Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845850 | XP_003613825.1 | 67.914 | 374 | 73 | 5 | 1 | 343 | 1 | 358 | 1.96e-150 | 449 |
| Msa0845850 | XP_003613825.1 | 76.744 | 344 | 29 | 4 | 342 | 635 | 1 | 343 | 3.41e-162 | 479 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845850 | sp|Q8W1E3|CDF1_ARATH | 38.115 | 244 | 91 | 8 | 432 | 622 | 27 | 263 | 1.13e-29 | 122 |
| Msa0845850 | sp|Q8W1E3|CDF1_ARATH | 29.893 | 281 | 140 | 10 | 106 | 342 | 25 | 292 | 1.35e-16 | 84.3 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845850 | G7KGL7 | 67.914 | 374 | 73 | 5 | 1 | 343 | 1 | 358 | 9.38e-151 | 449 |
| Msa0845850 | G7KGL7 | 76.744 | 344 | 29 | 4 | 342 | 635 | 1 | 343 | 1.63e-162 | 479 |
| Gene ID | Type | Classification |
|---|---|---|
| Msa0845850 | TF | C2C2-Dof |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0725790 | Msa0845850 | 0.910997 | 1.000146e-82 | -8.615850e-47 |
| Msa0766600 | Msa0845850 | 0.914778 | 1.285719e-84 | -8.615850e-47 |
| Msa0792480 | Msa0845850 | 0.815619 | 8.425760e-52 | -8.615850e-47 |
| Msa0845850 | Msa1009990 | 0.811493 | 6.812179e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845850 | MtrunA17_Chr5g0417561 | 76.744 | 344 | 29 | 4 | 342 | 635 | 1 | 343 | 3.14e-166 | 479 |
| Msa0845850 | MtrunA17_Chr5g0417561 | 67.914 | 374 | 73 | 5 | 1 | 343 | 1 | 358 | 1.81e-154 | 449 |
| Msa0845850 | MtrunA17_Chr5g0417551 | 71.733 | 375 | 59 | 6 | 1 | 340 | 1 | 363 | 1.56e-164 | 475 |
| Msa0845850 | MtrunA17_Chr5g0417551 | 73.789 | 351 | 35 | 4 | 342 | 635 | 1 | 351 | 6.83e-160 | 463 |
| Msa0845850 | MtrunA17_Chr5g0417601 | 55.759 | 382 | 124 | 12 | 1 | 343 | 1 | 376 | 4.03e-98 | 305 |
| Msa0845850 | MtrunA17_Chr5g0417601 | 53.639 | 371 | 86 | 13 | 342 | 635 | 1 | 362 | 8.65e-87 | 276 |
| Msa0845850 | MtrunA17_Chr5g0417571 | 57.190 | 306 | 83 | 9 | 1 | 265 | 1 | 299 | 5.96e-72 | 235 |
| Msa0845850 | MtrunA17_Chr5g0417571 | 59.273 | 275 | 56 | 9 | 342 | 566 | 1 | 269 | 1.04e-66 | 221 |
| Msa0845850 | MtrunA17_Chr4g0042481 | 31.743 | 482 | 160 | 23 | 4 | 343 | 6 | 460 | 4.15e-31 | 127 |
| Msa0845850 | MtrunA17_Chr4g0042481 | 39.873 | 158 | 61 | 4 | 345 | 484 | 6 | 147 | 2.21e-17 | 85.5 |
| Msa0845850 | MtrunA17_Chr4g0042481 | 48.810 | 84 | 25 | 3 | 566 | 631 | 359 | 442 | 2.27e-11 | 66.6 |
| Msa0845850 | MtrunA17_Chr7g0217581 | 26.692 | 517 | 185 | 21 | 296 | 635 | 65 | 564 | 7.46e-24 | 106 |
| Msa0845850 | MtrunA17_Chr7g0217581 | 25.767 | 489 | 203 | 19 | 2 | 342 | 101 | 577 | 9.97e-19 | 90.1 |
| Msa0845850 | MtrunA17_Chr3g0092111 | 31.845 | 336 | 94 | 16 | 430 | 630 | 107 | 442 | 2.89e-21 | 97.4 |
| Msa0845850 | MtrunA17_Chr3g0092111 | 36.000 | 150 | 54 | 7 | 224 | 342 | 321 | 459 | 3.74e-11 | 65.9 |
| Msa0845850 | MtrunA17_Chr6g0453321 | 41.221 | 131 | 31 | 6 | 415 | 513 | 97 | 213 | 5.69e-14 | 74.7 |
| Msa0845850 | MtrunA17_Chr8g0355261 | 35.374 | 147 | 73 | 6 | 345 | 484 | 12 | 143 | 2.99e-12 | 69.3 |
| Msa0845850 | MtrunA17_Chr6g0460731 | 54.098 | 61 | 22 | 2 | 429 | 483 | 60 | 120 | 7.77e-12 | 67.4 |
| Msa0845850 | MtrunA17_Chr2g0283811 | 69.444 | 36 | 11 | 0 | 448 | 483 | 36 | 71 | 1.71e-11 | 63.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0845850 | AT5G62430.1 | 38.115 | 244 | 91 | 8 | 432 | 622 | 27 | 263 | 1.15e-30 | 122 |
| Msa0845850 | AT5G62430.1 | 29.893 | 281 | 140 | 10 | 106 | 342 | 25 | 292 | 1.38e-17 | 84.3 |
| Msa0845850 | AT5G39660.3 | 30.028 | 353 | 105 | 16 | 415 | 633 | 87 | 431 | 2.55e-17 | 85.5 |
| Msa0845850 | AT5G39660.1 | 30.028 | 353 | 105 | 16 | 415 | 633 | 87 | 431 | 2.55e-17 | 85.5 |
| Msa0845850 | AT5G39660.2 | 30.028 | 353 | 105 | 16 | 415 | 633 | 87 | 431 | 2.55e-17 | 85.5 |
| Msa0845850 | AT1G69570.1 | 29.153 | 295 | 105 | 13 | 424 | 624 | 81 | 365 | 1.82e-15 | 79.3 |
| Msa0845850 | AT1G29160.1 | 72.973 | 37 | 10 | 0 | 447 | 483 | 50 | 86 | 5.66e-14 | 70.9 |
| Msa0845850 | AT2G34140.1 | 47.059 | 68 | 30 | 1 | 422 | 483 | 15 | 82 | 4.31e-13 | 68.2 |
| Msa0845850 | AT1G26790.1 | 61.364 | 44 | 17 | 0 | 440 | 483 | 92 | 135 | 1.73e-11 | 66.6 |
| Msa0845850 | AT3G47500.1 | 52.239 | 67 | 31 | 1 | 418 | 483 | 68 | 134 | 4.09e-11 | 66.2 |
Find 116 sgRNAs with CRISPR-Local
Find 428 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCAATGGATTTGCATCTA+TGG | 0.198741 | 5_4:+25256389 | Msa0845850:CDS |
| TTTCAATGGATTTGCATCTA+TGG | 0.224783 | 5_4:+25251480 | Msa0845850:CDS |
| TCTTCAATTCTTAATTTCTT+AGG | 0.243331 | 5_4:-25256303 | None:intergenic |
| TTGTTGTTGTTTCTTTGTTC+TGG | 0.258792 | 5_4:-25250000 | None:intergenic |
| AAACCCTTTGCATCTTCATT+AGG | 0.263138 | 5_4:-25251418 | None:intergenic |
| TCTTCAATTCTCAATTTCTT+AGG | 0.264262 | 5_4:-25251394 | None:intergenic |
| GAACCCTTTGCAGCTTCATT+AGG | 0.275268 | 5_4:-25256327 | None:intergenic |
| GAGGTAGGTTCTTTCCTTGA+TGG | 0.282122 | 5_4:-25255604 | None:intergenic |
| CAACCCAATATAGCATACTA+TGG | 0.283526 | 5_4:+25256141 | Msa0845850:CDS |
| GCAAAAGCTGCCAGAGATAT+TGG | 0.290195 | 5_4:+25250945 | Msa0845850:CDS |
| ACCACCATAGTATGCTATAT+TGG | 0.313954 | 5_4:-25251236 | None:intergenic |
| GGGAGTGTTTAAATCCTCTT+TGG | 0.317886 | 5_4:-25250714 | None:intergenic |
| AACCCTTTGCATCTTCATTA+GGG | 0.318049 | 5_4:-25251417 | None:intergenic |
| AAGCTGCAAAGGGTTCTAAT+TGG | 0.333760 | 5_4:+25256334 | Msa0845850:CDS |
| ATGAGTACTGTCTTGAACTT+TGG | 0.343501 | 5_4:+25255973 | Msa0845850:CDS |
| AACCCTTTGCAGCTTCATTA+GGG | 0.351302 | 5_4:-25256326 | None:intergenic |
| CTTGTCAAGAAAATCAATAT+TGG | 0.352841 | 5_4:+25251118 | Msa0845850:CDS |
| TGCCAGAGATATTGGACTTC+CGG | 0.368326 | 5_4:+25250953 | Msa0845850:CDS |
| ATGAGTAGTGTCTTGACCTT+TGG | 0.369998 | 5_4:+25251064 | Msa0845850:intron |
| AGTGAAGATGAAGACATAAT+AGG | 0.382456 | 5_4:-25251097 | None:intergenic |
| AGTGAAGTTGAAGACATAAT+AGG | 0.397363 | 5_4:-25256006 | None:intergenic |
| ACATGATTCAAAGAGATATA+AGG | 0.401349 | 5_4:+25250222 | Msa0845850:CDS |
| CAACCCAATATAGCATACTA+TGG | 0.408858 | 5_4:+25251232 | Msa0845850:CDS |
| CCACCATAGTATGCTATATT+GGG | 0.415830 | 5_4:-25251235 | None:intergenic |
| GAATTCTTCAAAGAGATATA+AGG | 0.418199 | 5_4:+25255033 | Msa0845850:CDS |
| ATCAATTTCAGGAACAATCA+AGG | 0.419402 | 5_4:+25250645 | Msa0845850:intron |
| CCTTGATAAAGCTGCAGGAT+TGG | 0.440224 | 5_4:-25251551 | None:intergenic |
| TTTGAAGAATTCACTTCAAG+TGG | 0.441472 | 5_4:-25255022 | None:intergenic |
| ACTTTGTTCATCAACTTTCG+TGG | 0.442217 | 5_4:-25255716 | None:intergenic |
| TTCAATGGATTTGCATCTAT+GGG | 0.443267 | 5_4:+25251481 | Msa0845850:CDS |
| TTGCATCTATGGGTGGTGAT+AGG | 0.444216 | 5_4:+25251491 | Msa0845850:CDS |
| ACACAGGATAACACATTGTT+GGG | 0.445576 | 5_4:-25251204 | None:intergenic |
| TTCAATGGATTTGCATCTAT+GGG | 0.445750 | 5_4:+25256390 | Msa0845850:CDS |
| GAAACAGGATAACACATTGC+TGG | 0.451292 | 5_4:-25256114 | None:intergenic |
