Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864460 | XP_003617863.2 | 97.698 | 391 | 3 | 1 | 1 | 391 | 1 | 385 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864460 | sp|Q9FG70|NSTU2_ARATH | 78.364 | 379 | 73 | 3 | 1 | 376 | 1 | 373 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864460 | G7KEK1 | 97.698 | 391 | 3 | 1 | 1 | 391 | 1 | 385 | 0.0 | 764 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0744160 | Msa0864460 | 0.903716 | 2.601963e-79 | -8.615850e-47 |
| Msa0779870 | Msa0864460 | 0.805018 | 1.634879e-49 | -8.615850e-47 |
| Msa0788060 | Msa0864460 | 0.840760 | 7.161730e-58 | -8.615850e-47 |
| Msa0825230 | Msa0864460 | 0.860422 | 2.088967e-63 | -8.615850e-47 |
| Msa0864460 | Msa1201470 | 0.807602 | 4.665727e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864460 | MtrunA17_Chr5g0446851 | 97.698 | 391 | 3 | 1 | 1 | 391 | 1 | 385 | 0.0 | 764 |
| Msa0864460 | MtrunA17_Chr2g0298931 | 59.737 | 380 | 143 | 4 | 3 | 379 | 1 | 373 | 4.79e-164 | 464 |
| Msa0864460 | MtrunA17_Chr2g0326791 | 28.895 | 353 | 217 | 6 | 55 | 386 | 10 | 349 | 2.59e-36 | 135 |
| Msa0864460 | MtrunA17_Chr6g0467391 | 29.677 | 310 | 201 | 4 | 55 | 360 | 10 | 306 | 5.27e-35 | 131 |
| Msa0864460 | MtrunA17_Chr6g0467371 | 29.677 | 310 | 201 | 4 | 55 | 360 | 10 | 306 | 5.27e-35 | 131 |
| Msa0864460 | MtrunA17_Chr4g0028931 | 26.724 | 348 | 220 | 4 | 55 | 377 | 10 | 347 | 1.36e-33 | 128 |
| Msa0864460 | MtrunA17_Chr3g0128961 | 25.648 | 347 | 211 | 6 | 73 | 391 | 28 | 355 | 1.44e-29 | 117 |
| Msa0864460 | MtrunA17_Chr3g0128951 | 27.476 | 313 | 202 | 5 | 73 | 379 | 28 | 321 | 2.00e-29 | 116 |
| Msa0864460 | MtrunA17_Chr3g0129401 | 29.022 | 317 | 202 | 9 | 62 | 371 | 20 | 320 | 2.07e-25 | 105 |
| Msa0864460 | MtrunA17_Chr1g0157501 | 32.308 | 325 | 201 | 7 | 59 | 375 | 15 | 328 | 8.63e-25 | 103 |
| Msa0864460 | MtrunA17_Chr5g0393381 | 32.817 | 323 | 199 | 9 | 57 | 371 | 15 | 327 | 9.28e-25 | 103 |
| Msa0864460 | MtrunA17_Chr1g0201531 | 27.508 | 309 | 199 | 6 | 46 | 344 | 4 | 297 | 1.25e-22 | 97.4 |
| Msa0864460 | MtrunA17_Chr8g0383381 | 27.246 | 334 | 214 | 7 | 62 | 381 | 20 | 338 | 8.30e-20 | 89.7 |
| Msa0864460 | MtrunA17_Chr3g0114581 | 23.148 | 324 | 224 | 6 | 68 | 379 | 27 | 337 | 1.45e-16 | 80.1 |
| Msa0864460 | MtrunA17_Chr1g0160071 | 21.818 | 330 | 233 | 6 | 68 | 389 | 26 | 338 | 4.43e-15 | 75.9 |
| Msa0864460 | MtrunA17_Chr8g0382081 | 29.758 | 289 | 180 | 9 | 68 | 344 | 24 | 301 | 8.75e-13 | 68.6 |
| Msa0864460 | MtrunA17_Chr4g0056661 | 34.266 | 143 | 89 | 4 | 68 | 207 | 65 | 205 | 7.67e-12 | 66.2 |
| Msa0864460 | MtrunA17_Chr2g0312911 | 25.309 | 324 | 205 | 14 | 69 | 372 | 24 | 330 | 2.20e-11 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0864460 | AT5G55950.1 | 78.364 | 379 | 73 | 3 | 1 | 376 | 1 | 373 | 0.0 | 598 |
| Msa0864460 | AT5G55950.2 | 84.797 | 296 | 44 | 1 | 1 | 295 | 1 | 296 | 0.0 | 514 |
| Msa0864460 | AT5G55950.4 | 77.116 | 319 | 65 | 2 | 60 | 376 | 1 | 313 | 5.98e-174 | 488 |
| Msa0864460 | AT5G55950.3 | 76.744 | 301 | 62 | 2 | 78 | 376 | 1 | 295 | 1.21e-162 | 459 |
| Msa0864460 | AT5G57100.1 | 63.478 | 345 | 117 | 2 | 7 | 348 | 12 | 350 | 9.72e-158 | 449 |
| Msa0864460 | AT5G57100.2 | 64.685 | 286 | 98 | 1 | 7 | 289 | 12 | 297 | 1.02e-134 | 387 |
| Msa0864460 | AT5G57100.3 | 63.043 | 230 | 82 | 1 | 7 | 233 | 12 | 241 | 3.64e-102 | 304 |
| Msa0864460 | AT5G57100.4 | 60.944 | 233 | 85 | 1 | 147 | 379 | 40 | 266 | 2.72e-91 | 276 |
| Msa0864460 | AT2G30460.1 | 31.563 | 339 | 186 | 9 | 73 | 380 | 28 | 351 | 3.64e-38 | 140 |
| Msa0864460 | AT2G30460.2 | 31.563 | 339 | 186 | 9 | 73 | 380 | 28 | 351 | 3.64e-38 | 140 |
| Msa0864460 | AT1G06890.4 | 31.609 | 348 | 203 | 10 | 43 | 376 | 2 | 328 | 2.38e-37 | 139 |
| Msa0864460 | AT1G06890.3 | 31.609 | 348 | 203 | 10 | 43 | 376 | 2 | 328 | 2.53e-37 | 138 |
| Msa0864460 | AT1G06890.2 | 31.609 | 348 | 203 | 10 | 43 | 376 | 2 | 328 | 3.34e-37 | 138 |
| Msa0864460 | AT1G06890.1 | 31.609 | 348 | 203 | 10 | 43 | 376 | 2 | 328 | 3.34e-37 | 138 |
