Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898320 | XP_039683138.1 | 91.684 | 493 | 36 | 1 | 1 | 488 | 1 | 493 | 0.0 | 941 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898320 | sp|Q9C9T2|SARD1_ARATH | 49.375 | 480 | 206 | 12 | 1 | 473 | 1 | 450 | 1.03e-144 | 425 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898320 | A0A396HLL0 | 91.684 | 493 | 36 | 1 | 1 | 488 | 1 | 493 | 0.0 | 941 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001380 | Msa0898320 | 0.838428 | 2.893113e-57 | -8.615850e-47 |
| Msa0009340 | Msa0898320 | 0.803324 | 3.681502e-49 | -8.615850e-47 |
| Msa0012710 | Msa0898320 | 0.806644 | 7.440624e-50 | -8.615850e-47 |
| Msa0017320 | Msa0898320 | 0.807882 | 4.068529e-50 | -8.615850e-47 |
| Msa0026630 | Msa0898320 | 0.803406 | 3.540211e-49 | -8.615850e-47 |
| Msa0041150 | Msa0898320 | 0.804357 | 2.246024e-49 | -8.615850e-47 |
| Msa0042550 | Msa0898320 | 0.802541 | 5.342347e-49 | -8.615850e-47 |
| Msa0061500 | Msa0898320 | 0.818046 | 2.404388e-52 | -8.615850e-47 |
| Msa0064140 | Msa0898320 | 0.821733 | 3.451545e-53 | -8.615850e-47 |
| Msa0081620 | Msa0898320 | 0.813403 | 2.605500e-51 | -8.615850e-47 |
| Msa0092410 | Msa0898320 | 0.862219 | 5.915232e-64 | -8.615850e-47 |
| Msa0106530 | Msa0898320 | 0.802198 | 6.286651e-49 | -8.615850e-47 |
| Msa0613340 | Msa0898320 | 0.819711 | 1.006419e-52 | -8.615850e-47 |
| Msa0614920 | Msa0898320 | 0.837573 | 4.798563e-57 | -8.615850e-47 |
| Msa0622170 | Msa0898320 | -0.801016 | 1.098284e-48 | -8.615850e-47 |
| Msa0631330 | Msa0898320 | 0.813054 | 3.108377e-51 | -8.615850e-47 |
| Msa0638990 | Msa0898320 | 0.810556 | 1.086865e-50 | -8.615850e-47 |
| Msa0641340 | Msa0898320 | 0.812608 | 3.892503e-51 | -8.615850e-47 |
| Msa0653440 | Msa0898320 | 0.801871 | 7.337659e-49 | -8.615850e-47 |
| Msa0661720 | Msa0898320 | 0.802111 | 6.550376e-49 | -8.615850e-47 |
| Msa0667740 | Msa0898320 | 0.810640 | 1.042409e-50 | -8.615850e-47 |
| Msa0679550 | Msa0898320 | 0.809749 | 1.622629e-50 | -8.615850e-47 |
| Msa0689780 | Msa0898320 | 0.835876 | 1.300190e-56 | -8.615850e-47 |
| Msa0695870 | Msa0898320 | 0.813184 | 2.910405e-51 | -8.615850e-47 |
| Msa0705990 | Msa0898320 | 0.821476 | 3.956781e-53 | -8.615850e-47 |
| Msa0708310 | Msa0898320 | 0.836608 | 8.471108e-57 | -8.615850e-47 |
| Msa0713380 | Msa0898320 | 0.815502 | 8.945224e-52 | -8.615850e-47 |
| Msa0721340 | Msa0898320 | 0.842447 | 2.572383e-58 | -8.615850e-47 |
| Msa0731180 | Msa0898320 | 0.809716 | 1.648793e-50 | -8.615850e-47 |
| Msa0741070 | Msa0898320 | 0.823448 | 1.377379e-53 | -8.615850e-47 |
| Msa0742150 | Msa0898320 | 0.846649 | 1.901838e-59 | -8.615850e-47 |
| Msa0749440 | Msa0898320 | 0.811698 | 6.146053e-51 | -8.615850e-47 |
| Msa0750810 | Msa0898320 | 0.801924 | 7.155909e-49 | -8.615850e-47 |
| Msa0764920 | Msa0898320 | 0.800800 | 1.215717e-48 | -8.615850e-47 |
| Msa0771580 | Msa0898320 | 0.817249 | 3.636726e-52 | -8.615850e-47 |
| Msa0771950 | Msa0898320 | 0.801663 | 8.098115e-49 | -8.615850e-47 |
| Msa0779260 | Msa0898320 | 0.801936 | 7.117617e-49 | -8.615850e-47 |
| Msa0786070 | Msa0898320 | 0.813906 | 2.019200e-51 | -8.615850e-47 |
| Msa0796770 | Msa0898320 | 0.805120 | 1.556116e-49 | -8.615850e-47 |
| Msa0798010 | Msa0898320 | 0.805343 | 1.397747e-49 | -8.615850e-47 |
| Msa0805910 | Msa0898320 | 0.832347 | 9.955683e-56 | -8.615850e-47 |
| Msa0805920 | Msa0898320 | 0.828984 | 6.635214e-55 | -8.615850e-47 |
| Msa0809140 | Msa0898320 | 0.810333 | 1.214201e-50 | -8.615850e-47 |
| Msa0812950 | Msa0898320 | 0.815776 | 7.773584e-52 | -8.615850e-47 |
| Msa0823440 | Msa0898320 | 0.835050 | 2.101946e-56 | -8.615850e-47 |
| Msa0825870 | Msa0898320 | 0.803132 | 4.033349e-49 | -8.615850e-47 |
| Msa0831850 | Msa0898320 | 0.814710 | 1.340904e-51 | -8.615850e-47 |
| Msa0836870 | Msa0898320 | 0.819757 | 9.820818e-53 | -8.615850e-47 |
| Msa0138020 | Msa0898320 | 0.826415 | 2.746696e-54 | -8.615850e-47 |
| Msa0152560 | Msa0898320 | 0.838609 | 2.597179e-57 | -8.615850e-47 |
| Msa0178510 | Msa0898320 | 0.805049 | 1.610327e-49 | -8.615850e-47 |
| Msa0186320 | Msa0898320 | 0.819203 | 1.313736e-52 | -8.615850e-47 |
| Msa0187310 | Msa0898320 | 0.822982 | 1.770253e-53 | -8.615850e-47 |
| Msa0187830 | Msa0898320 | 0.839428 | 1.594195e-57 | -8.615850e-47 |
| Msa0189610 | Msa0898320 | 0.829751 | 4.320178e-55 | -8.615850e-47 |
| Msa0190530 | Msa0898320 | 0.803206 | 3.892996e-49 | -8.615850e-47 |
| Msa0200850 | Msa0898320 | 0.826749 | 2.286778e-54 | -8.615850e-47 |
| Msa0201530 | Msa0898320 | 0.837858 | 4.055151e-57 | -8.615850e-47 |
| Msa0201570 | Msa0898320 | 0.842781 | 2.096187e-58 | -8.615850e-47 |
| Msa0202580 | Msa0898320 | 0.800793 | 1.220159e-48 | -8.615850e-47 |
| Msa0204840 | Msa0898320 | 0.822916 | 1.834118e-53 | -8.615850e-47 |
| Msa0222870 | Msa0898320 | 0.807890 | 4.052947e-50 | -8.615850e-47 |
| Msa0222980 | Msa0898320 | 0.808984 | 2.367274e-50 | -8.615850e-47 |
| Msa0236070 | Msa0898320 | 0.815440 | 9.237404e-52 | -8.615850e-47 |
| Msa0364790 | Msa0898320 | 0.849539 | 3.030485e-60 | -8.615850e-47 |
| Msa0371950 | Msa0898320 | 0.839552 | 1.480068e-57 | -8.615850e-47 |
| Msa0393620 | Msa0898320 | 0.800068 | 1.713781e-48 | -8.615850e-47 |
| Msa0397250 | Msa0898320 | 0.812049 | 5.153794e-51 | -8.615850e-47 |
| Msa0397270 | Msa0898320 | 0.819536 | 1.103322e-52 | -8.615850e-47 |
| Msa0398200 | Msa0898320 | 0.803925 | 2.762057e-49 | -8.615850e-47 |
| Msa0408340 | Msa0898320 | 0.809229 | 2.097538e-50 | -8.615850e-47 |
| Msa0410580 | Msa0898320 | 0.817862 | 2.645265e-52 | -8.615850e-47 |
| Msa0422180 | Msa0898320 | 0.837749 | 4.325579e-57 | -8.615850e-47 |
| Msa0423860 | Msa0898320 | 0.823176 | 1.594878e-53 | -8.615850e-47 |
| Msa0426560 | Msa0898320 | 0.807613 | 4.641457e-50 | -8.615850e-47 |
| Msa0456770 | Msa0898320 | 0.806024 | 1.005696e-49 | -8.615850e-47 |
| Msa0481280 | Msa0898320 | 0.801861 | 7.373651e-49 | -8.615850e-47 |
| Msa0240270 | Msa0898320 | 0.842461 | 2.549718e-58 | -8.615850e-47 |
| Msa0243480 | Msa0898320 | 0.800798 | 1.217196e-48 | -8.615850e-47 |
| Msa0244140 | Msa0898320 | 0.864763 | 9.623475e-65 | -8.615850e-47 |
| Msa0244190 | Msa0898320 | 0.882347 | 1.124062e-70 | -8.615850e-47 |
| Msa0264310 | Msa0898320 | 0.804558 | 2.039617e-49 | -8.615850e-47 |
| Msa0269560 | Msa0898320 | 0.843490 | 1.356856e-58 | -8.615850e-47 |
| Msa0271550 | Msa0898320 | 0.852391 | 4.760286e-61 | -8.615850e-47 |
| Msa0277410 | Msa0898320 | 0.815070 | 1.116011e-51 | -8.615850e-47 |
| Msa0281930 | Msa0898320 | 0.802043 | 6.765016e-49 | -8.615850e-47 |
| Msa0282680 | Msa0898320 | 0.824908 | 6.254870e-54 | -8.615850e-47 |
| Msa0282720 | Msa0898320 | 0.812401 | 4.320185e-51 | -8.615850e-47 |
| Msa0284450 | Msa0898320 | 0.800279 | 1.552650e-48 | -8.615850e-47 |
| Msa0307310 | Msa0898320 | 0.825911 | 3.620710e-54 | -8.615850e-47 |
| Msa0311470 | Msa0898320 | 0.820183 | 7.848183e-53 | -8.615850e-47 |
| Msa0319290 | Msa0898320 | 0.851091 | 1.111928e-60 | -8.615850e-47 |
| Msa0321080 | Msa0898320 | 0.824888 | 6.323542e-54 | -8.615850e-47 |
| Msa0322680 | Msa0898320 | 0.815559 | 8.689209e-52 | -8.615850e-47 |
| Msa0347750 | Msa0898320 | 0.815255 | 1.015287e-51 | -8.615850e-47 |
| Msa0357760 | Msa0898320 | 0.836791 | 7.607936e-57 | -8.615850e-47 |
| Msa0357790 | Msa0898320 | 0.832799 | 7.691731e-56 | -8.615850e-47 |
| Msa0357830 | Msa0898320 | 0.854199 | 1.443180e-61 | -8.615850e-47 |
| Msa0357840 | Msa0898320 | 0.851830 | 6.870606e-61 | -8.615850e-47 |
| Msa0357870 | Msa0898320 | 0.826261 | 2.988685e-54 | -8.615850e-47 |
