Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876040 | XP_013451291.1 | 90.210 | 143 | 13 | 1 | 609 | 751 | 493 | 634 | 1.43e-73 | 262 |
| Msa0876040 | XP_013451291.1 | 94.805 | 616 | 30 | 2 | 1 | 614 | 1 | 616 | 0.0 | 1162 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876040 | sp|Q96GN5|CDA7L_HUMAN | 47.059 | 119 | 58 | 3 | 39 | 155 | 339 | 454 | 1.62e-25 | 114 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|---|---|
| Msa0876040 | TR | DDT |
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0624900 | Msa0876040 | 0.808811 | 2.577601e-50 | -8.615850e-47 |
| Msa0795870 | Msa0876040 | 0.808653 | 2.786169e-50 | -8.615850e-47 |
| Msa0833650 | Msa0876040 | 0.800375 | 1.484116e-48 | -8.615850e-47 |
| Msa0310850 | Msa0876040 | 0.801229 | 9.937990e-49 | -8.615850e-47 |
| Msa0361910 | Msa0876040 | 0.817002 | 4.132610e-52 | -8.615850e-47 |
| Msa0876040 | Msa0941170 | 0.878190 | 3.431707e-69 | -8.615850e-47 |
| Msa0876040 | Msa0978300 | 0.829358 | 5.381984e-55 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876040 | MtrunA17_Chr6g0457161 | 94.805 | 616 | 30 | 2 | 1 | 614 | 1 | 616 | 0.0 | 1162 |
| Msa0876040 | MtrunA17_Chr6g0457161 | 90.210 | 143 | 13 | 1 | 609 | 751 | 493 | 634 | 1.31e-77 | 262 |
| Msa0876040 | MtrunA17_Chr6g0457221 | 73.318 | 446 | 88 | 1 | 169 | 614 | 302 | 716 | 0.0 | 632 |
| Msa0876040 | MtrunA17_Chr6g0457221 | 77.990 | 209 | 37 | 3 | 1 | 208 | 1 | 201 | 1.07e-99 | 323 |
| Msa0876040 | MtrunA17_Chr6g0457221 | 72.028 | 143 | 39 | 1 | 609 | 751 | 593 | 734 | 5.47e-60 | 216 |
| Msa0876040 | MtrunA17_Chr5g0402951 | 41.912 | 136 | 74 | 2 | 36 | 169 | 148 | 280 | 4.44e-25 | 108 |
| Msa0876040 | MtrunA17_Chr5g0402961 | 42.857 | 119 | 59 | 2 | 36 | 151 | 150 | 262 | 1.28e-22 | 101 |
| Msa0876040 | MtrunA17_Chr4g0045521 | 36.029 | 136 | 70 | 4 | 41 | 171 | 171 | 294 | 1.14e-18 | 87.8 |
| Msa0876040 | MtrunA17_Chr6g0479091 | 38.129 | 139 | 59 | 5 | 29 | 144 | 156 | 290 | 3.04e-16 | 80.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0876040 | AT5G38690.2 | 40.133 | 603 | 301 | 13 | 17 | 614 | 1 | 548 | 3.81e-122 | 378 |
| Msa0876040 | AT5G38690.2 | 47.368 | 133 | 65 | 4 | 612 | 742 | 428 | 557 | 4.44e-22 | 101 |
| Msa0876040 | AT5G38690.1 | 40.133 | 603 | 301 | 13 | 17 | 614 | 1 | 548 | 3.81e-122 | 378 |
| Msa0876040 | AT5G38690.1 | 47.368 | 133 | 65 | 4 | 612 | 742 | 428 | 557 | 4.44e-22 | 101 |
| Msa0876040 | AT1G67270.1 | 40.385 | 312 | 175 | 6 | 309 | 614 | 176 | 482 | 4.18e-51 | 186 |
| Msa0876040 | AT1G67270.1 | 63.248 | 117 | 43 | 0 | 28 | 144 | 2 | 118 | 5.04e-44 | 166 |
| Msa0876040 | AT1G67270.1 | 40.541 | 111 | 62 | 3 | 625 | 734 | 376 | 483 | 4.14e-15 | 79.3 |
| Msa0876040 | AT1G67780.2 | 66.667 | 120 | 40 | 0 | 25 | 144 | 7 | 126 | 2.57e-49 | 181 |
| Msa0876040 | AT1G67780.2 | 38.141 | 312 | 185 | 5 | 303 | 612 | 182 | 487 | 5.96e-48 | 177 |
| Msa0876040 | AT1G67780.2 | 37.815 | 119 | 70 | 3 | 625 | 742 | 383 | 498 | 8.31e-15 | 78.6 |
| Msa0876040 | AT1G67780.1 | 66.667 | 120 | 40 | 0 | 25 | 144 | 7 | 126 | 2.57e-49 | 181 |
| Msa0876040 | AT1G67780.1 | 38.141 | 312 | 185 | 5 | 303 | 612 | 182 | 487 | 5.96e-48 | 177 |
| Msa0876040 | AT1G67780.1 | 37.815 | 119 | 70 | 3 | 625 | 742 | 383 | 498 | 8.31e-15 | 78.6 |
| Msa0876040 | AT2G23530.1 | 46.552 | 116 | 51 | 3 | 41 | 151 | 153 | 262 | 2.14e-23 | 105 |
| Msa0876040 | AT4G37110.3 | 41.129 | 124 | 58 | 3 | 41 | 155 | 76 | 193 | 2.69e-20 | 93.2 |
| Msa0876040 | AT4G37110.4 | 41.129 | 124 | 58 | 3 | 41 | 155 | 76 | 193 | 2.69e-20 | 93.2 |
| Msa0876040 | AT4G37110.2 | 41.129 | 124 | 58 | 3 | 41 | 155 | 158 | 275 | 1.06e-19 | 92.8 |
| Msa0876040 | AT4G37110.1 | 41.129 | 124 | 58 | 3 | 41 | 155 | 171 | 288 | 1.12e-19 | 92.8 |
Find 150 sgRNAs with CRISPR-Local
Find 615 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGGGAATGTTTAAGTTATTT+TGG | 0.196371 | 6_1:+13426803 | None:intergenic |
| GCCTTCAAAAGAAGCTAATT+TGG | 0.197118 | 6_1:-13423936 | Msa0876040:CDS |
| CAAATCTTCAGAAGCCTTCT+TGG | 0.214150 | 6_1:+13423982 | None:intergenic |
| AAACTCAAGGTCTAATATTT+TGG | 0.223991 | 6_1:+13423267 | None:intergenic |
| GATGAAAAGTGGTTTGTTTA+TGG | 0.233780 | 6_1:-13416444 | Msa0876040:CDS |
| CAAGAAGGCTTCTGAAGATT+TGG | 0.251002 | 6_1:-13423981 | Msa0876040:CDS |
| ATGTGGAAACAAAGGTTTAA+AGG | 0.266600 | 6_1:-13423686 | Msa0876040:CDS |
| AGAATTACCTTGTAACAAAA+AGG | 0.268700 | 6_1:+13420926 | None:intergenic |
| TTCTTCTCTACTAACAATAA+TGG | 0.283179 | 6_1:-13426702 | Msa0876040:exon |
| CCGGCGGATTGGCTCAATAA+AGG | 0.311364 | 6_1:-13422378 | Msa0876040:CDS |
| AAATTCATGGTTGAAAGTTC+TGG | 0.316231 | 6_1:-13422442 | Msa0876040:CDS |
| AATGAAGCGGGAAAAGTTAA+AGG | 0.325185 | 6_1:-13423641 | Msa0876040:CDS |
| CTTTATCTGTGATGAAGCTT+TGG | 0.335217 | 6_1:-13422304 | Msa0876040:CDS |
| TCAAAGTCAACAGCTTGATT+TGG | 0.342350 | 6_1:+13422632 | None:intergenic |
| GCCACAAATGCCTCTTGAAC+AGG | 0.344140 | 6_1:-13424396 | Msa0876040:intron |
| TCACGCGGTGTTCGTGTTAT+CGG | 0.347596 | 6_1:-13426584 | Msa0876040:CDS |
| CAATGCATTCCCAACATCTT+CGG | 0.349577 | 6_1:+13423240 | None:intergenic |
| AACTAAACTGAAGTCATCTT+TGG | 0.351197 | 6_1:+13416366 | None:intergenic |
| TTTCTCTCATGCATTAGATT+AGG | 0.358747 | 6_1:+13423415 | None:intergenic |
| TGATGATCAAAATGCAATAT+TGG | 0.363141 | 6_1:-13422106 | Msa0876040:CDS |
| ATAATAGCGGTAATGCATTC+TGG | 0.364125 | 6_1:-13416639 | Msa0876040:CDS |
| ATAATAGCGGTAATGCATTC+TGG | 0.364125 | 6_1:-13420977 | Msa0876040:CDS |
| GTTCATTCGGCCAAGGCATC+TGG | 0.374492 | 6_1:-13424031 | Msa0876040:CDS |
| TTAGAATTCTGCAGAGTGTT+TGG | 0.375943 | 6_1:-13423211 | Msa0876040:CDS |
| GGAATTCGCGAAAATGAGTT+TGG | 0.383437 | 6_1:+13426753 | None:intergenic |
| GAGGATTTGATTACTGAATC+TGG | 0.390946 | 6_1:-13422420 | Msa0876040:CDS |
| ACATTTCCTCTAGGAGAGAT+TGG | 0.391866 | 6_1:-13416392 | Msa0876040:CDS |
| GCAAAAGCTGCTATATCAAA+TGG | 0.394679 | 6_1:-13417619 | Msa0876040:CDS |
| GCAAAAGCTGCTATATCAAA+TGG | 0.394679 | 6_1:-13421900 | Msa0876040:CDS |
| CGAATCTATGATTCTGAAAA+CGG | 0.402121 | 6_1:-13426557 | Msa0876040:CDS |
| TCCCACCTTGTGTGAGGTGG+CGG | 0.404195 | 6_1:+13426856 | None:intergenic |
| CATTAGCGGATATAATGATT+TGG | 0.411027 | 6_1:-13422355 | Msa0876040:CDS |
| AAAAGAAGCTAATTTGGATA+AGG | 0.413397 | 6_1:-13423930 | Msa0876040:intron |
| AAGTCTTAAGCAAAAGTTGC+AGG | 0.414891 | 6_1:-13417650 | Msa0876040:CDS |
| AAGTCTTAAGCAAAAGTTGC+AGG | 0.414891 | 6_1:-13421931 | Msa0876040:CDS |
| TTTATCTGTGATGAAGCTTT+GGG | 0.420372 | 6_1:-13422303 | Msa0876040:CDS |
| TGGTCAGATGGATGCTCCTA+AGG | 0.425400 | 6_1:-13423467 | Msa0876040:CDS |
| TACTGGTATACTAGTTCATT+CGG | 0.430354 | 6_1:-13424044 | Msa0876040:CDS |
| CAGAGTCATGGAATGATTCC+TGG | 0.431809 | 6_1:-13423487 | Msa0876040:CDS |
| AATGAAAGCAGCAAAATCTA+AGG | 0.435911 | 6_1:-13422076 | Msa0876040:CDS |
| GAGAATTGAACCTGAGTACT+TGG | 0.439150 | 6_1:-13421000 | Msa0876040:CDS |
| AGGTAGATCTATTGAATGAT+TGG | 0.443425 | 6_1:-13424229 | Msa0876040:CDS |
| ACACAAGGCTTCCCACCTCT+TGG | 0.444496 | 6_1:+13424430 | None:intergenic |
| AGTTTGCACCCGAAGATGTT+GGG | 0.446171 | 6_1:-13423249 | Msa0876040:CDS |
| ACCTGTTCAAGAGGCATTTG+TGG | 0.447431 | 6_1:+13424395 | None:intergenic |
| GAGAATTGAGCCTGAGTACT+TGG | 0.448954 | 6_1:-13416662 | Msa0876040:CDS |
| TTGCAGATTCCTTTGCACTT+TGG | 0.454542 | 6_1:+13424200 | None:intergenic |
| GTGGGAAGCCTTGTGTCATC+AGG | 0.455659 | 6_1:-13424423 | Msa0876040:CDS |
| GAAGAAATTCCTTTGCCCCT+TGG | 0.459527 | 6_1:-13423301 | Msa0876040:CDS |
| AGAATTACCTTGTAACAGAA+AGG | 0.467457 | 6_1:+13416585 | None:intergenic |
| AATGCATTCCCAACATCTTC+GGG | 0.470221 | 6_1:+13423241 | None:intergenic |
| CTGTTGAAGTTGATGAAAAG+TGG | 0.475523 | 6_1:-13416455 | Msa0876040:CDS |
| CTTGTGTGAGGTGGCGGGAA+CGG | 0.479112 | 6_1:+13426862 | None:intergenic |
| TTCTCACTGCATCACAGCAT+TGG | 0.484712 | 6_1:+13421018 | None:intergenic |
| TGAATTTAGATATGGGGAAA+AGG | 0.485817 | 6_1:-13424258 | Msa0876040:intron |
| ATCTAAGGTCGCTGAAGCTA+AGG | 0.488219 | 6_1:-13422061 | Msa0876040:CDS |
| ATATGGGGAAAAGGCGGAAG+AGG | 0.489139 | 6_1:-13424249 | Msa0876040:CDS |
| TCATTTGCAGAACAAGCCTT+AGG | 0.494943 | 6_1:+13423451 | None:intergenic |
| TTCTCACAGCATCAAAGCAT+TGG | 0.495014 | 6_1:+13416680 | None:intergenic |
| AAGAAATGCAGATGCTGATA+CGG | 0.495332 | 6_1:-13423524 | Msa0876040:CDS |
| TTTATATCTTCAGGAAGCTA+AGG | 0.495609 | 6_1:-13422137 | Msa0876040:intron |
| AAGTTAAAGGAAATATCTAA+TGG | 0.496876 | 6_1:-13423628 | Msa0876040:CDS |
| GGTCGCTGAAGCTAAGGAAA+AGG | 0.499427 | 6_1:-13422055 | Msa0876040:intron |
| ATCTCAGTGCCAAGGGGCAA+AGG | 0.499850 | 6_1:+13423292 | None:intergenic |
| ATGCATTAGATTAGGAATGA+AGG | 0.503395 | 6_1:+13423423 | None:intergenic |
| GTTGTTATTGTTGATGCGAA+TGG | 0.508281 | 6_1:-13426635 | Msa0876040:CDS |
| GAAACTCCGTTGGAAAGTTT+AGG | 0.513228 | 6_1:+13423562 | None:intergenic |
| AATGAGTTGCTTGAGGCAAA+AGG | 0.514548 | 6_1:-13421807 | Msa0876040:CDS |
| GAGAAGGAAAACTCATTATG+TGG | 0.515037 | 6_1:-13423703 | Msa0876040:CDS |
| GTCAGCAATGCTTACCAAGA+AGG | 0.517036 | 6_1:-13423996 | Msa0876040:CDS |
| CAAAAGCTGCTATATCAAAT+GGG | 0.521186 | 6_1:-13417618 | Msa0876040:CDS |
| CAAAAGCTGCTATATCAAAT+GGG | 0.521186 | 6_1:-13421899 | Msa0876040:CDS |
| TGTTTATGGAGAGGAGCAGA+AGG | 0.521217 | 6_1:-13416430 | Msa0876040:CDS |
| ACTGAGTTGCTTGAGGCAAA+AGG | 0.521553 | 6_1:-13417526 | Msa0876040:CDS |