| Msa0864460 | AT2G30460.3 | 31.861 | 317 | 176 | 8 | 95 | 380 | 23 | 330 | 7.44e-37 | 137 |
| Msa0864460 | AT2G30460.6 | 31.861 | 317 | 176 | 8 | 95 | 380 | 23 | 330 | 7.44e-37 | 137 |
| Msa0864460 | AT2G30460.5 | 31.861 | 317 | 176 | 8 | 95 | 380 | 23 | 330 | 7.44e-37 | 137 |
| Msa0864460 | AT2G28315.1 | 28.990 | 307 | 202 | 4 | 45 | 347 | 2 | 296 | 1.02e-31 | 123 |
| Msa0864460 | AT2G28315.2 | 29.154 | 319 | 207 | 5 | 45 | 359 | 2 | 305 | 2.55e-31 | 121 |
| Msa0864460 | AT5G42420.1 | 32.075 | 318 | 201 | 5 | 59 | 369 | 18 | 327 | 1.64e-28 | 114 |
| Msa0864460 | AT1G21070.1 | 31.195 | 343 | 214 | 9 | 57 | 388 | 16 | 347 | 9.56e-28 | 112 |
| Msa0864460 | AT4G09810.1 | 27.405 | 343 | 225 | 10 | 47 | 379 | 5 | 333 | 2.14e-27 | 111 |
| Msa0864460 | AT1G76670.2 | 30.226 | 354 | 227 | 8 | 44 | 386 | 2 | 346 | 3.55e-26 | 108 |
| Msa0864460 | AT1G76670.1 | 30.226 | 354 | 227 | 8 | 44 | 386 | 2 | 346 | 3.55e-26 | 108 |
| Msa0864460 | AT1G34020.2 | 27.744 | 328 | 213 | 9 | 62 | 379 | 20 | 333 | 2.62e-25 | 105 |
| Msa0864460 | AT1G34020.1 | 27.744 | 328 | 213 | 9 | 62 | 379 | 20 | 333 | 2.62e-25 | 105 |
| Msa0864460 | AT1G34020.3 | 27.744 | 328 | 213 | 9 | 62 | 379 | 20 | 333 | 2.62e-25 | 105 |
| Msa0864460 | AT2G30460.4 | 32.000 | 200 | 118 | 5 | 73 | 263 | 28 | 218 | 6.09e-24 | 102 |
| Msa0864460 | AT4G39390.1 | 27.826 | 345 | 228 | 7 | 41 | 379 | 4 | 333 | 1.20e-20 | 92.4 |
| Msa0864460 | AT4G39390.2 | 27.826 | 345 | 228 | 7 | 41 | 379 | 4 | 333 | 1.20e-20 | 92.4 |
| Msa0864460 | AT4G39390.3 | 27.988 | 343 | 226 | 7 | 43 | 379 | 2 | 329 | 2.32e-20 | 91.7 |
| Msa0864460 | AT4G09810.3 | 28.846 | 208 | 144 | 2 | 47 | 254 | 5 | 208 | 3.89e-19 | 86.3 |
| Msa0864460 | AT4G09810.2 | 27.037 | 270 | 177 | 8 | 120 | 379 | 17 | 276 | 1.65e-18 | 85.1 |
| Msa0864460 | AT1G77610.1 | 24.012 | 329 | 223 | 6 | 68 | 388 | 21 | 330 | 1.90e-18 | 85.9 |
| Msa0864460 | AT1G21870.1 | 23.030 | 330 | 227 | 6 | 68 | 389 | 27 | 337 | 1.57e-17 | 83.6 |
| Msa0864460 | AT1G53660.1 | 27.586 | 319 | 196 | 14 | 69 | 372 | 30 | 328 | 3.60e-12 | 67.4 |
| Msa0864460 | AT1G53660.3 | 27.586 | 319 | 196 | 14 | 69 | 372 | 48 | 346 | 3.95e-12 | 67.4 |
| Msa0864460 | AT5G25400.1 | 24.534 | 322 | 220 | 10 | 70 | 378 | 32 | 343 | 8.91e-12 | 66.2 |
| Msa0864460 | AT1G53660.4 | 27.124 | 306 | 190 | 13 | 80 | 372 | 9 | 294 | 1.54e-11 | 65.1 |
| Msa0864460 | AT1G12500.1 | 26.829 | 287 | 193 | 8 | 68 | 345 | 71 | 349 | 3.38e-11 | 64.7 |
Find 95 sgRNAs with CRISPR-Local
Find 181 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACAGAATTGCAAAGGTAAA+AGG | 0.185056 | 5_4:-64837456 | None:intergenic |
| GTGCTATAGTTGCAATTATA+TGG | 0.196565 | 5_4:+64839569 | Msa0864460:CDS |
| TGAACAAATGTGAGGAAAAT+TGG | 0.206523 | 5_4:-64838486 | None:intergenic |
| GATTTAGAGTTCAATTTATT+TGG | 0.233562 | 5_4:+64839547 | Msa0864460:CDS |
| CAATTTCTTCAAACACTATT+AGG | 0.235582 | 5_4:+64840387 | Msa0864460:three_prime_UTR |
| CAAACACTATTAGGCAATTC+AGG | 0.243025 | 5_4:+64840396 | Msa0864460:three_prime_UTR |
| ATGAATAAGCTTGGTTGTTA+TGG | 0.246697 | 5_4:+64837571 | Msa0864460:exon |
| GGTCAGGTGCCTTGGCATTA+AGG | 0.252150 | 5_4:+64839896 | Msa0864460:CDS |
| CGCATTATCCTTCAACTTCA+TGG | 0.275264 | 5_4:+64838290 | Msa0864460:CDS |
| CTAATAGTGTTTGAAGAAAT+TGG | 0.275518 | 5_4:-64840386 | None:intergenic |
| TTCTAGGAGCTTTGATGCCT+TGG | 0.276040 | 5_4:+64839782 | Msa0864460:CDS |
| ATTTGCACTTGGTGCTGTTA+TGG | 0.295321 | 5_4:+64838602 | Msa0864460:CDS |
| CACTTGTTTGTTGTATGATA+AGG | 0.334154 | 5_4:-64837197 | None:intergenic |
| TGAATAAGCTTGGTTGTTAT+GGG | 0.338495 | 5_4:+64837572 | Msa0864460:exon |
| CTTGGTTGTTATGGGATTGT+TGG | 0.362653 | 5_4:+64837580 | Msa0864460:exon |
| GACAGTGATGCAGGAGAAAC+AGG | 0.365115 | 5_4:+64837644 | Msa0864460:CDS |
| GATCATCATGGCAAACAAAT+TGG | 0.383428 | 5_4:+64838323 | Msa0864460:CDS |
| GTCCGCAATATCTTTGTTGT+TGG | 0.384372 | 5_4:-64838260 | None:intergenic |
| GAACAAATGTGAGGAAAATT+GGG | 0.386839 | 5_4:-64838485 | None:intergenic |
| AAGACCTGTGTTATTCTGTT+GGG | 0.387128 | 5_4:+64840098 | Msa0864460:CDS |