| Msa0485490 | Msa0898320 | 0.836344 | 9.884632e-57 | -8.615850e-47 |
| Msa0502780 | Msa0898320 | 0.803899 | 2.796912e-49 | -8.615850e-47 |
| Msa0517610 | Msa0898320 | 0.800102 | 1.686644e-48 | -8.615850e-47 |
| Msa0521670 | Msa0898320 | 0.801252 | 9.830418e-49 | -8.615850e-47 |
| Msa0524330 | Msa0898320 | 0.806284 | 8.863319e-50 | -8.615850e-47 |
| Msa0524440 | Msa0898320 | 0.831462 | 1.646666e-55 | -8.615850e-47 |
| Msa0525610 | Msa0898320 | 0.802688 | 4.982281e-49 | -8.615850e-47 |
| Msa0526070 | Msa0898320 | -0.812529 | 4.050669e-51 | -8.615850e-47 |
| Msa0530650 | Msa0898320 | 0.801786 | 7.637991e-49 | -8.615850e-47 |
| Msa0566750 | Msa0898320 | 0.807470 | 4.975682e-50 | -8.615850e-47 |
| Msa0574600 | Msa0898320 | 0.821717 | 3.480327e-53 | -8.615850e-47 |
| Msa0574730 | Msa0898320 | 0.807680 | 4.491322e-50 | -8.615850e-47 |
| Msa0587190 | Msa0898320 | 0.800669 | 1.293197e-48 | -8.615850e-47 |
| Msa0844110 | Msa0898320 | 0.812146 | 4.910462e-51 | -8.615850e-47 |
| Msa0849810 | Msa0898320 | 0.810909 | 9.116129e-51 | -8.615850e-47 |
| Msa0863720 | Msa0898320 | 0.819781 | 9.695838e-53 | -8.615850e-47 |
| Msa0870060 | Msa0898320 | 0.843724 | 1.175138e-58 | -8.615850e-47 |
| Msa0882400 | Msa0898320 | 0.814322 | 1.634455e-51 | -8.615850e-47 |
| Msa0894710 | Msa0898320 | 0.816911 | 4.332244e-52 | -8.615850e-47 |
| Msa0898320 | Msa0902830 | 0.832354 | 9.914242e-56 | -8.615850e-47 |
| Msa0898320 | Msa0903370 | 0.829014 | 6.522161e-55 | -8.615850e-47 |
| Msa0898320 | Msa0919530 | 0.801417 | 9.092321e-49 | -8.615850e-47 |
| Msa0898320 | Msa0921420 | 0.824314 | 8.633909e-54 | -8.615850e-47 |
| Msa0898320 | Msa0935770 | 0.836074 | 1.157827e-56 | -8.615850e-47 |
| Msa0898320 | Msa0936530 | 0.806975 | 6.336147e-50 | -8.615850e-47 |
| Msa0898320 | Msa0943190 | 0.806922 | 6.500316e-50 | -8.615850e-47 |
| Msa0898320 | Msa0964230 | 0.813692 | 2.250188e-51 | -8.615850e-47 |
| Msa0898320 | Msa0965290 | 0.801424 | 9.064628e-49 | -8.615850e-47 |
| Msa0898320 | Msa0972810 | 0.817486 | 3.216085e-52 | -8.615850e-47 |
| Msa0898320 | Msa0973600 | 0.819553 | 1.093221e-52 | -8.615850e-47 |
| Msa0898320 | Msa0982780 | 0.827493 | 1.517874e-54 | -8.615850e-47 |
| Msa0898320 | Msa0998460 | 0.837637 | 4.622628e-57 | -8.615850e-47 |
| Msa0898320 | Msa0999680 | 0.800729 | 1.257277e-48 | -8.615850e-47 |
| Msa0898320 | Msa1023300 | 0.812858 | 3.431590e-51 | -8.615850e-47 |
| Msa0898320 | Msa1026940 | 0.807900 | 4.033115e-50 | -8.615850e-47 |
| Msa0898320 | Msa1039710 | -0.806020 | 1.007262e-49 | -8.615850e-47 |
| Msa0898320 | Msa1043120 | 0.828582 | 8.299348e-55 | -8.615850e-47 |
| Msa0898320 | Msa1054840 | 0.807240 | 5.568084e-50 | -8.615850e-47 |
| Msa0898320 | Msa1054850 | 0.820027 | 8.518104e-53 | -8.615850e-47 |
| Msa0898320 | Msa1063420 | 0.802519 | 5.399083e-49 | -8.615850e-47 |
| Msa0898320 | Msa1077340 | 0.817805 | 2.724872e-52 | -8.615850e-47 |
| Msa0898320 | Msa1087990 | 0.805160 | 1.526268e-49 | -8.615850e-47 |
| Msa0898320 | Msa1093480 | 0.803234 | 3.841322e-49 | -8.615850e-47 |
| Msa0898320 | Msa1107190 | 0.805851 | 1.093250e-49 | -8.615850e-47 |
| Msa0898320 | Msa1115280 | 0.834645 | 2.659537e-56 | -8.615850e-47 |
| Msa0898320 | Msa1143020 | 0.837130 | 6.234070e-57 | -8.615850e-47 |
| Msa0898320 | Msa1144040 | 0.808932 | 2.429171e-50 | -8.615850e-47 |
| Msa0898320 | Msa1150790 | 0.805396 | 1.362421e-49 | -8.615850e-47 |
| Msa0898320 | Msa1150810 | 0.802065 | 6.695884e-49 | -8.615850e-47 |
| Msa0898320 | Msa1162060 | 0.816566 | 5.175688e-52 | -8.615850e-47 |
| Msa0898320 | Msa1171140 | 0.802477 | 5.508386e-49 | -8.615850e-47 |
| Msa0898320 | Msa1173490 | 0.810616 | 1.054768e-50 | -8.615850e-47 |
| Msa0898320 | Msa1214170 | 0.813355 | 2.669353e-51 | -8.615850e-47 |
| Msa0898320 | Msa1225100 | 0.821813 | 3.307593e-53 | -8.615850e-47 |
| Msa0898320 | Msa1229610 | 0.817658 | 2.941796e-52 | -8.615850e-47 |
| Msa0898320 | Msa1236420 | 0.811574 | 6.540259e-51 | -8.615850e-47 |
| Msa0898320 | Msa1236440 | 0.803538 | 3.322853e-49 | -8.615850e-47 |
| Msa0898320 | Msa1238690 | 0.817380 | 3.398221e-52 | -8.615850e-47 |
| Msa0898320 | Msa1246700 | 0.856791 | 2.532722e-62 | -8.615850e-47 |
| Msa0898320 | Msa1252260 | 0.801572 | 8.450446e-49 | -8.615850e-47 |
| Msa0898320 | Msa1260680 | 0.822676 | 2.085158e-53 | -8.615850e-47 |
| Msa0898320 | Msa1270660 | 0.834160 | 3.520175e-56 | -8.615850e-47 |
| Msa0898320 | Msa1270730 | 0.821976 | 3.031123e-53 | -8.615850e-47 |
| Msa0898320 | Msa1276340 | 0.803524 | 3.345475e-49 | -8.615850e-47 |
| Msa0898320 | Msa1279480 | 0.801873 | 7.332594e-49 | -8.615850e-47 |
| Msa0898320 | Msa1280150 | 0.856644 | 2.798786e-62 | -8.615850e-47 |
| Msa0898320 | Msa1291450 | 0.802239 | 6.166605e-49 | -8.615850e-47 |
| Msa0898320 | Msa1310220 | 0.825577 | 4.344649e-54 | -8.615850e-47 |
| Msa0898320 | Msa1329870 | 0.821900 | 3.157603e-53 | -8.615850e-47 |
| Msa0898320 | Msa1332050 | 0.826555 | 2.543630e-54 | -8.615850e-47 |
| Msa0898320 | Msa1335230 | 0.839785 | 1.287596e-57 | -8.615850e-47 |
| Msa0898320 | Msa1338400 | 0.810700 | 1.011918e-50 | -8.615850e-47 |
| Msa0898320 | Msa1353890 | 0.822664 | 2.099412e-53 | -8.615850e-47 |
| Msa0898320 | Msa1355890 | 0.811165 | 8.023858e-51 | -8.615850e-47 |
| Msa0898320 | Msa1360020 | 0.815075 | 1.113064e-51 | -8.615850e-47 |
| Msa0898320 | Msa1365270 | 0.858640 | 7.170004e-63 | -8.615850e-47 |
| Msa0898320 | Msa1367530 | 0.815907 | 7.269351e-52 | -8.615850e-47 |
| Msa0898320 | Msa1371940 | 0.809303 | 2.022747e-50 | -8.615850e-47 |
| Msa0898320 | Msa1372150 | 0.809831 | 1.557671e-50 | -8.615850e-47 |
| Msa0898320 | Msa1372280 | 0.801627 | 8.236213e-49 | -8.615850e-47 |
| Msa0898320 | Msa1376450 | 0.833948 | 3.975927e-56 | -8.615850e-47 |
| Msa0898320 | Msa1378040 | 0.828820 | 7.266853e-55 | -8.615850e-47 |
| Msa0898320 | Msa1378680 | 0.813854 | 2.072810e-51 | -8.615850e-47 |
| Msa0898320 | Msa1391550 | 0.804200 | 2.420978e-49 | -8.615850e-47 |
| Msa0898320 | Msa1405220 | 0.812520 | 4.068792e-51 | -8.615850e-47 |
| Msa0898320 | Msa1408050 | 0.803287 | 3.745437e-49 | -8.615850e-47 |
| Msa0898320 | Msa1408180 | 0.818785 | 1.635603e-52 | -8.615850e-47 |
| Msa0898320 | Msa1408340 | 0.824324 | 8.584422e-54 | -8.615850e-47 |
| Msa0898320 | Msa1420270 | 0.845816 | 3.207880e-59 | -8.615850e-47 |
| Msa0898320 | Msa1423820 | 0.829180 | 5.944750e-55 | -8.615850e-47 |
| Msa0898320 | Msa1424630 | 0.848415 | 6.218021e-60 | -8.615850e-47 |
| Msa0898320 | Msa1430130 | 0.813691 | 2.251950e-51 | -8.615850e-47 |
| Msa0898320 | Msa1430550 | 0.845871 | 3.098141e-59 | -8.615850e-47 |
| Msa0898320 | Msa1444260 | 0.809405 | 1.923194e-50 | -8.615850e-47 |
| Msa0898320 | Msa1448980 | 0.820800 | 5.664384e-53 | -8.615850e-47 |
| Msa0898320 | Msa1457160 | 0.832975 | 6.956351e-56 | -8.615850e-47 |
| Msa0898320 | Msa1458510 | 0.802261 | 6.102560e-49 | -8.615850e-47 |
| Msa0898320 | Msa1460750 | 0.815583 | 8.582217e-52 | -8.615850e-47 |
| Msa0898320 | Msa1462360 | 0.840879 | 6.664638e-58 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898320 | MtrunA17_Chr6g0484111 | 91.684 | 493 | 36 | 1 | 1 | 488 | 1 | 493 | 0.0 | 941 |
| Msa0898320 | MtrunA17_Chr6g0484131 | 90.669 | 493 | 33 | 2 | 1 | 488 | 1 | 485 | 0.0 | 919 |
| Msa0898320 | MtrunA17_Chr6g0484121 | 90.264 | 493 | 35 | 2 | 1 | 488 | 1 | 485 | 0.0 | 913 |
| Msa0898320 | MtrunA17_Chr8g0391221 | 63.579 | 475 | 158 | 9 | 1 | 468 | 1 | 467 | 0.0 | 595 |
| Msa0898320 | MtrunA17_Chr8g0391211 | 62.834 | 487 | 161 | 14 | 1 | 477 | 72 | 548 | 0.0 | 573 |
| Msa0898320 | MtrunA17_Chr4g0072691 | 47.165 | 388 | 192 | 7 | 27 | 409 | 3 | 382 | 1.19e-115 | 353 |