| TAACACATTGTTGGGTTCCA+TGG | 0.452271 | 5_4:-25251196 | None:intergenic |
| GACACAGGATAACACATTGT+TGG | 0.452547 | 5_4:-25251205 | None:intergenic |
| ATATTGGGTTGGAATGAAAC+AGG | 0.454445 | 5_4:-25256129 | None:intergenic |
| GTTGAATCATTAGTCATCTC+TGG | 0.466384 | 5_4:-25250043 | None:intergenic |
| CTCCGGAAGTCCAATATCTC+TGG | 0.468706 | 5_4:-25250955 | None:intergenic |
| CTCAATAAGGCTTGAAGATG+TGG | 0.477034 | 5_4:-25250738 | None:intergenic |
| CATACTTCTCGTGGTTCCTC+CGG | 0.479008 | 5_4:-25250972 | None:intergenic |
| ATCAATTTCAGAAACCATCA+AGG | 0.479118 | 5_4:+25255590 | Msa0845850:intron |
| GGATCAGAAGGTGAAACATC+TGG | 0.482490 | 5_4:+25256048 | Msa0845850:CDS |
| GGTTCTAATTGGTTAACACT+TGG | 0.486031 | 5_4:+25256345 | Msa0845850:CDS |
| GCAGAAGTGACGGGGCTGGT+TGG | 0.486295 | 5_4:-25250924 | None:intergenic |
| GAAGTTTCTGTTTCTGATGA+GGG | 0.487694 | 5_4:-25250773 | None:intergenic |
| TAACACATTGCTGGGTTCCA+TGG | 0.491823 | 5_4:-25256105 | None:intergenic |
| AACCCAATATAGCATACTAT+GGG | 0.495182 | 5_4:+25256142 | Msa0845850:CDS |
| AAAATGAATGTTGGATCAGA+AGG | 0.495845 | 5_4:+25256036 | Msa0845850:CDS |
| TTTGAAGAATTCACTTCAAG+TGG | 0.499476 | 5_4:-25250196 | None:intergenic |
| GTGGTTGTTTAGTCCCATCA+TGG | 0.499829 | 5_4:+25251254 | Msa0845850:CDS |
| CTCGACAAGAAAATGAATGT+TGG | 0.500402 | 5_4:+25256027 | Msa0845850:CDS |
| GCAGAAGTGACGGGGCTGGT+TGG | 0.505366 | 5_4:-25255833 | None:intergenic |
| TATATCTCTTTGAATCATGT+TGG | 0.511854 | 5_4:-25250219 | None:intergenic |
| AGAAGTTTCTGTTTCTGATG+AGG | 0.515525 | 5_4:-25250774 | None:intergenic |
| AGTTTCTGTTTCTGATGTGG+TGG | 0.517750 | 5_4:-25255680 | None:intergenic |
| CCAATCCTGCAGCTTTATCA+AGG | 0.521791 | 5_4:+25251551 | Msa0845850:CDS |
| TTAGGGAAACATTCAAGAGA+TGG | 0.525491 | 5_4:+25251325 | Msa0845850:intron |
| AGAAGTTTCTGTTTCTGATG+TGG | 0.528428 | 5_4:-25255683 | None:intergenic |
| TTAGGGAAACATTCAAGAGA+TGG | 0.534355 | 5_4:+25256234 | Msa0845850:intron |
| TTTGTTTGGAGCTTTGTCCT+GGG | 0.536610 | 5_4:-25255746 | None:intergenic |
| GACCCTAATGAAGCTGCAAA+GGG | 0.538987 | 5_4:+25256324 | Msa0845850:CDS |
| TTGACGATTATGTGAGGCAT+CGG | 0.539506 | 5_4:-25255950 | None:intergenic |
| TAGGTTGTACGCTCCATGAT+GGG | 0.544678 | 5_4:-25251267 | None:intergenic |
| AAACAGGATAACACATTGCT+GGG | 0.549807 | 5_4:-25256113 | None:intergenic |
| TTAACACTTGGAATCAAAAG+TGG | 0.550116 | 5_4:+25256357 | Msa0845850:CDS |
| TGAGACCTTGATAAAGCTGC+AGG | 0.554542 | 5_4:-25251556 | None:intergenic |
| ATCGTAATCAAGTACTGAGG+TGG | 0.554962 | 5_4:-25250675 | None:intergenic |
| TCATAATCAAGTACTGAGGT+AGG | 0.557713 | 5_4:-25255619 | None:intergenic |
| CATAGTATGCTATATTGGGT+TGG | 0.557895 | 5_4:-25251231 | None:intergenic |
| CATAGTATGCTATATTGGGT+TGG | 0.557895 | 5_4:-25256140 | None:intergenic |
| GTTTCTGTTTCTGATGTGGT+GGG | 0.561237 | 5_4:-25255679 | None:intergenic |
| GTGTTGAAATCCTCTGTGGT+GGG | 0.563237 | 5_4:-25255655 | None:intergenic |
| AGACCCTAATGAAGCTGCAA+AGG | 0.568759 | 5_4:+25256323 | Msa0845850:CDS |
| AGTGTTGAAATCCTCTGTGG+TGG | 0.573158 | 5_4:-25255656 | None:intergenic |
| GACCCTAATGAAGATGCAAA+GGG | 0.573223 | 5_4:+25251415 | Msa0845850:CDS |
| CTAGGAAACAAGAGTGGTGG+AGG | 0.573390 | 5_4:+25251454 | Msa0845850:CDS |
| TTTGTTAGGAGCTTTGTCCT+GGG | 0.573883 | 5_4:-25250837 | None:intergenic |
| GAGAAATCTTCATGAGCAAG+AGG | 0.580785 | 5_4:-25250136 | None:intergenic |
| GAGAAATCTTCATGAGCAAG+AGG | 0.580785 | 5_4:-25254962 | None:intergenic |
| ATAGGTTGTACGCTCCATGA+TGG | 0.581466 | 5_4:-25251268 | None:intergenic |
| TGAACAAAGTGATATTTCCC+AGG | 0.582852 | 5_4:+25255729 | Msa0845850:CDS |
| AATAAGGCTTGAAGATGTGG+TGG | 0.584261 | 5_4:-25250735 | None:intergenic |
| AAACTCAGAGGAACAATCAT+CGG | 0.585405 | 5_4:-25254933 | None:intergenic |
| GGGTTCCATGGAAACTGTTG+TGG | 0.587185 | 5_4:-25251184 | None:intergenic |
| GGGTTCCATGGAAACTGTTG+TGG | 0.589831 | 5_4:-25256093 | None:intergenic |
| AGACCCTAATGAAGATGCAA+AGG | 0.590368 | 5_4:+25251414 | Msa0845850:CDS |
| ACACAAGATTGAGTTGCGAT+AGG | 0.596525 | 5_4:-25251286 | None:intergenic |
| AATAGGAGAATCTGATCCAA+AGG | 0.598047 | 5_4:-25251080 | None:intergenic |
| ATTGGCTTTCAATACTGATG+AGG | 0.608635 | 5_4:-25251533 | None:intergenic |
| TCGTAATCAAGTACTGAGGT+GGG | 0.612458 | 5_4:-25250674 | None:intergenic |
| TGAACAAAGTGATATGTCCC+AGG | 0.620522 | 5_4:+25250820 | Msa0845850:CDS |
| ATAAGGCTTGAAGATGTGGT+GGG | 0.622284 | 5_4:-25250734 | None:intergenic |
| AGCCTCAAAACAAACCAAAG+AGG | 0.625789 | 5_4:+25250700 | Msa0845850:CDS |
| AATGGATTTGCATCTATGGG+TGG | 0.631829 | 5_4:+25251484 | Msa0845850:CDS |
| AATGGATTTGCATCTATGGG+TGG | 0.631829 | 5_4:+25256393 | Msa0845850:CDS |
| ACACTTGGAATCAAAAGTGG+TGG | 0.634859 | 5_4:+25256360 | Msa0845850:CDS |
| ACCTACAAGCATACTTCTCG+TGG | 0.650658 | 5_4:-25250981 | None:intergenic |
| CCCAATATAGCATACTATGG+TGG | 0.653975 | 5_4:+25251235 | Msa0845850:CDS |
| ACACTAGGAAACAAGAGTGG+TGG | 0.656394 | 5_4:+25251451 | Msa0845850:CDS |
| AAATCTTCATGAGCAAGAGG+AGG | 0.659290 | 5_4:-25250133 | None:intergenic |
| AAATCTTCATGAGCAAGAGG+AGG | 0.659290 | 5_4:-25254959 | None:intergenic |
| ATATTGGGTTGGAATGACAC+AGG | 0.664359 | 5_4:-25251220 | None:intergenic |
| ACCCAATATAGCATACTATG+GGG | 0.674775 | 5_4:+25256143 | Msa0845850:CDS |
| ACTCATTTGACGATTATGTG+AGG | 0.678683 | 5_4:-25255956 | None:intergenic |
| CCCAATATAGCATACTATGG+GGG | 0.689551 | 5_4:+25256144 | Msa0845850:CDS |
| CAGAGATATTGGACTTCCGG+AGG | 0.693631 | 5_4:+25250956 | Msa0845850:CDS |
| TTCTTCATAATCAAGTACTG+AGG | 0.698198 | 5_4:-25255623 | None:intergenic |
| GGGTGGTGATAGGAATCATG+TGG | 0.704890 | 5_4:+25251501 | Msa0845850:CDS |
| GGGAGTGTTGAAATCCTCTG+TGG | 0.719304 | 5_4:-25255659 | None:intergenic |
| GGGTGGTGATAAGAATCATG+TGG | 0.719528 | 5_4:+25256410 | Msa0845850:CDS |
| AAGAGGAGGAGAAAACTCAG+AGG | 0.721417 | 5_4:-25250119 | None:intergenic |
| AAGAGGAGGAGAAAACTCAG+AGG | 0.721417 | 5_4:-25254945 | None:intergenic |
| TTCATCGTAATCAAGTACTG+AGG | 0.724323 | 5_4:-25250678 | None:intergenic |
| AGCCTCAAAACCCACCACAG+AGG | 0.733290 | 5_4:+25255645 | Msa0845850:CDS |
| TTAACACTAGGAAACAAGAG+TGG | 0.767808 | 5_4:+25251448 | Msa0845850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAATTACTTATAGTT+AGG | + | chr5_4:25250283-25250302 | Msa0845850:intron | 10.0% |
| !!! | TGAAAAATATACAAAGTTTT+TGG | + | chr5_4:25250458-25250477 | Msa0845850:intron | 15.0% |
| !! | TGATAAACAATAATTAGATT+AGG | - | chr5_4:25250629-25250648 | None:intergenic | 15.0% |
| !! | AATTATTGTTTATCAATTTC+AGG | + | chr5_4:25250634-25250653 | Msa0845850:intron | 15.0% |
| !! | TGAATATTATGTACATATTA+TGG | + | chr5_4:25251883-25251902 | Msa0845850:intron | 15.0% |
| !! | GAATATTATGTACATATTAT+GGG | + | chr5_4:25251884-25251903 | Msa0845850:intron | 15.0% |
| !!! | CTTTTTTTAGAATAAATATC+AGG | + | chr5_4:25251943-25251962 | Msa0845850:intron | 15.0% |