| ATATGATACTCCAAGATTGA+TGG | 0.389709 | 5_4:+64837388 | Msa0864460:five_prime_UTR |
| ATTTACAGCAGCAAGGAAAC+TGG | 0.392992 | 5_4:+64839629 | Msa0864460:CDS |
| ATAACAACCAAGCTTATTCA+TGG | 0.394404 | 5_4:-64837569 | None:intergenic |
| TGTTACTCCAACAATTGTTC+TGG | 0.395251 | 5_4:+64839300 | Msa0864460:CDS |
| ATATCTTTGTTGTTGGCGCT+TGG | 0.395651 | 5_4:-64838253 | None:intergenic |
| TTCAACTTCATGGTTGCTGT+TGG | 0.397088 | 5_4:+64838300 | Msa0864460:CDS |
| TCAACTTCATGGTTGCTGTT+GGG | 0.398882 | 5_4:+64838301 | Msa0864460:CDS |
| CTGTTATTCGACTCAGATCC+GGG | 0.403312 | 5_4:+64840128 | Msa0864460:CDS |
| GCTTGGCTCCTTCCGAGGTT+CGG | 0.411178 | 5_4:-64838236 | None:intergenic |
| CAAATACAATCCATCAATCT+TGG | 0.412314 | 5_4:-64837398 | None:intergenic |
| CCTAGAAAGAAAACTGTGAT+AGG | 0.412694 | 5_4:-64839766 | None:intergenic |
| GTCAGGTGCCTTGGCATTAA+GGG | 0.415269 | 5_4:+64839897 | Msa0864460:CDS |
| TCAGACAACAATGTTATTGT+TGG | 0.416058 | 5_4:-64840324 | None:intergenic |
| ACACCAGCCTCAAGTATAAC+AGG | 0.419149 | 5_4:+64838646 | Msa0864460:CDS |
| TAACAGCAATCTTAGCCATT+TGG | 0.422409 | 5_4:-64839282 | None:intergenic |
| AACTCTGCCAGAACAATTGT+TGG | 0.424008 | 5_4:-64839307 | None:intergenic |
| CTTACAGTGGTCAGGTGCCT+TGG | 0.424187 | 5_4:+64839888 | Msa0864460:CDS |
| TCTTTGTTGTCTTCACTAGC+TGG | 0.443142 | 5_4:-64840284 | None:intergenic |
| CAGTGTTGGTTTCTACCAAA+TGG | 0.447856 | 5_4:+64839267 | Msa0864460:intron |
| GCTTTGGCTGCTGTATCAGC+TGG | 0.447867 | 5_4:+64839502 | Msa0864460:CDS |
| TTCTCTTCTATATTTGCACT+TGG | 0.450424 | 5_4:+64838591 | Msa0864460:CDS |
| CCGGGGATTGTGAGCATTGG+CGG | 0.454725 | 5_4:+64840146 | Msa0864460:CDS |
| GCAAGGAAACTGGACAGCTT+TGG | 0.461956 | 5_4:+64839639 | Msa0864460:CDS |
| GGGATTGTTGGATTCACTGT+TGG | 0.464531 | 5_4:+64837592 | Msa0864460:CDS |
| TCTGTTATTCGACTCAGATC+CGG | 0.468414 | 5_4:+64840127 | Msa0864460:CDS |
| GGAGCGGTTGTTGCTCTCAC+TGG | 0.471179 | 5_4:+64840167 | Msa0864460:CDS |
| ACAGAATTGCAAAGGTAAAA+GGG | 0.473374 | 5_4:-64837455 | None:intergenic |
| GGATTGTTGGATTCACTGTT+GGG | 0.478433 | 5_4:+64837593 | Msa0864460:CDS |
| TAAGACCTGTGTTATTCTGT+TGG | 0.483155 | 5_4:+64840097 | Msa0864460:CDS |
| TGTTGCTCTCACTGGAATGT+CGG | 0.489922 | 5_4:+64840175 | Msa0864460:CDS |
| CCGCCAATGCTCACAATCCC+CGG | 0.490390 | 5_4:-64840146 | None:intergenic |
| AAAAGAAAAGACAGTGATGC+AGG | 0.490754 | 5_4:+64837635 | Msa0864460:CDS |
| GTGTTTGAAGAAATTGGTTG+TGG | 0.496407 | 5_4:-64840380 | None:intergenic |
| CACTTGAACGATAGGACTCC+TGG | 0.514349 | 5_4:-64839814 | None:intergenic |
| AGTGCAAATATAGAAGAGAA+TGG | 0.515498 | 5_4:-64838588 | None:intergenic |
| AACAGCAACCATGAAGTTGA+AGG | 0.516911 | 5_4:-64838298 | None:intergenic |
| AAAATAATGTCCATTCTTCA+AGG | 0.518365 | 5_4:-64837361 | None:intergenic |
| GTTGAAGGCAAACTATGCTT+CGG | 0.526876 | 5_4:-64840251 | None:intergenic |
| TTGGATTCACTGTTGGGAGA+TGG | 0.530762 | 5_4:+64837599 | Msa0864460:CDS |
| TTGGCGCTTGGCTCCTTCCG+AGG | 0.534697 | 5_4:-64838241 | None:intergenic |
| TTACATCCCACTTGAACGAT+AGG | 0.535989 | 5_4:-64839822 | None:intergenic |
| GATCCGGGGATTGTGAGCAT+TGG | 0.537864 | 5_4:+64840143 | Msa0864460:CDS |
| GGATTGTATTTGAAGCAACT+TGG | 0.539663 | 5_4:+64837409 | Msa0864460:five_prime_UTR |
| AAAATTATCAGGTAAAGCAC+TGG | 0.545102 | 5_4:+64838182 | Msa0864460:intron |
| CTTTATTGTTGATAGGTGAT+GGG | 0.545367 | 5_4:+64838444 | Msa0864460:intron |
| TGATAGGTGATGGGAAGAGT+TGG | 0.547749 | 5_4:+64838453 | Msa0864460:intron |
| TTTCTCATTGTAGATTGATG+TGG | 0.552469 | 5_4:+64839734 | Msa0864460:intron |
| ACCTGTGTTATTCTGTTGGG+AGG | 0.560653 | 5_4:+64840101 | Msa0864460:CDS |
| AATGAGCTCCGAACCTCGGA+AGG | 0.566484 | 5_4:+64838228 | Msa0864460:CDS |
| TCTAAGTCCATGAATAAGCT+TGG | 0.571479 | 5_4:+64837562 | Msa0864460:five_prime_UTR |
| TTGTTCACTACATCACTGCA+TGG | 0.573296 | 5_4:+64838502 | Msa0864460:CDS |
| AACAATAACATTGTTGTCTG+AGG | 0.579088 | 5_4:+64840326 | Msa0864460:CDS |
| CAGGAGTCCTATCGTTCAAG+TGG | 0.580733 | 5_4:+64839815 | Msa0864460:CDS |
| TGGTCTAATTTACAGCAGCA+AGG | 0.584781 | 5_4:+64839622 | Msa0864460:CDS |