| Msa0898320 | MtrunA17_Chr4g0048161 | 47.704 | 392 | 192 | 8 | 2 | 387 | 13 | 397 | 2.09e-115 | 353 |
| Msa0898320 | MtrunA17_Chr2g0281171 | 46.310 | 393 | 199 | 7 | 1 | 387 | 12 | 398 | 2.60e-114 | 350 |
| Msa0898320 | MtrunA17_Chr2g0304831 | 42.081 | 442 | 232 | 8 | 4 | 437 | 11 | 436 | 1.27e-109 | 337 |
| Msa0898320 | MtrunA17_Chr4g0059411 | 47.368 | 304 | 152 | 7 | 14 | 315 | 9 | 306 | 3.22e-80 | 259 |
| Msa0898320 | MtrunA17_Chr7g0271691 | 35.143 | 350 | 208 | 9 | 47 | 390 | 44 | 380 | 1.69e-51 | 182 |
| Msa0898320 | MtrunA17_Chr7g0271671 | 32.915 | 398 | 239 | 14 | 1 | 378 | 1 | 390 | 4.88e-47 | 171 |
| Msa0898320 | MtrunA17_Chr7g0271681 | 35.932 | 295 | 176 | 7 | 89 | 376 | 10 | 298 | 7.06e-44 | 161 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0898320 | AT1G73805.1 | 49.375 | 480 | 206 | 12 | 1 | 473 | 1 | 450 | 1.05e-145 | 425 |
| Msa0898320 | AT5G57580.1 | 48.158 | 380 | 183 | 6 | 9 | 382 | 17 | 388 | 7.46e-116 | 355 |
| Msa0898320 | AT4G25800.1 | 47.273 | 385 | 188 | 7 | 4 | 382 | 2 | 377 | 9.11e-113 | 346 |
| Msa0898320 | AT4G25800.2 | 47.273 | 385 | 188 | 7 | 4 | 382 | 2 | 377 | 9.11e-113 | 346 |
| Msa0898320 | AT2G18750.3 | 39.754 | 488 | 268 | 12 | 4 | 472 | 16 | 496 | 3.04e-109 | 337 |
| Msa0898320 | AT2G18750.2 | 39.754 | 488 | 268 | 12 | 4 | 472 | 16 | 496 | 3.04e-109 | 337 |
| Msa0898320 | AT2G18750.1 | 39.754 | 488 | 268 | 12 | 4 | 472 | 16 | 496 | 3.04e-109 | 337 |
| Msa0898320 | AT2G24300.2 | 43.264 | 386 | 211 | 6 | 4 | 384 | 3 | 385 | 5.26e-97 | 305 |
| Msa0898320 | AT2G24300.3 | 43.264 | 386 | 211 | 6 | 4 | 384 | 7 | 389 | 6.02e-97 | 305 |
| Msa0898320 | AT4G31000.1 | 41.412 | 425 | 227 | 11 | 11 | 422 | 13 | 428 | 6.89e-96 | 301 |
| Msa0898320 | AT5G62570.1 | 38.619 | 391 | 216 | 10 | 1 | 381 | 1 | 377 | 6.70e-85 | 271 |
| Msa0898320 | AT2G24300.1 | 44.012 | 334 | 180 | 5 | 55 | 384 | 8 | 338 | 3.06e-84 | 270 |
| Msa0898320 | AT5G62570.4 | 39.410 | 373 | 202 | 10 | 1 | 363 | 1 | 359 | 3.37e-84 | 265 |
| Msa0898320 | AT5G62570.2 | 39.503 | 362 | 198 | 8 | 29 | 381 | 13 | 362 | 1.42e-82 | 264 |
| Msa0898320 | AT4G31000.2 | 37.089 | 426 | 223 | 14 | 11 | 422 | 13 | 407 | 5.45e-72 | 238 |
| Msa0898320 | AT5G62570.3 | 41.528 | 301 | 157 | 8 | 1 | 295 | 1 | 288 | 5.37e-68 | 220 |
| Msa0898320 | AT5G26920.3 | 35.457 | 361 | 211 | 8 | 26 | 381 | 24 | 367 | 1.18e-67 | 223 |
| Msa0898320 | AT5G26920.1 | 35.457 | 361 | 211 | 8 | 26 | 381 | 24 | 367 | 1.06e-66 | 224 |
| Msa0898320 | AT5G26920.2 | 35.180 | 361 | 204 | 9 | 26 | 381 | 24 | 359 | 2.34e-63 | 215 |
Find 145 sgRNAs with CRISPR-Local
Find 324 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGACTTTGACACATTAATTA+TGG | 0.157781 | 6_1:-91895527 | None:intergenic |
| TAAAATTTGTAGGAATTTAA+TGG | 0.165762 | 6_1:-91895463 | None:intergenic |
| ACAACAATCTCTAGCTTTAT+AGG | 0.214346 | 6_1:-91892117 | None:intergenic |
| GGATAAGGAGCAGGAAGTTT+AGG | 0.223342 | 6_1:+91892316 | Msa0898320:CDS |
| TTCAACAGCTCAGATTTATT+TGG | 0.233641 | 6_1:+91895348 | Msa0898320:three_prime_UTR |
| GTAGAGCTATATAGATAAAT+TGG | 0.240990 | 6_1:+91894291 | Msa0898320:intron |
| CTAGAGATTGTTGTACTTGA+TGG | 0.248608 | 6_1:+91892126 | Msa0898320:CDS |
| AACTTTAAATGTACTAATTT+CGG | 0.261417 | 6_1:+91895266 | Msa0898320:exon |
| GAAGACTTGTTGGAACAATT+TGG | 0.268874 | 6_1:-91892089 | None:intergenic |
| GGGAAGAGACCATTACTTTC+TGG | 0.273521 | 6_1:+91892222 | Msa0898320:CDS |
| GCTTTAATTAATTTGCATAT+TGG | 0.279068 | 6_1:-91894087 | None:intergenic |
| TTGCTTACTATAAAATTTGT+AGG | 0.293623 | 6_1:-91895473 | None:intergenic |
| TTATAGTAAGCAAATATAAT+AGG | 0.302924 | 6_1:+91895483 | Msa0898320:three_prime_UTR |
| GACTTTGACACATTAATTAT+GGG | 0.308430 | 6_1:-91895526 | None:intergenic |
| ACTGTTGCTGGATGATTGTT+TGG | 0.310236 | 6_1:-91895010 | None:intergenic |
| GCATTGAAGATAAACAAATT+AGG | 0.310253 | 6_1:+91895603 | Msa0898320:three_prime_UTR |
| TCAGGCCTTAGGGACATTAA+TGG | 0.310731 | 6_1:+91895232 | Msa0898320:CDS |
| TATGTTGTTGCTACTGTTGC+TGG | 0.313492 | 6_1:-91895022 | None:intergenic |
| TGCATTTGGTGTTGTGGTAT+AGG | 0.314012 | 6_1:-91895149 | None:intergenic |
| AGTTTCATACCTGTGAAAAT+TGG | 0.318276 | 6_1:-91890763 | None:intergenic |
| AATGCAAATGGATTTCCTTT+TGG | 0.323071 | 6_1:+91895166 | Msa0898320:CDS |
| AAAATTTGTAGGAATTTAAT+GGG | 0.323236 | 6_1:-91895462 | None:intergenic |
| TATCATCAGAATCAATATTA+TGG | 0.324552 | 6_1:+91895043 | Msa0898320:CDS |
| AAAAGAAGTTGCTTTGATCT+TGG | 0.331441 | 6_1:+91895557 | Msa0898320:three_prime_UTR |
| GATAAGGAGCAGGAAGTTTA+GGG | 0.346752 | 6_1:+91892317 | Msa0898320:CDS |
| CACCTTCAGGTTCAGGCCTT+AGG | 0.352361 | 6_1:+91895221 | Msa0898320:CDS |
| GAATTTAATGGGATAGGATT+AGG | 0.352979 | 6_1:-91895451 | None:intergenic |
| CACATGATGAAAATGAGAAT+TGG | 0.357216 | 6_1:+91892157 | Msa0898320:CDS |
| TTGGAGAAGCATACACAAAA+TGG | 0.358634 | 6_1:+91894314 | Msa0898320:CDS |
| TATACTGTACCTTATTCATT+TGG | 0.359030 | 6_1:-91894152 | None:intergenic |
| AAAGAAGTTGCTTTGATCTT+GGG | 0.359234 | 6_1:+91895558 | Msa0898320:three_prime_UTR |
| GGTCTCATTCGTTTGTCGTT+TGG | 0.363334 | 6_1:-91889594 | None:intergenic |
| GTACTTGAGCCAAATGAATA+AGG | 0.364385 | 6_1:+91894143 | Msa0898320:CDS |
| AAAGGAAATCCATTTGCATT+TGG | 0.365748 | 6_1:-91895163 | None:intergenic |
| GAAGAGGTGGATAGAGCAAT+TGG | 0.372285 | 6_1:+91890634 | Msa0898320:CDS |
| GACTGAGGCATTTGTTGTTA+AGG | 0.376185 | 6_1:+91892395 | Msa0898320:CDS |
| CAGGCCTTAGGGACATTAAT+GGG | 0.376761 | 6_1:+91895233 | Msa0898320:CDS |
| ATATATACCTCTCTTAGCTT+TGG | 0.385685 | 6_1:-91893427 | None:intergenic |
| CAACAATCTCTAGCTTTATA+GGG | 0.387802 | 6_1:-91892116 | None:intergenic |
| GCTTTCCACCTTCCATCAAT+AGG | 0.389606 | 6_1:+91890662 | Msa0898320:CDS |
| ATAGGGTAAGGAAGACTTGT+TGG | 0.390458 | 6_1:-91892099 | None:intergenic |
| GTTTCATACCTGTGAAAATT+GGG | 0.394357 | 6_1:-91890762 | None:intergenic |
| TTAATGTGTCAAAGTCAAAA+TGG | 0.394518 | 6_1:+91895533 | Msa0898320:three_prime_UTR |
| GTTGTTGATCCCTTGGTGCT+TGG | 0.401027 | 6_1:-91890702 | None:intergenic |
| GATGAGGACATGACACCTTC+AGG | 0.405456 | 6_1:+91895208 | Msa0898320:CDS |
| GAAGTTTAGGGTTGCAGTTA+TGG | 0.408854 | 6_1:+91892329 | Msa0898320:CDS |
| TAATGAAGGTGACCTATTGA+TGG | 0.408912 | 6_1:-91890674 | None:intergenic |
| GACATGACACCTTCAGGTTC+AGG | 0.411025 | 6_1:+91895214 | Msa0898320:CDS |
| GTGTGGCGCCTAGAGAAGAT+AGG | 0.412903 | 6_1:+91893319 | Msa0898320:CDS |
| AAGGTTCCAAAGCTCCTAAA+AGG | 0.417229 | 6_1:-91889828 | None:intergenic |
| TACATAGTGAAGGAAAGAAC+TGG | 0.419237 | 6_1:+91892201 | Msa0898320:CDS |
| CGTCCTGCTGTAATAGATCT+TGG | 0.424965 | 6_1:-91895417 | None:intergenic |
| TACAACTCTCATTCAACAAA+AGG | 0.425881 | 6_1:+91890731 | Msa0898320:CDS |
| ACAAATTAGGTTTAGTGTAA+AGG | 0.426127 | 6_1:+91895616 | Msa0898320:three_prime_UTR |
| TCAACAAGACTTATGCAGAT+AGG | 0.429243 | 6_1:-91892051 | None:intergenic |
| GCAGTTACAGCAAGCGATCC+AGG | 0.429946 | 6_1:-91895290 | None:intergenic |
| AAATCAACCTGCCACTTTGT+AGG | 0.430518 | 6_1:+91895660 | Msa0898320:three_prime_UTR |
| AAGGTTGGTTGTTGATCCCT+TGG | 0.434839 | 6_1:-91890709 | None:intergenic |
| ACCTTCAGGTTCAGGCCTTA+GGG | 0.438529 | 6_1:+91895222 | Msa0898320:CDS |
| ATCTCTAGCTTTATAGGGTA+AGG | 0.447610 | 6_1:-91892111 | None:intergenic |
| AGGTTTAGTGTAAAGGTGGC+AGG | 0.450388 | 6_1:+91895623 | Msa0898320:three_prime_UTR |
| CATCTTTCCCTATCTTCTCT+AGG | 0.450984 | 6_1:-91893327 | None:intergenic |
| AGAGGTGGAATTGCACCAAT+TGG | 0.453092 | 6_1:+91892264 | Msa0898320:CDS |
| ACCACAACACCAAATGCAAA+TGG | 0.454821 | 6_1:+91895154 | Msa0898320:CDS |