| !!! | TGAATTTAGAATAAATTCTT+TGG | - | chr5_4:25252462-25252481 | None:intergenic | 15.0% |
| !! | TGAATATATAATTAATTGGT+AGG | + | chr5_4:25253442-25253461 | Msa0845850:intron | 15.0% |
| !! | CAATCATAATATCAAATTTA+AGG | - | chr5_4:25254012-25254031 | None:intergenic | 15.0% |
| !! | CTTAAATTTGATATTATGAT+TGG | + | chr5_4:25254010-25254029 | Msa0845850:intron | 15.0% |
| !!! | TTTTATAAAGTTCAAAAAGT+TGG | - | chr5_4:25254711-25254730 | None:intergenic | 15.0% |
| !!! | AAATTTAATTACTTCTAGTT+AGG | + | chr5_4:25255091-25255110 | Msa0845850:intron | 15.0% |
| !!! | TGAAATATATACAATGTTTT+TGG | + | chr5_4:25255154-25255173 | Msa0845850:intron | 15.0% |
| !! | GATTTATTGTGAATTATTAA+TGG | - | chr5_4:25255269-25255288 | None:intergenic | 15.0% |
| !!! | ACTTTGAGTTTATTTTTTAT+TGG | + | chr5_4:25255439-25255458 | Msa0845850:intron | 15.0% |
| !!! | ATGAAAAATATTTAACTTTG+TGG | + | chr5_4:25255531-25255550 | Msa0845850:intron | 15.0% |
| !!! | TTTTGGTGATAAAATTCTTA+TGG | + | chr5_4:25250412-25250431 | Msa0845850:intron | 20.0% |
| !! | ATAGACTTCAAAATATGAAT+TGG | - | chr5_4:25250539-25250558 | None:intergenic | 20.0% |
| !!! | AAGAAGAGATTTTATTCTTA+CGG | - | chr5_4:25251015-25251034 | None:intergenic | 20.0% |
| !! | TGTTGTACATATTATGTAAA+TGG | + | chr5_4:25251811-25251830 | Msa0845850:intron | 20.0% |
| !! | ATTATGACATTTATTTCAGT+TGG | + | chr5_4:25252031-25252050 | Msa0845850:intron | 20.0% |
| !! | TTATGACATTTATTTCAGTT+GGG | + | chr5_4:25252032-25252051 | Msa0845850:intron | 20.0% |
| !!! | TGATTTGTAAAAAAACAAAG+AGG | - | chr5_4:25252080-25252099 | None:intergenic | 20.0% |
| !!! | AGAGTTTATATTTTTCTAAC+AGG | - | chr5_4:25252164-25252183 | None:intergenic | 20.0% |
| !! | TAAACTCTTCTTAGAAAAAA+TGG | + | chr5_4:25252176-25252195 | Msa0845850:intron | 20.0% |
| !! | AAACTCTTCTTAGAAAAAAT+GGG | + | chr5_4:25252177-25252196 | Msa0845850:intron | 20.0% |
| !! | AAGTTGTTATGATTAATCTA+AGG | + | chr5_4:25252200-25252219 | Msa0845850:intron | 20.0% |
| !!! | TTATGTTCAAGTTAATTTTG+AGG | - | chr5_4:25252615-25252634 | None:intergenic | 20.0% |
| !! | ATAAAAAAATGTTCACAATC+AGG | + | chr5_4:25252631-25252650 | Msa0845850:intron | 20.0% |
| !! | TATATAATTAATTGGTAGGA+TGG | + | chr5_4:25253446-25253465 | Msa0845850:intron | 20.0% |
| !! | TTATTATGATATTTACCTGA+TGG | + | chr5_4:25253534-25253553 | Msa0845850:intron | 20.0% |
| !! | TCATCTGAATGATAAAATAT+TGG | + | chr5_4:25253707-25253726 | Msa0845850:intron | 20.0% |
| !! | AGGAAAATTAAGAGAAATTT+CGG | - | chr5_4:25253756-25253775 | None:intergenic | 20.0% |
| !!! | TTTATTTTTGGAGTTGTTTA+AGG | - | chr5_4:25253776-25253795 | None:intergenic | 20.0% |
| !! | TAAACAACTCCAAAAATAAA+TGG | + | chr5_4:25253776-25253795 | Msa0845850:intron | 20.0% |
| !!! | AAAGATCATCCATTTATTTT+TGG | - | chr5_4:25253788-25253807 | None:intergenic | 20.0% |
| !! | AAATTTGATATTATGATTGG+TGG | + | chr5_4:25254013-25254032 | Msa0845850:intron | 20.0% |
| !! | TTGAATAAAATACAGTTCAA+AGG | + | chr5_4:25254392-25254411 | Msa0845850:intron | 20.0% |
| !! | TGAATAAAATACAGTTCAAA+GGG | + | chr5_4:25254393-25254412 | Msa0845850:intron | 20.0% |
| !!! | TTAAAGCATATTTTTAGTTC+AGG | - | chr5_4:25254438-25254457 | None:intergenic | 20.0% |
| !! | TAGCATACAATAAAATGAAA+TGG | + | chr5_4:25254467-25254486 | Msa0845850:intron | 20.0% |
| !! | ACACTATCTTTATATTTATG+TGG | + | chr5_4:25254601-25254620 | Msa0845850:intron | 20.0% |
| !! | CACTATCTTTATATTTATGT+GGG | + | chr5_4:25254602-25254621 | Msa0845850:intron | 20.0% |
| !! | CTTTAAGTAATTGTGATTAA+AGG | + | chr5_4:25255299-25255318 | Msa0845850:intron | 20.0% |
| !! | GAATAAAAAATAATATGAGC+TGG | - | chr5_4:25255368-25255387 | None:intergenic | 20.0% |
| !!! | TATTTTTTATTGGATCTCAT+AGG | + | chr5_4:25255449-25255468 | Msa0845850:intron | 20.0% |
| !! | TTAAATAAAAAGTTAAGAGC+TGG | - | chr5_4:25255475-25255494 | None:intergenic | 20.0% |
| !! | TGATAAACAATGATTAGATT+AGG | - | chr5_4:25255574-25255593 | None:intergenic | 20.0% |
| !! | TCTTCAATTCTTAATTTCTT+AGG | - | chr5_4:25256306-25256325 | None:intergenic | 20.0% |
| !! | ATTCAACCATTAAGCTTTTT+GGG | + | chr5_4:25250059-25250078 | Msa0845850:CDS | 25.0% |
| ! | TATATCTCTTTGAATCATGT+TGG | - | chr5_4:25250222-25250241 | None:intergenic | 25.0% |
| ! | ACATGATTCAAAGAGATATA+AGG | + | chr5_4:25250222-25250241 | Msa0845850:CDS | 25.0% |
| !! | TAACTTTGTGGTTCATATTT+TGG | + | chr5_4:25250598-25250617 | Msa0845850:intron | 25.0% |
| !! | ACTTTGTTCATCAATTTTAG+TGG | - | chr5_4:25250810-25250829 | None:intergenic | 25.0% |
| ! | CTTGTCAAGAAAATCAATAT+TGG | + | chr5_4:25251118-25251137 | Msa0845850:CDS | 25.0% |
| !! | TTCCAAGTAAACCTATTTTA+GGG | + | chr5_4:25251308-25251327 | Msa0845850:intron | 25.0% |
| ! | TCTTCAATTCTCAATTTCTT+AGG | - | chr5_4:25251397-25251416 | None:intergenic | 25.0% |
| !!! | ATGTTTCTGAAATAGATCAT+AGG | + | chr5_4:25251706-25251725 | Msa0845850:intron | 25.0% |
| ! | ACATATTATGTAAATGAGAC+AGG | + | chr5_4:25251817-25251836 | Msa0845850:intron | 25.0% |
| ! | TGTAAAAAAACAAAGAGGTA+TGG | - | chr5_4:25252075-25252094 | None:intergenic | 25.0% |
| !!! | AATAAATTCTTTGGTTTGCT+AGG | - | chr5_4:25252453-25252472 | None:intergenic | 25.0% |
| ! | ATAATTTGACTGAATTTGAC+TGG | + | chr5_4:25252566-25252585 | Msa0845850:intron | 25.0% |
| !! | CATCAATTTCTAATTTGCAT+TGG | + | chr5_4:25252994-25253013 | Msa0845850:intron | 25.0% |
| !!! | AAATTCCTTTTTGCTATTGT+GGG | - | chr5_4:25253033-25253052 | None:intergenic | 25.0% |
| !!! | TAAATTCCTTTTTGCTATTG+TGG | - | chr5_4:25253034-25253053 | None:intergenic | 25.0% |
| ! | ACAATAGCAAAAAGGAATTT+AGG | + | chr5_4:25253033-25253052 | Msa0845850:intron | 25.0% |
| ! | ACTAAATTCAAAGAATCCTT+TGG | + | chr5_4:25253195-25253214 | Msa0845850:intron | 25.0% |
| ! | AATAATCATCGAAGAATACA+AGG | + | chr5_4:25253225-25253244 | Msa0845850:intron | 25.0% |
| !! | TTATCCGACAATTTTAGATA+GGG | - | chr5_4:25253405-25253424 | None:intergenic | 25.0% |
| !! | ATTATCCGACAATTTTAGAT+AGG | - | chr5_4:25253406-25253425 | None:intergenic | 25.0% |
| ! | GGGCTGAATATATAATTAAT+TGG | + | chr5_4:25253438-25253457 | Msa0845850:intron | 25.0% |
| ! | TATTACCATAAAAAGGTTGT+AGG | - | chr5_4:25253578-25253597 | None:intergenic | 25.0% |
| ! | AAACAGCTATTACCATAAAA+AGG | - | chr5_4:25253585-25253604 | None:intergenic | 25.0% |
| ! | TGATAAAATATTGGCATGAT+TGG | + | chr5_4:25253716-25253735 | Msa0845850:intron | 25.0% |
| ! | GGAAAATTAAGAGAAATTTC+GGG | - | chr5_4:25253755-25253774 | None:intergenic | 25.0% |
| !! | TGGATGATCTTTTATCAATT+TGG | + | chr5_4:25253796-25253815 | Msa0845850:intron | 25.0% |
| ! | AAAAAAACTATAGTGCTCTT+AGG | - | chr5_4:25253951-25253970 | None:intergenic | 25.0% |
| ! | ATATCAAATTTAAGGACAGA+GGG | - | chr5_4:25254004-25254023 | None:intergenic | 25.0% |