| GCAAAAGTTGCAGGATGAGA+TGG | 0.522189 | 6_1:-13417641 | Msa0876040:CDS |
| GCAAAAGTTGCAGGATGAGA+TGG | 0.522189 | 6_1:-13421922 | Msa0876040:CDS |
| CCCACCTTGTGTGAGGTGGC+GGG | 0.522224 | 6_1:+13426857 | None:intergenic |
| CTTCAACAGCATCTTCATCA+TGG | 0.523773 | 6_1:+13416469 | None:intergenic |
| CAGGCTCTCGATCTTAAGAA+AGG | 0.525138 | 6_1:-13422733 | Msa0876040:CDS |
| CATCATATTCTGAAATTGAG+AGG | 0.525339 | 6_1:+13417590 | None:intergenic |
| CATCATATTCTGAAATTGAG+AGG | 0.525339 | 6_1:+13421871 | None:intergenic |
| GAATATACCTTTCTGTTACA+AGG | 0.528947 | 6_1:-13416592 | Msa0876040:intron |
| TATAGCATTTGTTTGAGACT+TGG | 0.529038 | 6_1:+13423348 | None:intergenic |
| CTTCAACACCGTCTTCATCA+TGG | 0.529243 | 6_1:+13420810 | None:intergenic |
| TTGAAAACAAGAAATCGAAA+AGG | 0.536877 | 6_1:-13423585 | Msa0876040:CDS |
| AGAAAACAGAGAAAATGAAG+CGG | 0.538273 | 6_1:-13423654 | Msa0876040:CDS |
| AGGTCTTCATCCTTAACTGC+TGG | 0.539184 | 6_1:-13422474 | Msa0876040:CDS |
| TGGAGAGGAGCAGAAGGATG+AGG | 0.543438 | 6_1:-13416424 | Msa0876040:CDS |
| AACTCATTATGTGGAAACAA+AGG | 0.544075 | 6_1:-13423694 | Msa0876040:CDS |
| AGAGTTAAAACCAGATGCCT+TGG | 0.544879 | 6_1:+13424021 | None:intergenic |
| GAGTTTGCACCCGAAGATGT+TGG | 0.546808 | 6_1:-13423250 | Msa0876040:CDS |
| TCACTAAGTACATTTCCTCT+AGG | 0.548858 | 6_1:-13416401 | Msa0876040:CDS |
| TTGTGTTGAATTTAGATATG+GGG | 0.549696 | 6_1:-13424264 | Msa0876040:intron |
| TGGAATGATTCCTGGTCAGA+TGG | 0.550104 | 6_1:-13423479 | Msa0876040:CDS |
| AAAAGAGGTCATCAACCTAC+TGG | 0.550909 | 6_1:-13424061 | Msa0876040:CDS |
| TCATCCTTAACTGCTGGCAA+TGG | 0.553708 | 6_1:-13422468 | Msa0876040:CDS |
| CATCTTCGGGTGCAAACTCA+AGG | 0.554272 | 6_1:+13423254 | None:intergenic |
| TTTGGTCATCTCAGTGCCAA+GGG | 0.556107 | 6_1:+13423285 | None:intergenic |
| GATCTTAAGAAAGGAGAAGC+AGG | 0.557446 | 6_1:-13422724 | Msa0876040:CDS |
| GAAAACAGAGAAAATGAAGC+GGG | 0.561741 | 6_1:-13423653 | Msa0876040:CDS |
| TCTATCGTGGGAACCTGAGA+AGG | 0.565754 | 6_1:-13423719 | Msa0876040:CDS |
| CATCACAGATAAAGTTCAGA+AGG | 0.568147 | 6_1:+13422313 | None:intergenic |
| TTCATGGTTGAAAGTTCTGG+AGG | 0.569469 | 6_1:-13422439 | Msa0876040:CDS |
| TGGAGCTGAGCAGAAGGATG+AGG | 0.569888 | 6_1:-13420765 | Msa0876040:intron |
| ACAAAAGTAGAGCAGAGTCA+TGG | 0.571075 | 6_1:-13423499 | Msa0876040:CDS |
| TGTTTATGGAGCTGAGCAGA+AGG | 0.575038 | 6_1:-13420771 | Msa0876040:CDS |
| CTTTCCAACGGAGTTTCCGA+TGG | 0.577921 | 6_1:-13423556 | Msa0876040:CDS |
| TGGCTCAATAAAGGCATTAG+CGG | 0.579791 | 6_1:-13422369 | Msa0876040:CDS |
| CCGCTATTATCCAAGTACTC+AGG | 0.581440 | 6_1:+13420990 | None:intergenic |
| CCTTTATTGAGCCAATCCGC+CGG | 0.584341 | 6_1:+13422378 | None:intergenic |
| ATCACCATCGGAAACTCCGT+TGG | 0.585594 | 6_1:+13423552 | None:intergenic |
| ATTTCCCACCTTGTGTGAGG+TGG | 0.587782 | 6_1:+13426853 | None:intergenic |
| AAAGTGGTTTGTTTATGGAG+AGG | 0.592667 | 6_1:-13416439 | Msa0876040:CDS |
| AGCTTGTAGTGGATCTATCG+TGG | 0.595872 | 6_1:-13423732 | Msa0876040:CDS |
| TTTGTAAGAATCCAAGAGGT+GGG | 0.597972 | 6_1:-13424441 | Msa0876040:CDS |
| TTAGGAGCATCCATCTGACC+AGG | 0.598633 | 6_1:+13423469 | None:intergenic |
| AAACGGCAAATCTTGTCACC+AGG | 0.599421 | 6_1:-13426540 | Msa0876040:intron |
| CGTTCCCGCCACCTCACACA+AGG | 0.599755 | 6_1:-13426861 | Msa0876040:five_prime_UTR |
| GGGAACCAAACCTGTTCAAG+AGG | 0.602392 | 6_1:+13424386 | None:intergenic |
| GCGACGTGGACAAAATGCCT+TGG | 0.606782 | 6_1:-13422665 | Msa0876040:CDS |
| TATACTACAGGAGCTTGTAG+TGG | 0.607942 | 6_1:-13423743 | Msa0876040:intron |
| CCGCTATTATCCAAGTACTC+AGG | 0.608269 | 6_1:+13416652 | None:intergenic |
| TGGAATTGTCCAAAGTGCAA+AGG | 0.608508 | 6_1:-13424209 | Msa0876040:CDS |
| ACTAAAACTGAAAGAGAGTG+AGG | 0.609276 | 6_1:-13426660 | Msa0876040:CDS |
| CCCGCCACCTCACACAAGGT+GGG | 0.609602 | 6_1:-13426857 | Msa0876040:five_prime_UTR |
| TCCCGCCACCTCACACAAGG+TGG | 0.612041 | 6_1:-13426858 | Msa0876040:five_prime_UTR |
| ATAGCTGATGGTGAAAATGC+TGG | 0.614269 | 6_1:-13423373 | Msa0876040:CDS |
| GCTTGTAGTGGATCTATCGT+GGG | 0.618962 | 6_1:-13423731 | Msa0876040:CDS |
| ACGTGGACAAAATGCCTTGG+TGG | 0.621055 | 6_1:-13422662 | Msa0876040:CDS |
| AGCTCGTACTGAGTTGCTTG+AGG | 0.622099 | 6_1:-13417533 | Msa0876040:CDS |
| CAGCTATCACAACAGTACCT+TGG | 0.622207 | 6_1:+13423389 | None:intergenic |
| GTTTGTAAGAATCCAAGAGG+TGG | 0.622289 | 6_1:-13424442 | Msa0876040:CDS |
| AGCTCGTAATGAGTTGCTTG+AGG | 0.624768 | 6_1:-13421814 | Msa0876040:CDS |
| TGGCAGAACCTGATGACACA+AGG | 0.625463 | 6_1:+13424415 | None:intergenic |
| ATTTAGATATGGGGAAAAGG+CGG | 0.637070 | 6_1:-13424255 | Msa0876040:intron |
| TATACTAGTTCATTCGGCCA+AGG | 0.638076 | 6_1:-13424038 | Msa0876040:CDS |
| TTGATTTCCCACCTTGTGTG+AGG | 0.650041 | 6_1:+13426850 | None:intergenic |
| CCTGAGTACTTGGATAATAG+CGG | 0.652359 | 6_1:-13420990 | Msa0876040:CDS |
| AAAAGGCCTAAACTTTCCAA+CGG | 0.658766 | 6_1:-13423568 | Msa0876040:CDS |
| CCTGAGTACTTGGATAATAG+CGG | 0.658808 | 6_1:-13416652 | Msa0876040:CDS |
| ATTCTGCAGAGTGTTTGGAA+AGG | 0.667054 | 6_1:-13423206 | Msa0876040:intron |
| GGTACTGTTGTGATAGCTGA+TGG | 0.670403 | 6_1:-13423385 | Msa0876040:CDS |
| TGGTAACCAATCTCTCCTAG+AGG | 0.673606 | 6_1:+13416386 | None:intergenic |
| ATGCATGAGAGAAATTGCCA+AGG | 0.684406 | 6_1:-13423406 | Msa0876040:CDS |
| GCTGTTTGTAAGAATCCAAG+AGG | 0.685376 | 6_1:-13424445 | Msa0876040:CDS |
| GAATGAACTAGTATACCAGT+AGG | 0.685417 | 6_1:+13424046 | None:intergenic |
| GATTTGGAACTCAACCACCA+AGG | 0.685839 | 6_1:+13422648 | None:intergenic |
| CGTAAGCAAAATTTGCGACG+TGG | 0.687278 | 6_1:-13422679 | Msa0876040:CDS |
| GTGAAGATCCATGATGAAGA+CGG | 0.694027 | 6_1:-13420818 | Msa0876040:CDS |
| TTGGTCATCTCAGTGCCAAG+GGG | 0.704568 | 6_1:+13423286 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATAATAAAAAAAAAAA+AGG | + | chr6_1:13421036-13421055 | None:intergenic | 0.0% |
| !!! | TTTATTTTTCATATTAACTT+CGG | + | chr6_1:13418434-13418453 | None:intergenic | 10.0% |
| !! | TGAAAAATAAAAAATTTCTT+TGG | - | chr6_1:13418443-13418462 | Msa0876040:intron | 10.0% |
| !!! | ATTTGTTATTTCATTTTTAA+AGG | - | chr6_1:13420671-13420690 | Msa0876040:intron | 10.0% |
| !!! | TTTGTTATTTCATTTTTAAA+GGG | - | chr6_1:13420672-13420691 | Msa0876040:intron | 10.0% |
| !!! | TTTAATTTGTATAGTATATT+TGG | - | chr6_1:13420704-13420723 | Msa0876040:intron | 10.0% |
| !!! | CAAAAAAAAAAAGAATTTTT+TGG | + | chr6_1:13422951-13422970 | None:intergenic | 10.0% |
| !!! | TCATTTTTGAAAATTATTGT+TGG | - | chr6_1:13416850-13416869 | Msa0876040:intron | 15.0% |
| !!! | TCATTTTCTCAAATTATTAT+TGG | + | chr6_1:13417261-13417280 | None:intergenic | 15.0% |
| !! | AATCGAAAAAAATTATTTGA+TGG | - | chr6_1:13418003-13418022 | Msa0876040:intron | 15.0% |
| !! | ATCGAAAAAAATTATTTGAT+GGG | - | chr6_1:13418004-13418023 | Msa0876040:intron | 15.0% |
| !! | AAATTAAGATCAAATAAAGA+TGG | - | chr6_1:13418131-13418150 | Msa0876040:intron | 15.0% |
| !! | AATTAAGATCAAATAAAGAT+GGG | - | chr6_1:13418132-13418151 | Msa0876040:intron | 15.0% |
| !!! | TTATTTTTCATATTAACTTC+GGG | + | chr6_1:13418433-13418452 | None:intergenic | 15.0% |
| !! | AAAACCAAATTAAAAAAAGA+GGG | + | chr6_1:13418871-13418890 | None:intergenic | 15.0% |
| !! | TAAAACCAAATTAAAAAAAG+AGG | + | chr6_1:13418872-13418891 | None:intergenic | 15.0% |
| !!! | TTGAAAATATGTTTTGAATT+TGG | - | chr6_1:13419083-13419102 | Msa0876040:intron | 15.0% |
| !!! | TTTGTTTTCTTTTTAAGTTT+TGG | - | chr6_1:13420207-13420226 | Msa0876040:intron | 15.0% |
| !! | CTAACTTAACTTATTATTAT+TGG | - | chr6_1:13420246-13420265 | Msa0876040:intron | 15.0% |
| !!! | TAATTCTAAGGATTAATTTT+TGG | + | chr6_1:13420345-13420364 | None:intergenic | 15.0% |
| !! | GAGAATTTAATTCAATTTAA+AGG | + | chr6_1:13420398-13420417 | None:intergenic | 15.0% |
| !! | TAAACTTCAGTATTTATAAT+TGG | - | chr6_1:13421625-13421644 | Msa0876040:intron | 15.0% |
| !! | AAACTTCAGTATTTATAATT+GGG | - | chr6_1:13421626-13421645 | Msa0876040:intron | 15.0% |
| !! | ATCAAAAAATAGGAATATAT+TGG | + | chr6_1:13422756-13422775 | None:intergenic | 15.0% |
| !! | GTATAATTGACAAATTAAAA+AGG | - | chr6_1:13423501-13423520 | Msa0876040:CDS | 15.0% |
| !!! | ATTAGTGACTTTATTTAAAA+AGG | - | chr6_1:13425066-13425085 | Msa0876040:intron | 15.0% |
| !!! | TTAATTTTGCTTTTTGTTAT+GGG | + | chr6_1:13425376-13425395 | None:intergenic | 15.0% |
| !!! | TTTAATTTTGCTTTTTGTTA+TGG | + | chr6_1:13425377-13425396 | None:intergenic | 15.0% |
| !!! | TTTTTTTTATGATAACACTT+TGG | - | chr6_1:13425913-13425932 | Msa0876040:intron | 15.0% |
| !! | GAAAAATATTATTATCATTC+AGG | + | chr6_1:13426001-13426020 | None:intergenic | 15.0% |
| !!! | TTTTCTGAAGGAAAAAAAAT+TGG | - | chr6_1:13417067-13417086 | Msa0876040:intron | 20.0% |
| !! | ACAATAATAATCTGAGAAAA+TGG | + | chr6_1:13417617-13417636 | None:intergenic | 20.0% |
| !! | TGTAATGTAATTGTTTAATG+TGG | - | chr6_1:13417695-13417714 | Msa0876040:intron | 20.0% |
| !! | TTTGATTAATGAGCTAAAAT+TGG | - | chr6_1:13417888-13417907 | Msa0876040:intron | 20.0% |
| !!! | TCGATTTTTAACATTAACTT+GGG | + | chr6_1:13417989-13418008 | None:intergenic | 20.0% |
| !!! | TTCGATTTTTAACATTAACT+TGG | + | chr6_1:13417990-13418009 | None:intergenic | 20.0% |
| !! | TTTAATTAATTGGCTGAAAT+TGG | - | chr6_1:13418334-13418353 | Msa0876040:intron | 20.0% |
| !!! | GTTTCTTGTTTTATGATTTT+TGG | - | chr6_1:13418506-13418525 | Msa0876040:intron | 20.0% |