| GCCATTTGTGCATTATTGCT+TGG | 0.455048 | 6_1:-91895100 | None:intergenic |
| ATGGGAGTAATCAAAGTGTT+AGG | 0.455811 | 6_1:+91892358 | Msa0898320:CDS |
| CAGATAATTCTAGCTGGATA+AGG | 0.456631 | 6_1:+91892301 | Msa0898320:CDS |
| ACATGGGGAGCAAGATCTAT+AGG | 0.460309 | 6_1:+91894031 | Msa0898320:CDS |
| TCCAAAGCTCCTAAAAGGTT+CGG | 0.465480 | 6_1:-91889823 | None:intergenic |
| TTAATTAAAGCTAATATCAA+TGG | 0.468078 | 6_1:+91894099 | Msa0898320:CDS |
| TTTGTTGAATGAGAGTTGTA+AGG | 0.470397 | 6_1:-91890728 | None:intergenic |
| TCCATTTGCATTTGGTGTTG+TGG | 0.474676 | 6_1:-91895155 | None:intergenic |
| GCATATTGGATTCAGAAGAA+TGG | 0.478493 | 6_1:-91894073 | None:intergenic |
| AATGAGTTGGAGGAAATTGA+TGG | 0.479528 | 6_1:+91894337 | Msa0898320:CDS |
| AATCAACCTGCCACTTTGTA+GGG | 0.485321 | 6_1:+91895661 | Msa0898320:three_prime_UTR |
| CAATTCCACCTCTCATAGTA+AGG | 0.486241 | 6_1:-91892254 | None:intergenic |
| ACCAAGCAATAATGCACAAA+TGG | 0.486276 | 6_1:+91895099 | Msa0898320:CDS |
| AACATTGCTTTGTTAACTCA+AGG | 0.487994 | 6_1:+91894373 | Msa0898320:CDS |
| TTGGCTCAAGTACTCTCTGC+TGG | 0.488877 | 6_1:-91894133 | None:intergenic |
| TTGTAGGAATTTAATGGGAT+AGG | 0.492794 | 6_1:-91895457 | None:intergenic |
| CACAAAATGGAATGAGTTGG+AGG | 0.508685 | 6_1:+91894327 | Msa0898320:CDS |
| TCTCTTCCCTACAAAGTGGC+AGG | 0.509034 | 6_1:-91895667 | None:intergenic |
| CACACATCATCGCCAAGCAT+TGG | 0.517632 | 6_1:-91893301 | None:intergenic |
| CCATCACAAAATGATGGCCA+AGG | 0.521911 | 6_1:+91893357 | Msa0898320:CDS |
| GTCGTCCGATCTGCGATCGA+TGG | 0.523927 | 6_1:-91895395 | None:intergenic |
| AAACATCATCCACCAATGCT+TGG | 0.524035 | 6_1:+91893289 | Msa0898320:CDS |
| ATTCTAGCTGGATAAGGAGC+AGG | 0.530678 | 6_1:+91892307 | Msa0898320:CDS |
| TGGTTAGGTGAGTGAAGAGG+TGG | 0.534317 | 6_1:+91890621 | Msa0898320:intron |
| GATCGATGGCTGAGATCAAA+CGG | 0.534584 | 6_1:-91895381 | None:intergenic |
| GGTGCTTGGATTCTTAATGA+AGG | 0.535525 | 6_1:-91890688 | None:intergenic |
| AGCTATATAGATAAATTGGT+TGG | 0.536950 | 6_1:+91894295 | Msa0898320:CDS |
| AAATGTACTAATTTCGGACC+TGG | 0.541208 | 6_1:+91895272 | Msa0898320:exon |
| TTGAATGAGAGTTGTAAGGT+TGG | 0.548181 | 6_1:-91890724 | None:intergenic |
| GTGAACTCTATGTCTCCAAT+TGG | 0.550652 | 6_1:-91892279 | None:intergenic |
| AGTTCACAGATAATTCTAGC+TGG | 0.556731 | 6_1:+91892295 | Msa0898320:CDS |
| GTTGCAGTTATGGTGAGTCA+TGG | 0.556840 | 6_1:+91892339 | Msa0898320:CDS |
| ACATCATCGCCAAGCATTGG+TGG | 0.557359 | 6_1:-91893298 | None:intergenic |
| TGAACCCATTAATGTCCCTA+AGG | 0.560681 | 6_1:-91895237 | None:intergenic |
| GATGGCCAAGGGGATCAAAA+CGG | 0.564022 | 6_1:+91893369 | Msa0898320:CDS |
| TTGCAGTTATGGTGAGTCAT+GGG | 0.566538 | 6_1:+91892340 | Msa0898320:CDS |
| TGTGAGCCTGTGAAGCCAAA+AGG | 0.567683 | 6_1:-91895181 | None:intergenic |
| ATACACAAAATGGAATGAGT+TGG | 0.570127 | 6_1:+91894324 | Msa0898320:CDS |
| CTAGAGAAGATAGGGAAAGA+TGG | 0.572158 | 6_1:+91893328 | Msa0898320:CDS |
| TTCAATTCTCCAGAAAGTAA+TGG | 0.573973 | 6_1:-91892231 | None:intergenic |
| AGCTTTCCATCACAAAATGA+TGG | 0.576938 | 6_1:+91893351 | Msa0898320:CDS |
| CAAAGTGTTAGGATTCAAGA+AGG | 0.583699 | 6_1:+91892369 | Msa0898320:CDS |
| AATTAGGTTTAGTGTAAAGG+TGG | 0.585387 | 6_1:+91895619 | Msa0898320:three_prime_UTR |
| CGACCAAGATCTATTACAGC+AGG | 0.586074 | 6_1:+91895414 | Msa0898320:three_prime_UTR |
| AGTGCGTACGAAGCTAAAGA+AGG | 0.588133 | 6_1:-91889615 | None:intergenic |
| TGTGGCGCCTAGAGAAGATA+GGG | 0.589096 | 6_1:+91893320 | Msa0898320:CDS |
| CAATGCTTGGCGATGATGTG+TGG | 0.590954 | 6_1:+91893302 | Msa0898320:CDS |
| CATCACAAAATGATGGCCAA+GGG | 0.599188 | 6_1:+91893358 | Msa0898320:CDS |
| ATTCAATAAATACATAGTGA+AGG | 0.602832 | 6_1:+91892191 | Msa0898320:CDS |
| CATACCTGTGAAAATTGGGA+GGG | 0.602874 | 6_1:-91890758 | None:intergenic |
| TCATACCTGTGAAAATTGGG+AGG | 0.603052 | 6_1:-91890759 | None:intergenic |
| CTCAGCCATCGATCGCAGAT+CGG | 0.603805 | 6_1:+91895390 | Msa0898320:three_prime_UTR |
| GGTTTAGTGTAAAGGTGGCA+GGG | 0.605074 | 6_1:+91895624 | Msa0898320:three_prime_UTR |
| GAATTGAACCTTACTATGAG+AGG | 0.607156 | 6_1:+91892246 | Msa0898320:CDS |
| CACAAATGGCAAGCAGTGAG+TGG | 0.611326 | 6_1:+91895113 | Msa0898320:CDS |
| TTGAACCTTACTATGAGAGG+TGG | 0.618381 | 6_1:+91892249 | Msa0898320:CDS |
| TCCCTAAGGCCTGAACCTGA+AGG | 0.620292 | 6_1:-91895223 | None:intergenic |
| ATTATCTCTTCCCTACAAAG+TGG | 0.620489 | 6_1:-91895671 | None:intergenic |
| GGTGGCAGGGACTAATGTTG+TGG | 0.620928 | 6_1:+91895637 | Msa0898320:three_prime_UTR |
| GCATGCAATGACTTGTGACA+TGG | 0.626229 | 6_1:+91894014 | Msa0898320:CDS |
| AGTAGAATACTCGACGCTGA+AGG | 0.629771 | 6_1:+91892024 | Msa0898320:CDS |
| ATTTGGTTAGGTGAGTGAAG+AGG | 0.632675 | 6_1:+91890618 | Msa0898320:intron |
| ACATAGTGAAGGAAAGAACT+GGG | 0.634050 | 6_1:+91892202 | Msa0898320:CDS |
| ATTAAGAATCCAAGCACCAA+GGG | 0.638386 | 6_1:+91890693 | Msa0898320:CDS |
| GGGACATTAATGGGTTCACA+AGG | 0.645434 | 6_1:+91895242 | Msa0898320:CDS |
| CATTAAGAATCCAAGCACCA+AGG | 0.647255 | 6_1:+91890692 | Msa0898320:CDS |
| AGCAAGATCTATAGGTACCG+TGG | 0.658732 | 6_1:+91894039 | Msa0898320:CDS |
| CACAGGCTCACAATCAGATG+AGG | 0.659714 | 6_1:+91895192 | Msa0898320:CDS |
| GAATGGTAAACTGAGGTCCA+CGG | 0.664053 | 6_1:-91894056 | None:intergenic |
| GGTGACCTATTGATGGAAGG+TGG | 0.664907 | 6_1:-91890667 | None:intergenic |
| TGATACTCCAAAGCTAAGAG+AGG | 0.665341 | 6_1:+91893420 | Msa0898320:CDS |
| CATGCAATGACTTGTGACAT+GGG | 0.667953 | 6_1:+91894015 | Msa0898320:CDS |
| TTCAGAAGAATGGTAAACTG+AGG | 0.674138 | 6_1:-91894063 | None:intergenic |
| GAAGGTGACCTATTGATGGA+AGG | 0.674542 | 6_1:-91890670 | None:intergenic |
| ATAGGTAAGCTACGTACGAG+TGG | 0.678833 | 6_1:+91895501 | Msa0898320:three_prime_UTR |
| ATCACAAAATGATGGCCAAG+GGG | 0.679582 | 6_1:+91893359 | Msa0898320:CDS |
| TGGGGATGTCTGATAGAATG+TGG | 0.679640 | 6_1:+91893977 | Msa0898320:CDS |
| TTTGTTGTTAAGGATCATCG+TGG | 0.682651 | 6_1:+91892405 | Msa0898320:CDS |
| GATTCAAGAAGGCATGACTG+AGG | 0.696401 | 6_1:+91892380 | Msa0898320:CDS |
| AATTATAGGTGATCAAACTG+TGG | 0.703154 | 6_1:+91894979 | Msa0898320:intron |
| ATGCAATGACTTGTGACATG+GGG | 0.729736 | 6_1:+91894016 | Msa0898320:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTATTAAAAATGGTAAA+AGG | - | chr6_1:91890230-91890249 | None:intergenic | 10.0% |
| !! | TCTATTTAAGAAAAAAAAAT+TGG | - | chr6_1:91890991-91891010 | None:intergenic | 10.0% |
| !! | TACAAATTATAATACAATTA+AGG | - | chr6_1:91891463-91891482 | None:intergenic | 10.0% |
| !! | ATAAACTTAAATTACTAAAA+AGG | - | chr6_1:91891513-91891532 | None:intergenic | 10.0% |
| !! | AATCTAATATATTTACTTAA+AGG | - | chr6_1:91893886-91893905 | None:intergenic | 10.0% |
| !!! | TTTTTAGATACTTAATAAAA+TGG | - | chr6_1:91894885-91894904 | None:intergenic | 10.0% |
| !! | TTTAATATGAACTTAATTAT+AGG | + | chr6_1:91894965-91894984 | Msa0898320:intron | 10.0% |
| !! | TATTGTATATATTGTTTGTT+GGG | - | chr6_1:91890034-91890053 | None:intergenic | 15.0% |
| !! | ATATTGTATATATTGTTTGT+TGG | - | chr6_1:91890035-91890054 | None:intergenic | 15.0% |
| !! | TGATATCATCATAAAATTTA+AGG | + | chr6_1:91890163-91890182 | Msa0898320:intron | 15.0% |
| !!! | TAATATGATTCTCTAAAAAA+TGG | + | chr6_1:91890192-91890211 | Msa0898320:intron | 15.0% |
| !!! | AAATTTAAGGTTGTTTAATA+TGG | - | chr6_1:91890333-91890352 | None:intergenic | 15.0% |
| !! | ACTTTATTATATGATTCATT+TGG | + | chr6_1:91890601-91890620 | Msa0898320:intron | 15.0% |
| !!! | TTTTTTTTCTTAAATAGAGA+AGG | + | chr6_1:91890993-91891012 | Msa0898320:intron | 15.0% |
| !! | TGAAATGAAAAAAAAGATAA+AGG | - | chr6_1:91891200-91891219 | None:intergenic | 15.0% |
| !! | CTTAAAAATTCATATGAAAA+TGG | - | chr6_1:91891239-91891258 | None:intergenic | 15.0% |