| ! | AATATCAAATTTAAGGACAG+AGG | - | chr5_4:25254005-25254024 | None:intergenic | 25.0% |
| !!! | TTTTGTAACACTTTTTTGCA+TGG | - | chr5_4:25254132-25254151 | None:intergenic | 25.0% |
| ! | GTAACATTTGAACAATTGTT+AGG | - | chr5_4:25254234-25254253 | None:intergenic | 25.0% |
| !! | TTTCACTCTATTCTTTTAAC+AGG | + | chr5_4:25254358-25254377 | Msa0845850:intron | 25.0% |
| ! | AAAAAGGCAAAAGTTGAAAA+AGG | + | chr5_4:25254539-25254558 | Msa0845850:intron | 25.0% |
| !!! | TTGATAATGAAGAGTTACAA+GGG | - | chr5_4:25254794-25254813 | None:intergenic | 25.0% |
| !!! | TTGTTGTTGTTTTTACTTCT+TGG | - | chr5_4:25254827-25254846 | None:intergenic | 25.0% |
| !! | ATTCAACCATAAAGCTTTTT+GGG | + | chr5_4:25254885-25254904 | Msa0845850:CDS | 25.0% |
| ! | GAATTCTTCAAAGAGATATA+AGG | + | chr5_4:25255033-25255052 | Msa0845850:CDS | 25.0% |
| !! | TTGTTGTTGTTTCTTTGTTC+TGG | - | chr5_4:25250003-25250022 | None:intergenic | 30.0% |
| ! | GATTCAACCATTAAGCTTTT+TGG | + | chr5_4:25250058-25250077 | Msa0845850:CDS | 30.0% |
| TTTGAAGAATTCACTTCAAG+TGG | - | chr5_4:25250199-25250218 | None:intergenic | 30.0% | |
| TAAGTTTCATTGCAATCTTG+TGG | + | chr5_4:25250329-25250348 | Msa0845850:intron | 30.0% | |
| !!! | GTGCACTTTTTTCATCTTTT+TGG | + | chr5_4:25250395-25250414 | Msa0845850:intron | 30.0% |
| TGAAGTCTATAATCCTAAAC+TGG | + | chr5_4:25250549-25250568 | Msa0845850:intron | 30.0% | |
| AATTGCAATCAAACCAGTTT+AGG | - | chr5_4:25250565-25250584 | None:intergenic | 30.0% | |
| ATCAATTTCAGGAACAATCA+AGG | + | chr5_4:25250645-25250664 | Msa0845850:intron | 30.0% | |
| AGTGAAGATGAAGACATAAT+AGG | - | chr5_4:25251100-25251119 | None:intergenic | 30.0% | |
| ! | GTTCCAAGTAAACCTATTTT+AGG | + | chr5_4:25251307-25251326 | Msa0845850:intron | 30.0% |
| TTCCCTAAAATAGGTTTACT+TGG | - | chr5_4:25251313-25251332 | None:intergenic | 30.0% | |
| CTTGAATGTTTCCCTAAAAT+AGG | - | chr5_4:25251322-25251341 | None:intergenic | 30.0% | |
| !! | AAGATGCAAAGGGTTTTAAT+TGG | + | chr5_4:25251425-25251444 | Msa0845850:CDS | 30.0% |
| !!! | GGTTTTAATTGGTTAACACT+AGG | + | chr5_4:25251436-25251455 | Msa0845850:CDS | 30.0% |
| ! | TTTCAATGGATTTGCATCTA+TGG | + | chr5_4:25251480-25251499 | Msa0845850:CDS | 30.0% |
| ! | TTCAATGGATTTGCATCTAT+GGG | + | chr5_4:25251481-25251500 | Msa0845850:CDS | 30.0% |
| ATAACACGATGAATAGACAA+AGG | + | chr5_4:25251843-25251862 | Msa0845850:intron | 30.0% | |
| ! | TCTGATTTGTGACACATTTA+TGG | + | chr5_4:25252237-25252256 | Msa0845850:intron | 30.0% |
| TAAGAGAAAAACACAGTAAG+TGG | - | chr5_4:25252384-25252403 | None:intergenic | 30.0% | |
| ! | ATTCAAGTCTTTTCATGATC+TGG | + | chr5_4:25252477-25252496 | Msa0845850:intron | 30.0% |
| !! | GGTGTAATCTTTGGAATATT+AGG | + | chr5_4:25252498-25252517 | Msa0845850:intron | 30.0% |
| AGATAAAAAGGCAATAGTAG+AGG | - | chr5_4:25252816-25252835 | None:intergenic | 30.0% | |
| TGTTTATGTTCCTAAAACCA+AGG | - | chr5_4:25252845-25252864 | None:intergenic | 30.0% | |
| AGGAACATAAACACTATGTT+TGG | + | chr5_4:25252852-25252871 | Msa0845850:intron | 30.0% | |
| GGAACATAAACACTATGTTT+GGG | + | chr5_4:25252853-25252872 | Msa0845850:intron | 30.0% | |
| ! | TTGATATGCTCCTTTTTACA+AGG | + | chr5_4:25252877-25252896 | Msa0845850:intron | 30.0% |
| ! | GATGTGTTTTCCTTGTAAAA+AGG | - | chr5_4:25252890-25252909 | None:intergenic | 30.0% |
| CAAATCTTTGTAGAAAGAGA+GGG | - | chr5_4:25252912-25252931 | None:intergenic | 30.0% | |
| TCAAATCTTTGTAGAAAGAG+AGG | - | chr5_4:25252913-25252932 | None:intergenic | 30.0% | |
| ! | CATAACAATCTAAAGCAAAC+TGG | - | chr5_4:25253076-25253095 | None:intergenic | 30.0% |
| ! | CAGTTTGCTTTAGATTGTTA+TGG | + | chr5_4:25253074-25253093 | Msa0845850:intron | 30.0% |
| TGAATTTAGTTATCTGTCCT+TGG | - | chr5_4:25253185-25253204 | None:intergenic | 30.0% | |
| ATGATTATTAACCTTGCCAA+AGG | - | chr5_4:25253214-25253233 | None:intergenic | 30.0% | |
| AGGATTTCCAAATTTGCAAT+AGG | + | chr5_4:25253245-25253264 | Msa0845850:intron | 30.0% | |
| ! | TGAATGGTAAACGATTTGTT+GGG | - | chr5_4:25253308-25253327 | None:intergenic | 30.0% |
| TAAATGATCCCTGTATCTTA+AGG | + | chr5_4:25253362-25253381 | Msa0845850:intron | 30.0% | |
| AAATGATCCCTGTATCTTAA+GGG | + | chr5_4:25253363-25253382 | Msa0845850:intron | 30.0% | |
| ! | TCTTAAGGGCTGAATATTTT+AGG | + | chr5_4:25253377-25253396 | Msa0845850:intron | 30.0% |
| !! | TCGGATAATTGATTTGCAAA+CGG | + | chr5_4:25253417-25253436 | Msa0845850:intron | 30.0% |
| ! | GACAGAAAATATAGTTTTCC+CGG | - | chr5_4:25253492-25253511 | None:intergenic | 30.0% |
| TGAAATAAACTAGTTCCATC+AGG | - | chr5_4:25253552-25253571 | None:intergenic | 30.0% | |
| ! | TGTACAATGGTGTAGATTTT+TGG | + | chr5_4:25253626-25253645 | Msa0845850:intron | 30.0% |
| ! | GATTTCTACTTTGGAAAAGA+CGG | - | chr5_4:25253689-25253708 | None:intergenic | 30.0% |
| CATTCAGATGATTTCTACTT+TGG | - | chr5_4:25253698-25253717 | None:intergenic | 30.0% | |
| CTTCATGGATTCTAAACAAT+TGG | - | chr5_4:25253833-25253852 | None:intergenic | 30.0% | |
| ! | TTTTCCTTGAATTATCATCC+AGG | + | chr5_4:25253862-25253881 | Msa0845850:intron | 30.0% |
| TAAACCTGGATGATAATTCA+AGG | - | chr5_4:25253869-25253888 | None:intergenic | 30.0% | |
| ACTTTCTTAAGTCATAGTTG+AGG | - | chr5_4:25253893-25253912 | None:intergenic | 30.0% | |
| TATCAAATTTAAGGACAGAG+GGG | - | chr5_4:25254003-25254022 | None:intergenic | 30.0% | |
| !!! | CTAACGTTTTTTAGTGTTAC+TGG | + | chr5_4:25254106-25254125 | Msa0845850:intron | 30.0% |
| ACTAAAGCTCTTTAGTAACA+TGG | + | chr5_4:25254202-25254221 | Msa0845850:intron | 30.0% | |
| CTAAAGCTCTTTAGTAACAT+GGG | + | chr5_4:25254203-25254222 | Msa0845850:intron | 30.0% | |
| CAATAGACAAAACCAAGAAA+AGG | + | chr5_4:25254505-25254524 | Msa0845850:intron | 30.0% | |
| !! | CTTGATAATGAAGAGTTACA+AGG | - | chr5_4:25254795-25254814 | None:intergenic | 30.0% |
| TGAATCATTAGTCATATCTC+TGG | - | chr5_4:25254870-25254889 | None:intergenic | 30.0% | |
| ! | GATTCAACCATAAAGCTTTT+TGG | + | chr5_4:25254884-25254903 | Msa0845850:CDS | 30.0% |
| TTTGAAGAATTCACTTCAAG+TGG | - | chr5_4:25250199-25250218 | None:intergenic | 30.0% | |
| TTTCAAGAAAGACCAATAGT+AGG | + | chr5_4:25255342-25255361 | Msa0845850:intron | 30.0% | |
| TGAAGTCTATAATCCTAAAC+TGG | + | chr5_4:25250549-25250568 | Msa0845850:intron | 30.0% | |
| ! | TAACTTTGTGGTTCATCTTT+TGG | + | chr5_4:25255543-25255562 | Msa0845850:intron | 30.0% |
| ATCAATTTCAGAAACCATCA+AGG | + | chr5_4:25255590-25255609 | Msa0845850:intron | 30.0% | |
| ! | TTCTTCATAATCAAGTACTG+AGG | - | chr5_4:25255626-25255645 | None:intergenic | 30.0% |
| GCAAAAACTGTCAAAGATAT+TGG | + | chr5_4:25255854-25255873 | Msa0845850:intron | 30.0% | |
| AGTGAAGTTGAAGACATAAT+AGG | - | chr5_4:25256009-25256028 | None:intergenic | 30.0% | |
| AAAATGAATGTTGGATCAGA+AGG | + | chr5_4:25256036-25256055 | Msa0845850:CDS | 30.0% | |
| AACCCAATATAGCATACTAT+GGG | + | chr5_4:25251233-25251252 | Msa0845850:CDS | 30.0% | |