| !! | AAACCAAATTAAAAAAAGAG+GGG | + | chr6_1:13418870-13418889 | None:intergenic | 20.0% |
| !!! | TTTTGTGTTGAATTTAGATA+TGG | - | chr6_1:13418967-13418986 | Msa0876040:intron | 20.0% |
| !! | TTTGTGTTGAATTTAGATAT+GGG | - | chr6_1:13418968-13418987 | Msa0876040:intron | 20.0% |
| !! | AAAGATAAATTTGTGTTTGA+TGG | - | chr6_1:13419364-13419383 | Msa0876040:intron | 20.0% |
| !!! | GATTTTCATAGTTGTTTTTA+TGG | - | chr6_1:13419448-13419467 | Msa0876040:intron | 20.0% |
| !! | AAGTTAAAGGAAATATCTAA+TGG | - | chr6_1:13419605-13419624 | Msa0876040:intron | 20.0% |
| !!! | TGAATTTTCTCTTATATCTT+TGG | - | chr6_1:13420063-13420082 | Msa0876040:intron | 20.0% |
| !! | GATCAAATTAATAATAGTCA+TGG | - | chr6_1:13420276-13420295 | Msa0876040:intron | 20.0% |
| !! | TCATATTCTTCATAAGAAAT+TGG | + | chr6_1:13422010-13422029 | None:intergenic | 20.0% |
| !! | TGGAAATTAAAAAGCTATAA+TGG | - | chr6_1:13422276-13422295 | Msa0876040:intron | 20.0% |
| !! | AAAAAATAGGAATATATTGG+TGG | + | chr6_1:13422753-13422772 | None:intergenic | 20.0% |
| !! | TAAAGTGTGTATCAAAAAAT+AGG | + | chr6_1:13422766-13422785 | None:intergenic | 20.0% |
| !!! | TTCTAAAACGACATTTAAAA+AGG | - | chr6_1:13422842-13422861 | Msa0876040:intron | 20.0% |
| !!! | TTAATTTTGATTAAAGGAGT+TGG | + | chr6_1:13423107-13423126 | None:intergenic | 20.0% |
| !! | AAACTTCATGAATGTTAAAA+AGG | + | chr6_1:13423195-13423214 | None:intergenic | 20.0% |
| !! | ATTGACAAATTAAAAAGGAA+CGG | - | chr6_1:13423506-13423525 | Msa0876040:CDS | 20.0% |
| !!! | ACTTATTCGACTTTTATTTT+TGG | + | chr6_1:13423548-13423567 | None:intergenic | 20.0% |
| !! | ATTAAACGGTTTAAATAGTA+AGG | + | chr6_1:13423912-13423931 | None:intergenic | 20.0% |
| !!! | ATTCTCTATTTGGATATTTT+CGG | - | chr6_1:13424042-13424061 | Msa0876040:CDS | 20.0% |
| !! | ATTGATATTTGGATTGTAAT+TGG | + | chr6_1:13424222-13424241 | None:intergenic | 20.0% |
| !! | CAAATTCTTACATTGATATT+TGG | + | chr6_1:13424233-13424252 | None:intergenic | 20.0% |
| !! | CAAATATCAATGTAAGAATT+TGG | - | chr6_1:13424231-13424250 | Msa0876040:CDS | 20.0% |
| !!! | GATAAAGTATCATTTTCAAT+TGG | - | chr6_1:13424700-13424719 | Msa0876040:intron | 20.0% |
| !! | AGAATTACTAGATCTATTAT+CGG | + | chr6_1:13424855-13424874 | None:intergenic | 20.0% |
| !! | TAATACTTAATGAGTAAAGT+GGG | + | chr6_1:13425255-13425274 | None:intergenic | 20.0% |
| !! | TTAATACTTAATGAGTAAAG+TGG | + | chr6_1:13425256-13425275 | None:intergenic | 20.0% |
| !! | TGGTTTAAACTTAGTTATTT+CGG | - | chr6_1:13425306-13425325 | Msa0876040:intron | 20.0% |
| !!! | TTTGTTTTTTGTTTCTGAAA+TGG | - | chr6_1:13425500-13425519 | Msa0876040:intron | 20.0% |
| !! | TCTATCTGATAGTAATATTT+AGG | - | chr6_1:13425807-13425826 | Msa0876040:intron | 20.0% |
| !! | TGGAAATTAAAAAGCTATAA+TGG | - | chr6_1:13422276-13422295 | Msa0876040:intron | 20.0% |
| !! | AAATTAAAAAGCTATAATGG+TGG | - | chr6_1:13422279-13422298 | Msa0876040:intron | 20.0% |
| !!! | AGGGAATGTTTAAGTTATTT+TGG | + | chr6_1:13416433-13416452 | None:intergenic | 25.0% |
| !!! | GAAAATGAGTTTGGTTTTTT+TGG | + | chr6_1:13416474-13416493 | None:intergenic | 25.0% |
| ! | TTCTTCTCTACTAACAATAA+TGG | - | chr6_1:13416531-13416550 | Msa0876040:intron | 25.0% |
| ! | AGAAAATGAAGAATGAAAGA+AGG | + | chr6_1:13416733-13416752 | None:intergenic | 25.0% |
| !!! | TGAATTATGTCATTTTCTGA+AGG | - | chr6_1:13417055-13417074 | Msa0876040:intron | 25.0% |
| ! | ATAATGTATCAATATCGTGT+CGG | - | chr6_1:13417285-13417304 | Msa0876040:intron | 25.0% |
| ! | ATTAAACACAAATACAGACA+GGG | + | chr6_1:13417656-13417675 | None:intergenic | 25.0% |
| !! | GTTTTTGTGAATGTGATTAT+TGG | - | chr6_1:13417822-13417841 | Msa0876040:intron | 25.0% |
| ! | ACATAAATGGATGTTGTAAT+TGG | - | chr6_1:13417933-13417952 | Msa0876040:intron | 25.0% |
| !!! | CGATTTTTAACATTAACTTG+GGG | + | chr6_1:13417988-13418007 | None:intergenic | 25.0% |
| !!! | AAAATTATTTGATGGGTTGT+AGG | - | chr6_1:13418011-13418030 | Msa0876040:intron | 25.0% |
| !!! | AAATTATTTGATGGGTTGTA+GGG | - | chr6_1:13418012-13418031 | Msa0876040:intron | 25.0% |
| ! | GTAGATAATGTATTGAAACA+AGG | - | chr6_1:13418103-13418122 | Msa0876040:intron | 25.0% |
| ! | AGATATGAACTCAAAGAATA+CGG | - | chr6_1:13418184-13418203 | Msa0876040:intron | 25.0% |
| ! | TTTACTTGTGAATCTGATTA+TGG | - | chr6_1:13418309-13418328 | Msa0876040:intron | 25.0% |
| ! | TTACTTGTGAATCTGATTAT+GGG | - | chr6_1:13418310-13418329 | Msa0876040:intron | 25.0% |
| ! | GATTATGGGGTTTAATTAAT+TGG | - | chr6_1:13418324-13418343 | Msa0876040:intron | 25.0% |
| ! | AAAATGTGTACTTTGTTGAT+TGG | - | chr6_1:13418626-13418645 | Msa0876040:intron | 25.0% |
| ! | TTGTGTTGAATTTAGATATG+GGG | - | chr6_1:13418969-13418988 | Msa0876040:intron | 25.0% |
| ! | ATACACAAAATGGTACAAAA+TGG | + | chr6_1:13419120-13419139 | None:intergenic | 25.0% |
| !! | TTTTGTACCATTTTGTGTAT+TGG | - | chr6_1:13419120-13419139 | Msa0876040:intron | 25.0% |
| ! | TAACATTGTAGGAAAAAAAG+AGG | - | chr6_1:13419157-13419176 | Msa0876040:intron | 25.0% |
| ! | AAAAGAAGCTAATTTGGATA+AGG | - | chr6_1:13419303-13419322 | Msa0876040:intron | 25.0% |
| !!! | TCATGTTTGTTATATACTAC+AGG | - | chr6_1:13419478-13419497 | Msa0876040:intron | 25.0% |
| ! | TTGAAAACAAGAAATCGAAA+AGG | - | chr6_1:13419648-13419667 | Msa0876040:intron | 25.0% |
| ! | TCTGAATGCTGAAAAAATTA+AGG | - | chr6_1:13419910-13419929 | Msa0876040:intron | 25.0% |
| !! | AAACTCAAGGTCTAATATTT+TGG | + | chr6_1:13419969-13419988 | None:intergenic | 25.0% |
| ! | TAAGAGAAAATTCAGCATAA+AGG | + | chr6_1:13420057-13420076 | None:intergenic | 25.0% |
| !! | AGTTACACACAATATCTTTT+TGG | - | chr6_1:13420166-13420185 | Msa0876040:intron | 25.0% |
| !!! | TTTTCTTTTTAAGTTTTGGC+TGG | - | chr6_1:13420211-13420230 | Msa0876040:intron | 25.0% |
| !! | TTGGAATAAACTGTGATTTT+TGG | - | chr6_1:13420723-13420742 | Msa0876040:intron | 25.0% |
| ! | GTAAGTATCTCAATTTAAAC+TGG | - | chr6_1:13420959-13420978 | Msa0876040:CDS | 25.0% |
| ! | AAACAATGAAGTAACAAGAA+AGG | + | chr6_1:13420999-13421018 | None:intergenic | 25.0% |
| ! | ACATTAAACAAGATAAAGAC+AGG | + | chr6_1:13421062-13421081 | None:intergenic | 25.0% |
| !! | TGTCTTTATCTTGTTTAATG+TGG | - | chr6_1:13421061-13421080 | Msa0876040:intron | 25.0% |
| !! | TTTATCTTGTTTAATGTGGT+TGG | - | chr6_1:13421065-13421084 | Msa0876040:intron | 25.0% |
| ! | TGATGATCAAAATGCAATAT+TGG | - | chr6_1:13421127-13421146 | Msa0876040:intron | 25.0% |
| !!! | GTTTTTTTATGACAACACTT+TGG | - | chr6_1:13421583-13421602 | Msa0876040:intron | 25.0% |
| ! | GAAAGTAAATGAAATGTTGT+GGG | + | chr6_1:13421703-13421722 | None:intergenic | 25.0% |
| ! | AGAAAGTAAATGAAATGTTG+TGG | + | chr6_1:13421704-13421723 | None:intergenic | 25.0% |
| !!! | TCCAATTTGTTAAATTCAGT+TGG | - | chr6_1:13421974-13421993 | Msa0876040:intron | 25.0% |
| ! | ACCAACTGAATTTAACAAAT+TGG | + | chr6_1:13421978-13421997 | None:intergenic | 25.0% |
| ! | ATAGAGAACATGCAAATATA+TGG | - | chr6_1:13422112-13422131 | Msa0876040:CDS | 25.0% |
| !!! | TTTTTTCCTTATAACATTGC+AGG | - | chr6_1:13422189-13422208 | Msa0876040:intron | 25.0% |
| !! | TTTTTCCTTATAACATTGCA+GGG | - | chr6_1:13422190-13422209 | Msa0876040:intron | 25.0% |
| ! | AGAATTACCTTGTAACAAAA+AGG | + | chr6_1:13422310-13422329 | None:intergenic | 25.0% |
| !!! | GATGAAAAATGGTTTGTTTA+TGG | - | chr6_1:13422448-13422467 | Msa0876040:CDS | 25.0% |
| ! | TTAAAACCTTAAATTATCCC+TGG | + | chr6_1:13422589-13422608 | None:intergenic | 25.0% |
| !!! | ATCACAAAATTCTAGAACTT+GGG | + | chr6_1:13422628-13422647 | None:intergenic | 25.0% |
| !!! | TATCACAAAATTCTAGAACT+TGG | + | chr6_1:13422629-13422648 | None:intergenic | 25.0% |
| ! | AATTAGTTACAATTTGTAGC+TGG | - | chr6_1:13422683-13422702 | Msa0876040:CDS | 25.0% |
| !!! | ATATTGGTGGATTAAATTGA+GGG | + | chr6_1:13422740-13422759 | None:intergenic | 25.0% |
| !!! | TATATTGGTGGATTAAATTG+AGG | + | chr6_1:13422741-13422760 | None:intergenic | 25.0% |
| ! | AAACGACATTTAAAAAGGAA+CGG | - | chr6_1:13422847-13422866 | Msa0876040:intron | 25.0% |
| !!! | ACTTTTGATTAATGTGAAGT+TGG | + | chr6_1:13423063-13423082 | None:intergenic | 25.0% |
| !!! | GAAGCGTTAATTTTGATTAA+AGG | + | chr6_1:13423113-13423132 | None:intergenic | 25.0% |
| !!! | TATATAAGAGCATTCTTTAC+CGG | + | chr6_1:13423982-13424001 | None:intergenic | 25.0% |
| ! | AAAGAATGCTCTTATATACT+CGG | - | chr6_1:13423984-13424003 | Msa0876040:CDS | 25.0% |
| !! | AGAAAGATGTCTCAAAATTT+TGG | - | chr6_1:13424083-13424102 | Msa0876040:intron | 25.0% |
| !! | GAAAGATGTCTCAAAATTTT+GGG | - | chr6_1:13424084-13424103 | Msa0876040:intron | 25.0% |
| !!! | AATGTAAGAATTTGGAGTTT+TGG | - | chr6_1:13424239-13424258 | Msa0876040:CDS | 25.0% |
| ! | TGTAAAAATAGGAACAACAA+AGG | + | chr6_1:13424544-13424563 | None:intergenic | 25.0% |
| !!! | TTGTTGTTCCTATTTTTACA+AGG | - | chr6_1:13424544-13424563 | Msa0876040:intron | 25.0% |
| ! | GGACTCAATTTCTTAAAATA+AGG | - | chr6_1:13424618-13424637 | Msa0876040:intron | 25.0% |
| ! | TCTTTCCAATTATAGAGAAT+TGG | + | chr6_1:13424788-13424807 | None:intergenic | 25.0% |
| ! | TAATTGGAAAGAAAATAGAG+TGG | - | chr6_1:13424796-13424815 | Msa0876040:intron | 25.0% |
| ! | TAATTCTATACTGTGATACT+CGG | - | chr6_1:13424868-13424887 | Msa0876040:intron | 25.0% |
| ! | AAACAAGTAAACCATAAAAG+AGG | + | chr6_1:13424941-13424960 | None:intergenic | 25.0% |
| ! | TTGTTTGAATCTATGTTCAT+TGG | - | chr6_1:13424955-13424974 | Msa0876040:intron | 25.0% |