| TTGAAGGATAATGCGACCAC+TGG | 0.591814 | 5_4:-64838282 | None:intergenic |
| CTACAATGAGCTCCGAACCT+CGG | 0.592720 | 5_4:+64838224 | Msa0864460:CDS |
| CGCCAACAACAAAGATATTG+CGG | 0.594240 | 5_4:+64838258 | Msa0864460:CDS |
| AAGCTAAAACAGAATTGCAA+AGG | 0.595572 | 5_4:-64837463 | None:intergenic |
| ATGCCTTGGATTGATCCACC+AGG | 0.606051 | 5_4:+64839796 | Msa0864460:CDS |
| ACATGAACCTGTTATACTTG+AGG | 0.618701 | 5_4:-64838653 | None:intergenic |
| TAGTCTTACCCTTAATGCCA+AGG | 0.619132 | 5_4:-64839905 | None:intergenic |
| GATTGTGAGCATTGGCGGAG+CGG | 0.623842 | 5_4:+64840151 | Msa0864460:CDS |
| GAACCTGTTATACTTGAGGC+TGG | 0.638511 | 5_4:-64838649 | None:intergenic |
| AAAGTGCCTTGAAAATTGCA+AGG | 0.638843 | 5_4:-64838530 | None:intergenic |
| ACTCCTGGTGGATCAATCCA+AGG | 0.644949 | 5_4:-64839799 | None:intergenic |
| TGTAGCAGTTGCAACTGTGT+CGG | 0.648797 | 5_4:+64839525 | Msa0864460:CDS |
| GCCTCCCAACAGAATAACAC+AGG | 0.658463 | 5_4:-64840102 | None:intergenic |
| AGGAGTCCTATCGTTCAAGT+GGG | 0.665530 | 5_4:+64839816 | Msa0864460:CDS |
| GGTTGCTGTTGGGATCATCA+TGG | 0.682153 | 5_4:+64838311 | Msa0864460:CDS |
| TGTTATTCGACTCAGATCCG+GGG | 0.684228 | 5_4:+64840129 | Msa0864460:CDS |
| ACAAAGATATTGCGGACCAG+TGG | 0.685300 | 5_4:+64838266 | Msa0864460:CDS |
| TGATGTAGTGAACAAATGTG+AGG | 0.721156 | 5_4:-64838494 | None:intergenic |
| ATAATGTCCATTCTTCAAGG+AGG | 0.727618 | 5_4:-64837358 | None:intergenic |
| TTGAACGATAGGACTCCTGG+TGG | 0.739730 | 5_4:-64839811 | None:intergenic |
| ACCACTGTAAGAGAAAACCG+AGG | 0.773883 | 5_4:-64839876 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAAATTTTTCAAGATTATTT+TGG | + | chr5_4:64840482-64840501 | Msa0864460:three_prime_UTR | 10.0% |
| !!! | TTGATGTAAATTTTGATTTA+CGG | - | chr5_4:64837175-64837194 | None:intergenic | 15.0% |
| !!! | TTTTCTGTTTTTTCAAATTT+TGG | + | chr5_4:64837900-64837919 | Msa0864460:intron | 15.0% |
| !!! | AAATATGAAATATTTTTTGG+AGG | - | chr5_4:64838014-64838033 | None:intergenic | 15.0% |
| !! | TCCAAAAAATATTTCATATT+TGG | + | chr5_4:64838013-64838032 | Msa0864460:intron | 15.0% |
| !!! | ACCAAATATGAAATATTTTT+TGG | - | chr5_4:64838017-64838036 | None:intergenic | 15.0% |
| !! | ATTATGTAATTCAATTATGA+TGG | - | chr5_4:64838106-64838125 | None:intergenic | 15.0% |
| !! | ATATAATTTATTTCCTTGAA+TGG | + | chr5_4:64839045-64839064 | Msa0864460:intron | 15.0% |
| !! | TATAAACCATTTCAAATATA+TGG | + | chr5_4:64839404-64839423 | Msa0864460:intron | 15.0% |
| !!! | AGACCATAAAATTTTATTTA+TGG | - | chr5_4:64839608-64839627 | None:intergenic | 15.0% |
| !!! | AATTTTACAAAAAGAGAAAT+TGG | - | chr5_4:64839687-64839706 | None:intergenic | 15.0% |
| !! | TATTTGTGTTCAATTCTTAA+TGG | + | chr5_4:64837791-64837810 | Msa0864460:intron | 20.0% |
| !! | GATATAACTTTATTGTTGAT+AGG | + | chr5_4:64838437-64838456 | Msa0864460:intron | 20.0% |
| !! | TTGGTATGAAAAATAAACAA+AGG | - | chr5_4:64838718-64838737 | None:intergenic | 20.0% |
| !! | ATGTTTCAAATTTGTAAATG+TGG | + | chr5_4:64838810-64838829 | Msa0864460:intron | 20.0% |
| !! | AAAGATTATGTTAATTGTCA+TGG | + | chr5_4:64838937-64838956 | Msa0864460:intron | 20.0% |
| !!! | TTGTCATGGATTTTTTTTAA+AGG | + | chr5_4:64838951-64838970 | Msa0864460:intron | 20.0% |
| !!! | TTTTTAAAGGTTAATTGTGA+TGG | + | chr5_4:64838964-64838983 | Msa0864460:intron | 20.0% |
| !! | AAAAACCATTTCTTCAAAAA+AGG | + | chr5_4:64839342-64839361 | Msa0864460:CDS | 20.0% |
| !!! | TCTTTTCCATATATTTGAAA+TGG | - | chr5_4:64839413-64839432 | None:intergenic | 20.0% |
| !! | GTGCATAAAAAATAATTGTA+TGG | - | chr5_4:64839442-64839461 | None:intergenic | 20.0% |
| !!! | GATTTAGAGTTCAATTTATT+TGG | + | chr5_4:64839547-64839566 | Msa0864460:CDS | 20.0% |
| !!! | AAAATTTTATTTATGGCACT+TGG | - | chr5_4:64839601-64839620 | None:intergenic | 20.0% |
| !!! | GTGCCATAAATAAAATTTTA+TGG | + | chr5_4:64839602-64839621 | Msa0864460:CDS | 20.0% |
| !! | ATATTATTATCAATCAATGC+AGG | + | chr5_4:64840036-64840055 | Msa0864460:intron | 20.0% |
| !! | TATTATTATCAATCAATGCA+GGG | + | chr5_4:64840037-64840056 | Msa0864460:intron | 20.0% |