| TTCCAAGTAAACCTACTTTA+GGG | + | chr5_4:25256217-25256236 | Msa0845850:intron | 30.0% | |
| TTAACACTTGGAATCAAAAG+TGG | + | chr5_4:25256357-25256376 | Msa0845850:CDS | 30.0% | |
| ! | TTTCAATGGATTTGCATCTA+TGG | + | chr5_4:25251480-25251499 | Msa0845850:CDS | 30.0% |
| ! | TTCAATGGATTTGCATCTAT+GGG | + | chr5_4:25251481-25251500 | Msa0845850:CDS | 30.0% |
| GTTGAATCATTAGTCATCTC+TGG | - | chr5_4:25250046-25250065 | None:intergenic | 35.0% | |
| TGTTCTCCCAAAAAGCTTAA+TGG | - | chr5_4:25250068-25250087 | None:intergenic | 35.0% | |
| GCAACTTCAACTTAACTTTG+TGG | + | chr5_4:25250586-25250605 | Msa0845850:intron | 35.0% | |
| ! | TTCATCGTAATCAAGTACTG+AGG | - | chr5_4:25250681-25250700 | None:intergenic | 35.0% |
| !!! | ATCCTCTTTGGTTTGTTTTG+AGG | - | chr5_4:25250705-25250724 | None:intergenic | 35.0% |
| !! | GAAGTTTCTGTTTCTGATGA+GGG | - | chr5_4:25250776-25250795 | None:intergenic | 35.0% |
| !! | AGAAGTTTCTGTTTCTGATG+AGG | - | chr5_4:25250777-25250796 | None:intergenic | 35.0% |
| ! | GGACATGGAACAATTTTGTT+AGG | - | chr5_4:25250854-25250873 | None:intergenic | 35.0% |
| TTGACGATTATGTGAGACAT+CGG | - | chr5_4:25251044-25251063 | None:intergenic | 35.0% | |
| AATAGGAGAATCTGATCCAA+AGG | - | chr5_4:25251083-25251102 | None:intergenic | 35.0% | |
| ! | TTTTTCCACAACAGTTTCCA+TGG | + | chr5_4:25251179-25251198 | Msa0845850:CDS | 35.0% |
| ACACAGGATAACACATTGTT+GGG | - | chr5_4:25251207-25251226 | None:intergenic | 35.0% | |
| CATAGTATGCTATATTGGGT+TGG | - | chr5_4:25251234-25251253 | None:intergenic | 35.0% | |
| CAACCCAATATAGCATACTA+TGG | + | chr5_4:25251232-25251251 | Msa0845850:CDS | 35.0% | |
| CCACCATAGTATGCTATATT+GGG | - | chr5_4:25251238-25251257 | None:intergenic | 35.0% | |
| ACCACCATAGTATGCTATAT+TGG | - | chr5_4:25251239-25251258 | None:intergenic | 35.0% | |
| TTAGGGAAACATTCAAGAGA+TGG | + | chr5_4:25251325-25251344 | Msa0845850:intron | 35.0% | |
| AACCCTTTGCATCTTCATTA+GGG | - | chr5_4:25251420-25251439 | None:intergenic | 35.0% | |
| AAACCCTTTGCATCTTCATT+AGG | - | chr5_4:25251421-25251440 | None:intergenic | 35.0% | |
| TTAACACTAGGAAACAAGAG+TGG | + | chr5_4:25251448-25251467 | Msa0845850:CDS | 35.0% | |
| !! | ATTGGCTTTCAATACTGATG+AGG | - | chr5_4:25251536-25251555 | None:intergenic | 35.0% |
| TTCCATGAGAGGATTTGATT+GGG | + | chr5_4:25251583-25251602 | Msa0845850:intron | 35.0% | |
| ACGATGAATAGACAAAGGAA+AGG | + | chr5_4:25251848-25251867 | Msa0845850:intron | 35.0% | |
| ! | GACAAAGGAAAGGAGATTTT+TGG | + | chr5_4:25251858-25251877 | Msa0845850:intron | 35.0% |
| ACATTTATTTCAGTTGGGAG+TGG | + | chr5_4:25252037-25252056 | Msa0845850:intron | 35.0% | |
| TAGTGAAGTGATCATGCATA+TGG | - | chr5_4:25252105-25252124 | None:intergenic | 35.0% | |
| TACCACAAAGCACAAAAAGA+AGG | + | chr5_4:25252123-25252142 | Msa0845850:intron | 35.0% | |
| ACCACAAAGCACAAAAAGAA+GGG | + | chr5_4:25252124-25252143 | Msa0845850:intron | 35.0% | |
| TTGTGCTGAAGATTCTCTTT+CGG | - | chr5_4:25252304-25252323 | None:intergenic | 35.0% | |
| TGCTAGGAAATTGAAGTGAA+TGG | - | chr5_4:25252437-25252456 | None:intergenic | 35.0% | |
| TCATGATCTGGTGTAATCTT+TGG | + | chr5_4:25252489-25252508 | Msa0845850:intron | 35.0% | |
| CATCTGAATTTGACTGGATA+TGG | + | chr5_4:25252526-25252545 | Msa0845850:intron | 35.0% | |
| ATGTTCACAATCAGGCTATT+AGG | + | chr5_4:25252639-25252658 | Msa0845850:intron | 35.0% | |
| AAACAATGTTCAGGATCCAA+AGG | - | chr5_4:25252667-25252686 | None:intergenic | 35.0% | |
| TGAGACTACAAACAATGTTC+AGG | - | chr5_4:25252676-25252695 | None:intergenic | 35.0% | |
| ! | AAGATAGAATTCTGGTTGGA+AGG | - | chr5_4:25252766-25252785 | None:intergenic | 35.0% |
| CCAACCAGAATTCTATCTTA+CGG | + | chr5_4:25252767-25252786 | Msa0845850:intron | 35.0% | |
| CAACCAGAATTCTATCTTAC+GGG | + | chr5_4:25252768-25252787 | Msa0845850:intron | 35.0% | |
| AACCAGAATTCTATCTTACG+GGG | + | chr5_4:25252769-25252788 | Msa0845850:intron | 35.0% | |
| ! | TTCTAATTTGCATTGGTCTC+TGG | + | chr5_4:25253001-25253020 | Msa0845850:intron | 35.0% |
| TGTTACCCACAATAGCAAAA+AGG | + | chr5_4:25253025-25253044 | Msa0845850:intron | 35.0% | |
| TTTAGGCCTCCAAATTTCAA+TGG | + | chr5_4:25253050-25253069 | Msa0845850:intron | 35.0% | |
| GTACTTTGCGTTTATTCTCA+TGG | - | chr5_4:25253114-25253133 | None:intergenic | 35.0% | |
| ATTCAAAGAATCCTTTGGCA+AGG | + | chr5_4:25253200-25253219 | Msa0845850:intron | 35.0% | |
| GTCACAACCTATTGCAAATT+TGG | - | chr5_4:25253255-25253274 | None:intergenic | 35.0% | |
| GTGAATGGTAAACGATTTGT+TGG | - | chr5_4:25253309-25253328 | None:intergenic | 35.0% | |
| CAAATCGTTTACCATTCACA+CGG | + | chr5_4:25253310-25253329 | Msa0845850:intron | 35.0% | |
| AAATCGTTTACCATTCACAC+GGG | + | chr5_4:25253311-25253330 | Msa0845850:intron | 35.0% | |
| TATTCAGCCCTTAAGATACA+GGG | - | chr5_4:25253373-25253392 | None:intergenic | 35.0% | |
| ATATTCAGCCCTTAAGATAC+AGG | - | chr5_4:25253374-25253393 | None:intergenic | 35.0% | |
| ! | GGTACCCTATCTAAAATTGT+CGG | + | chr5_4:25253398-25253417 | Msa0845850:intron | 35.0% |
| !! | CGGATAATTGATTTGCAAAC+GGG | + | chr5_4:25253418-25253437 | Msa0845850:intron | 35.0% |
| ! | AAAATATAGTTTTCCCGGCA+TGG | - | chr5_4:25253487-25253506 | None:intergenic | 35.0% |
| ! | CATGTCCTACAACCTTTTTA+TGG | + | chr5_4:25253570-25253589 | Msa0845850:intron | 35.0% |
| !!! | CTGTTTTTTGTCCAATGCAA+AGG | + | chr5_4:25253599-25253618 | Msa0845850:intron | 35.0% |
| !! | GATTTTTGGAAGAGATTGTG+TGG | + | chr5_4:25253640-25253659 | Msa0845850:intron | 35.0% |
| GGAAAACAATTTGCACTTCA+TGG | - | chr5_4:25253848-25253867 | None:intergenic | 35.0% | |
| TCTCATCAAAGTGAGTAGAA+GGG | - | chr5_4:25253927-25253946 | None:intergenic | 35.0% | |
| ATCTCATCAAAGTGAGTAGA+AGG | - | chr5_4:25253928-25253947 | None:intergenic | 35.0% | |
| !! | GACTGAAAAATTCTGAAGTG+AGG | - | chr5_4:25254040-25254059 | None:intergenic | 35.0% |
| AGACAAAACCAAGAAAAGGA+AGG | + | chr5_4:25254509-25254528 | Msa0845850:intron | 35.0% | |
| AAAGGAAGGAACTGAGAAAA+AGG | + | chr5_4:25254523-25254542 | Msa0845850:intron | 35.0% | |
| AAGGCAAAAGTTGAAAAAGG+AGG | + | chr5_4:25254542-25254561 | Msa0845850:intron | 35.0% | |
| TTATGAGCCACAAATTGTTG+TGG | - | chr5_4:25254658-25254677 | None:intergenic | 35.0% | |
| !! | AAACTTCCACTTTTCCTATG+TGG | + | chr5_4:25254676-25254695 | Msa0845850:intron | 35.0% |
| ATTCATGTGTTCATGTGAAG+AGG | - | chr5_4:25254734-25254753 | None:intergenic | 35.0% | |
| ! | GGTGTTGTGTGTTTGAAAAA+TGG | - | chr5_4:25254915-25254934 | None:intergenic | 35.0% |
| AAACTCAGAGGAACAATCAT+CGG | - | chr5_4:25250110-25250129 | None:intergenic | 35.0% | |
| GTTGCAAATCAAACCAGTTT+AGG | - | chr5_4:25255410-25255429 | None:intergenic | 35.0% | |
| !! | TCATAATCAAGTACTGAGGT+AGG | - | chr5_4:25255622-25255641 | None:intergenic | 35.0% |