| ! | TTGAGAAAATAGGAAAGAAT+AGG | + | chr6_1:13425119-13425138 | None:intergenic | 25.0% |
| !! | AACACTTTTGTTGAGAAAAT+AGG | + | chr6_1:13425129-13425148 | None:intergenic | 25.0% |
| !! | ATTTTCAACTCATTATCACT+AGG | - | chr6_1:13425184-13425203 | Msa0876040:intron | 25.0% |
| !! | TTTTCATCAAGAGAATAGTT+TGG | - | chr6_1:13425286-13425305 | Msa0876040:intron | 25.0% |
| ! | GGTATTCAACAAATTTGATT+TGG | + | chr6_1:13425355-13425374 | None:intergenic | 25.0% |
| ! | ATCTGATAGTAATATTTAGG+TGG | - | chr6_1:13425810-13425829 | Msa0876040:intron | 25.0% |
| !!! | TTTTAACTTGTTTACAACCT+AGG | + | chr6_1:13425858-13425877 | None:intergenic | 25.0% |
| ! | ATGATAAAGAACTTGAATGT+TGG | - | chr6_1:13425890-13425909 | Msa0876040:intron | 25.0% |
| ! | TTGACTTCAGTAGTTATAAT+TGG | - | chr6_1:13425962-13425981 | Msa0876040:intron | 25.0% |
| ! | TGACTTCAGTAGTTATAATT+GGG | - | chr6_1:13425963-13425982 | Msa0876040:intron | 25.0% |
| ! | GAAAGTAAATGAAATGTTGT+GGG | + | chr6_1:13421703-13421722 | None:intergenic | 25.0% |
| ! | CCAACTGAATTTAAACAAAT+TGG | + | chr6_1:13426314-13426333 | None:intergenic | 25.0% |
| !! | CCAATTTGTTTAAATTCAGT+TGG | - | chr6_1:13426311-13426330 | Msa0876040:intron | 25.0% |
| ! | TACTTCATTAACATTCAAAC+TGG | - | chr6_1:13426383-13426402 | Msa0876040:intron | 25.0% |
| ! | CAAACAAATGCACTTAATTA+AGG | - | chr6_1:13426422-13426441 | Msa0876040:intron | 25.0% |
| ! | TTTGGAGTGAAAAATGTGAA+GGG | + | chr6_1:13416456-13416475 | None:intergenic | 30.0% |
| !!! | TTTTGGAGTGAAAAATGTGA+AGG | + | chr6_1:13416457-13416476 | None:intergenic | 30.0% |
| ! | AAAGAGAAAACGAGATTTTG+AGG | + | chr6_1:13416504-13416523 | None:intergenic | 30.0% |
| ! | CGAATCTATGATTCTGAAAA+CGG | - | chr6_1:13416676-13416695 | Msa0876040:CDS | 30.0% |
| ATTATAATCAGAAACCCTAG+TGG | + | chr6_1:13416768-13416787 | None:intergenic | 30.0% | |
| !! | AGATCTATATAGTTCTGACA+CGG | - | chr6_1:13416822-13416841 | Msa0876040:intron | 30.0% |
| TAGATCTGAACTCAAGAATA+CGG | + | chr6_1:13417166-13417185 | None:intergenic | 30.0% | |
| TTAAACACAAATACAGACAG+GGG | + | chr6_1:13417655-13417674 | None:intergenic | 30.0% | |
| CATTAAACACAAATACAGAC+AGG | + | chr6_1:13417657-13417676 | None:intergenic | 30.0% | |
| GTCTGTATTTGTGTTTAATG+TGG | - | chr6_1:13417657-13417676 | Msa0876040:CDS | 30.0% | |
| TTGTGAATGTGATTATTGGA+AGG | - | chr6_1:13417826-13417845 | Msa0876040:intron | 30.0% | |
| TACTTGTGAATCTGATTATG+GGG | - | chr6_1:13418311-13418330 | Msa0876040:intron | 30.0% | |
| GCAATAATGGTTGTTGTAAT+TGG | - | chr6_1:13418379-13418398 | Msa0876040:intron | 30.0% | |
| ATAATGTCTGAAGGTTTACT+CGG | - | chr6_1:13418480-13418499 | Msa0876040:intron | 30.0% | |
| !!! | GTTTGTTTTATTCTGAGATG+TGG | - | chr6_1:13418534-13418553 | Msa0876040:intron | 30.0% |
| ! | ACTGGTCTATGACTTATTAT+GGG | - | chr6_1:13418585-13418604 | Msa0876040:intron | 30.0% |
| ! | AAATGTGTTAGCTTCAAAAC+TGG | + | chr6_1:13418716-13418735 | None:intergenic | 30.0% |
| AGCTAACACATTTGTTTACT+TGG | - | chr6_1:13418723-13418742 | Msa0876040:intron | 30.0% | |
| !!! | GTTCCCCTCTTTTTTTAATT+TGG | - | chr6_1:13418864-13418883 | Msa0876040:intron | 30.0% |
| TGAATTTAGATATGGGGAAA+AGG | - | chr6_1:13418975-13418994 | Msa0876040:intron | 30.0% | |
| AGGTAGATCTATTGAATGAT+TGG | - | chr6_1:13419004-13419023 | Msa0876040:intron | 30.0% | |
| TTCAGAACCAATACACAAAA+TGG | + | chr6_1:13419130-13419149 | None:intergenic | 30.0% | |
| TGAAAGAAGAGTAACATTGT+AGG | - | chr6_1:13419146-13419165 | Msa0876040:intron | 30.0% | |
| TACTGGTATACTAGTTCATT+CGG | - | chr6_1:13419189-13419208 | Msa0876040:intron | 30.0% | |
| !! | TCCAAATTAGCTTCTTTTGA+AGG | + | chr6_1:13419301-13419320 | None:intergenic | 30.0% |
| TTGTGTCAACTACAGAAAAA+TGG | + | chr6_1:13419345-13419364 | None:intergenic | 30.0% | |
| ! | TTTCAATTGCATTGATGAAG+AGG | + | chr6_1:13419401-13419420 | None:intergenic | 30.0% |
| AACTCATTATGTGGAAACAA+AGG | - | chr6_1:13419539-13419558 | Msa0876040:intron | 30.0% | |
| ATGTGGAAACAAAGGTTTAA+AGG | - | chr6_1:13419547-13419566 | Msa0876040:intron | 30.0% | |
| AGAAAACAGAGAAAATGAAG+CGG | - | chr6_1:13419579-13419598 | Msa0876040:intron | 30.0% | |
| ! | ATTTCTTTTCACATCACCAT+CGG | + | chr6_1:13419696-13419715 | None:intergenic | 30.0% |
| ATGCATTAGATTAGGAATGA+AGG | + | chr6_1:13419813-13419832 | None:intergenic | 30.0% | |
| TTTCTCTCATGCATTAGATT+AGG | + | chr6_1:13419821-13419840 | None:intergenic | 30.0% | |
| ! | TATAGCATTTGTTTGAGACT+TGG | + | chr6_1:13419888-13419907 | None:intergenic | 30.0% |
| GTAACTAACAATAGCGTTTA+AGG | + | chr6_1:13420152-13420171 | None:intergenic | 30.0% | |
| AATAGTCATGGCAAGAAATT+TGG | - | chr6_1:13420288-13420307 | Msa0876040:intron | 30.0% | |
| CCTATTGCAAAGTAATTCTA+AGG | + | chr6_1:13420357-13420376 | None:intergenic | 30.0% | |
| CCTTAGAATTACTTTGCAAT+AGG | - | chr6_1:13420354-13420373 | Msa0876040:intron | 30.0% | |
| CTTGACATAGCAATTATGAA+CGG | + | chr6_1:13420452-13420471 | None:intergenic | 30.0% | |
| ATTTGTTCCCATGTATAATC+AGG | - | chr6_1:13420481-13420500 | Msa0876040:intron | 30.0% | |
| !! | TTTCATTTTTAAAGGGTGAG+AGG | - | chr6_1:13420679-13420698 | Msa0876040:intron | 30.0% |
| !! | TTCATTTTTAAAGGGTGAGA+GGG | - | chr6_1:13420680-13420699 | Msa0876040:intron | 30.0% |
| AAATTCATGGTTGAAAGTTC+TGG | - | chr6_1:13420791-13420810 | Msa0876040:CDS | 30.0% | |
| ! | CATTAGCGGATATAATGATT+TGG | - | chr6_1:13420878-13420897 | Msa0876040:intron | 30.0% |
| TTTATCTGTGATGAAGCTTT+GGG | - | chr6_1:13420930-13420949 | Msa0876040:intron | 30.0% | |
| GATACTTGCTTTATATCTTC+AGG | - | chr6_1:13421087-13421106 | Msa0876040:intron | 30.0% | |
| TTTATATCTTCAGGAAGCTA+AGG | - | chr6_1:13421096-13421115 | Msa0876040:intron | 30.0% | |
| AATGAAAGCAGCAAAATCTA+AGG | - | chr6_1:13421157-13421176 | Msa0876040:intron | 30.0% | |
| CAAAAGCTGCTATATCAAAT+GGG | - | chr6_1:13421334-13421353 | Msa0876040:intron | 30.0% | |
| !! | CATCATATTCTGAAATTGAG+AGG | + | chr6_1:13421365-13421384 | None:intergenic | 30.0% |
| AAACATCAGAACATACGTTT+AGG | + | chr6_1:13421459-13421478 | None:intergenic | 30.0% | |
| ACTCCATGCATAAATTTCTT+AGG | - | chr6_1:13421509-13421528 | Msa0876040:intron | 30.0% | |
| !! | GTAGTTTATAAGAGTACCTA+AGG | - | chr6_1:13421541-13421560 | Msa0876040:intron | 30.0% |
| ! | CATTCAAGTTCTTTAACCTT+AGG | + | chr6_1:13421560-13421579 | None:intergenic | 30.0% |
| AGGTTAAAGAACTTGAATGT+TGG | - | chr6_1:13421561-13421580 | Msa0876040:intron | 30.0% | |
| TCAACCAGTTGTATTGTTAA+TGG | - | chr6_1:13421886-13421905 | Msa0876040:CDS | 30.0% | |
| TACTTCTTTAACATCCAAAC+TGG | - | chr6_1:13422046-13422065 | Msa0876040:intron | 30.0% | |
| TTACCAAATAAAGTCCAGTT+TGG | + | chr6_1:13422063-13422082 | None:intergenic | 30.0% | |
| CTTAATCAAGTGCATTTGTT+TGG | + | chr6_1:13422087-13422106 | None:intergenic | 30.0% | |
| CAAACAAATGCACTTGATTA+AGG | - | chr6_1:13422085-13422104 | Msa0876040:CDS | 30.0% | |
| ! | GAATATGCCTTTTTGTTACA+AGG | - | chr6_1:13422300-13422319 | Msa0876040:CDS | 30.0% |
| GAATGACACCATTAAGATTT+AGG | - | chr6_1:13422355-13422374 | Msa0876040:CDS | 30.0% | |
| TGCTATAGCCTAAATCTTAA+TGG | + | chr6_1:13422366-13422385 | None:intergenic | 30.0% | |
| !! | GTGTTGAAGTTGATGAAAAA+TGG | - | chr6_1:13422437-13422456 | Msa0876040:CDS | 30.0% |
| AACTAAACTGAAGTCATCTT+TGG | + | chr6_1:13422529-13422548 | None:intergenic | 30.0% | |
| GCAGATTACTAGTATGTAAT+TGG | + | chr6_1:13422567-13422586 | None:intergenic | 30.0% | |
| TGATAAAGACAAGAATCCTT+AGG | - | chr6_1:13422644-13422663 | Msa0876040:CDS | 30.0% | |
| ! | GCATTGAAATTTGAAACCTA+AGG | + | chr6_1:13422663-13422682 | None:intergenic | 30.0% |
| ACACACTTTATCTTTCCAAT+AGG | - | chr6_1:13422776-13422795 | Msa0876040:intron | 30.0% | |
| ! | TTTGCACATTTTCTTCCTAT+TGG | + | chr6_1:13422794-13422813 | None:intergenic | 30.0% |
| !!! | ATTTTGATTAAAGGAGTTGG+AGG | + | chr6_1:13423104-13423123 | None:intergenic | 30.0% |
| CAAAATTAACGCTTCAACTA+TGG | - | chr6_1:13423118-13423137 | Msa0876040:intron | 30.0% | |
| ACAAATTAAAAAGGAACGGA+GGG | - | chr6_1:13423510-13423529 | Msa0876040:CDS | 30.0% | |
| ! | TATTTAGGTTTCATCCTCAA+CGG | - | chr6_1:13423609-13423628 | Msa0876040:CDS | 30.0% |
| ATTGAGGTGTAATTTCACAA+AGG | + | chr6_1:13423790-13423809 | None:intergenic | 30.0% | |
| !!! | ATGACGGGTTTTGAATTAAA+CGG | + | chr6_1:13423926-13423945 | None:intergenic | 30.0% |
| !!! | AATGGATTGATTCTTTTGAC+TGG | - | chr6_1:13424014-13424033 | Msa0876040:CDS | 30.0% |
| ! | TATTTGGATATTTTCGGCTA+TGG | - | chr6_1:13424048-13424067 | Msa0876040:CDS | 30.0% |
| !!! | ATTTTGAGACATCTTTCTTG+TGG | + | chr6_1:13424081-13424100 | None:intergenic | 30.0% |
| TACTGACACTTATAAGATAG+TGG | - | chr6_1:13424193-13424212 | Msa0876040:CDS | 30.0% | |
| ATTTGAGTAGCACTCTTAAT+TGG | - | chr6_1:13424351-13424370 | Msa0876040:intron | 30.0% | |
| TGTTATTGTTTCACTCGATT+TGG | - | chr6_1:13424430-13424449 | Msa0876040:CDS | 30.0% | |
| GTTATTGTTTCACTCGATTT+GGG | - | chr6_1:13424431-13424450 | Msa0876040:CDS | 30.0% | |
| ! | ATCGGTTTCCTTGTAAAAAT+AGG | + | chr6_1:13424555-13424574 | None:intergenic | 30.0% |
| !! | AGGAAACCGATTTTCTTATA+TGG | - | chr6_1:13424564-13424583 | Msa0876040:intron | 30.0% |
| CATCTGCCATATAAGAAAAT+CGG | + | chr6_1:13424573-13424592 | None:intergenic | 30.0% | |
| ! | TTTTCTTATATGGCAGATGA+AGG | - | chr6_1:13424574-13424593 | Msa0876040:intron | 30.0% |