| !!! | TTCATGATTTTATTTTCTTA+TGG | + | chr6_1:91891266-91891285 | Msa0898320:intron | 15.0% |
| !!! | ATCTTTTTTTCATTTCAATT+TGG | - | chr6_1:91891386-91891405 | None:intergenic | 15.0% |
| !! | TTGAAATGAAAAAAAGATAA+AGG | + | chr6_1:91891388-91891407 | Msa0898320:intron | 15.0% |
| !!! | ATTTTCATAATTCATAAACT+TGG | + | chr6_1:91892442-91892461 | Msa0898320:intron | 15.0% |
| !! | TATATTATTGCAATATTGAT+TGG | + | chr6_1:91892516-91892535 | Msa0898320:intron | 15.0% |
| !! | CATCTTAATAAGATATTTAA+GGG | - | chr6_1:91892612-91892631 | None:intergenic | 15.0% |
| !! | TAAATGTGAAATGAAAAATA+TGG | + | chr6_1:91892877-91892896 | Msa0898320:intron | 15.0% |
| !! | AGGTATATATCTTTATAATT+AGG | + | chr6_1:91893440-91893459 | Msa0898320:intron | 15.0% |
| !! | GGTATATATCTTTATAATTA+GGG | + | chr6_1:91893441-91893460 | Msa0898320:intron | 15.0% |
| !! | GTATATATCTTTATAATTAG+GGG | + | chr6_1:91893442-91893461 | Msa0898320:intron | 15.0% |
| !! | TTAATTAAAGCTAATATCAA+TGG | + | chr6_1:91894099-91894118 | Msa0898320:CDS | 15.0% |
| !!! | GATGAATTAATTTTTAAACT+CGG | + | chr6_1:91894617-91894636 | Msa0898320:intron | 15.0% |
| !! | AACTTTAAATGTACTAATTT+CGG | + | chr6_1:91895266-91895285 | Msa0898320:exon | 15.0% |
| !! | AAAATTTGTAGGAATTTAAT+GGG | - | chr6_1:91895465-91895484 | None:intergenic | 15.0% |
| !! | TAAAATTTGTAGGAATTTAA+TGG | - | chr6_1:91895466-91895485 | None:intergenic | 15.0% |
| !! | TTATAGTAAGCAAATATAAT+AGG | + | chr6_1:91895483-91895502 | Msa0898320:three_prime_UTR | 15.0% |
| !! | ATATATCATGCATAAGAATA+AGG | - | chr6_1:91889752-91889771 | None:intergenic | 20.0% |
| !! | ATGATATATTGAATTCTTCT+TGG | + | chr6_1:91889763-91889782 | Msa0898320:intron | 20.0% |
| !!! | ATACATATTTGAAGTTAATG+TGG | + | chr6_1:91889952-91889971 | Msa0898320:intron | 20.0% |
| !!! | TGTACAAAAATATTGTTGTT+AGG | + | chr6_1:91890118-91890137 | Msa0898320:intron | 20.0% |
| !! | CAAGACTCAAATAAAATTTA+AGG | - | chr6_1:91890346-91890365 | None:intergenic | 20.0% |
| !! | ATTATATGATTCATTTGGTT+AGG | + | chr6_1:91890606-91890625 | Msa0898320:intron | 20.0% |
| !! | TTAAGAAAAAAAAATTGGCT+TGG | - | chr6_1:91890986-91891005 | None:intergenic | 20.0% |
| !! | TTATTTACATTTACCTAAGT+AGG | - | chr6_1:91891099-91891118 | None:intergenic | 20.0% |
| !! | GTTACCTAAAATAAAGTTAA+GGG | - | chr6_1:91891169-91891188 | None:intergenic | 20.0% |
| !! | TGTTACCTAAAATAAAGTTA+AGG | - | chr6_1:91891170-91891189 | None:intergenic | 20.0% |
| !!! | CTTTATTTTAGGTAACAATT+TGG | + | chr6_1:91891173-91891192 | Msa0898320:intron | 20.0% |
| !!! | ATAGTCTTGTAAATATCAAA+AGG | + | chr6_1:91891620-91891639 | Msa0898320:intron | 20.0% |
| !!! | TAGTCTTGTAAATATCAAAA+GGG | + | chr6_1:91891621-91891640 | Msa0898320:intron | 20.0% |
| !!! | TATGAAACATGCTTTTAAAT+AGG | + | chr6_1:91891718-91891737 | Msa0898320:intron | 20.0% |
| !! | ATAAATTCGGTAATCAAATT+TGG | - | chr6_1:91891912-91891931 | None:intergenic | 20.0% |
| !! | ATTCAATAAATACATAGTGA+AGG | + | chr6_1:91892191-91892210 | Msa0898320:CDS | 20.0% |
| !!! | AACATGACTTAATTTTTTGT+AGG | + | chr6_1:91892489-91892508 | Msa0898320:intron | 20.0% |
| !! | CCATCTTAATAAGATATTTA+AGG | - | chr6_1:91892613-91892632 | None:intergenic | 20.0% |
| !! | CCTTAAATATCTTATTAAGA+TGG | + | chr6_1:91892610-91892629 | Msa0898320:intron | 20.0% |
| !! | TATAAAAAACCCACTTATTA+TGG | + | chr6_1:91893007-91893026 | Msa0898320:intron | 20.0% |
| !!! | TCTTTATGCTAATTTTGTTT+AGG | + | chr6_1:91893504-91893523 | Msa0898320:intron | 20.0% |
| !! | AAGAAATTGATCTTGTATAA+TGG | - | chr6_1:91893623-91893642 | None:intergenic | 20.0% |
| !!! | TAAGTTTAAGTTCAAATTTG+AGG | - | chr6_1:91893663-91893682 | None:intergenic | 20.0% |
| !! | TAACTCGTTTGTTTATTTAA+AGG | + | chr6_1:91893692-91893711 | Msa0898320:intron | 20.0% |
| !!! | ATTTATCTGAAATCAGATTT+TGG | + | chr6_1:91893951-91893970 | Msa0898320:intron | 20.0% |
| !!! | TTTATCTGAAATCAGATTTT+GGG | + | chr6_1:91893952-91893971 | Msa0898320:intron | 20.0% |
| !!! | GCTTTAATTAATTTGCATAT+TGG | - | chr6_1:91894090-91894109 | None:intergenic | 20.0% |
| !! | TTACACTATATGTTAGATAT+TGG | + | chr6_1:91894225-91894244 | Msa0898320:intron | 20.0% |
| !! | ATTTAACATATTGGTCATAT+CGG | - | chr6_1:91894717-91894736 | None:intergenic | 20.0% |
| !! | TATCATCAGAATCAATATTA+TGG | + | chr6_1:91895043-91895062 | Msa0898320:CDS | 20.0% |
| !! | TTGCTTACTATAAAATTTGT+AGG | - | chr6_1:91895476-91895495 | None:intergenic | 20.0% |
| !!! | CTTACAACTCTTTTAAGAAA+AGG | - | chr6_1:91889850-91889869 | None:intergenic | 25.0% |
| ! | GTCATCTCTTAATTCTTATT+AGG | - | chr6_1:91890012-91890031 | None:intergenic | 25.0% |
| !! | AATCTAGCTTATGAAAATTG+AGG | + | chr6_1:91890079-91890098 | Msa0898320:intron | 25.0% |
| !! | ATCTAGCTTATGAAAATTGA+GGG | + | chr6_1:91890080-91890099 | Msa0898320:intron | 25.0% |
| ! | ATCAAATATTTACAGTCATG+TGG | - | chr6_1:91890147-91890166 | None:intergenic | 25.0% |
| ! | AATTGGAGATTTCATATTGA+CGG | - | chr6_1:91890425-91890444 | None:intergenic | 25.0% |
| ! | TTGTAACTCTAACTATCTAA+GGG | - | chr6_1:91890818-91890837 | None:intergenic | 25.0% |
| ! | TTTGTAACTCTAACTATCTA+AGG | - | chr6_1:91890819-91890838 | None:intergenic | 25.0% |
| !!! | CCTTACCTTTTTAGTTAAAT+AGG | - | chr6_1:91891035-91891054 | None:intergenic | 25.0% |
| ! | CCTATTTAACTAAAAAGGTA+AGG | + | chr6_1:91891032-91891051 | Msa0898320:intron | 25.0% |
| !!! | TAGTCCCTTAACTTTATTTT+AGG | + | chr6_1:91891162-91891181 | Msa0898320:intron | 25.0% |
| ! | TCATATGAAAATGGATCAAA+AGG | - | chr6_1:91891230-91891249 | None:intergenic | 25.0% |
| ! | CTTGAAAATGTATATGAGAA+TGG | + | chr6_1:91891350-91891369 | Msa0898320:intron | 25.0% |
| ! | TGTTACCTGAAATTAAGTTA+AGG | + | chr6_1:91891418-91891437 | Msa0898320:intron | 25.0% |
| ! | GTTACCTGAAATTAAGTTAA+GGG | + | chr6_1:91891419-91891438 | Msa0898320:intron | 25.0% |
| ! | ACATTAATCTATTAGTTCGT+TGG | + | chr6_1:91891653-91891672 | Msa0898320:intron | 25.0% |
| !!! | CTGTCATAAGCTTATTTTTT+AGG | - | chr6_1:91891784-91891803 | None:intergenic | 25.0% |
| ! | CTAAAAAATAAGCTTATGAC+AGG | + | chr6_1:91891782-91891801 | Msa0898320:intron | 25.0% |
| ! | TACTTATTTCCAACTAACTT+TGG | + | chr6_1:91892564-91892583 | Msa0898320:intron | 25.0% |
| ! | TTAAAAAGACCAAAGTTAGT+TGG | - | chr6_1:91892576-91892595 | None:intergenic | 25.0% |
| ! | TCTATAGTACAACTAAAAGT+GGG | - | chr6_1:91892638-91892657 | None:intergenic | 25.0% |
| ! | TGTACTATAGACTATGAAAT+AGG | + | chr6_1:91892647-91892666 | Msa0898320:intron | 25.0% |
| !! | ATAGGGTAAATGATTTTTGT+TGG | + | chr6_1:91893043-91893062 | Msa0898320:intron | 25.0% |
| ! | AGTATATATGATTCCTTAAC+AGG | - | chr6_1:91893181-91893200 | None:intergenic | 25.0% |
| ! | TTGTACACTTCATGATAATT+AGG | - | chr6_1:91893268-91893287 | None:intergenic | 25.0% |
| ! | TATACTGTACCTTATTCATT+TGG | - | chr6_1:91894155-91894174 | None:intergenic | 25.0% |
| ! | TGTAGTATTACTTTACTTTG+TGG | + | chr6_1:91894201-91894220 | Msa0898320:intron | 25.0% |
| !!! | GTCCTCTAATTCATTTTAAT+TGG | + | chr6_1:91894247-91894266 | Msa0898320:intron | 25.0% |
| ! | CACCAATTAAAATGAATTAG+AGG | - | chr6_1:91894252-91894271 | None:intergenic | 25.0% |
| !! | TAGCTCTACAAATTTAGAAA+TGG | - | chr6_1:91894280-91894299 | None:intergenic | 25.0% |
| ! | GTAGAGCTATATAGATAAAT+TGG | + | chr6_1:91894291-91894310 | Msa0898320:intron | 25.0% |
| ! | AGCTATATAGATAAATTGGT+TGG | + | chr6_1:91894295-91894314 | Msa0898320:CDS | 25.0% |
| ! | ATAAGATCATATACTCATAC+TGG | + | chr6_1:91894503-91894522 | Msa0898320:intron | 25.0% |
| ! | AATGCACACATTTAACATAT+TGG | - | chr6_1:91894726-91894745 | None:intergenic | 25.0% |