| !! | AGAAGTTTCTGTTTCTGATG+TGG | - | chr5_4:25250777-25250796 | None:intergenic | 35.0% |
| ACTTTGTTCATCAACTTTCG+TGG | - | chr5_4:25255719-25255738 | None:intergenic | 35.0% | |
| TGAACAAAGTGATATTTCCC+AGG | + | chr5_4:25255729-25255748 | Msa0845850:CDS | 35.0% | |
| ! | GGACATGGAAGAATTTTGTT+TGG | - | chr5_4:25255763-25255782 | None:intergenic | 35.0% |
| ACTCATTTGACGATTATGTG+AGG | - | chr5_4:25251050-25251069 | None:intergenic | 35.0% | |
| ! | ATGAGTACTGTCTTGAACTT+TGG | + | chr5_4:25255973-25255992 | Msa0845850:CDS | 35.0% |
| CTCGACAAGAAAATGAATGT+TGG | + | chr5_4:25256027-25256046 | Msa0845850:CDS | 35.0% | |
| ! | TTTTTCCACAACAGTTTCCA+TGG | + | chr5_4:25251179-25251198 | Msa0845850:CDS | 35.0% |
| AAACAGGATAACACATTGCT+GGG | - | chr5_4:25256116-25256135 | None:intergenic | 35.0% | |
| !! | ATATTGGGTTGGAATGAAAC+AGG | - | chr5_4:25256132-25256151 | None:intergenic | 35.0% |
| CATAGTATGCTATATTGGGT+TGG | - | chr5_4:25251234-25251253 | None:intergenic | 35.0% | |
| CAACCCAATATAGCATACTA+TGG | + | chr5_4:25251232-25251251 | Msa0845850:CDS | 35.0% | |
| ACCCAATATAGCATACTATG+GGG | + | chr5_4:25251234-25251253 | Msa0845850:CDS | 35.0% | |
| GTTCCAAGTAAACCTACTTT+AGG | + | chr5_4:25256216-25256235 | Msa0845850:intron | 35.0% | |
| TTCCCTAAAGTAGGTTTACT+TGG | - | chr5_4:25256222-25256241 | None:intergenic | 35.0% | |
| CTTGAATGTTTCCCTAAAGT+AGG | - | chr5_4:25256231-25256250 | None:intergenic | 35.0% | |
| TTAGGGAAACATTCAAGAGA+TGG | + | chr5_4:25251325-25251344 | Msa0845850:intron | 35.0% | |
| ! | GGTTCTAATTGGTTAACACT+TGG | + | chr5_4:25256345-25256364 | Msa0845850:CDS | 35.0% |
| AAATCTTCATGAGCAAGAGG+AGG | - | chr5_4:25250136-25250155 | None:intergenic | 40.0% | |
| GAGAAATCTTCATGAGCAAG+AGG | - | chr5_4:25250139-25250158 | None:intergenic | 40.0% | |
| !! | TCGTAATCAAGTACTGAGGT+GGG | - | chr5_4:25250677-25250696 | None:intergenic | 40.0% |
| !! | ATCGTAATCAAGTACTGAGG+TGG | - | chr5_4:25250678-25250697 | None:intergenic | 40.0% |
| AGCCTCAAAACAAACCAAAG+AGG | + | chr5_4:25250700-25250719 | Msa0845850:CDS | 40.0% | |
| !! | GGGAGTGTTTAAATCCTCTT+TGG | - | chr5_4:25250717-25250736 | None:intergenic | 40.0% |
| ATAAGGCTTGAAGATGTGGT+GGG | - | chr5_4:25250737-25250756 | None:intergenic | 40.0% | |
| AATAAGGCTTGAAGATGTGG+TGG | - | chr5_4:25250738-25250757 | None:intergenic | 40.0% | |
| CTCAATAAGGCTTGAAGATG+TGG | - | chr5_4:25250741-25250760 | None:intergenic | 40.0% | |
| !!! | GTGTTTTCGGGTTCTCAATA+AGG | - | chr5_4:25250754-25250773 | None:intergenic | 40.0% |
| !!! | TTTCTGATGAGGGTGTTTTC+GGG | - | chr5_4:25250766-25250785 | None:intergenic | 40.0% |
| !!! | GTTTCTGATGAGGGTGTTTT+CGG | - | chr5_4:25250767-25250786 | None:intergenic | 40.0% |
| TGAACAAAGTGATATGTCCC+AGG | + | chr5_4:25250820-25250839 | Msa0845850:CDS | 40.0% | |
| ! | TTTGTTAGGAGCTTTGTCCT+GGG | - | chr5_4:25250840-25250859 | None:intergenic | 40.0% |
| !! | TTTTGTTAGGAGCTTTGTCC+TGG | - | chr5_4:25250841-25250860 | None:intergenic | 40.0% |
| ATGAGTAGTGTCTTGACCTT+TGG | + | chr5_4:25251064-25251083 | Msa0845850:intron | 40.0% | |
| TAACACATTGTTGGGTTCCA+TGG | - | chr5_4:25251199-25251218 | None:intergenic | 40.0% | |
| GACACAGGATAACACATTGT+TGG | - | chr5_4:25251208-25251227 | None:intergenic | 40.0% | |
| !! | ATATTGGGTTGGAATGACAC+AGG | - | chr5_4:25251223-25251242 | None:intergenic | 40.0% |
| CCCAATATAGCATACTATGG+TGG | + | chr5_4:25251235-25251254 | Msa0845850:CDS | 40.0% | |
| ! | ACACAAGATTGAGTTGCGAT+AGG | - | chr5_4:25251289-25251308 | None:intergenic | 40.0% |
| AGACCCTAATGAAGATGCAA+AGG | + | chr5_4:25251414-25251433 | Msa0845850:CDS | 40.0% | |
| GACCCTAATGAAGATGCAAA+GGG | + | chr5_4:25251415-25251434 | Msa0845850:CDS | 40.0% | |
| ! | AATGGATTTGCATCTATGGG+TGG | + | chr5_4:25251484-25251503 | Msa0845850:CDS | 40.0% |
| GTTCCATGAGAGGATTTGAT+TGG | + | chr5_4:25251582-25251601 | Msa0845850:intron | 40.0% | |
| TTCCCAATCAAATCCTCTCA+TGG | - | chr5_4:25251588-25251607 | None:intergenic | 40.0% | |
| AGTTACCATTGACACAGACA+CGG | - | chr5_4:25251652-25251671 | None:intergenic | 40.0% | |
| ATTTCAGTTGGGAGTGGTAA+AGG | + | chr5_4:25252043-25252062 | Msa0845850:intron | 40.0% | |
| CCACAAAGCACAAAAAGAAG+GGG | + | chr5_4:25252125-25252144 | Msa0845850:intron | 40.0% | |
| ATTCTCTTTCGGAATGCTAG+GGG | - | chr5_4:25252293-25252312 | None:intergenic | 40.0% | |
| GATTCTCTTTCGGAATGCTA+GGG | - | chr5_4:25252294-25252313 | None:intergenic | 40.0% | |
| AGATTCTCTTTCGGAATGCT+AGG | - | chr5_4:25252295-25252314 | None:intergenic | 40.0% | |
| GAAAGAGAATCTTCAGCACA+AGG | + | chr5_4:25252303-25252322 | Msa0845850:intron | 40.0% | |
| CATTACAGAACCCGTAACAA+GGG | - | chr5_4:25252343-25252362 | None:intergenic | 40.0% | |
| ACACAGTAAGTGGCATGTAA+AGG | - | chr5_4:25252374-25252393 | None:intergenic | 40.0% | |
| GCACATCATCTGAATTTGAC+TGG | + | chr5_4:25252520-25252539 | Msa0845850:intron | 40.0% | |
| TTTGACTGGATATGGCTTCT+AGG | + | chr5_4:25252534-25252553 | Msa0845850:intron | 40.0% | |
| TTGGAAGGACAATTGTGAAC+AGG | - | chr5_4:25252751-25252770 | None:intergenic | 40.0% | |
| CCGTAAGATAGAATTCTGGT+TGG | - | chr5_4:25252770-25252789 | None:intergenic | 40.0% | |
| CCAAGGCTCAAGAGATAAAA+AGG | - | chr5_4:25252828-25252847 | None:intergenic | 40.0% | |
| ! | CCTTTTTATCTCTTGAGCCT+TGG | + | chr5_4:25252825-25252844 | Msa0845850:intron | 40.0% |
| !! | ATCTCTTGAGCCTTGGTTTT+AGG | + | chr5_4:25252832-25252851 | Msa0845850:intron | 40.0% |
| AACTGGCCATTGAAATTTGG+AGG | - | chr5_4:25253059-25253078 | None:intergenic | 40.0% | |
| GCAAACTGGCCATTGAAATT+TGG | - | chr5_4:25253062-25253081 | None:intergenic | 40.0% | |
| ! | GAGAATAAACGCAAAGTACC+TGG | + | chr5_4:25253115-25253134 | Msa0845850:intron | 40.0% |
| TGACACAAGTCAACAAGCTA+AGG | + | chr5_4:25253271-25253290 | Msa0845850:intron | 40.0% | |
| GACACAAGTCAACAAGCTAA+GGG | + | chr5_4:25253272-25253291 | Msa0845850:intron | 40.0% | |
| AATTTCAGCAATTGCCATGC+CGG | + | chr5_4:25253470-25253489 | Msa0845850:intron | 40.0% | |
| TTGTACACAGACCTTTGCAT+TGG | - | chr5_4:25253613-25253632 | None:intergenic | 40.0% | |
| ATGCAAAGGTCTGTGTACAA+TGG | + | chr5_4:25253613-25253632 | Msa0845850:intron | 40.0% | |
| TGTGTGGTGTTTCCATTATC+AGG | + | chr5_4:25253656-25253675 | Msa0845850:intron | 40.0% | |
| GTCATAGTTGAGGATAAACC+TGG | - | chr5_4:25253883-25253902 | None:intergenic | 40.0% | |
| GCAATGTGATGTGCAATAAG+TGG | - | chr5_4:25254338-25254357 | None:intergenic | 40.0% | |
| ! | TCTCAGTTCCTTCCTTTTCT+TGG | - | chr5_4:25254520-25254539 | None:intergenic | 40.0% |
| AGTTGAAAAAGGAGGTGACA+TGG | + | chr5_4:25254550-25254569 | Msa0845850:intron | 40.0% | |
| GAGGTGACATGGATGAAAAA+GGG | + | chr5_4:25254561-25254580 | Msa0845850:intron | 40.0% | |
| TGACATGGATGAAAAAGGGT+AGG | + | chr5_4:25254565-25254584 | Msa0845850:intron | 40.0% | |