| AATTAGGGAATGATGAATCT+TGG | - | chr6_1:13424597-13424616 | Msa0876040:intron | 30.0% | |
| AATGATACTTTATCTCGTCA+TGG | + | chr6_1:13424694-13424713 | None:intergenic | 30.0% | |
| CCAATTATAGAGAATTGGAT+GGG | + | chr6_1:13424783-13424802 | None:intergenic | 30.0% | |
| TCCAATTATAGAGAATTGGA+TGG | + | chr6_1:13424784-13424803 | None:intergenic | 30.0% | |
| TTATCACTAGGTACTTCTTT+AGG | - | chr6_1:13425196-13425215 | Msa0876040:intron | 30.0% | |
| CAAAAGCTGCTATATCAAAT+GGG | - | chr6_1:13421334-13421353 | Msa0876040:intron | 30.0% | |
| !! | CATCATATTCTGAAATTGAG+AGG | + | chr6_1:13421365-13421384 | None:intergenic | 30.0% |
| AAACATCAGAACATACGTTT+AGG | + | chr6_1:13421459-13421478 | None:intergenic | 30.0% | |
| !! | TGTAGTTTATAAGAGTACCT+AGG | - | chr6_1:13421540-13421559 | Msa0876040:intron | 30.0% |
| TTATGATAACACTTTGGCTA+AGG | - | chr6_1:13425919-13425938 | Msa0876040:intron | 30.0% | |
| GGAAAGTAAATGAAATGTTG+TGG | + | chr6_1:13426041-13426060 | None:intergenic | 30.0% | |
| TAGCATTAACATAAGCTACA+TGG | + | chr6_1:13426134-13426153 | None:intergenic | 30.0% | |
| !!! | TTGCTATTTTAGTGGAACTT+TGG | - | chr6_1:13426178-13426197 | Msa0876040:intron | 30.0% |
| TTAGTGGAACTTTGGATTTA+TGG | - | chr6_1:13426186-13426205 | Msa0876040:intron | 30.0% | |
| CATTCAAACTGGACTTTATT+TGG | - | chr6_1:13426394-13426413 | Msa0876040:intron | 30.0% | |
| ATAGAGAACATGCGAATATA+TGG | - | chr6_1:13426449-13426468 | Msa0876040:intron | 30.0% | |
| TCAATGTTCTGCTATTACAA+TGG | - | chr6_1:13426495-13426514 | Msa0876040:intron | 30.0% | |
| GAATATACCTTTCTGTTACA+AGG | - | chr6_1:13426641-13426660 | Msa0876040:CDS | 30.0% | |
| AGAATTACCTTGTAACAGAA+AGG | + | chr6_1:13426651-13426670 | None:intergenic | 30.0% | |
| !! | GATGAAAAGTGGTTTGTTTA+TGG | - | chr6_1:13426789-13426808 | Msa0876040:five_prime_UTR | 30.0% |
| ACTAAAACTGAAAGAGAGTG+AGG | - | chr6_1:13416573-13416592 | Msa0876040:intron | 35.0% | |
| ! | GTTGTTATTGTTGATGCGAA+TGG | - | chr6_1:13416598-13416617 | Msa0876040:CDS | 35.0% |
| AAGGTTAGAAATGAAGAACC+TGG | + | chr6_1:13416714-13416733 | None:intergenic | 35.0% | |
| ! | TCTGATTTGATTCAACCACT+AGG | - | chr6_1:13416750-13416769 | Msa0876040:intron | 35.0% |
| ! | CTGATTTGATTCAACCACTA+GGG | - | chr6_1:13416751-13416770 | Msa0876040:intron | 35.0% |
| AGTTGTCTTAGTTTCGTGTT+CGG | - | chr6_1:13416876-13416895 | Msa0876040:intron | 35.0% | |
| TAGACTGTTGTAGTAGTTGT+AGG | - | chr6_1:13417128-13417147 | Msa0876040:intron | 35.0% | |
| TGTTTGAGTCTATGCTTCAT+AGG | + | chr6_1:13417202-13417221 | None:intergenic | 35.0% | |
| ATGAAGCATAGACTCAAACA+TGG | - | chr6_1:13417202-13417221 | Msa0876040:intron | 35.0% | |
| ! | CATATGTGTTGATGTCAAGT+CGG | - | chr6_1:13417480-13417499 | Msa0876040:intron | 35.0% |
| ACACAATACATATTCGACAC+CGG | - | chr6_1:13417509-13417528 | Msa0876040:intron | 35.0% | |
| TCTTGTGTTGTCGACATAAA+TGG | - | chr6_1:13417920-13417939 | Msa0876040:intron | 35.0% | |
| ! | TTGTAGGGTGATGATTTTGA+AGG | - | chr6_1:13418027-13418046 | Msa0876040:intron | 35.0% |
| ! | TGTAGTGTGATAATGTCTGA+AGG | - | chr6_1:13418471-13418490 | Msa0876040:intron | 35.0% |
| ! | CACTGGTCTATGACTTATTA+TGG | - | chr6_1:13418584-13418603 | Msa0876040:intron | 35.0% |
| CTGGTCTATGACTTATTATG+GGG | - | chr6_1:13418586-13418605 | Msa0876040:intron | 35.0% | |
| TATGACTTATTATGGGGCAT+TGG | - | chr6_1:13418592-13418611 | Msa0876040:intron | 35.0% | |
| ! | ATGACTTATTATGGGGCATT+GGG | - | chr6_1:13418593-13418612 | Msa0876040:intron | 35.0% |
| ! | GTACTTTGTTGATTGGTTGT+AGG | - | chr6_1:13418633-13418652 | Msa0876040:intron | 35.0% |
| !! | TGTAGGATGATGATGTTTTG+AGG | - | chr6_1:13418650-13418669 | Msa0876040:intron | 35.0% |
| TTTGTAAGAATCCAAGAGGT+GGG | - | chr6_1:13418792-13418811 | Msa0876040:intron | 35.0% | |
| ATTTAGATATGGGGAAAAGG+CGG | - | chr6_1:13418978-13418997 | Msa0876040:intron | 35.0% | |
| GAATGAACTAGTATACCAGT+AGG | + | chr6_1:13419190-13419209 | None:intergenic | 35.0% | |
| GCCTTCAAAAGAAGCTAATT+TGG | - | chr6_1:13419297-13419316 | Msa0876040:intron | 35.0% | |
| ! | CATAATGAGTTTTCCTTCTC+AGG | + | chr6_1:13419530-13419549 | None:intergenic | 35.0% |
| GAGAAGGAAAACTCATTATG+TGG | - | chr6_1:13419530-13419549 | Msa0876040:intron | 35.0% | |
| GAAAACAGAGAAAATGAAGC+GGG | - | chr6_1:13419580-13419599 | Msa0876040:intron | 35.0% | |
| AATGAAGCGGGAAAAGTTAA+AGG | - | chr6_1:13419592-13419611 | Msa0876040:intron | 35.0% | |
| AAAAGGCCTAAACTTTCCAA+CGG | - | chr6_1:13419665-13419684 | Msa0876040:intron | 35.0% | |
| AAGAAATGCAGATGCTGATA+CGG | - | chr6_1:13419709-13419728 | Msa0876040:intron | 35.0% | |
| ! | TTAGAATTCTGCAGAGTGTT+TGG | - | chr6_1:13420022-13420041 | Msa0876040:intron | 35.0% |
| !!! | TAAGTTTTGGCTGGTTTAGT+TGG | - | chr6_1:13420220-13420239 | Msa0876040:intron | 35.0% |
| !!! | AAGTTTTGGCTGGTTTAGTT+GGG | - | chr6_1:13420221-13420240 | Msa0876040:intron | 35.0% |
| TCAAAGTCAACAGCTTGATT+TGG | + | chr6_1:13420604-13420623 | None:intergenic | 35.0% | |
| !! | CTGTGATTTTTGGATCACTT+TGG | - | chr6_1:13420733-13420752 | Msa0876040:intron | 35.0% |
| !! | TTTTTGGATCACTTTGGTGT+AGG | - | chr6_1:13420739-13420758 | Msa0876040:intron | 35.0% |
| CTGGCAATGGAAAAAATTCA+TGG | - | chr6_1:13420778-13420797 | Msa0876040:CDS | 35.0% | |
| GAGGATTTGATTACTGAATC+TGG | - | chr6_1:13420813-13420832 | Msa0876040:CDS | 35.0% | |
| ! | TGCTGCACTAAAAGATTTTC+CGG | - | chr6_1:13420836-13420855 | Msa0876040:intron | 35.0% |
| CATCACAGATAAAGTTCAGA+AGG | + | chr6_1:13420923-13420942 | None:intergenic | 35.0% | |
| CTTTATCTGTGATGAAGCTT+TGG | - | chr6_1:13420929-13420948 | Msa0876040:intron | 35.0% | |
| GGAAAAGGTAAGATGATACA+AGG | - | chr6_1:13421193-13421212 | Msa0876040:intron | 35.0% | |
| AAAGGTAAGATGATACAAGG+TGG | - | chr6_1:13421196-13421215 | Msa0876040:intron | 35.0% | |
| GTTGTGTACATGTTATCTAC+AGG | - | chr6_1:13421275-13421294 | Msa0876040:intron | 35.0% | |
| AAGTCTTAAGCAAAAGTTGC+AGG | - | chr6_1:13421302-13421321 | Msa0876040:intron | 35.0% | |
| GCAAAAGCTGCTATATCAAA+TGG | - | chr6_1:13421333-13421352 | Msa0876040:intron | 35.0% | |
| CCACCTAAGAAATTTATGCA+TGG | + | chr6_1:13421515-13421534 | None:intergenic | 35.0% | |
| CCATGCATAAATTTCTTAGG+TGG | - | chr6_1:13421512-13421531 | Msa0876040:intron | 35.0% | |
| TTATGACAACACTTTGGCTA+AGG | - | chr6_1:13421589-13421608 | Msa0876040:intron | 35.0% | |
| ACACTTTGGCTAAGGTATAT+AGG | - | chr6_1:13421597-13421616 | Msa0876040:intron | 35.0% | |
| TGGATTCAACACTTCATTCA+AGG | + | chr6_1:13421778-13421797 | None:intergenic | 35.0% | |
| !! | AATGAAGTGTTGAATCCATG+TGG | - | chr6_1:13421780-13421799 | Msa0876040:intron | 35.0% |
| TAACATTAACATGAGCCACA+TGG | + | chr6_1:13421798-13421817 | None:intergenic | 35.0% | |
| ATGCTATTACAGGAGAACTT+TGG | - | chr6_1:13421842-13421861 | Msa0876040:CDS | 35.0% | |
| GCAACCATTAACAATACAAC+TGG | + | chr6_1:13421893-13421912 | None:intergenic | 35.0% | |
| CATCCAAACTGGACTTTATT+TGG | - | chr6_1:13422057-13422076 | Msa0876040:CDS | 35.0% | |
| TCAATGTTCTGCTATTGCAA+TGG | - | chr6_1:13422157-13422176 | Msa0876040:intron | 35.0% | |
| ATAATAGCGGTAATGCATTC+TGG | - | chr6_1:13422256-13422275 | Msa0876040:intron | 35.0% | |
| TCACTAAGTACATTTCCTCT+AGG | - | chr6_1:13422491-13422510 | Msa0876040:intron | 35.0% | |
| TTACATACTAGTAATCTGCC+AGG | - | chr6_1:13422568-13422587 | Msa0876040:intron | 35.0% | |
| TACATACTAGTAATCTGCCA+GGG | - | chr6_1:13422569-13422588 | Msa0876040:intron | 35.0% | |
| AATCTGCCAGGGATAATTTA+AGG | - | chr6_1:13422580-13422599 | Msa0876040:intron | 35.0% | |
| GACATTTAAAAAGGAACGGA+GGG | - | chr6_1:13422851-13422870 | Msa0876040:intron | 35.0% | |
| AGAAAGAGTAGAAGACTTGT+TGG | + | chr6_1:13423171-13423190 | None:intergenic | 35.0% | |
| AAAGATACGAGTAAGTGACA+AGG | - | chr6_1:13423478-13423497 | Msa0876040:CDS | 35.0% | |
| AAGATACGAGTAAGTGACAA+GGG | - | chr6_1:13423479-13423498 | Msa0876040:CDS | 35.0% | |
| GACAAATTAAAAAGGAACGG+AGG | - | chr6_1:13423509-13423528 | Msa0876040:CDS | 35.0% | |
| AAAGTCGAATAAGTTAGCTG+AGG | - | chr6_1:13423554-13423573 | Msa0876040:CDS | 35.0% | |
| GAATAAGTTAGCTGAGGATT+AGG | - | chr6_1:13423560-13423579 | Msa0876040:CDS | 35.0% | |
| GTTGAGGATGAAACCTAAAT+AGG | + | chr6_1:13423610-13423629 | None:intergenic | 35.0% | |
| AATCGAACAAGAGATTTCAC+GGG | + | chr6_1:13423723-13423742 | None:intergenic | 35.0% | |
| GAATCGAACAAGAGATTTCA+CGG | + | chr6_1:13423724-13423743 | None:intergenic | 35.0% | |
| TCGATTCAAATGTGTTAGCA+AGG | - | chr6_1:13423737-13423756 | Msa0876040:intron | 35.0% | |
| ! | ATCATCGGTGAATTGGATTT+TGG | - | chr6_1:13423873-13423892 | Msa0876040:intron | 35.0% |
| CAAAAGAATCAATCCATTGC+AGG | + | chr6_1:13424012-13424031 | None:intergenic | 35.0% | |
| ATGTTGTAATGGCCAAGAAA+CGG | + | chr6_1:13424152-13424171 | None:intergenic | 35.0% | |
| AGTAGAGTTATCAAAGCCAA+AGG | + | chr6_1:13424177-13424196 | None:intergenic | 35.0% | |
| !!! | GGAGTTTTGGAGATTATGAT+TGG | - | chr6_1:13424252-13424271 | Msa0876040:CDS | 35.0% |
| ACGAATAAACAGGAACAACA+GGG | + | chr6_1:13424295-13424314 | None:intergenic | 35.0% | |
| TACGAATAAACAGGAACAAC+AGG | + | chr6_1:13424296-13424315 | None:intergenic | 35.0% | |
| GTTCCTGTTTATTCGTACTT+TGG | - | chr6_1:13424299-13424318 | Msa0876040:intron | 35.0% | |
| TCACCAAAGTACGAATAAAC+AGG | + | chr6_1:13424305-13424324 | None:intergenic | 35.0% | |
| GTACTTTGGTGAAAATGATG+TGG | - | chr6_1:13424313-13424332 | Msa0876040:intron | 35.0% | |