| ! | AAACAAATTCATGTTAAGAG+TGG | + | chr6_1:91894782-91894801 | Msa0898320:intron | 25.0% |
| !! | CTAGCAATATTTTCTATAGA+TGG | - | chr6_1:91895073-91895092 | None:intergenic | 25.0% |
| ! | GACTTTGACACATTAATTAT+GGG | - | chr6_1:91895529-91895548 | None:intergenic | 25.0% |
| ! | TGACTTTGACACATTAATTA+TGG | - | chr6_1:91895530-91895549 | None:intergenic | 25.0% |
| ! | TTAATGTGTCAAAGTCAAAA+TGG | + | chr6_1:91895533-91895552 | Msa0898320:three_prime_UTR | 25.0% |
| ! | GCATTGAAGATAAACAAATT+AGG | + | chr6_1:91895603-91895622 | Msa0898320:three_prime_UTR | 25.0% |
| ! | ACAAATTAGGTTTAGTGTAA+AGG | + | chr6_1:91895616-91895635 | Msa0898320:three_prime_UTR | 25.0% |
| !!! | TGTTTTGAAGCAAAGAGTTA+AGG | - | chr6_1:91889512-91889531 | None:intergenic | 30.0% |
| TCAAAACACTTCTGCAAAAA+TGG | + | chr6_1:91889524-91889543 | Msa0898320:exon | 30.0% | |
| TGCAAAAATGGCTACTAAAA+GGG | + | chr6_1:91889536-91889555 | Msa0898320:exon | 30.0% | |
| !!! | GTAGATAGTAGTTTTTTGCA+TGG | - | chr6_1:91889701-91889720 | None:intergenic | 30.0% |
| AAGGTTGTTTAATATGGATC+CGG | - | chr6_1:91890327-91890346 | None:intergenic | 30.0% | |
| TAATGCAAAGCTTCATAGTT+AGG | - | chr6_1:91890494-91890513 | None:intergenic | 30.0% | |
| TTTGTTGAATGAGAGTTGTA+AGG | - | chr6_1:91890731-91890750 | None:intergenic | 30.0% | |
| TACAACTCTCATTCAACAAA+AGG | + | chr6_1:91890731-91890750 | Msa0898320:CDS | 30.0% | |
| GTTTCATACCTGTGAAAATT+GGG | - | chr6_1:91890765-91890784 | None:intergenic | 30.0% | |
| AGTTTCATACCTGTGAAAAT+TGG | - | chr6_1:91890766-91890785 | None:intergenic | 30.0% | |
| ! | CTTTTCTATCTCTAAACTTC+CGG | - | chr6_1:91890868-91890887 | None:intergenic | 30.0% |
| TAATTTAGTCGCTAACTGTT+AGG | + | chr6_1:91890902-91890921 | Msa0898320:intron | 30.0% | |
| AATTTAGTCGCTAACTGTTA+GGG | + | chr6_1:91890903-91890922 | Msa0898320:intron | 30.0% | |
| CGAAGCCTATTTAACTAAAA+AGG | + | chr6_1:91891027-91891046 | Msa0898320:intron | 30.0% | |
| AAAAACCTCTTAATCCTATC+AGG | + | chr6_1:91891069-91891088 | Msa0898320:intron | 30.0% | |
| TTACATTTACCTAAGTAGGT+TGG | - | chr6_1:91891095-91891114 | None:intergenic | 30.0% | |
| TTCTTATGCAAACATAGACA+AGG | - | chr6_1:91891316-91891335 | None:intergenic | 30.0% | |
| GTATATGAGAATGGACAAAA+AGG | + | chr6_1:91891359-91891378 | Msa0898320:intron | 30.0% | |
| ! | CTTAATTTCAGGTAACAGTT+TGG | - | chr6_1:91891415-91891434 | None:intergenic | 30.0% |
| TAGTCCCTTAACTTAATTTC+AGG | - | chr6_1:91891426-91891445 | None:intergenic | 30.0% | |
| ! | TAAGCCTTAAATCTTTTGAC+AGG | + | chr6_1:91891819-91891838 | Msa0898320:intron | 30.0% |
| ! | AACGACGAAGAGTATAAATT+CGG | - | chr6_1:91891925-91891944 | None:intergenic | 30.0% |
| !! | CAACAATCTCTAGCTTTATA+GGG | - | chr6_1:91892119-91892138 | None:intergenic | 30.0% |
| !! | ACAACAATCTCTAGCTTTAT+AGG | - | chr6_1:91892120-91892139 | None:intergenic | 30.0% |
| ! | CAATTCTCATTTTCATCATG+TGG | - | chr6_1:91892159-91892178 | None:intergenic | 30.0% |
| CACATGATGAAAATGAGAAT+TGG | + | chr6_1:91892157-91892176 | Msa0898320:CDS | 30.0% | |
| TTCAATTCTCCAGAAAGTAA+TGG | - | chr6_1:91892234-91892253 | None:intergenic | 30.0% | |
| CTATAGTACAACTAAAAGTG+GGG | - | chr6_1:91892637-91892656 | None:intergenic | 30.0% | |
| GTCTATAGTACAACTAAAAG+TGG | - | chr6_1:91892639-91892658 | None:intergenic | 30.0% | |
| !! | TCATTTTATAGCTTCTAGCT+AGG | + | chr6_1:91892706-91892725 | Msa0898320:intron | 30.0% |
| !! | CATTTTATAGCTTCTAGCTA+GGG | + | chr6_1:91892707-91892726 | Msa0898320:intron | 30.0% |
| ATATCTCTCTTAATCTGAGA+CGG | - | chr6_1:91892760-91892779 | None:intergenic | 30.0% | |
| ! | TTAAGCATTTTTGCCTGTTA+AGG | + | chr6_1:91893165-91893184 | Msa0898320:intron | 30.0% |
| ATATATACCTCTCTTAGCTT+TGG | - | chr6_1:91893430-91893449 | None:intergenic | 30.0% | |
| TTAGCATAAAGATAGACTCT+AGG | - | chr6_1:91893496-91893515 | None:intergenic | 30.0% | |
| TGCTCTTATGATACATGTTA+AGG | + | chr6_1:91893728-91893747 | Msa0898320:intron | 30.0% | |
| AAATGTGAGTCATTAGTAGA+TGG | - | chr6_1:91894182-91894201 | None:intergenic | 30.0% | |
| ATACACAAAATGGAATGAGT+TGG | + | chr6_1:91894324-91894343 | Msa0898320:CDS | 30.0% | |
| ! | AACATTGCTTTGTTAACTCA+AGG | + | chr6_1:91894373-91894392 | Msa0898320:CDS | 30.0% |
| TATTCTTGTAGTTGACATGT+TGG | + | chr6_1:91894574-91894593 | Msa0898320:intron | 30.0% | |
| !! | TGAATTAGATTTGTTGCAGT+CGG | - | chr6_1:91894751-91894770 | None:intergenic | 30.0% |
| AATTATAGGTGATCAAACTG+TGG | + | chr6_1:91894979-91894998 | Msa0898320:intron | 30.0% | |
| AAAGGAAATCCATTTGCATT+TGG | - | chr6_1:91895166-91895185 | None:intergenic | 30.0% | |
| !! | AATGCAAATGGATTTCCTTT+TGG | + | chr6_1:91895166-91895185 | Msa0898320:CDS | 30.0% |
| TTCAACAGCTCAGATTTATT+TGG | + | chr6_1:91895348-91895367 | Msa0898320:three_prime_UTR | 30.0% | |
| GAATTTAATGGGATAGGATT+AGG | - | chr6_1:91895454-91895473 | None:intergenic | 30.0% | |
| TTGTAGGAATTTAATGGGAT+AGG | - | chr6_1:91895460-91895479 | None:intergenic | 30.0% | |
| ! | AAAAGAAGTTGCTTTGATCT+TGG | + | chr6_1:91895557-91895576 | Msa0898320:three_prime_UTR | 30.0% |
| ! | AAAGAAGTTGCTTTGATCTT+GGG | + | chr6_1:91895558-91895577 | Msa0898320:three_prime_UTR | 30.0% |
| AATTAGGTTTAGTGTAAAGG+TGG | + | chr6_1:91895619-91895638 | Msa0898320:three_prime_UTR | 30.0% | |
| CTGCAAAAATGGCTACTAAA+AGG | + | chr6_1:91889535-91889554 | Msa0898320:exon | 35.0% | |
| !! | TGTGGTTAACTTGTTTCTCA+TGG | + | chr6_1:91889970-91889989 | Msa0898320:intron | 35.0% |
| !! | GTGGTTAACTTGTTTCTCAT+GGG | + | chr6_1:91889971-91889990 | Msa0898320:intron | 35.0% |
| !! | TAACTTGTTTCTCATGGGTT+AGG | + | chr6_1:91889976-91889995 | Msa0898320:intron | 35.0% |
| ! | AACTTGTTTCTCATGGGTTA+GGG | + | chr6_1:91889977-91889996 | Msa0898320:intron | 35.0% |
| AAGATGGTCCAATGTTAAAC+CGG | + | chr6_1:91890305-91890324 | Msa0898320:intron | 35.0% | |
| ATATGGATCCGGTTTAACAT+TGG | - | chr6_1:91890316-91890335 | None:intergenic | 35.0% | |
| TTGTGGTATGAATAGCTATG+CGG | - | chr6_1:91890458-91890477 | None:intergenic | 35.0% | |
| !!! | TAGGTGAAGTTGGTTTTTTG+TGG | - | chr6_1:91890475-91890494 | None:intergenic | 35.0% |
| TAATGAAGGTGACCTATTGA+TGG | - | chr6_1:91890677-91890696 | None:intergenic | 35.0% | |
| ATTAAGAATCCAAGCACCAA+GGG | + | chr6_1:91890693-91890712 | Msa0898320:CDS | 35.0% | |
| TTGAATGAGAGTTGTAAGGT+TGG | - | chr6_1:91890727-91890746 | None:intergenic | 35.0% | |
| AACTCTAACTATCTAAGGGT+TGG | - | chr6_1:91890814-91890833 | None:intergenic | 35.0% | |
| GTTGAAACTTGAAATAGTGC+CGG | + | chr6_1:91890846-91890865 | Msa0898320:intron | 35.0% | |
| CGGAAGTTTAGAGATAGAAA+AGG | + | chr6_1:91890866-91890885 | Msa0898320:intron | 35.0% | |
| GTTAGCGACTAAATTAGAGA+TGG | - | chr6_1:91890898-91890917 | None:intergenic | 35.0% | |
| ! | ATGCTTTTAAATAGGCTAGC+AGG | + | chr6_1:91891726-91891745 | Msa0898320:intron | 35.0% |
| CTGTCCTGTCAAAAGATTTA+AGG | - | chr6_1:91891826-91891845 | None:intergenic | 35.0% | |
| ATTCTACTACCTGTGAAAGT+TGG | - | chr6_1:91892012-91892031 | None:intergenic | 35.0% | |
| TCAACAAGACTTATGCAGAT+AGG | - | chr6_1:91892054-91892073 | None:intergenic | 35.0% | |
| !! | GAAGACTTGTTGGAACAATT+TGG | - | chr6_1:91892092-91892111 | None:intergenic | 35.0% |
| !! | ATCTCTAGCTTTATAGGGTA+AGG | - | chr6_1:91892114-91892133 | None:intergenic | 35.0% |
| CTAGAGATTGTTGTACTTGA+TGG | + | chr6_1:91892126-91892145 | Msa0898320:CDS | 35.0% | |
| TACATAGTGAAGGAAAGAAC+TGG | + | chr6_1:91892201-91892220 | Msa0898320:CDS | 35.0% | |
| ACATAGTGAAGGAAAGAACT+GGG | + | chr6_1:91892202-91892221 | Msa0898320:CDS | 35.0% | |
| GAATTGAACCTTACTATGAG+AGG | + | chr6_1:91892246-91892265 | Msa0898320:CDS | 35.0% | |