| GTAATGCCACATAGGAAAAG+TGG | - | chr5_4:25254685-25254704 | None:intergenic | 40.0% | |
| GTTGGAAAGTAATGCCACAT+AGG | - | chr5_4:25254693-25254712 | None:intergenic | 40.0% | |
| GTAAAGGAGAGAAAGAGAGA+AGG | - | chr5_4:25254767-25254786 | None:intergenic | 40.0% | |
| GAGTTACAAGGGAGAAGTAA+AGG | - | chr5_4:25254783-25254802 | None:intergenic | 40.0% | |
| GGTTCTCCCAAAAAGCTTTA+TGG | - | chr5_4:25254894-25254913 | None:intergenic | 40.0% | |
| AAATCTTCATGAGCAAGAGG+AGG | - | chr5_4:25250136-25250155 | None:intergenic | 40.0% | |
| GAGAAATCTTCATGAGCAAG+AGG | - | chr5_4:25250139-25250158 | None:intergenic | 40.0% | |
| GTTAGGTGTATGCAATCTTG+TGG | + | chr5_4:25255108-25255127 | Msa0845850:intron | 40.0% | |
| ! | AATATGAGCTGGCCTACTAT+TGG | - | chr5_4:25255357-25255376 | None:intergenic | 40.0% |
| !! | GTTTCTGTTTCTGATGTGGT+GGG | - | chr5_4:25255682-25255701 | None:intergenic | 40.0% |
| !! | AGTTTCTGTTTCTGATGTGG+TGG | - | chr5_4:25255683-25255702 | None:intergenic | 40.0% |
| ! | TTTGTTTGGAGCTTTGTCCT+GGG | - | chr5_4:25255749-25255768 | None:intergenic | 40.0% |
| !! | TTTTGTTTGGAGCTTTGTCC+TGG | - | chr5_4:25255750-25255769 | None:intergenic | 40.0% |
| ! | ATGCTTTTGCATCTTGGACA+TGG | - | chr5_4:25255778-25255797 | None:intergenic | 40.0% |
| ! | GTGTCTATGCTTTTGCATCT+TGG | - | chr5_4:25255784-25255803 | None:intergenic | 40.0% |
| ! | ACAGTTTTTGCAGAAGTGAC+GGG | - | chr5_4:25255845-25255864 | None:intergenic | 40.0% |
| ! | GACAGTTTTTGCAGAAGTGA+CGG | - | chr5_4:25255846-25255865 | None:intergenic | 40.0% |
| TGTCAAAGATATTGGACTGC+CGG | + | chr5_4:25255862-25255881 | Msa0845850:intron | 40.0% | |
| TTGACGATTATGTGAGGCAT+CGG | - | chr5_4:25255953-25255972 | None:intergenic | 40.0% | |
| GAAACAGGATAACACATTGC+TGG | - | chr5_4:25256117-25256136 | None:intergenic | 40.0% | |
| CCCCCATAGTATGCTATATT+GGG | - | chr5_4:25256147-25256166 | None:intergenic | 40.0% | |
| CCCAATATAGCATACTATGG+GGG | + | chr5_4:25251235-25251254 | Msa0845850:CDS | 40.0% | |
| ACCCCCATAGTATGCTATAT+TGG | - | chr5_4:25256148-25256167 | None:intergenic | 40.0% | |
| ! | ACACAAGATTGAGTTGCGAT+AGG | - | chr5_4:25251289-25251308 | None:intergenic | 40.0% |
| AACCCTTTGCAGCTTCATTA+GGG | - | chr5_4:25256329-25256348 | None:intergenic | 40.0% | |
| ! | AAGCTGCAAAGGGTTCTAAT+TGG | + | chr5_4:25256334-25256353 | Msa0845850:CDS | 40.0% |
| ACACTTGGAATCAAAAGTGG+TGG | + | chr5_4:25256360-25256379 | Msa0845850:CDS | 40.0% | |
| !! | AGTGGTGGAGCATTTTTCAA+TGG | + | chr5_4:25256375-25256394 | Msa0845850:CDS | 40.0% |
| ! | AATGGATTTGCATCTATGGG+TGG | + | chr5_4:25251484-25251503 | Msa0845850:CDS | 40.0% |
| AAGAGGAGGAGAAAACTCAG+AGG | - | chr5_4:25250122-25250141 | None:intergenic | 45.0% | |
| ! | ACGCTTTTGCATCTTGGACA+TGG | - | chr5_4:25250869-25250888 | None:intergenic | 45.0% |
| ! | GTGTCTACGCTTTTGCATCT+TGG | - | chr5_4:25250875-25250894 | None:intergenic | 45.0% |
| GCAAAAGCTGCCAGAGATAT+TGG | + | chr5_4:25250945-25250964 | Msa0845850:CDS | 45.0% | |
| TGCCAGAGATATTGGACTTC+CGG | + | chr5_4:25250953-25250972 | Msa0845850:CDS | 45.0% | |
| ! | ACCACGAGAAGTATGCTTGT+AGG | + | chr5_4:25250980-25250999 | Msa0845850:intron | 45.0% |
| ACCTACAAGCATACTTCTCG+TGG | - | chr5_4:25250984-25251003 | None:intergenic | 45.0% | |
| ! | AGAAGTATGCTTGTAGGTGC+AGG | + | chr5_4:25250986-25251005 | Msa0845850:intron | 45.0% |
| GTGGTTGTTTAGTCCCATCA+TGG | + | chr5_4:25251254-25251273 | Msa0845850:CDS | 45.0% | |
| TAGGTTGTACGCTCCATGAT+GGG | - | chr5_4:25251270-25251289 | None:intergenic | 45.0% | |
| ATAGGTTGTACGCTCCATGA+TGG | - | chr5_4:25251271-25251290 | None:intergenic | 45.0% | |
| ACACTAGGAAACAAGAGTGG+TGG | + | chr5_4:25251451-25251470 | Msa0845850:CDS | 45.0% | |
| !! | AGTGGTGGAGGACTTTTCAA+TGG | + | chr5_4:25251466-25251485 | Msa0845850:CDS | 45.0% |
| TTGCATCTATGGGTGGTGAT+AGG | + | chr5_4:25251491-25251510 | Msa0845850:CDS | 45.0% | |
| CCTTGATAAAGCTGCAGGAT+TGG | - | chr5_4:25251554-25251573 | None:intergenic | 45.0% | |
| ! | CCAATCCTGCAGCTTTATCA+AGG | + | chr5_4:25251551-25251570 | Msa0845850:CDS | 45.0% |
| TGAGACCTTGATAAAGCTGC+AGG | - | chr5_4:25251559-25251578 | None:intergenic | 45.0% | |
| AGTTGGGAGTGGTAAAGGAA+GGG | + | chr5_4:25252048-25252067 | Msa0845850:intron | 45.0% | |
| ! | CCCCTTCTTTTTGTGCTTTG+TGG | - | chr5_4:25252128-25252147 | None:intergenic | 45.0% |
| TTCTCTTTCGGAATGCTAGG+GGG | - | chr5_4:25252292-25252311 | None:intergenic | 45.0% | |
| AGAGAATCTTCAGCACAAGG+AGG | + | chr5_4:25252306-25252325 | Msa0845850:intron | 45.0% | |
| TGGATGATCCACCCTTGTTA+CGG | + | chr5_4:25252329-25252348 | Msa0845850:intron | 45.0% | |
| GCATTACAGAACCCGTAACA+AGG | - | chr5_4:25252344-25252363 | None:intergenic | 45.0% | |
| TTGAGGAATGTCGTCACTCA+AGG | - | chr5_4:25252598-25252617 | None:intergenic | 45.0% | |
| ATCAGGCTATTAGGCTCCTT+TGG | + | chr5_4:25252648-25252667 | Msa0845850:intron | 45.0% | |
| !! | TGGTTGTTGGTGATAAGTCC+CGG | - | chr5_4:25252713-25252732 | None:intergenic | 45.0% |
| GACTTATCACCAACAACCAG+AGG | + | chr5_4:25252714-25252733 | Msa0845850:intron | 45.0% | |
| AGCAGTAAACCTCTGGTTGT+TGG | - | chr5_4:25252726-25252745 | None:intergenic | 45.0% | |
| ACAGGTTAGCAGTAAACCTC+TGG | - | chr5_4:25252733-25252752 | None:intergenic | 45.0% | |
| GTCCCCGTAAGATAGAATTC+TGG | - | chr5_4:25252774-25252793 | None:intergenic | 45.0% | |
| ! | TAGCCACTTCGCTTGCATTT+TGG | - | chr5_4:25252967-25252986 | None:intergenic | 45.0% |
| GATTCTTGGTCGTTGAATCC+AGG | - | chr5_4:25253136-25253155 | None:intergenic | 45.0% | |
| GTGTGAGCACAGTAGATTCT+TGG | - | chr5_4:25253150-25253169 | None:intergenic | 45.0% | |
| ATTTCAGCAATTGCCATGCC+GGG | + | chr5_4:25253471-25253490 | Msa0845850:intron | 45.0% | |
| GTGGTGTTTCCATTATCAGG+AGG | + | chr5_4:25253659-25253678 | Msa0845850:intron | 45.0% | |
| GACGGAATACCTCCTGATAA+TGG | - | chr5_4:25253671-25253690 | None:intergenic | 45.0% | |
| GGAGGTGACATGGATGAAAA+AGG | + | chr5_4:25254560-25254579 | Msa0845850:intron | 45.0% | |
| TGAGATCTTAGTGCCTAGCT+GGG | - | chr5_4:25254632-25254651 | None:intergenic | 45.0% | |
| CTCACAGCCACAACAATTTG+TGG | + | chr5_4:25254648-25254667 | Msa0845850:intron | 45.0% | |
| AAGGAGAGAAAGAGAGAAGG+AGG | - | chr5_4:25254764-25254783 | None:intergenic | 45.0% | |
| AAGAGGAGGAGAAAACTCAG+AGG | - | chr5_4:25250122-25250141 | None:intergenic | 45.0% | |
| GAGGTAGGTTCTTTCCTTGA+TGG | - | chr5_4:25255607-25255626 | None:intergenic | 45.0% | |
| GTGTTGAAATCCTCTGTGGT+GGG | - | chr5_4:25255658-25255677 | None:intergenic | 45.0% | |
| ! | AGTGTTGAAATCCTCTGTGG+TGG | - | chr5_4:25255659-25255678 | None:intergenic | 45.0% |
| ! | CAGTTTTTGCAGAAGTGACG+GGG | - | chr5_4:25255844-25255863 | None:intergenic | 45.0% |
| ! | ACCACGAGAAGTATGCTTGT+AGG | + | chr5_4:25250980-25250999 | Msa0845850:intron | 45.0% |
| GGATCAGAAGGTGAAACATC+TGG | + | chr5_4:25256048-25256067 | Msa0845850:CDS | 45.0% | |