| ! | AAAATAATGTCCATTCTTCA+AGG | - | chr5_4:64837364-64837383 | None:intergenic | 25.0% |
| !! | TTTTCAAACTGCTGATATTT+AGG | - | chr5_4:64837855-64837874 | None:intergenic | 25.0% |
| ! | TAAATATCAGCAGTTTGAAA+AGG | + | chr5_4:64837854-64837873 | Msa0864460:intron | 25.0% |
| ! | AAATATCAGCAGTTTGAAAA+GGG | + | chr5_4:64837855-64837874 | Msa0864460:intron | 25.0% |
| !!! | TATTTGTTATGCTAAGAGTA+AGG | + | chr5_4:64837927-64837946 | Msa0864460:intron | 25.0% |
| ! | GTAAGGTATAAATCTGAATT+TGG | + | chr5_4:64837944-64837963 | Msa0864460:intron | 25.0% |
| !! | AGACTTAATCTTTTATTGCT+TGG | - | chr5_4:64837988-64838007 | None:intergenic | 25.0% |
| ! | TAATGATGCTGATCATAAAT+AGG | + | chr5_4:64838122-64838141 | Msa0864460:intron | 25.0% |
| ! | AATGATGCTGATCATAAATA+GGG | + | chr5_4:64838123-64838142 | Msa0864460:intron | 25.0% |
| ! | TCATCATGGTTAAAATTATC+AGG | + | chr5_4:64838171-64838190 | Msa0864460:intron | 25.0% |
| ! | TTAAAAGTCGATGACTAATT+TGG | - | chr5_4:64838737-64838756 | None:intergenic | 25.0% |
| ! | ATTAGGACAGTAATGAAAAT+TGG | - | chr5_4:64838779-64838798 | None:intergenic | 25.0% |
| ! | AAACATAATGACTGAACATT+AGG | - | chr5_4:64838796-64838815 | None:intergenic | 25.0% |
| !!! | TGTCAACATGGATTTAATTT+TGG | - | chr5_4:64838882-64838901 | None:intergenic | 25.0% |
| ! | CATAGATGAAAAATTAAGTC+TGG | + | chr5_4:64839092-64839111 | Msa0864460:intron | 25.0% |
| !!! | TTTGACCTTTTTTGAAGAAA+TGG | - | chr5_4:64839350-64839369 | None:intergenic | 25.0% |
| ! | GCACTAATTAATCATGTAAT+TGG | + | chr5_4:64839458-64839477 | Msa0864460:intron | 25.0% |
| !!! | TGTTGTGTTTTGTTTAAGTA+AGG | + | chr5_4:64839998-64840017 | Msa0864460:intron | 25.0% |
| ! | CTAATAGTGTTTGAAGAAAT+TGG | - | chr5_4:64840389-64840408 | None:intergenic | 25.0% |
| ! | CAATTTCTTCAAACACTATT+AGG | + | chr5_4:64840387-64840406 | Msa0864460:three_prime_UTR | 25.0% |
| !! | CACTTGTTTGTTGTATGATA+AGG | - | chr5_4:64837200-64837219 | None:intergenic | 30.0% |
| ATATGATACTCCAAGATTGA+TGG | + | chr5_4:64837388-64837407 | Msa0864460:five_prime_UTR | 30.0% | |
| CAAATACAATCCATCAATCT+TGG | - | chr5_4:64837401-64837420 | None:intergenic | 30.0% | |
| ACAGAATTGCAAAGGTAAAA+GGG | - | chr5_4:64837458-64837477 | None:intergenic | 30.0% | |
| AACAGAATTGCAAAGGTAAA+AGG | - | chr5_4:64837459-64837478 | None:intergenic | 30.0% | |
| AAGCTAAAACAGAATTGCAA+AGG | - | chr5_4:64837466-64837485 | None:intergenic | 30.0% | |
| ! | ACAGAACTGTGTTTTACAAA+AGG | + | chr5_4:64837504-64837523 | Msa0864460:five_prime_UTR | 30.0% |
| ATAACAACCAAGCTTATTCA+TGG | - | chr5_4:64837572-64837591 | None:intergenic | 30.0% | |
| ATGAATAAGCTTGGTTGTTA+TGG | + | chr5_4:64837571-64837590 | Msa0864460:exon | 30.0% | |
| TGAATAAGCTTGGTTGTTAT+GGG | + | chr5_4:64837572-64837591 | Msa0864460:exon | 30.0% | |
| ATGGAACATCTAATGAAAGT+AGG | - | chr5_4:64838087-64838106 | None:intergenic | 30.0% | |
| AAAATTATCAGGTAAAGCAC+TGG | + | chr5_4:64838182-64838201 | Msa0864460:intron | 30.0% | |
| AACATACATGCAATATGAGA+AGG | - | chr5_4:64838361-64838380 | None:intergenic | 30.0% | |
| ! | ACTTTATTGTTGATAGGTGA+TGG | + | chr5_4:64838443-64838462 | Msa0864460:intron | 30.0% |
| ! | CTTTATTGTTGATAGGTGAT+GGG | + | chr5_4:64838444-64838463 | Msa0864460:intron | 30.0% |
| GAACAAATGTGAGGAAAATT+GGG | - | chr5_4:64838488-64838507 | None:intergenic | 30.0% | |
| TGAACAAATGTGAGGAAAAT+TGG | - | chr5_4:64838489-64838508 | None:intergenic | 30.0% | |
| AGTGCAAATATAGAAGAGAA+TGG | - | chr5_4:64838591-64838610 | None:intergenic | 30.0% | |
| TTCTCTTCTATATTTGCACT+TGG | + | chr5_4:64838591-64838610 | Msa0864460:CDS | 30.0% | |
| TTTGCTCTAACATGTTTATC+AGG | + | chr5_4:64838677-64838696 | Msa0864460:intron | 30.0% | |
| AAATCTTACTTGACCATTCA+AGG | - | chr5_4:64839061-64839080 | None:intergenic | 30.0% | |
| ! | GAATGGTCAAGTAAGATTTT+TGG | + | chr5_4:64839062-64839081 | Msa0864460:intron | 30.0% |
| ATGAAAAATTAAGTCTGGTC+TGG | + | chr5_4:64839097-64839116 | Msa0864460:intron | 30.0% | |
| AACCTAATTGAAACTTAAGC+TGG | + | chr5_4:64839188-64839207 | Msa0864460:intron | 30.0% | |