| AGTTCACAGATAATTCTAGC+TGG | + | chr6_1:91892295-91892314 | Msa0898320:CDS | 35.0% | |
| ! | CAGATAATTCTAGCTGGATA+AGG | + | chr6_1:91892301-91892320 | Msa0898320:CDS | 35.0% |
| ! | ATGGGAGTAATCAAAGTGTT+AGG | + | chr6_1:91892358-91892377 | Msa0898320:CDS | 35.0% |
| ! | CAAAGTGTTAGGATTCAAGA+AGG | + | chr6_1:91892369-91892388 | Msa0898320:CDS | 35.0% |
| !! | TTTGTTGTTAAGGATCATCG+TGG | + | chr6_1:91892405-91892424 | Msa0898320:CDS | 35.0% |
| AGCTTTCCATCACAAAATGA+TGG | + | chr6_1:91893351-91893370 | Msa0898320:CDS | 35.0% | |
| ! | AAGATAGACTCTAGGAAATG+TGG | - | chr6_1:91893488-91893507 | None:intergenic | 35.0% |
| ACGCTAATTGCACATGTTAA+AGG | - | chr6_1:91893860-91893879 | None:intergenic | 35.0% | |
| ! | TGAAATCAGATTTTGGGCAT+GGG | + | chr6_1:91893958-91893977 | Msa0898320:intron | 35.0% |
| TTCAGAAGAATGGTAAACTG+AGG | - | chr6_1:91894066-91894085 | None:intergenic | 35.0% | |
| GCATATTGGATTCAGAAGAA+TGG | - | chr6_1:91894076-91894095 | None:intergenic | 35.0% | |
| GTACTTGAGCCAAATGAATA+AGG | + | chr6_1:91894143-91894162 | Msa0898320:CDS | 35.0% | |
| ! | TTGGAGAAGCATACACAAAA+TGG | + | chr6_1:91894314-91894333 | Msa0898320:CDS | 35.0% |
| ! | AATGAGTTGGAGGAAATTGA+TGG | + | chr6_1:91894337-91894356 | Msa0898320:CDS | 35.0% |
| GATCATATACTCATACTGGT+TGG | + | chr6_1:91894507-91894526 | Msa0898320:intron | 35.0% | |
| ! | CATATTGGTCATATCGGTTA+AGG | - | chr6_1:91894711-91894730 | None:intergenic | 35.0% |
| ATCTCGTACAAAACTAGTAG+AGG | + | chr6_1:91894818-91894837 | Msa0898320:intron | 35.0% | |
| ACCAAGCAATAATGCACAAA+TGG | + | chr6_1:91895099-91895118 | Msa0898320:CDS | 35.0% | |
| AAATGTACTAATTTCGGACC+TGG | + | chr6_1:91895272-91895291 | Msa0898320:exon | 35.0% | |
| TGAGATCAAACGGTGAAAAA+TGG | - | chr6_1:91895374-91895393 | None:intergenic | 35.0% | |
| ! | CAAAACATGCCGAACCTTTT+AGG | + | chr6_1:91889814-91889833 | Msa0898320:CDS | 40.0% |
| TCCAAAGCTCCTAAAAGGTT+CGG | - | chr6_1:91889826-91889845 | None:intergenic | 40.0% | |
| AAGGTTCCAAAGCTCCTAAA+AGG | - | chr6_1:91889831-91889850 | None:intergenic | 40.0% | |
| TGCATCTGTGTCAAATGTCA+TGG | - | chr6_1:91889888-91889907 | None:intergenic | 40.0% | |
| GCTTCATAGTTAGGTGAAGT+TGG | - | chr6_1:91890485-91890504 | None:intergenic | 40.0% | |
| ATTTGGTTAGGTGAGTGAAG+AGG | + | chr6_1:91890618-91890637 | Msa0898320:intron | 40.0% | |
| GGTGCTTGGATTCTTAATGA+AGG | - | chr6_1:91890691-91890710 | None:intergenic | 40.0% | |
| CATTAAGAATCCAAGCACCA+AGG | + | chr6_1:91890692-91890711 | Msa0898320:CDS | 40.0% | |
| CATACCTGTGAAAATTGGGA+GGG | - | chr6_1:91890761-91890780 | None:intergenic | 40.0% | |
| TCATACCTGTGAAAATTGGG+AGG | - | chr6_1:91890762-91890781 | None:intergenic | 40.0% | |
| TATGTCTCTATAGAGCGATC+TGG | - | chr6_1:91890940-91890959 | None:intergenic | 40.0% | |
| CATCAGACTTTCAAGAGATC+AGG | + | chr6_1:91891752-91891771 | Msa0898320:intron | 40.0% | |
| ! | TAAGGCTTAAGCATTGTCAG+CGG | - | chr6_1:91891808-91891827 | None:intergenic | 40.0% |
| ! | TCTTTTGACAGGACAGACTT+AGG | + | chr6_1:91891830-91891849 | Msa0898320:intron | 40.0% |
| AGTAAGGGTGGGAATAGATT+AGG | - | chr6_1:91891876-91891895 | None:intergenic | 40.0% | |
| ACTCTACGATTAGTAAGGGT+GGG | - | chr6_1:91891887-91891906 | None:intergenic | 40.0% | |
| AACTCTACGATTAGTAAGGG+TGG | - | chr6_1:91891888-91891907 | None:intergenic | 40.0% | |
| GGCAACTCTACGATTAGTAA+GGG | - | chr6_1:91891891-91891910 | None:intergenic | 40.0% | |
| TGGCAACTCTACGATTAGTA+AGG | - | chr6_1:91891892-91891911 | None:intergenic | 40.0% | |
| TTGGAACGAAGTTATCTCAG+TGG | - | chr6_1:91891993-91892012 | None:intergenic | 40.0% | |
| AACTTCGTTCCAACTTTCAC+AGG | + | chr6_1:91892000-91892019 | Msa0898320:intron | 40.0% | |
| ATAGGGTAAGGAAGACTTGT+TGG | - | chr6_1:91892102-91892121 | None:intergenic | 40.0% | |
| TTGAACCTTACTATGAGAGG+TGG | + | chr6_1:91892249-91892268 | Msa0898320:CDS | 40.0% | |
| CAATTCCACCTCTCATAGTA+AGG | - | chr6_1:91892257-91892276 | None:intergenic | 40.0% | |
| GTGAACTCTATGTCTCCAAT+TGG | - | chr6_1:91892282-91892301 | None:intergenic | 40.0% | |
| GATAAGGAGCAGGAAGTTTA+GGG | + | chr6_1:91892317-91892336 | Msa0898320:CDS | 40.0% | |
| ! | GAAGTTTAGGGTTGCAGTTA+TGG | + | chr6_1:91892329-91892348 | Msa0898320:CDS | 40.0% |
| TTGCAGTTATGGTGAGTCAT+GGG | + | chr6_1:91892340-91892359 | Msa0898320:CDS | 40.0% | |
| !! | GACTGAGGCATTTGTTGTTA+AGG | + | chr6_1:91892395-91892414 | Msa0898320:CDS | 40.0% |
| ACCCACTTATTATGGAACAG+AGG | + | chr6_1:91893015-91893034 | Msa0898320:intron | 40.0% | |
| CCCTCTGTTCCATAATAAGT+GGG | - | chr6_1:91893019-91893038 | None:intergenic | 40.0% | |
| CCCACTTATTATGGAACAGA+GGG | + | chr6_1:91893016-91893035 | Msa0898320:intron | 40.0% | |
| TCCCTCTGTTCCATAATAAG+TGG | - | chr6_1:91893020-91893039 | None:intergenic | 40.0% | |
| TATGGAACAGAGGGAGTAAT+AGG | + | chr6_1:91893025-91893044 | Msa0898320:intron | 40.0% | |
| ATGGAACAGAGGGAGTAATA+GGG | + | chr6_1:91893026-91893045 | Msa0898320:intron | 40.0% | |
| AAACATCATCCACCAATGCT+TGG | + | chr6_1:91893289-91893308 | Msa0898320:CDS | 40.0% | |
| CATCTTTCCCTATCTTCTCT+AGG | - | chr6_1:91893330-91893349 | None:intergenic | 40.0% | |
| CTAGAGAAGATAGGGAAAGA+TGG | + | chr6_1:91893328-91893347 | Msa0898320:CDS | 40.0% | |
| CATCACAAAATGATGGCCAA+GGG | + | chr6_1:91893358-91893377 | Msa0898320:CDS | 40.0% | |
| ATCACAAAATGATGGCCAAG+GGG | + | chr6_1:91893359-91893378 | Msa0898320:CDS | 40.0% | |
| TGATACTCCAAAGCTAAGAG+AGG | + | chr6_1:91893420-91893439 | Msa0898320:CDS | 40.0% | |
| ! | CTGAAATCAGATTTTGGGCA+TGG | + | chr6_1:91893957-91893976 | Msa0898320:intron | 40.0% |
| ! | GAAATCAGATTTTGGGCATG+GGG | + | chr6_1:91893959-91893978 | Msa0898320:intron | 40.0% |
| ! | CATGCAATGACTTGTGACAT+GGG | + | chr6_1:91894015-91894034 | Msa0898320:CDS | 40.0% |
| ! | ATGCAATGACTTGTGACATG+GGG | + | chr6_1:91894016-91894035 | Msa0898320:CDS | 40.0% |
| ! | CACAAAATGGAATGAGTTGG+AGG | + | chr6_1:91894327-91894346 | Msa0898320:CDS | 40.0% |
| ACTGTTGCTGGATGATTGTT+TGG | - | chr6_1:91895013-91895032 | None:intergenic | 40.0% | |
| TATGTTGTTGCTACTGTTGC+TGG | - | chr6_1:91895025-91895044 | None:intergenic | 40.0% | |
| GCCATTTGTGCATTATTGCT+TGG | - | chr6_1:91895103-91895122 | None:intergenic | 40.0% | |
| !! | TGCATTTGGTGTTGTGGTAT+AGG | - | chr6_1:91895152-91895171 | None:intergenic | 40.0% |
| ACCACAACACCAAATGCAAA+TGG | + | chr6_1:91895154-91895173 | Msa0898320:CDS | 40.0% | |
| !! | TCCATTTGCATTTGGTGTTG+TGG | - | chr6_1:91895158-91895177 | None:intergenic | 40.0% |
| TGAACCCATTAATGTCCCTA+AGG | - | chr6_1:91895240-91895259 | None:intergenic | 40.0% | |
| GGTCTCATTCGTTTGTCGTT+TGG | - | chr6_1:91889597-91889616 | None:intergenic | 45.0% | |
| AGTGCGTACGAAGCTAAAGA+AGG | - | chr6_1:91889618-91889637 | None:intergenic | 45.0% | |
| !! | TGTTTCTCATGGGTTAGGGT+TGG | + | chr6_1:91889981-91890000 | Msa0898320:intron | 45.0% |
| !! | GTTTCTCATGGGTTAGGGTT+GGG | + | chr6_1:91889982-91890001 | Msa0898320:intron | 45.0% |
| !! | TTTCTCATGGGTTAGGGTTG+GGG | + | chr6_1:91889983-91890002 | Msa0898320:intron | 45.0% |
| TATGCGGAGACTACTGCAAT+TGG | - | chr6_1:91890442-91890461 | None:intergenic | 45.0% | |
| GAAGAGGTGGATAGAGCAAT+TGG | + | chr6_1:91890634-91890653 | Msa0898320:CDS | 45.0% | |
| GCTTTCCACCTTCCATCAAT+AGG | + | chr6_1:91890662-91890681 | Msa0898320:CDS | 45.0% | |
| GAAGGTGACCTATTGATGGA+AGG | - | chr6_1:91890673-91890692 | None:intergenic | 45.0% | |
| ! | AAGGTTGGTTGTTGATCCCT+TGG | - | chr6_1:91890712-91890731 | None:intergenic | 45.0% |
| ! | CTTTCCCTCCCAATTTTCAC+AGG | + | chr6_1:91890754-91890773 | Msa0898320:CDS | 45.0% |