| ATATGGCAGATGAAGGAATT+AGG | - | chr6_1:13424581-13424600 | Msa0876040:intron | 35.0% | |
| TATGGCAGATGAAGGAATTA+GGG | - | chr6_1:13424582-13424601 | Msa0876040:intron | 35.0% | |
| CCCATCCAATTCTCTATAAT+TGG | - | chr6_1:13424780-13424799 | Msa0876040:intron | 35.0% | |
| TAAGCTTTCAACGTAAACCT+TGG | + | chr6_1:13424894-13424913 | None:intergenic | 35.0% | |
| !! | GAGAGTATGTTCCTCTTTTA+TGG | - | chr6_1:13424927-13424946 | Msa0876040:intron | 35.0% |
| ATTTAAAAAGGCGAAACCCT+TGG | - | chr6_1:13425078-13425097 | Msa0876040:intron | 35.0% | |
| AAGCAAACTTCTTAATGTGG+TGG | + | chr6_1:13425222-13425241 | None:intergenic | 35.0% | |
| AGCAAGCAAACTTCTTAATG+TGG | + | chr6_1:13425225-13425244 | None:intergenic | 35.0% | |
| ATCTCACATTCTCAAGCAAA+AGG | - | chr6_1:13425426-13425445 | Msa0876040:intron | 35.0% | |
| GTTGTGTACATGTTATCTAC+AGG | - | chr6_1:13421275-13421294 | Msa0876040:intron | 35.0% | |
| AAGTCTTAAGCAAAAGTTGC+AGG | - | chr6_1:13421302-13421321 | Msa0876040:intron | 35.0% | |
| GCAAAAGCTGCTATATCAAA+TGG | - | chr6_1:13421333-13421352 | Msa0876040:intron | 35.0% | |
| ! | AACACTTTGGCTAAGGTATT+AGG | - | chr6_1:13425926-13425945 | Msa0876040:intron | 35.0% |
| ATAGACAGGAAGAAAGATGT+TGG | + | chr6_1:13426062-13426081 | None:intergenic | 35.0% | |
| AGATGCTAATGAACCTTGAA+TGG | - | chr6_1:13421762-13421781 | Msa0876040:intron | 35.0% | |
| GTAGCTTATGTTAATGCTAG+CGG | - | chr6_1:13426135-13426154 | Msa0876040:intron | 35.0% | |
| TAGCTTATGTTAATGCTAGC+GGG | - | chr6_1:13426136-13426155 | Msa0876040:intron | 35.0% | |
| !!! | TGTGACACTTGCTATTTTAG+TGG | - | chr6_1:13426170-13426189 | Msa0876040:intron | 35.0% |
| ATAATAGCGGTAATGCATTC+TGG | - | chr6_1:13422256-13422275 | Msa0876040:intron | 35.0% | |
| !! | TCAATGGTGTCATTCACAAA+AGG | + | chr6_1:13426691-13426710 | None:intergenic | 35.0% |
| GAATGACACCATTGAGATTT+AGG | - | chr6_1:13426696-13426715 | Msa0876040:exon | 35.0% | |
| TGCTAGATCCTAAATCTCAA+TGG | + | chr6_1:13426707-13426726 | None:intergenic | 35.0% | |
| !! | CTGTTGAAGTTGATGAAAAG+TGG | - | chr6_1:13426778-13426797 | Msa0876040:five_prime_UTR | 35.0% |
| !! | AAAGTGGTTTGTTTATGGAG+AGG | - | chr6_1:13426794-13426813 | Msa0876040:five_prime_UTR | 35.0% |
| TCACTAAGTACATTTCCTCT+AGG | - | chr6_1:13422491-13422510 | Msa0876040:intron | 35.0% | |
| GAGTGAAAAATGTGAAGGGA+GGG | + | chr6_1:13416452-13416471 | None:intergenic | 40.0% | |
| GGAATTCGCGAAAATGAGTT+TGG | + | chr6_1:13416483-13416502 | None:intergenic | 40.0% | |
| ATGTCAGACACAACACATGT+CGG | + | chr6_1:13417017-13417036 | None:intergenic | 40.0% | |
| TACAACAGTCTATGAAGCAC+CGG | + | chr6_1:13417120-13417139 | None:intergenic | 40.0% | |
| ATAGACTCAAACATGGACAC+TGG | - | chr6_1:13417209-13417228 | Msa0876040:intron | 40.0% | |
| ACACGATACATATCTGTCAC+TGG | - | chr6_1:13417314-13417333 | Msa0876040:intron | 40.0% | |
| CACGATACATATCTGTCACT+GGG | - | chr6_1:13417315-13417334 | Msa0876040:intron | 40.0% | |
| GATTAAGCATGTCATGGTCT+CGG | + | chr6_1:13417354-13417373 | None:intergenic | 40.0% | |
| !! | TATGCTATGAAGCACTGACA+CGG | - | chr6_1:13417424-13417443 | Msa0876040:intron | 40.0% |
| CACAATACATATTCGACACC+GGG | - | chr6_1:13417510-13417529 | Msa0876040:intron | 40.0% | |
| TCATAAGATTATGCGTGTCC+CGG | + | chr6_1:13417531-13417550 | None:intergenic | 40.0% | |
| TGACACAACATTGACACATG+TGG | - | chr6_1:13417576-13417595 | Msa0876040:CDS | 40.0% | |
| GATGTTGCTACTACTTAGCA+TGG | - | chr6_1:13417773-13417792 | Msa0876040:intron | 40.0% | |
| CAGTGTGTTGTCAGCAATAA+TGG | - | chr6_1:13418366-13418385 | Msa0876040:intron | 40.0% | |
| !! | TTCTGAGATGTGGTGATTTC+TGG | - | chr6_1:13418544-13418563 | Msa0876040:intron | 40.0% |
| !! | TGACTAGCTTGAAACTGTGT+TGG | - | chr6_1:13418680-13418699 | Msa0876040:intron | 40.0% |
| ! | GGTTTTCCACATTGAAGTGT+CGG | - | chr6_1:13418744-13418763 | Msa0876040:intron | 40.0% |
| ! | TTTTTGCCGACACTTCAATG+TGG | + | chr6_1:13418753-13418772 | None:intergenic | 40.0% |
| !! | GAAGTGTCGGCAAAAAACAA+TGG | - | chr6_1:13418757-13418776 | Msa0876040:intron | 40.0% |
| GCTGTTTGTAAGAATCCAAG+AGG | - | chr6_1:13418788-13418807 | Msa0876040:intron | 40.0% | |
| GTTTGTAAGAATCCAAGAGG+TGG | - | chr6_1:13418791-13418810 | Msa0876040:intron | 40.0% | |
| AAATGCCTCTTGAACAGGTT+TGG | - | chr6_1:13418842-13418861 | Msa0876040:intron | 40.0% | |
| TGGAATTGTCCAAAGTGCAA+AGG | - | chr6_1:13419024-13419043 | Msa0876040:intron | 40.0% | |
| TTGCAGATTCCTTTGCACTT+TGG | + | chr6_1:13419036-13419055 | None:intergenic | 40.0% | |
| CAGTCTTTGCATGTAAGTTG+TGG | - | chr6_1:13419059-13419078 | Msa0876040:intron | 40.0% | |
| AAAAGAGGTCATCAACCTAC+TGG | - | chr6_1:13419172-13419191 | Msa0876040:intron | 40.0% | |
| TATACTAGTTCATTCGGCCA+AGG | - | chr6_1:13419195-13419214 | Msa0876040:intron | 40.0% | |
| AGAGTTAAAACCAGATGCCT+TGG | + | chr6_1:13419215-13419234 | None:intergenic | 40.0% | |
| CAAATCTTCAGAAGCCTTCT+TGG | + | chr6_1:13419254-13419273 | None:intergenic | 40.0% | |
| ! | CAAGAAGGCTTCTGAAGATT+TGG | - | chr6_1:13419252-13419271 | Msa0876040:intron | 40.0% |
| TATACTACAGGAGCTTGTAG+TGG | - | chr6_1:13419490-13419509 | Msa0876040:intron | 40.0% | |
| GAAACTCCGTTGGAAAGTTT+AGG | + | chr6_1:13419674-13419693 | None:intergenic | 40.0% | |
| ACAAAAGTAGAGCAGAGTCA+TGG | - | chr6_1:13419734-13419753 | Msa0876040:intron | 40.0% | |
| TCATTTGCAGAACAAGCCTT+AGG | + | chr6_1:13419785-13419804 | None:intergenic | 40.0% | |
| ATGCATGAGAGAAATTGCCA+AGG | - | chr6_1:13419827-13419846 | Msa0876040:intron | 40.0% | |
| ! | ATAGCTGATGGTGAAAATGC+TGG | - | chr6_1:13419860-13419879 | Msa0876040:intron | 40.0% |
| AATGCATTCCCAACATCTTC+GGG | + | chr6_1:13419995-13420014 | None:intergenic | 40.0% | |
| CAATGCATTCCCAACATCTT+CGG | + | chr6_1:13419996-13420015 | None:intergenic | 40.0% | |
| ! | ATTCTGCAGAGTGTTTGGAA+AGG | - | chr6_1:13420027-13420046 | Msa0876040:intron | 40.0% |
| CTACTAGATGCAGCAGTAAA+AGG | + | chr6_1:13420096-13420115 | None:intergenic | 40.0% | |
| !!! | AGTTTTGGCTGGTTTAGTTG+GGG | - | chr6_1:13420222-13420241 | Msa0876040:intron | 40.0% |
| TCGAGAGCCTGATTATACAT+GGG | + | chr6_1:13420491-13420510 | None:intergenic | 40.0% | |
| ATCGAGAGCCTGATTATACA+TGG | + | chr6_1:13420492-13420511 | None:intergenic | 40.0% | |
| GATCTTAAGAAAGGAGAAGC+AGG | - | chr6_1:13420509-13420528 | Msa0876040:intron | 40.0% | |
| ! | TTTTCCATTGCCAGCAGTTA+AGG | + | chr6_1:13420772-13420791 | None:intergenic | 40.0% |
| ! | TTCATGGTTGAAAGTTCTGG+AGG | - | chr6_1:13420794-13420813 | Msa0876040:CDS | 40.0% |
| ! | TGCACTAAAAGATTTTCCGG+CGG | - | chr6_1:13420839-13420858 | Msa0876040:intron | 40.0% |
| ! | TAAAAGATTTTCCGGCGGAT+TGG | - | chr6_1:13420844-13420863 | Msa0876040:intron | 40.0% |
| !! | TGGCTCAATAAAGGCATTAG+CGG | - | chr6_1:13420864-13420883 | Msa0876040:intron | 40.0% |
| TGCTATTCCAAACTGTCACA+TGG | - | chr6_1:13421242-13421261 | Msa0876040:intron | 40.0% | |
| ATGAACACCATGTGACAGTT+TGG | + | chr6_1:13421252-13421271 | None:intergenic | 40.0% | |
| AATGAGTTGCTTGAGGCAAA+AGG | - | chr6_1:13421426-13421445 | Msa0876040:intron | 40.0% | |
| TCAACTCAGTGCAGATAGTA+GGG | + | chr6_1:13421740-13421759 | None:intergenic | 40.0% | |
| GTGGCTCATGTTAATGTTAG+CGG | - | chr6_1:13421799-13421818 | Msa0876040:CDS | 40.0% | |
| TGGCTCATGTTAATGTTAGC+GGG | - | chr6_1:13421800-13421819 | Msa0876040:CDS | 40.0% | |
| ! | AATGTTAGCGGGTATAGTAC+TGG | - | chr6_1:13421811-13421830 | Msa0876040:CDS | 40.0% |
| ACAGGAGAACTTTGGATTCA+TGG | - | chr6_1:13421850-13421869 | Msa0876040:CDS | 40.0% | |
| TGGTTCCCTGCAATGTTATA+AGG | + | chr6_1:13422198-13422217 | None:intergenic | 40.0% | |
| GAGAATTGAACCTGAGTACT+TGG | - | chr6_1:13422233-13422252 | Msa0876040:intron | 40.0% | |
| CCTGAGTACTTGGATAATAG+CGG | - | chr6_1:13422243-13422262 | Msa0876040:intron | 40.0% | |
| GTGAAGATCCATGATGAAGA+CGG | - | chr6_1:13422415-13422434 | Msa0876040:CDS | 40.0% | |
| ! | ACATTTCCTCTAGGAGAGAT+TGG | - | chr6_1:13422500-13422519 | Msa0876040:intron | 40.0% |
| CGACATTTAAAAAGGAACGG+AGG | - | chr6_1:13422850-13422869 | Msa0876040:intron | 40.0% | |
| AATTAAAAAGGAACGGAGGG+AGG | - | chr6_1:13423513-13423532 | Msa0876040:CDS | 40.0% | |
| ATTAAAAAGGAACGGAGGGA+GGG | - | chr6_1:13423514-13423533 | Msa0876040:CDS | 40.0% | |
| TCCAAGCATCTGACCTATTT+AGG | - | chr6_1:13423594-13423613 | Msa0876040:CDS | 40.0% | |
| ACCTAAATAGGTCAGATGCT+TGG | + | chr6_1:13423598-13423617 | None:intergenic | 40.0% | |
| TCAAATGTGTTAGCAAGGCT+TGG | - | chr6_1:13423742-13423761 | Msa0876040:intron | 40.0% | |
| AAAGGCGGGATCAGATATTA+GGG | + | chr6_1:13423772-13423791 | None:intergenic | 40.0% | |
| AGGTGTAATTTCACAAAGGC+GGG | + | chr6_1:13423786-13423805 | None:intergenic | 40.0% | |
| GAGGTGTAATTTCACAAAGG+CGG | + | chr6_1:13423787-13423806 | None:intergenic | 40.0% | |
| ATAGTACGGATCGACAGAAA+GGG | + | chr6_1:13423952-13423971 | None:intergenic | 40.0% | |
| TTACCGGTCAAACGATAGTA+CGG | + | chr6_1:13423966-13423985 | None:intergenic | 40.0% | |
| TATATACTCGGTACCTGCAA+TGG | - | chr6_1:13423996-13424015 | Msa0876040:CDS | 40.0% | |
| !! | GGATTGATTCTTTTGACTGG+TGG | - | chr6_1:13424017-13424036 | Msa0876040:CDS | 40.0% |
| ! | ACTGGTGGTGATTCTCTATT+TGG | - | chr6_1:13424032-13424051 | Msa0876040:CDS | 40.0% |
| TGTTGTAATGGCCAAGAAAC+GGG | + | chr6_1:13424151-13424170 | None:intergenic | 40.0% | |