| GTGCTATAGTTGCAATTATA+TGG | + | chr5_4:64839569-64839588 | Msa0864460:CDS | 30.0% | |
| TTTCTCATTGTAGATTGATG+TGG | + | chr5_4:64839734-64839753 | Msa0864460:intron | 30.0% | |
| GTAGAATTCTGTGTCAAAAA+GGG | - | chr5_4:64839969-64839988 | None:intergenic | 30.0% | |
| AGTAGAATTCTGTGTCAAAA+AGG | - | chr5_4:64839970-64839989 | None:intergenic | 30.0% | |
| TCAGACAACAATGTTATTGT+TGG | - | chr5_4:64840327-64840346 | None:intergenic | 30.0% | |
| AACAATAACATTGTTGTCTG+AGG | + | chr5_4:64840326-64840345 | Msa0864460:CDS | 30.0% | |
| TAAAAAACCTTGCTGCAAAA+TGG | - | chr5_4:64840429-64840448 | None:intergenic | 30.0% | |
| AAAAACTCCTCCTTGAAGAA+TGG | + | chr5_4:64837351-64837370 | Msa0864460:five_prime_UTR | 35.0% | |
| ATAATGTCCATTCTTCAAGG+AGG | - | chr5_4:64837361-64837380 | None:intergenic | 35.0% | |
| ! | GGATTGTATTTGAAGCAACT+TGG | + | chr5_4:64837409-64837428 | Msa0864460:five_prime_UTR | 35.0% |
| TCTAAGTCCATGAATAAGCT+TGG | + | chr5_4:64837562-64837581 | Msa0864460:five_prime_UTR | 35.0% | |
| AAAAGAAAAGACAGTGATGC+AGG | + | chr5_4:64837635-64837654 | Msa0864460:CDS | 35.0% | |
| TATTCCTGACTCTCTATGAT+TGG | + | chr5_4:64837761-64837780 | Msa0864460:intron | 35.0% | |
| GATCATCATGGCAAACAAAT+TGG | + | chr5_4:64838323-64838342 | Msa0864460:CDS | 35.0% | |
| TGATGTAGTGAACAAATGTG+AGG | - | chr5_4:64838497-64838516 | None:intergenic | 35.0% | |
| ! | GATTCTCCTTGCAATTTTCA+AGG | + | chr5_4:64838524-64838543 | Msa0864460:CDS | 35.0% |
| ! | AAAGTGCCTTGAAAATTGCA+AGG | - | chr5_4:64838533-64838552 | None:intergenic | 35.0% |
| !! | TGCAATTTTCAAGGCACTTT+CGG | + | chr5_4:64838533-64838552 | Msa0864460:CDS | 35.0% |
| !!! | AATGGAGTTGTTTTAGATGG+AGG | - | chr5_4:64838573-64838592 | None:intergenic | 35.0% |
| !!! | GAGAATGGAGTTGTTTTAGA+TGG | - | chr5_4:64838576-64838595 | None:intergenic | 35.0% |
| ACATGAACCTGTTATACTTG+AGG | - | chr5_4:64838656-64838675 | None:intergenic | 35.0% | |
| !! | TGACTTTGTTGTTGTCAACA+TGG | - | chr5_4:64838894-64838913 | None:intergenic | 35.0% |
| CACCAGCTTAAGTTTCAATT+AGG | - | chr5_4:64839193-64839212 | None:intergenic | 35.0% | |
| !! | TGGTGAAGTTTTGTCTAGTT+TGG | + | chr5_4:64839208-64839227 | Msa0864460:intron | 35.0% |
| TAACAGCAATCTTAGCCATT+TGG | - | chr5_4:64839285-64839304 | None:intergenic | 35.0% | |
| TGTTACTCCAACAATTGTTC+TGG | + | chr5_4:64839300-64839319 | Msa0864460:CDS | 35.0% | |
| TAATTGGAATGCAATGATCC+AGG | + | chr5_4:64839474-64839493 | Msa0864460:intron | 35.0% | |
| CCTAGAAAGAAAACTGTGAT+AGG | - | chr5_4:64839769-64839788 | None:intergenic | 35.0% | |
| ! | CCTATCACAGTTTTCTTTCT+AGG | + | chr5_4:64839766-64839785 | Msa0864460:CDS | 35.0% |
| !! | ATTTTGATATCTGCTCTCCT+CGG | + | chr5_4:64839859-64839878 | Msa0864460:CDS | 35.0% |
| !!! | GCTACAACTCATGTTGTTTT+AGG | + | chr5_4:64840068-64840087 | Msa0864460:CDS | 35.0% |
| ! | TAAGACCTGTGTTATTCTGT+TGG | + | chr5_4:64840097-64840116 | Msa0864460:CDS | 35.0% |
| ! | AAGACCTGTGTTATTCTGTT+GGG | + | chr5_4:64840098-64840117 | Msa0864460:CDS | 35.0% |
| GTGTTTGAAGAAATTGGTTG+TGG | - | chr5_4:64840383-64840402 | None:intergenic | 35.0% | |
| CAAACACTATTAGGCAATTC+AGG | + | chr5_4:64840396-64840415 | Msa0864460:three_prime_UTR | 35.0% | |
| ! | TTCAATTCCATTTTGCAGCA+AGG | + | chr5_4:64840419-64840438 | Msa0864460:three_prime_UTR | 35.0% |
| CTTGGTTGTTATGGGATTGT+TGG | + | chr5_4:64837580-64837599 | Msa0864460:exon | 40.0% | |
| GGATTGTTGGATTCACTGTT+GGG | + | chr5_4:64837593-64837612 | Msa0864460:CDS | 40.0% | |
| CATAGAGAGTCAGGAATACA+TGG | - | chr5_4:64837759-64837778 | None:intergenic | 40.0% | |
| AAAGCCAATCATAGAGAGTC+AGG | - | chr5_4:64837768-64837787 | None:intergenic | 40.0% | |
| CATGATGAGAACACTGCATT+AGG | - | chr5_4:64838159-64838178 | None:intergenic | 40.0% | |
| CTAATGCAGTGTTCTCATCA+TGG | + | chr5_4:64838157-64838176 | Msa0864460:intron | 40.0% | |
| !! | ATATCTTTGTTGTTGGCGCT+TGG | - | chr5_4:64838256-64838275 | None:intergenic | 40.0% |
| CGCCAACAACAAAGATATTG+CGG | + | chr5_4:64838258-64838277 | Msa0864460:CDS | 40.0% | |
| ! | GTCCGCAATATCTTTGTTGT+TGG | - | chr5_4:64838263-64838282 | None:intergenic | 40.0% |
