-15061824 Msa0240270:CDS 55.0%
! CGTCAACGCGACAAGTTGGA+TGG + chr2_2:15063516-15063535 None:intergenic 55.0%
GAAGGAGTAAGGGGAGACTC+TGG + chr2_2:15063895-15063914 None:intergenic 55.0%
GGTGCAAGAGTCTGCCTTGA+AGG + chr2_2:15063913-15063932 None:intergenic 55.0%
AATGAGGCAGATCAGGGGGA+TGG - chr2_2:15064150-15064169 Msa0240270:CDS 55.0%
!! GCCCACTTTTGGGTGACTGG+GGG - chr2_2:15061748-15061767 Msa0240270:CDS 60.0%
! TGATCGCGAGGCACTAGGCC+AGG + chr2_2:15061540-15061559 None:intergenic 65.0%
GGCCTAGTGCCTCGCGATCA+TGG - chr2_2:15061540-15061559 Msa0240270:CDS 65.0%
GAGGCAGATCAGGGGGATGG+TGG - chr2_2:15064153-15064172 Msa0240270:CDS 65.0%
Chromosome Type Strat End Strand Name
chr2_2 gene 15060274 15065440 15060274 ID=Msa0240270;Name=Msa0240270
chr2_2 mRNA 15060274 15065440 15060274 ID=Msa0240270-mRNA-1;Parent=Msa0240270;Name=Msa0240270-mRNA-1;_AED=0.07;_eAED=0.07;_QI=148|1|1|1|0.75|0.66|9|442|346
chr2_2 exon 15060274 15060438 15060274 ID=Msa0240270-mRNA-1:exon:6254;Parent=Msa0240270-mRNA-1
chr2_2 exon 15060460 15060910 15060460 ID=Msa0240270-mRNA-1:exon:6253;Parent=Msa0240270-mRNA-1
chr2_2 exon 15061463 15061933 15061463 ID=Msa0240270-mRNA-1:exon:6252;Parent=Msa0240270-mRNA-1
chr2_2 exon 15062454 15062498 15062454 ID=Msa0240270-mRNA-1:exon:6251;Parent=Msa0240270-mRNA-1
chr2_2 exon 15062723 15062823 15062723 ID=Msa0240270-mRNA-1:exon:6250;Parent=Msa0240270-mRNA-1
chr2_2 exon 15063221 15063287 15063221 ID=Msa0240270-mRNA-1:exon:6249;Parent=Msa0240270-mRNA-1
chr2_2 exon 15063858 15063905 15063858 ID=Msa0240270-mRNA-1:exon:6248;Parent=Msa0240270-mRNA-1
chr2_2 exon 15064076 15064244 15064076 ID=Msa0240270-mRNA-1:exon:6247;Parent=Msa0240270-mRNA-1
chr2_2 exon 15065327 15065440 15065327 ID=Msa0240270-mRNA-1:exon:6246;Parent=Msa0240270-mRNA-1
chr2_2 five_prime_UTR 15065327 15065440 15065327 ID=Msa0240270-mRNA-1:five_prime_utr;Parent=Msa0240270-mRNA-1
chr2_2 five_prime_UTR 15064211 15064244 15064211 ID=Msa0240270-mRNA-1:five_prime_utr;Parent=Msa0240270-mRNA-1
chr2_2 CDS 15064076 15064210 15064076 ID=Msa0240270-mRNA-1:cds;Parent=Msa0240270-mRNA-1
chr2_2 CDS 15063858 15063905 15063858 ID=Msa0240270-mRNA-1:cds;Parent=Msa0240270-mRNA-1
chr2_2 CDS 15063221 15063287 15063221 ID=Msa0240270-mRNA-1:cds;Parent=Msa0240270-mRNA-1
chr2_2 CDS 15062723 15062823 15062723 ID=Msa0240270-mRNA-1:cds;Parent=Msa0240270-mRNA-1
chr2_2 CDS 15062454 15062498 15062454 ID=Msa0240270-mRNA-1:cds;Parent=Msa0240270-mRNA-1
chr2_2 CDS 15061463 15061933 15061463 ID=Msa0240270-mRNA-1:cds;Parent=Msa0240270-mRNA-1
chr2_2 CDS 15060737 15060910 15060737 ID=Msa0240270-mRNA-1:cds;Parent=Msa0240270-mRNA-1
chr2_2 three_prime_UTR 15060460 15060736 15060460 ID=Msa0240270-mRNA-1:three_prime_utr;Parent=Msa0240270-mRNA-1
chr2_2 three_prime_UTR 15060274 15060438 15060274 ID=Msa0240270-mRNA-1:three_prime_utr;Parent=Msa0240270-mRNA-1
Gene Sequence