| TAGTCGCTAACTGTTAGGGA+TGG | + | chr6_1:91890907-91890926 | Msa0898320:intron | 45.0% | |
| AGTCGCTAACTGTTAGGGAT+GGG | + | chr6_1:91890908-91890927 | Msa0898320:intron | 45.0% | |
| ! | GTTGGCCTGATAGGATTAAG+AGG | - | chr6_1:91891077-91891096 | None:intergenic | 45.0% |
| AGGTCGAGTTAGACTTTGCA+AGG | - | chr6_1:91891856-91891875 | None:intergenic | 45.0% | |
| AGTAGAATACTCGACGCTGA+AGG | + | chr6_1:91892024-91892043 | Msa0898320:CDS | 45.0% | |
| GGGAAGAGACCATTACTTTC+TGG | + | chr6_1:91892222-91892241 | Msa0898320:CDS | 45.0% | |
| AGAGGTGGAATTGCACCAAT+TGG | + | chr6_1:91892264-91892283 | Msa0898320:CDS | 45.0% | |
| ! | ATTCTAGCTGGATAAGGAGC+AGG | + | chr6_1:91892307-91892326 | Msa0898320:CDS | 45.0% |
| GGATAAGGAGCAGGAAGTTT+AGG | + | chr6_1:91892316-91892335 | Msa0898320:CDS | 45.0% | |
| GTTGCAGTTATGGTGAGTCA+TGG | + | chr6_1:91892339-91892358 | Msa0898320:CDS | 45.0% | |
| ! | GATTCAAGAAGGCATGACTG+AGG | + | chr6_1:91892380-91892399 | Msa0898320:CDS | 45.0% |
| ! | CCTTGGCCATCATTTTGTGA+TGG | - | chr6_1:91893360-91893379 | None:intergenic | 45.0% |
| CCATCACAAAATGATGGCCA+AGG | + | chr6_1:91893357-91893376 | Msa0898320:CDS | 45.0% | |
| TGGGGATGTCTGATAGAATG+TGG | + | chr6_1:91893977-91893996 | Msa0898320:CDS | 45.0% | |
| ! | GCATGCAATGACTTGTGACA+TGG | + | chr6_1:91894014-91894033 | Msa0898320:CDS | 45.0% |
| ACATGGGGAGCAAGATCTAT+AGG | + | chr6_1:91894031-91894050 | Msa0898320:CDS | 45.0% | |
| ! | AGCAAGATCTATAGGTACCG+TGG | + | chr6_1:91894039-91894058 | Msa0898320:CDS | 45.0% |
| GAATGGTAAACTGAGGTCCA+CGG | - | chr6_1:91894059-91894078 | None:intergenic | 45.0% | |
| CCACTACAACATGTCTTGTG+TGG | - | chr6_1:91894543-91894562 | None:intergenic | 45.0% | |
| CCACACAAGACATGTTGTAG+TGG | + | chr6_1:91894540-91894559 | Msa0898320:intron | 45.0% | |
| !!! | GGATTTCCTTTTGGCTTCAC+AGG | + | chr6_1:91895175-91895194 | Msa0898320:CDS | 45.0% |
| TCAGGCCTTAGGGACATTAA+TGG | + | chr6_1:91895232-91895251 | Msa0898320:CDS | 45.0% | |
| CAGGCCTTAGGGACATTAAT+GGG | + | chr6_1:91895233-91895252 | Msa0898320:CDS | 45.0% | |
| !! | GGGACATTAATGGGTTCACA+AGG | + | chr6_1:91895242-91895261 | Msa0898320:CDS | 45.0% |
| GATCGATGGCTGAGATCAAA+CGG | - | chr6_1:91895384-91895403 | None:intergenic | 45.0% | |
| CGACCAAGATCTATTACAGC+AGG | + | chr6_1:91895414-91895433 | Msa0898320:three_prime_UTR | 45.0% | |
| CGTCCTGCTGTAATAGATCT+TGG | - | chr6_1:91895420-91895439 | None:intergenic | 45.0% | |
| ATAGGTAAGCTACGTACGAG+TGG | + | chr6_1:91895501-91895520 | Msa0898320:three_prime_UTR | 45.0% | |
| AGGTTTAGTGTAAAGGTGGC+AGG | + | chr6_1:91895623-91895642 | Msa0898320:three_prime_UTR | 45.0% | |
| GGTTTAGTGTAAAGGTGGCA+GGG | + | chr6_1:91895624-91895643 | Msa0898320:three_prime_UTR | 45.0% | |
| !!! | ATTCATTTTTTTATTAAAAA+TGG | - | chr6_1:91890237-91890256 | None:intergenic | 5.0% |
| !!! | ATATTTTATTAAAAATAAGA+TGG | + | chr6_1:91890289-91890308 | Msa0898320:intron | 5.0% |
| !! | GCCGAACCTTTTAGGAGCTT+TGG | + | chr6_1:91889822-91889841 | Msa0898320:CDS | 50.0% |
| TGGTTAGGTGAGTGAAGAGG+TGG | + | chr6_1:91890621-91890640 | Msa0898320:intron | 50.0% | |
| GGTGACCTATTGATGGAAGG+TGG | - | chr6_1:91890670-91890689 | None:intergenic | 50.0% | |
| !! | GTTGTTGATCCCTTGGTGCT+TGG | - | chr6_1:91890705-91890724 | None:intergenic | 50.0% |
| !! | TGGCTTGGTCTGTCTGTCAT+AGG | - | chr6_1:91890971-91890990 | None:intergenic | 50.0% |
| !! | CCTAAGTAGGTTGGCCTGAT+AGG | - | chr6_1:91891086-91891105 | None:intergenic | 50.0% |
| CCTATCAGGCCAACCTACTT+AGG | + | chr6_1:91891083-91891102 | Msa0898320:intron | 50.0% | |
| !! | ACATCATCGCCAAGCATTGG+TGG | - | chr6_1:91893301-91893320 | None:intergenic | 50.0% |
| CACACATCATCGCCAAGCAT+TGG | - | chr6_1:91893304-91893323 | None:intergenic | 50.0% | |
| CAATGCTTGGCGATGATGTG+TGG | + | chr6_1:91893302-91893321 | Msa0898320:CDS | 50.0% | |
| TGTGGCGCCTAGAGAAGATA+GGG | + | chr6_1:91893320-91893339 | Msa0898320:CDS | 50.0% | |
| GATGGCCAAGGGGATCAAAA+CGG | + | chr6_1:91893369-91893388 | Msa0898320:CDS | 50.0% | |
| !! | TTGCACCGTTTTGATCCCCT+TGG | - | chr6_1:91893377-91893396 | None:intergenic | 50.0% |
| TTGGCTCAAGTACTCTCTGC+TGG | - | chr6_1:91894136-91894155 | None:intergenic | 50.0% | |
| CACAAATGGCAAGCAGTGAG+TGG | + | chr6_1:91895113-91895132 | Msa0898320:CDS | 50.0% | |
| TGTGAGCCTGTGAAGCCAAA+AGG | - | chr6_1:91895184-91895203 | None:intergenic | 50.0% | |
| CACAGGCTCACAATCAGATG+AGG | + | chr6_1:91895192-91895211 | Msa0898320:CDS | 50.0% | |
| GATGAGGACATGACACCTTC+AGG | + | chr6_1:91895208-91895227 | Msa0898320:CDS | 50.0% | |
| ! | GACATGACACCTTCAGGTTC+AGG | + | chr6_1:91895214-91895233 | Msa0898320:CDS | 50.0% |
| ! | ACCTTCAGGTTCAGGCCTTA+GGG | + | chr6_1:91895222-91895241 | Msa0898320:CDS | 50.0% |
| GTGTGGCGCCTAGAGAAGAT+AGG | + | chr6_1:91893319-91893338 | Msa0898320:CDS | 55.0% | |
| ! | CACCTTCAGGTTCAGGCCTT+AGG | + | chr6_1:91895221-91895240 | Msa0898320:CDS | 55.0% |
| TCCCTAAGGCCTGAACCTGA+AGG | - | chr6_1:91895226-91895245 | None:intergenic | 55.0% | |
| GCAGTTACAGCAAGCGATCC+AGG | - | chr6_1:91895293-91895312 | None:intergenic | 55.0% | |
| CTCAGCCATCGATCGCAGAT+CGG | + | chr6_1:91895390-91895409 | Msa0898320:three_prime_UTR | 55.0% | |
| GGTGGCAGGGACTAATGTTG+TGG | + | chr6_1:91895637-91895656 | Msa0898320:three_prime_UTR | 55.0% | |
| !! | CTCATGGGTTAGGGTTGGGG+TGG | + | chr6_1:91889986-91890005 | Msa0898320:intron | 60.0% |
| GTCGTCCGATCTGCGATCGA+TGG | - | chr6_1:91895398-91895417 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 91889470 | 91895680 | 91889470 | ID=Msa0898320;Name=Msa0898320 |
| chr6_1 | mRNA | 91889470 | 91895680 | 91889470 | ID=Msa0898320-mRNA-1;Parent=Msa0898320;Name=Msa0898320-mRNA-1;_AED=0.22;_eAED=0.22;_QI=73|1|1|1|1|1|8|407|488 |
| chr6_1 | exon | 91889470 | 91889628 | 91889470 | ID=Msa0898320-mRNA-1:exon:15555;Parent=Msa0898320-mRNA-1 |
| chr6_1 | exon | 91889789 | 91889864 | 91889789 | ID=Msa0898320-mRNA-1:exon:15556;Parent=Msa0898320-mRNA-1 |
| chr6_1 | exon | 91890628 | 91890775 | 91890628 | ID=Msa0898320-mRNA-1:exon:15557;Parent=Msa0898320-mRNA-1 |
| chr6_1 | exon | 91892022 | 91892432 | 91892022 | ID=Msa0898320-mRNA-1:exon:15558;Parent=Msa0898320-mRNA-1 |
| chr6_1 | exon | 91893281 | 91893441 | 91893281 | ID=Msa0898320-mRNA-1:exon:15559;Parent=Msa0898320-mRNA-1 |
| chr6_1 | exon | 91893967 | 91894164 | 91893967 | ID=Msa0898320-mRNA-1:exon:15560;Parent=Msa0898320-mRNA-1 |
| chr6_1 | exon | 91894295 | 91894394 | 91894295 | ID=Msa0898320-mRNA-1:exon:15561;Parent=Msa0898320-mRNA-1 |
| chr6_1 | exon | 91894987 | 91895680 | 91894987 | ID=Msa0898320-mRNA-1:exon:15562;Parent=Msa0898320-mRNA-1 |
| chr6_1 | five_prime_UTR | 91889470 | 91889542 | 91889470 | ID=Msa0898320-mRNA-1:five_prime_utr;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91889543 | 91889628 | 91889543 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91889789 | 91889864 | 91889789 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91890628 | 91890775 | 91890628 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91892022 | 91892432 | 91892022 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91893281 | 91893441 | 91893281 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91893967 | 91894164 | 91893967 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91894295 | 91894394 | 91894295 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | CDS | 91894987 | 91895273 | 91894987 | ID=Msa0898320-mRNA-1:cds;Parent=Msa0898320-mRNA-1 |
| chr6_1 | three_prime_UTR | 91895274 | 91895680 | 91895274 | ID=Msa0898320-mRNA-1:three_prime_utr;Parent=Msa0898320-mRNA-1 |
| Gene Sequence |
| Protein sequence |