| CGCATTATCCTTCAACTTCA+TGG | + | chr5_4:64838290-64838309 | Msa0864460:CDS | 40.0% | |
| AACAGCAACCATGAAGTTGA+AGG | - | chr5_4:64838301-64838320 | None:intergenic | 40.0% | |
| TTCAACTTCATGGTTGCTGT+TGG | + | chr5_4:64838300-64838319 | Msa0864460:CDS | 40.0% | |
| ! | TCAACTTCATGGTTGCTGTT+GGG | + | chr5_4:64838301-64838320 | Msa0864460:CDS | 40.0% |
| TTGTTCACTACATCACTGCA+TGG | + | chr5_4:64838502-64838521 | Msa0864460:CDS | 40.0% | |
| !! | ATTTGCACTTGGTGCTGTTA+TGG | + | chr5_4:64838602-64838621 | Msa0864460:CDS | 40.0% |
| GAACTGTCAGCAAAAAGGAA+AGG | - | chr5_4:64839239-64839258 | None:intergenic | 40.0% | |
| GAACTGAACTGTCAGCAAAA+AGG | - | chr5_4:64839244-64839263 | None:intergenic | 40.0% | |
| !! | CAGTGTTGGTTTCTACCAAA+TGG | + | chr5_4:64839267-64839286 | Msa0864460:intron | 40.0% |
| AACTCTGCCAGAACAATTGT+TGG | - | chr5_4:64839310-64839329 | None:intergenic | 40.0% | |
| ! | GAATGCAATGATCCAGGTTT+TGG | + | chr5_4:64839480-64839499 | Msa0864460:intron | 40.0% |
| !!! | AATGATCCAGGTTTTGGCTT+TGG | + | chr5_4:64839486-64839505 | Msa0864460:intron | 40.0% |
| TGGTCTAATTTACAGCAGCA+AGG | + | chr5_4:64839622-64839641 | Msa0864460:CDS | 40.0% | |
| ATTTACAGCAGCAAGGAAAC+TGG | + | chr5_4:64839629-64839648 | Msa0864460:CDS | 40.0% | |
| TTACATCCCACTTGAACGAT+AGG | - | chr5_4:64839825-64839844 | None:intergenic | 40.0% | |
| ! | TAGTCTTACCCTTAATGCCA+AGG | - | chr5_4:64839908-64839927 | None:intergenic | 40.0% |
| TCTGTTATTCGACTCAGATC+CGG | + | chr5_4:64840127-64840146 | Msa0864460:CDS | 40.0% | |
| GTTGAAGGCAAACTATGCTT+CGG | - | chr5_4:64840254-64840273 | None:intergenic | 40.0% | |
| ! | TCTTTGTTGTCTTCACTAGC+TGG | - | chr5_4:64840287-64840306 | None:intergenic | 40.0% |
| GGGATTGTTGGATTCACTGT+TGG | + | chr5_4:64837592-64837611 | Msa0864460:CDS | 45.0% | |
| TTGGATTCACTGTTGGGAGA+TGG | + | chr5_4:64837599-64837618 | Msa0864460:CDS | 45.0% | |
| AGTCAGGAATACATGGAAGG+AGG | - | chr5_4:64837752-64837771 | None:intergenic | 45.0% | |
| GAGAGTCAGGAATACATGGA+AGG | - | chr5_4:64837755-64837774 | None:intergenic | 45.0% | |
| ACAAAGATATTGCGGACCAG+TGG | + | chr5_4:64838266-64838285 | Msa0864460:CDS | 45.0% | |
| TTGAAGGATAATGCGACCAC+TGG | - | chr5_4:64838285-64838304 | None:intergenic | 45.0% | |
| !! | TGATAGGTGATGGGAAGAGT+TGG | + | chr5_4:64838453-64838472 | Msa0864460:intron | 45.0% |
| !! | GTTTTAGATGGAGGAGACAC+AGG | - | chr5_4:64838564-64838583 | None:intergenic | 45.0% |
| ! | GCTGTTATGGCTTTTGCATC+TGG | + | chr5_4:64838615-64838634 | Msa0864460:CDS | 45.0% |
| ACACCAGCCTCAAGTATAAC+AGG | + | chr5_4:64838646-64838665 | Msa0864460:CDS | 45.0% | |
| GAACCTGTTATACTTGAGGC+TGG | - | chr5_4:64838652-64838671 | None:intergenic | 45.0% | |
| CAGTTCAGTTCATGCAGTGT+TGG | + | chr5_4:64839253-64839272 | Msa0864460:intron | 45.0% | |
| TGTAGCAGTTGCAACTGTGT+CGG | + | chr5_4:64839525-64839544 | Msa0864460:CDS | 45.0% | |
| ! | TTCTAGGAGCTTTGATGCCT+TGG | + | chr5_4:64839782-64839801 | Msa0864460:CDS | 45.0% |
| AGGAGTCCTATCGTTCAAGT+GGG | + | chr5_4:64839816-64839835 | Msa0864460:CDS | 45.0% | |
| ! | TCCTCGGTTTTCTCTTACAG+TGG | + | chr5_4:64839875-64839894 | Msa0864460:CDS | 45.0% |
| ACCACTGTAAGAGAAAACCG+AGG | - | chr5_4:64839879-64839898 | None:intergenic | 45.0% | |
| ! | GGTTTTCTCTTACAGTGGTC+AGG | + | chr5_4:64839880-64839899 | Msa0864460:CDS | 45.0% |
| ! | ACCTGTGTTATTCTGTTGGG+AGG | + | chr5_4:64840101-64840120 | Msa0864460:CDS | 45.0% |
| CTGTTATTCGACTCAGATCC+GGG | + | chr5_4:64840128-64840147 | Msa0864460:CDS | 45.0% | |
| TGTTATTCGACTCAGATCCG+GGG | + | chr5_4:64840129-64840148 | Msa0864460:CDS | 45.0% | |
| TGTTGCTCTCACTGGAATGT+CGG | + | chr5_4:64840175-64840194 | Msa0864460:CDS | 45.0% | |
| !!! | GCTGGTTTTTGCTGTGTTGA+AGG | - | chr5_4:64840269-64840288 | None:intergenic | 45.0% |
| !!! | ATTTGATTTATATAAAAAAT+TGG | + | chr5_4:64837720-64837739 | Msa0864460:intron | 5.0% |
| GACAGTGATGCAGGAGAAAC+AGG | + | chr5_4:64837644-64837663 | Msa0864460:CDS | 50.0% | |
| CTACAATGAGCTCCGAACCT+CGG | + | chr5_4:64838224-64838243 | Msa0864460:CDS | 50.0% | |