| AGCCAAAGGTGATGTTGTAA+TGG | + | chr6_1:13424163-13424182 | None:intergenic | 40.0% | |
| GAGTAGCACTCTTAATTGGT+TGG | - | chr6_1:13424355-13424374 | Msa0876040:intron | 40.0% | |
| GGCATTTCATCAAAATCACG+AGG | + | chr6_1:13424485-13424504 | None:intergenic | 40.0% | |
| TCTCGTCATGGATAAACTCT+TGG | + | chr6_1:13424682-13424701 | None:intergenic | 40.0% | |
| AGAGAATTGGATGGGATTCT+TGG | + | chr6_1:13424775-13424794 | None:intergenic | 40.0% | |
| AAATAGAGTGGAGCGAACAA+AGG | - | chr6_1:13424808-13424827 | Msa0876040:intron | 40.0% | |
| TTGCTTGAGAATGTGAGATG+TGG | + | chr6_1:13425425-13425444 | None:intergenic | 40.0% | |
| ! | CAAGCAAAAGGCACAATCTA+AGG | - | chr6_1:13425438-13425457 | Msa0876040:intron | 40.0% |
| GGAAAAGGTAAGACGATACA+TGG | - | chr6_1:13425474-13425493 | Msa0876040:intron | 40.0% | |
| TGCTATTCCAAACTGTCACA+TGG | - | chr6_1:13421242-13421261 | Msa0876040:intron | 40.0% | |
| ATGAACACCATGTGACAGTT+TGG | + | chr6_1:13421252-13421271 | None:intergenic | 40.0% | |
| TTCTCACAGCATCAAAGCAT+TGG | + | chr6_1:13426556-13426575 | None:intergenic | 40.0% | |
| CCTGAGTACTTGGATAATAG+CGG | - | chr6_1:13422243-13422262 | Msa0876040:intron | 40.0% | |
| CTTCAACAGCATCTTCATCA+TGG | + | chr6_1:13426767-13426786 | None:intergenic | 40.0% | |
| ! | ACATTTCCTCTAGGAGAGAT+TGG | - | chr6_1:13422500-13422519 | Msa0876040:intron | 40.0% |
| TTGATTTCCCACCTTGTGTG+AGG | + | chr6_1:13416386-13416405 | None:intergenic | 45.0% | |
| GGAGTGAAAAATGTGAAGGG+AGG | + | chr6_1:13416453-13416472 | None:intergenic | 45.0% | |
| AAACGGCAAATCTTGTCACC+AGG | - | chr6_1:13416693-13416712 | Msa0876040:intron | 45.0% | |
| ACCATGACATGCTTAATCCG+AGG | - | chr6_1:13417356-13417375 | Msa0876040:intron | 45.0% | |
| TCCTCGGATTAAGCATGTCA+TGG | + | chr6_1:13417360-13417379 | None:intergenic | 45.0% | |
| TGTGAAGCATAGAGACTCCT+CGG | + | chr6_1:13417376-13417395 | None:intergenic | 45.0% | |
| GTGTCAGTGCTTCATAGCAT+AGG | + | chr6_1:13417425-13417444 | None:intergenic | 45.0% | |
| TGTTGATGTCAAGTCGGTGT+TGG | - | chr6_1:13417486-13417505 | Msa0876040:intron | 45.0% | |
| AAATACAGACAGGGGACAAG+AGG | + | chr6_1:13417647-13417666 | None:intergenic | 45.0% | |
| ACATGACACTGCACAGAAAG+TGG | - | chr6_1:13418249-13418268 | Msa0876040:intron | 45.0% | |
| CATGACACTGCACAGAAAGT+GGG | - | chr6_1:13418250-13418269 | Msa0876040:intron | 45.0% | |
| ! | TGAGATGTGGTGATTTCTGG+AGG | - | chr6_1:13418547-13418566 | Msa0876040:intron | 45.0% |
| ! | GAGATGTGGTGATTTCTGGA+GGG | - | chr6_1:13418548-13418567 | Msa0876040:intron | 45.0% |
| !! | ACCTGTTCAAGAGGCATTTG+TGG | + | chr6_1:13418841-13418860 | None:intergenic | 45.0% |
| GTCAGCAATGCTTACCAAGA+AGG | - | chr6_1:13419237-13419256 | Msa0876040:intron | 45.0% | |
| !! | AGCTTGTAGTGGATCTATCG+TGG | - | chr6_1:13419501-13419520 | Msa0876040:intron | 45.0% |
| !! | GCTTGTAGTGGATCTATCGT+GGG | - | chr6_1:13419502-13419521 | Msa0876040:intron | 45.0% |
| CAGAGTCATGGAATGATTCC+TGG | - | chr6_1:13419746-13419765 | Msa0876040:intron | 45.0% | |
| TGGAATGATTCCTGGTCAGA+TGG | - | chr6_1:13419754-13419773 | Msa0876040:intron | 45.0% | |
| CAGCTATCACAACAGTACCT+TGG | + | chr6_1:13419847-13419866 | None:intergenic | 45.0% | |
| GGTACTGTTGTGATAGCTGA+TGG | - | chr6_1:13419848-13419867 | Msa0876040:intron | 45.0% | |
| GAAGAAATTCCTTTGCCCCT+TGG | - | chr6_1:13419932-13419951 | Msa0876040:intron | 45.0% | |
| TTTGGTCATCTCAGTGCCAA+GGG | + | chr6_1:13419951-13419970 | None:intergenic | 45.0% | |
| ! | TTTTGGTCATCTCAGTGCCA+AGG | + | chr6_1:13419952-13419971 | None:intergenic | 45.0% |
| AGTTTGCACCCGAAGATGTT+GGG | - | chr6_1:13419984-13420003 | Msa0876040:intron | 45.0% | |
| CAGGCTCTCGATCTTAAGAA+AGG | - | chr6_1:13420500-13420519 | Msa0876040:intron | 45.0% | |
| CGTAAGCAAAATTTGCGACG+TGG | - | chr6_1:13420554-13420573 | Msa0876040:intron | 45.0% | |
| ! | GATTTGGAACTCAACCACCA+AGG | + | chr6_1:13420588-13420607 | None:intergenic | 45.0% |
| AGGTCTTCATCCTTAACTGC+TGG | - | chr6_1:13420759-13420778 | Msa0876040:intron | 45.0% | |
| TCATCCTTAACTGCTGGCAA+TGG | - | chr6_1:13420765-13420784 | Msa0876040:intron | 45.0% | |
| ! | ATCTAAGGTCGCTGAAGCTA+AGG | - | chr6_1:13421172-13421191 | Msa0876040:intron | 45.0% |
| GCAAAAGTTGCAGGATGAGA+TGG | - | chr6_1:13421311-13421330 | Msa0876040:intron | 45.0% | |
| AGCTCGTAATGAGTTGCTTG+AGG | - | chr6_1:13421419-13421438 | Msa0876040:intron | 45.0% | |
| CTCAACTCAGTGCAGATAGT+AGG | + | chr6_1:13421741-13421760 | None:intergenic | 45.0% | |
| GGTGTGACACATGCTATTAC+AGG | - | chr6_1:13421832-13421851 | Msa0876040:CDS | 45.0% | |
| AATGGTTGCTGTCATTCGCT+TGG | - | chr6_1:13421904-13421923 | Msa0876040:CDS | 45.0% | |
| ! | CATTCGCTTGGTTGATGTCA+TGG | - | chr6_1:13421916-13421935 | Msa0876040:CDS | 45.0% |
| TTCTCACTGCATCACAGCAT+TGG | + | chr6_1:13422218-13422237 | None:intergenic | 45.0% | |
| CCGCTATTATCCAAGTACTC+AGG | + | chr6_1:13422246-13422265 | None:intergenic | 45.0% | |
| CTTCAACACCGTCTTCATCA+TGG | + | chr6_1:13422426-13422445 | None:intergenic | 45.0% | |
| TGTTTATGGAGCTGAGCAGA+AGG | - | chr6_1:13422462-13422481 | Msa0876040:CDS | 45.0% | |
| TGGTAACCAATCTCTCCTAG+AGG | + | chr6_1:13422509-13422528 | None:intergenic | 45.0% | |
| TTGTTGGAACTGCTGATGGA+AGG | + | chr6_1:13423155-13423174 | None:intergenic | 45.0% | |
| !! | AGACTTGTTGGAACTGCTGA+TGG | + | chr6_1:13423159-13423178 | None:intergenic | 45.0% |
| TCATGATTGTACACGCAGTG+GGG | + | chr6_1:13423641-13423660 | None:intergenic | 45.0% | |
| GTCATGATTGTACACGCAGT+GGG | + | chr6_1:13423642-13423661 | None:intergenic | 45.0% | |
| AGTCATGATTGTACACGCAG+TGG | + | chr6_1:13423643-13423662 | None:intergenic | 45.0% | |
| TGCGTGTACAATCATGACTC+CGG | - | chr6_1:13423644-13423663 | Msa0876040:CDS | 45.0% | |
| AAGAGATTTCACGGGAAGGA+AGG | + | chr6_1:13423715-13423734 | None:intergenic | 45.0% | |
| GAACAAGAGATTTCACGGGA+AGG | + | chr6_1:13423719-13423738 | None:intergenic | 45.0% | |
| CAAAGGCGGGATCAGATATT+AGG | + | chr6_1:13423773-13423792 | None:intergenic | 45.0% | |
| ! | TTCGTGTTGACGATCGATTG+AGG | + | chr6_1:13423806-13423825 | None:intergenic | 45.0% |
| AGAGTGACTAGTGTGAAGAG+TGG | + | chr6_1:13423831-13423850 | None:intergenic | 45.0% | |
| ! | CGATGATCATGCGGATTGTT+GGG | + | chr6_1:13423860-13423879 | None:intergenic | 45.0% |
| CCAACAATCCGCATGATCAT+CGG | - | chr6_1:13423858-13423877 | Msa0876040:intron | 45.0% | |
| CCAATTCACCGATGATCATG+CGG | + | chr6_1:13423869-13423888 | None:intergenic | 45.0% | |
| TCGACAGAAAGGGTGAATGA+CGG | + | chr6_1:13423942-13423961 | None:intergenic | 45.0% | |
| GATAGTACGGATCGACAGAA+AGG | + | chr6_1:13423953-13423972 | None:intergenic | 45.0% | |
| GATCCGTACTATCGTTTGAC+CGG | - | chr6_1:13423960-13423979 | Msa0876040:CDS | 45.0% | |
| GAGACATCTTTCTTGTGGCT+GGG | + | chr6_1:13424076-13424095 | None:intergenic | 45.0% | |
| TGAGACATCTTTCTTGTGGC+TGG | + | chr6_1:13424077-13424096 | None:intergenic | 45.0% | |
| CTGCATCATGGCTGTGAAAA+CGG | + | chr6_1:13424118-13424137 | None:intergenic | 45.0% | |
| AATGGCCAAGAAACGGGAAA+GGG | + | chr6_1:13424145-13424164 | None:intergenic | 45.0% | |
| TAATGGCCAAGAAACGGGAA+AGG | + | chr6_1:13424146-13424165 | None:intergenic | 45.0% | |
| GGCCATTACAACATCACCTT+TGG | - | chr6_1:13424158-13424177 | Msa0876040:intron | 45.0% | |
| CATCAAAATCACGAGGCAGA+CGG | + | chr6_1:13424478-13424497 | None:intergenic | 45.0% | |
| TCTGCCAATTGTTGCTGTGT+TGG | - | chr6_1:13424511-13424530 | Msa0876040:intron | 45.0% | |
| CTGCCAATTGTTGCTGTGTT+GGG | - | chr6_1:13424512-13424531 | Msa0876040:intron | 45.0% | |
| TGCCAATTGTTGCTGTGTTG+GGG | - | chr6_1:13424513-13424532 | Msa0876040:intron | 45.0% | |
| ! | GCCTCTTCTGAAAGAAGAAG+CGG | + | chr6_1:13424728-13424747 | None:intergenic | 45.0% |
| TTCAGAAGAGGCTGATACAC+TGG | - | chr6_1:13424736-13424755 | Msa0876040:intron | 45.0% | |
| AATTGGATGGGATTCTTGGC+TGG | + | chr6_1:13424771-13424790 | None:intergenic | 45.0% | |
| TATACTGTGATACTCGGCCA+AGG | - | chr6_1:13424874-13424893 | Msa0876040:intron | 45.0% | |
| TAAAAAGGCGAAACCCTTGG+AGG | - | chr6_1:13425081-13425100 | Msa0876040:intron | 45.0% | |
| GAGAGAAATGTCTCCTCCAA+GGG | + | chr6_1:13425097-13425116 | None:intergenic | 45.0% | |
| TTGAGGAAATGAGCAAGAGC+AGG | + | chr6_1:13425402-13425421 | None:intergenic | 45.0% | |
| GAGAATGTGAGATGTGGTTG+AGG | + | chr6_1:13425419-13425438 | None:intergenic | 45.0% | |
| ! | ATCTAAGGTCGCTGAAGCTA+AGG | - | chr6_1:13421172-13421191 | Msa0876040:intron | 45.0% |
| GCAAAAGTTGCAGGATGAGA+TGG | - | chr6_1:13421311-13421330 | Msa0876040:intron | 45.0% | |
| ACTGAGTTGCTTGAGGCAAA+AGG | - | chr6_1:13425707-13425726 | Msa0876040:intron | 45.0% | |
| TCAACTCAGTGCAGATAGAC+AGG | + | chr6_1:13426076-13426095 | None:intergenic | 45.0% | |
| TGGTTTCAGCACTCCATTCA+AGG | + | chr6_1:13426114-13426133 | None:intergenic | 45.0% | |
| ! | GGTGTCATAGTGTGATCAAC+CGG | - | chr6_1:13426207-13426226 | Msa0876040:intron | 45.0% |
| TCAACCGGTCATATTGTTCC+TGG | - | chr6_1:13426222-13426241 | Msa0876040:intron | 45.0% | |
| GCAACCAGGAACAATATGAC+CGG | + | chr6_1:13426229-13426248 | None:intergenic | 45.0% | |
| ! | CATTTGCGTGGTTGATGTCA+TGG | - | chr6_1:13426252-13426271 | Msa0876040:intron | 45.0% |
| GAGAATTGAGCCTGAGTACT+TGG | - | chr6_1:13426571-13426590 | Msa0876040:CDS | 45.0% | |
| CCGCTATTATCCAAGTACTC+AGG | + | chr6_1:13422246-13422265 | None:intergenic | 45.0% | |