>Msa0240270

ATGCGTGCCCCGGCAATACTTTCACAATGCTTGCCTGGCCTAGTGCCTCGCGATCATGGAAGTCTCAGTATATCGTCTGTTCCCGAGAAATCTATTCATCTCGCATCACCAGCAGTGGAGATTCTTCCTTCAAAGGCGTTTCACACTGACAAGGAAGCTGGGGAAAATACTGACCATTTTAAGGGAATAGTAAGCGTTGCTGATATCATAGGGTTCGGTGGTTCAGAGACAATATCCTCAAGACTGGATGGCTATCCAAAATCCTGGTCCAGTTCCATCGATCTTGTCAGTGTTCTCAGGAATGAGATTCGTGATGGGCAATTGACCTTCAGAGGAAAAAGAGTACTTGAGCTCAGTTGCAACTATGGACTTCCTGGAATCTTTGCTTGCTTGAAGGGAGCTTCCATTGTGCATTTTCAAGATCAGAATGCTGAAACTGTAAGATGCACAACTGTACCGAATGTCCTTGGTAATCTCAAGCAAGCTCGTGATAGGCAGAGTCGACAGCCAGAGTCTCCCCTTACTCCTTCAAGGCAGACTCTTGCACCGTCTGTTAACTTTTATGCTGGGGATTGGGAAGAATTACCTAGCGTGTTGTCTACTGTGAAAAATGATGGATATGAAGCGACACCTGGAATGAGTTTGAGCTTCTCTGAGGAAGACTTTTTGGATGTAGGTAGTAGCCAAGATGGTAGCATCATTGGACACGAATCTAGTTCAAGAAGGTCTAGGAAACTCTCAGGAAGTCGAGCATGGGAAAGAGCTAATGAGGCAGATCAGGGGGATGGTGGCTATGATGTTATTTTAATGACTGAGATTCCATACTCTGTTAACTCTTTGAAGAAGCTGTATGCTCTCATTAAGAAGTGTATAAGGCCTCCATATGGAGTAGTATATCTTGCTCCAACTAAGAAGCACTATGTTGGCTTTAGCAATGGAGTAAGACAGCTGAGAAATGTGTTAGATGAGGAGGGCATTTTTGGAGTGCATTTGGTTAAGGATTTGGCTGACAGAGATATCTGGAAGTTGTTTCACAAGTGA

Protein sequence

>Msa0240270

MRAPAILSQCLPGLVPRDHGSLSISSVPEKSIHLASPAVEILPSKAFHTDKEAGENTDHFKGIVSVADIIGFGGSETISSRLDGYPKSWSSSIDLVSVLRNEIRDGQLTFRGKRVLELSCNYGLPGIFACLKGASIVHFQDQNAETVRCTTVPNVLGNLKQARDRQSRQPESPLTPSRQTLAPSVNFYAGDWEELPSVLSTVKNDGYEATPGMSLSFSEEDFLDVGSSQDGSIIGHESSSRRSRKLSGSRAWERANEADQGDGGYDVILMTEIPYSVNSLKKLYALIKKCIRPPYGVVYLAPTKKHYVGFSNGVRQLRNVLDEEGIFGVHLVKDLADRDIWKLFHK*