| ! | GGTTGCTGTTGGGATCATCA+TGG | + | chr5_4:64838311-64838330 | Msa0864460:CDS | 50.0% |
| GCAAGGAAACTGGACAGCTT+TGG | + | chr5_4:64839639-64839658 | Msa0864460:CDS | 50.0% | |
| ATGCCTTGGATTGATCCACC+AGG | + | chr5_4:64839796-64839815 | Msa0864460:CDS | 50.0% | |
| ! | ACTCCTGGTGGATCAATCCA+AGG | - | chr5_4:64839802-64839821 | None:intergenic | 50.0% |
| TTGAACGATAGGACTCCTGG+TGG | - | chr5_4:64839814-64839833 | None:intergenic | 50.0% | |
| CACTTGAACGATAGGACTCC+TGG | - | chr5_4:64839817-64839836 | None:intergenic | 50.0% | |
| CAGGAGTCCTATCGTTCAAG+TGG | + | chr5_4:64839815-64839834 | Msa0864460:CDS | 50.0% | |
| GTCAGGTGCCTTGGCATTAA+GGG | + | chr5_4:64839897-64839916 | Msa0864460:CDS | 50.0% | |
| GCCTCCCAACAGAATAACAC+AGG | - | chr5_4:64840105-64840124 | None:intergenic | 50.0% | |
| AATGAGCTCCGAACCTCGGA+AGG | + | chr5_4:64838228-64838247 | Msa0864460:CDS | 55.0% | |
| CAGCAGCCAAAGCCAAAACC+TGG | - | chr5_4:64839495-64839514 | None:intergenic | 55.0% | |
| GCTTTGGCTGCTGTATCAGC+TGG | + | chr5_4:64839502-64839521 | Msa0864460:CDS | 55.0% | |
| CTTACAGTGGTCAGGTGCCT+TGG | + | chr5_4:64839888-64839907 | Msa0864460:CDS | 55.0% | |
| GGTCAGGTGCCTTGGCATTA+AGG | + | chr5_4:64839896-64839915 | Msa0864460:CDS | 55.0% | |
| GATCCGGGGATTGTGAGCAT+TGG | + | chr5_4:64840143-64840162 | Msa0864460:CDS | 55.0% | |
| !! | GATTGTGAGCATTGGCGGAG+CGG | + | chr5_4:64840151-64840170 | Msa0864460:CDS | 55.0% |
| GCTTGGCTCCTTCCGAGGTT+CGG | - | chr5_4:64838239-64838258 | None:intergenic | 60.0% | |
| CCGCCAATGCTCACAATCCC+CGG | - | chr5_4:64840149-64840168 | None:intergenic | 60.0% | |
| !! | CCGGGGATTGTGAGCATTGG+CGG | + | chr5_4:64840146-64840165 | Msa0864460:CDS | 60.0% |
| GGAGCGGTTGTTGCTCTCAC+TGG | + | chr5_4:64840167-64840186 | Msa0864460:CDS | 60.0% | |
| TTGGCGCTTGGCTCCTTCCG+AGG | - | chr5_4:64838244-64838263 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5_4 | gene | 64837167 | 64840505 | 64837167 | ID=Msa0864460;Name=Msa0864460 |
| chr5_4 | mRNA | 64837167 | 64840505 | 64837167 | ID=Msa0864460-mRNA-1;Parent=Msa0864460;Name=Msa0864460-mRNA-1;_AED=0.12;_eAED=0.12;_QI=423|0.71|0.87|0.87|0.71|0.87|8|159|391 |
| chr5_4 | exon | 64837167 | 64837665 | 64837167 | ID=Msa0864460-mRNA-1:exon:20391;Parent=Msa0864460-mRNA-1 |
| chr5_4 | exon | 64838193 | 64838344 | 64838193 | ID=Msa0864460-mRNA-1:exon:20392;Parent=Msa0864460-mRNA-1 |
| chr5_4 | exon | 64838459 | 64838667 | 64838459 | ID=Msa0864460-mRNA-1:exon:20393;Parent=Msa0864460-mRNA-1 |
| chr5_4 | exon | 64839270 | 64839363 | 64839270 | ID=Msa0864460-mRNA-1:exon:20394;Parent=Msa0864460-mRNA-1 |
| chr5_4 | exon | 64839496 | 64839662 | 64839496 | ID=Msa0864460-mRNA-1:exon:20395;Parent=Msa0864460-mRNA-1 |
| chr5_4 | exon | 64839747 | 64839918 | 64839747 | ID=Msa0864460-mRNA-1:exon:20396;Parent=Msa0864460-mRNA-1 |
| chr5_4 | exon | 64839998 | 64840014 | 64839998 | ID=Msa0864460-mRNA-1:exon:20397;Parent=Msa0864460-mRNA-1 |
| chr5_4 | exon | 64840058 | 64840505 | 64840058 | ID=Msa0864460-mRNA-1:exon:20398;Parent=Msa0864460-mRNA-1 |
| chr5_4 | five_prime_UTR | 64837167 | 64837589 | 64837167 | ID=Msa0864460-mRNA-1:five_prime_utr;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64837590 | 64837665 | 64837590 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64838193 | 64838344 | 64838193 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64838459 | 64838667 | 64838459 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64839270 | 64839363 | 64839270 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64839496 | 64839662 | 64839496 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64839747 | 64839918 | 64839747 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64839998 | 64840014 | 64839998 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | CDS | 64840058 | 64840346 | 64840058 | ID=Msa0864460-mRNA-1:cds;Parent=Msa0864460-mRNA-1 |
| chr5_4 | three_prime_UTR | 64840347 | 64840505 | 64840347 | ID=Msa0864460-mRNA-1:three_prime_utr;Parent=Msa0864460-mRNA-1 |
| Gene Sequence |
| Protein sequence |