| TGTTTATGGAGAGGAGCAGA+AGG | - | chr6_1:13426803-13426822 | Msa0876040:five_prime_UTR | 45.0% | |
| TGGTAACCAATCTCTCCTAG+AGG | + | chr6_1:13422509-13422528 | None:intergenic | 45.0% | |
| ATTTCCCACCTTGTGTGAGG+TGG | + | chr6_1:13416383-13416402 | None:intergenic | 50.0% | |
| AGTCGTCGTAACAACTCACG+CGG | - | chr6_1:13416634-13416653 | Msa0876040:CDS | 50.0% | |
| TCACGCGGTGTTCGTGTTAT+CGG | - | chr6_1:13416649-13416668 | Msa0876040:CDS | 50.0% | |
| CACAACACATGTCGGACACT+GGG | + | chr6_1:13417009-13417028 | None:intergenic | 50.0% | |
| ACACAACACATGTCGGACAC+TGG | + | chr6_1:13417010-13417029 | None:intergenic | 50.0% | |
| TGTCAGTGTCGTGTTTGTGC+CGG | - | chr6_1:13417098-13417117 | Msa0876040:intron | 50.0% | |
| ! | AGGGAGCACATTTCGAACAC+TGG | - | chr6_1:13418567-13418586 | Msa0876040:intron | 50.0% |
| TGGCAGAACCTGATGACACA+AGG | + | chr6_1:13418821-13418840 | None:intergenic | 50.0% | |
| GCCACAAATGCCTCTTGAAC+AGG | - | chr6_1:13418837-13418856 | Msa0876040:intron | 50.0% | |
| GGGAACCAAACCTGTTCAAG+AGG | + | chr6_1:13418850-13418869 | None:intergenic | 50.0% | |
| ATATGGGGAAAAGGCGGAAG+AGG | - | chr6_1:13418984-13419003 | Msa0876040:intron | 50.0% | |
| TCTATCGTGGGAACCTGAGA+AGG | - | chr6_1:13419514-13419533 | Msa0876040:intron | 50.0% | |
| CTTTCCAACGGAGTTTCCGA+TGG | - | chr6_1:13419677-13419696 | Msa0876040:intron | 50.0% | |
| ATCACCATCGGAAACTCCGT+TGG | + | chr6_1:13419684-13419703 | None:intergenic | 50.0% | |
| !! | TTAGGAGCATCCATCTGACC+AGG | + | chr6_1:13419767-13419786 | None:intergenic | 50.0% |
| TGGTCAGATGGATGCTCCTA+AGG | - | chr6_1:13419766-13419785 | Msa0876040:intron | 50.0% | |
| TTGGTCATCTCAGTGCCAAG+GGG | + | chr6_1:13419950-13419969 | None:intergenic | 50.0% | |
| CATCTTCGGGTGCAAACTCA+AGG | + | chr6_1:13419982-13420001 | None:intergenic | 50.0% | |
| GAGTTTGCACCCGAAGATGT+TGG | - | chr6_1:13419983-13420002 | Msa0876040:intron | 50.0% | |
| ACGTGGACAAAATGCCTTGG+TGG | - | chr6_1:13420571-13420590 | Msa0876040:intron | 50.0% | |
| CCTTTATTGAGCCAATCCGC+CGG | + | chr6_1:13420858-13420877 | None:intergenic | 50.0% | |
| GGTCGCTGAAGCTAAGGAAA+AGG | - | chr6_1:13421178-13421197 | Msa0876040:intron | 50.0% | |
| ACTGCTGATGGAAGGTGAAG+AGG | + | chr6_1:13423147-13423166 | None:intergenic | 50.0% | |
| GGTCAGATGCTTGGACAGTA+AGG | + | chr6_1:13423589-13423608 | None:intergenic | 50.0% | |
| CATGATTGTACACGCAGTGG+GGG | + | chr6_1:13423640-13423659 | None:intergenic | 50.0% | |
| AACTCTGCGATCAGATCGTC+CGG | + | chr6_1:13423687-13423706 | None:intergenic | 50.0% | |
| ! | CCGATGATCATGCGGATTGT+TGG | + | chr6_1:13423861-13423880 | None:intergenic | 50.0% |
| CCGCATGATCATCGGTGAAT+TGG | - | chr6_1:13423866-13423885 | Msa0876040:intron | 50.0% | |
| CGACAGAAAGGGTGAATGAC+GGG | + | chr6_1:13423941-13423960 | None:intergenic | 50.0% | |
| ACAGCAACAATTGGCAGAGC+AGG | + | chr6_1:13424509-13424528 | None:intergenic | 50.0% | |
| GCCAATTGTTGCTGTGTTGG+GGG | - | chr6_1:13424514-13424533 | Msa0876040:intron | 50.0% | |
| CCAATTGTTGCTGTGTTGGG+GGG | - | chr6_1:13424515-13424534 | Msa0876040:intron | 50.0% | |
| GCCGCTTCTTCTTTCAGAAG+AGG | - | chr6_1:13424724-13424743 | Msa0876040:intron | 50.0% | |
| GGAGAGAAATGTCTCCTCCA+AGG | + | chr6_1:13425098-13425117 | None:intergenic | 50.0% | |
| GGTCGCTGAAGCTAAGGAAA+AGG | - | chr6_1:13421178-13421197 | Msa0876040:intron | 50.0% | |
| AGCTCGTACTGAGTTGCTTG+AGG | - | chr6_1:13425700-13425719 | Msa0876040:intron | 50.0% | |
| ACACAAGGCTTCCCACCTCT+TGG | + | chr6_1:13418806-13418825 | None:intergenic | 55.0% | |
| ! | GTGGGAAGCCTTGTGTCATC+AGG | - | chr6_1:13418810-13418829 | Msa0876040:intron | 55.0% |
| ! | GTTCATTCGGCCAAGGCATC+TGG | - | chr6_1:13419202-13419221 | Msa0876040:intron | 55.0% |
| ATCTCAGTGCCAAGGGGCAA+AGG | + | chr6_1:13419944-13419963 | None:intergenic | 55.0% | |
| GCGACGTGGACAAAATGCCT+TGG | - | chr6_1:13420568-13420587 | Msa0876040:intron | 55.0% | |
| !! | CCGGCGGATTGGCTCAATAA+AGG | - | chr6_1:13420855-13420874 | Msa0876040:intron | 55.0% |
| TGGAGCTGAGCAGAAGGATG+AGG | - | chr6_1:13422468-13422487 | Msa0876040:CDS | 55.0% | |
| AATCATGACTCCGGTGACGC+CGG | - | chr6_1:13423653-13423672 | Msa0876040:CDS | 55.0% | |
| GGAAAGGGTGGTCTGCATCA+TGG | + | chr6_1:13424130-13424149 | None:intergenic | 55.0% | |
| GACCACCCTTTCCCGTTTCT+TGG | - | chr6_1:13424137-13424156 | Msa0876040:intron | 55.0% | |
| GCAACAATTGGCAGAGCAGG+TGG | + | chr6_1:13424506-13424525 | None:intergenic | 55.0% | |
| CCCCCCAACACAGCAACAAT+TGG | + | chr6_1:13424518-13424537 | None:intergenic | 55.0% | |
| CCACGCAAATGACAGCAACC+AGG | + | chr6_1:13426243-13426262 | None:intergenic | 55.0% | |
| ! | CCTGGTTGCTGTCATTTGCG+TGG | - | chr6_1:13426240-13426259 | Msa0876040:intron | 55.0% |
| TGGAGAGGAGCAGAAGGATG+AGG | - | chr6_1:13426809-13426828 | Msa0876040:five_prime_UTR | 55.0% | |
| !! | CTTGTGTGAGGTGGCGGGAA+CGG | + | chr6_1:13416374-13416393 | None:intergenic | 60.0% |
| TCCCACCTTGTGTGAGGTGG+CGG | + | chr6_1:13416380-13416399 | None:intergenic | 60.0% | |
| GATTGTACACGCAGTGGGGG+TGG | + | chr6_1:13423637-13423656 | None:intergenic | 60.0% | |
| AGATCGTCCGGAAGGACCAC+CGG | + | chr6_1:13423675-13423694 | None:intergenic | 60.0% | |
| CTGCGATCAGATCGTCCGGA+AGG | + | chr6_1:13423683-13423702 | None:intergenic | 60.0% | |
| GGCCAAGAAACGGGAAAGGG+TGG | + | chr6_1:13424142-13424161 | None:intergenic | 60.0% | |
| CGTTCCCGCCACCTCACACA+AGG | - | chr6_1:13416372-13416391 | Msa0876040:CDS | 65.0% | |
| TCCCGCCACCTCACACAAGG+TGG | - | chr6_1:13416375-13416394 | Msa0876040:CDS | 65.0% | |
| CCCACCTTGTGTGAGGTGGC+GGG | + | chr6_1:13416379-13416398 | None:intergenic | 65.0% | |
| CCCGCCACCTCACACAAGGT+GGG | - | chr6_1:13416376-13416395 | Msa0876040:CDS | 65.0% | |
| CATGACTCCGGTGACGCCGG+TGG | - | chr6_1:13423656-13423675 | Msa0876040:CDS | 70.0% | |
| GGAAGGACCACCGGCGTCAC+CGG | + | chr6_1:13423666-13423685 | None:intergenic | 70.0% | |
| GGTGACGCCGGTGGTCCTTC+CGG | - | chr6_1:13423665-13423684 | Msa0876040:CDS | 70.0% | |
| CAGTGGGGGTGGCGCCGTTG+AGG | + | chr6_1:13423626-13423645 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 13416368 | 13426887 | 13416368 | ID=Msa0876040;Name=Msa0876040 |
| chr6_1 | mRNA | 13416368 | 13426887 | 13416368 | ID=Msa0876040-mRNA-1;Parent=Msa0876040;Name=Msa0876040-mRNA-1;_AED=0.12;_eAED=0.13;_QI=182|0.84|0.64|1|1|1|14|0|751 |
| chr6_1 | exon | 13416368 | 13416501 | 13416368 | ID=Msa0876040-mRNA-1:exon:3961;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13416593 | 13416706 | 13416593 | ID=Msa0876040-mRNA-1:exon:3960;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13417512 | 13417677 | 13417512 | ID=Msa0876040-mRNA-1:exon:3959;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13420766 | 13420842 | 13420766 | ID=Msa0876040-mRNA-1:exon:3958;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13420934 | 13421044 | 13420934 | ID=Msa0876040-mRNA-1:exon:3957;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13421793 | 13421958 | 13421793 | ID=Msa0876040-mRNA-1:exon:3956;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13422056 | 13422146 | 13422056 | ID=Msa0876040-mRNA-1:exon:3955;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13422297 | 13422494 | 13422297 | ID=Msa0876040-mRNA-1:exon:3954;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13422610 | 13422752 | 13422610 | ID=Msa0876040-mRNA-1:exon:3953;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13423207 | 13423755 | 13423207 | ID=Msa0876040-mRNA-1:exon:3952;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13423931 | 13424087 | 13423931 | ID=Msa0876040-mRNA-1:exon:3951;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13424185 | 13424271 | 13424185 | ID=Msa0876040-mRNA-1:exon:3950;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13424397 | 13424494 | 13424397 | ID=Msa0876040-mRNA-1:exon:3949;Parent=Msa0876040-mRNA-1 |
| chr6_1 | exon | 13426541 | 13426887 | 13426541 | ID=Msa0876040-mRNA-1:exon:3948;Parent=Msa0876040-mRNA-1 |
| chr6_1 | five_prime_UTR | 13426706 | 13426887 | 13426706 | ID=Msa0876040-mRNA-1:five_prime_utr;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13426541 | 13426705 | 13426541 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13424397 | 13424494 | 13424397 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13424185 | 13424271 | 13424185 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13423931 | 13424087 | 13423931 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13423207 | 13423755 | 13423207 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13422610 | 13422752 | 13422610 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13422297 | 13422494 | 13422297 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13422056 | 13422146 | 13422056 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13421793 | 13421958 | 13421793 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13420934 | 13421044 | 13420934 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13420766 | 13420842 | 13420766 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13417512 | 13417677 | 13417512 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13416593 | 13416706 | 13416593 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| chr6_1 | CDS | 13416368 | 13416501 | 13416368 | ID=Msa0876040-mRNA-1:cds;Parent=Msa0876040-mRNA-1 |
| Gene Sequence |
| Protein sequence |