| TAACACATTGCTGGGTTCCA+TGG | - | chr5_4:25256108-25256127 | None:intergenic | 45.0% | |
| AGCATACTATGGGGGTTGTT+TGG | + | chr5_4:25256152-25256171 | Msa0845850:intron | 45.0% | |
| TAGGTTGTACGCTCCATGAT+GGG | - | chr5_4:25251270-25251289 | None:intergenic | 45.0% | |
| ATAGGTTGTACGCTCCATGA+TGG | - | chr5_4:25251271-25251290 | None:intergenic | 45.0% | |
| AGACCCTAATGAAGCTGCAA+AGG | + | chr5_4:25256323-25256342 | Msa0845850:CDS | 45.0% | |
| GACCCTAATGAAGCTGCAAA+GGG | + | chr5_4:25256324-25256343 | Msa0845850:CDS | 45.0% | |
| GAACCCTTTGCAGCTTCATT+AGG | - | chr5_4:25256330-25256349 | None:intergenic | 45.0% | |
| GGGTGGTGATAAGAATCATG+TGG | + | chr5_4:25256410-25256429 | Msa0845850:CDS | 45.0% | |
| ! | CAGCTTTTGCAGAAGTGACG+GGG | - | chr5_4:25250935-25250954 | None:intergenic | 50.0% |
| ! | GCAGCTTTTGCAGAAGTGAC+GGG | - | chr5_4:25250936-25250955 | None:intergenic | 50.0% |
| ! | GGCAGCTTTTGCAGAAGTGA+CGG | - | chr5_4:25250937-25250956 | None:intergenic | 50.0% |
| CTCCGGAAGTCCAATATCTC+TGG | - | chr5_4:25250958-25250977 | None:intergenic | 50.0% | |
| CAGAGATATTGGACTTCCGG+AGG | + | chr5_4:25250956-25250975 | Msa0845850:CDS | 50.0% | |
| CATACTTCTCGTGGTTCCTC+CGG | - | chr5_4:25250975-25250994 | None:intergenic | 50.0% | |
| GGGTTCCATGGAAACTGTTG+TGG | - | chr5_4:25251187-25251206 | None:intergenic | 50.0% | |
| CTAGGAAACAAGAGTGGTGG+AGG | + | chr5_4:25251454-25251473 | Msa0845850:CDS | 50.0% | |
| GGGTGGTGATAGGAATCATG+TGG | + | chr5_4:25251501-25251520 | Msa0845850:CDS | 50.0% | |
| GGTCTCATGTGTTCCATGAG+AGG | + | chr5_4:25251572-25251591 | Msa0845850:intron | 50.0% | |
| CGACACTGACACATGTCAGT+AGG | - | chr5_4:25251626-25251645 | None:intergenic | 50.0% | |
| CAGTTGGGAGTGGTAAAGGA+AGG | + | chr5_4:25252047-25252066 | Msa0845850:intron | 50.0% | |
| ! | GGATTGGCAACATTGACGCA+AGG | - | chr5_4:25252271-25252290 | None:intergenic | 50.0% |
| TTTCGGAATGCTAGGGGGAT+TGG | - | chr5_4:25252287-25252306 | None:intergenic | 50.0% | |
| GAATCTTCAGCACAAGGAGG+TGG | + | chr5_4:25252309-25252328 | Msa0845850:intron | 50.0% | |
| GGATGATCCACCCTTGTTAC+GGG | + | chr5_4:25252330-25252349 | Msa0845850:intron | 50.0% | |
| TACAGAACCCGTAACAAGGG+TGG | - | chr5_4:25252340-25252359 | None:intergenic | 50.0% | |
| TCTCAGCAACAGAGTCATCC+CGG | + | chr5_4:25252691-25252710 | Msa0845850:intron | 50.0% | |
| !! | GGTTGTTGGTGATAAGTCCC+GGG | - | chr5_4:25252712-25252731 | None:intergenic | 50.0% |
| ! | CCACTTCGCTTGCATTTTGG+TGG | - | chr5_4:25252964-25252983 | None:intergenic | 50.0% |
| CCACCAAAATGCAAGCGAAG+TGG | + | chr5_4:25252961-25252980 | Msa0845850:intron | 50.0% | |
| CACACTGAGCATGTCTTCCA+AGG | + | chr5_4:25253165-25253184 | Msa0845850:intron | 50.0% | |
| !! | TTACCATTCACACGGGCTAG+AGG | + | chr5_4:25253318-25253337 | Msa0845850:intron | 50.0% |
| TTATGTGGGTGAACCCAGCT+AGG | + | chr5_4:25254616-25254635 | Msa0845850:intron | 50.0% | |
| GTGAGATCTTAGTGCCTAGC+TGG | - | chr5_4:25254633-25254652 | None:intergenic | 50.0% | |
| !!! | ATCCTCTGTGGTGGGTTTTG+AGG | - | chr5_4:25255650-25255669 | None:intergenic | 50.0% |
| !! | GGGAGTGTTGAAATCCTCTG+TGG | - | chr5_4:25255662-25255681 | None:intergenic | 50.0% |
| CAAAGATATTGGACTGCCGG+AGG | + | chr5_4:25255865-25255884 | Msa0845850:intron | 50.0% | |
| CATACTTCTCGTGGTTCCTC+CGG | - | chr5_4:25250975-25250994 | None:intergenic | 50.0% | |
| GCCTACAAGCATACTTCTCG+TGG | - | chr5_4:25255893-25255912 | None:intergenic | 50.0% | |
| ! | AGAAGTATGCTTGTAGGCGC+AGG | + | chr5_4:25255895-25255914 | Msa0845850:intron | 50.0% |
| GGGTTCCATGGAAACTGTTG+TGG | - | chr5_4:25251187-25251206 | None:intergenic | 50.0% | |
| !! | TTTTGCAGAAGTGACGGGGC+TGG | - | chr5_4:25250931-25250950 | None:intergenic | 55.0% |
| CGTGTCCGTGTCTGTGTCAA+TGG | + | chr5_4:25251644-25251663 | Msa0845850:intron | 55.0% | |
| CTCAGCAACAGAGTCATCCC+GGG | + | chr5_4:25252692-25252711 | Msa0845850:intron | 55.0% | |
| AGCCTCAAAACCCACCACAG+AGG | + | chr5_4:25255645-25255664 | Msa0845850:CDS | 55.0% | |
| !! | TTTTGCAGAAGTGACGGGGC+TGG | - | chr5_4:25250931-25250950 | None:intergenic | 55.0% |
| GGGGTTGTTTGGTCCCATCA+TGG | + | chr5_4:25256163-25256182 | Msa0845850:intron | 55.0% | |
| CGACCTCTAGCCCGTGTGAA+TGG | - | chr5_4:25253324-25253343 | None:intergenic | 60.0% | |
| ! | GCAGAAGTGACGGGGCTGGT+TGG | - | chr5_4:25250927-25250946 | None:intergenic | 65.0% |
| ! | GCAGAAGTGACGGGGCTGGT+TGG | - | chr5_4:25250927-25250946 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 25249997 | 25256446 | 25249997 | ID=Msa0845850;Name=Msa0845850 |
| chr5_4 | mRNA | 25249997 | 25256446 | 25249997 | ID=Msa0845850-mRNA-1;Parent=Msa0845850;Name=Msa0845850-mRNA-1;_AED=0.15;_eAED=0.19;_QI=52|0.25|0|1|0.25|0.11|9|0|635 |
| chr5_4 | exon | 25249997 | 25250243 | 25249997 | ID=Msa0845850-mRNA-1:exon:10054;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25250656 | 25250886 | 25250656 | ID=Msa0845850-mRNA-1:exon:10055;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25250891 | 25250997 | 25250891 | ID=Msa0845850-mRNA-1:exon:10056;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25251072 | 25251313 | 25251072 | ID=Msa0845850-mRNA-1:exon:10057;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25251329 | 25251572 | 25251329 | ID=Msa0845850-mRNA-1:exon:10058;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25254871 | 25255054 | 25254871 | ID=Msa0845850-mRNA-1:exon:10059;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25255601 | 25255844 | 25255601 | ID=Msa0845850-mRNA-1:exon:10060;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25255917 | 25256165 | 25255917 | ID=Msa0845850-mRNA-1:exon:10061;Parent=Msa0845850-mRNA-1 |
| chr5_4 | exon | 25256238 | 25256446 | 25256238 | ID=Msa0845850-mRNA-1:exon:10062;Parent=Msa0845850-mRNA-1 |
| chr5_4 | five_prime_UTR | 25249997 | 25250048 | 25249997 | ID=Msa0845850-mRNA-1:five_prime_utr;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25250049 | 25250243 | 25250049 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25250656 | 25250886 | 25250656 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25250891 | 25250997 | 25250891 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25251072 | 25251313 | 25251072 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25251329 | 25251572 | 25251329 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25254871 | 25255054 | 25254871 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25255601 | 25255844 | 25255601 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25255917 | 25256165 | 25255917 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| chr5_4 | CDS | 25256238 | 25256446 | 25256238 | ID=Msa0845850-mRNA-1:cds;Parent=Msa0845850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
