Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310850 | XP_024632319.1 | 93.092 | 912 | 60 | 1 | 1 | 912 | 1 | 909 | 0.0 | 1669 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310850 | sp|P0CB23|Y4862_ARATH | 42.048 | 459 | 250 | 4 | 6 | 449 | 5 | 462 | 3.86e-84 | 295 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0001940 | Msa0310850 | 0.860950 | 1.444513e-63 | -8.615850e-47 |
| Msa0005890 | Msa0310850 | 0.824093 | 9.730779e-54 | -8.615850e-47 |
| Msa0016040 | Msa0310850 | 0.812962 | 3.255793e-51 | -8.615850e-47 |
| Msa0017950 | Msa0310850 | 0.864325 | 1.318584e-64 | -8.615850e-47 |
| Msa0027280 | Msa0310850 | 0.802260 | 6.105115e-49 | -8.615850e-47 |
| Msa0030370 | Msa0310850 | 0.820999 | 5.096843e-53 | -8.615850e-47 |
| Msa0048510 | Msa0310850 | 0.862509 | 4.819766e-64 | -8.615850e-47 |
| Msa0049760 | Msa0310850 | 0.800962 | 1.126632e-48 | -8.615850e-47 |
| Msa0052480 | Msa0310850 | 0.829258 | 5.693395e-55 | -8.615850e-47 |
| Msa0053230 | Msa0310850 | 0.813919 | 2.005801e-51 | -8.615850e-47 |
| Msa0054690 | Msa0310850 | 0.824333 | 8.541538e-54 | -8.615850e-47 |
| Msa0065020 | Msa0310850 | 0.807750 | 4.340553e-50 | -8.615850e-47 |
| Msa0077340 | Msa0310850 | 0.829043 | 6.417359e-55 | -8.615850e-47 |
| Msa0077560 | Msa0310850 | 0.835691 | 1.448073e-56 | -8.615850e-47 |
| Msa0081570 | Msa0310850 | 0.800557 | 1.362713e-48 | -8.615850e-47 |
| Msa0081980 | Msa0310850 | 0.827581 | 1.445287e-54 | -8.615850e-47 |
| Msa0082020 | Msa0310850 | 0.805910 | 1.062621e-49 | -8.615850e-47 |
| Msa0089880 | Msa0310850 | 0.807922 | 3.988634e-50 | -8.615850e-47 |
| Msa0094780 | Msa0310850 | 0.875676 | 2.554100e-68 | -8.615850e-47 |
| Msa0097770 | Msa0310850 | 0.822622 | 2.146837e-53 | -8.615850e-47 |
| Msa0098520 | Msa0310850 | 0.821212 | 4.553051e-53 | -8.615850e-47 |
| Msa0098730 | Msa0310850 | 0.832606 | 8.587845e-56 | -8.615850e-47 |
| Msa0106620 | Msa0310850 | 0.827771 | 1.301400e-54 | -8.615850e-47 |
| Msa0106710 | Msa0310850 | 0.804803 | 1.812288e-49 | -8.615850e-47 |
| Msa0125360 | Msa0310850 | 0.812456 | 4.200427e-51 | -8.615850e-47 |
| Msa0128460 | Msa0310850 | 0.818272 | 2.137002e-52 | -8.615850e-47 |
| Msa0133150 | Msa0310850 | 0.819313 | 1.240206e-52 | -8.615850e-47 |
| Msa0133280 | Msa0310850 | 0.844561 | 7.006567e-59 | -8.615850e-47 |
| Msa0136250 | Msa0310850 | 0.800039 | 1.737346e-48 | -8.615850e-47 |
| Msa0140280 | Msa0310850 | 0.822449 | 2.355010e-53 | -8.615850e-47 |
| Msa0143670 | Msa0310850 | 0.803960 | 2.716445e-49 | -8.615850e-47 |
| Msa0172480 | Msa0310850 | 0.809891 | 1.512402e-50 | -8.615850e-47 |
| Msa0173810 | Msa0310850 | 0.810369 | 1.192793e-50 | -8.615850e-47 |
| Msa0174290 | Msa0310850 | 0.804120 | 2.515666e-49 | -8.615850e-47 |
| Msa0190110 | Msa0310850 | 0.937504 | 3.110277e-98 | -8.615850e-47 |
| Msa0190570 | Msa0310850 | 0.852714 | 3.850506e-61 | -8.615850e-47 |
| Msa0190730 | Msa0310850 | 0.814246 | 1.698949e-51 | -8.615850e-47 |
| Msa0200050 | Msa0310850 | 0.803156 | 3.986890e-49 | -8.615850e-47 |
| Msa0213030 | Msa0310850 | 0.833135 | 6.344114e-56 | -8.615850e-47 |
| Msa0221000 | Msa0310850 | 0.810659 | 1.032797e-50 | -8.615850e-47 |
| Msa0223080 | Msa0310850 | 0.813862 | 2.065143e-51 | -8.615850e-47 |
| Msa0223210 | Msa0310850 | 0.815540 | 8.772548e-52 | -8.615850e-47 |
| Msa0225860 | Msa0310850 | 0.862287 | 5.640306e-64 | -8.615850e-47 |
| Msa0237210 | Msa0310850 | 0.813012 | 3.174977e-51 | -8.615850e-47 |
| Msa0241610 | Msa0310850 | 0.802567 | 5.277990e-49 | -8.615850e-47 |
| Msa0242590 | Msa0310850 | 0.822235 | 2.640359e-53 | -8.615850e-47 |
| Msa0247890 | Msa0310850 | 0.801621 | 8.260275e-49 | -8.615850e-47 |
| Msa0260510 | Msa0310850 | 0.846870 | 1.655491e-59 | -8.615850e-47 |
| Msa0269210 | Msa0310850 | 0.811435 | 7.011199e-51 | -8.615850e-47 |
| Msa0271880 | Msa0310850 | 0.992868 | 6.006448e-196 | -8.615850e-47 |
| Msa0279690 | Msa0310850 | 0.808316 | 3.288667e-50 | -8.615850e-47 |
| Msa0280790 | Msa0310850 | 0.808033 | 3.777462e-50 | -8.615850e-47 |
| Msa0298470 | Msa0310850 | 0.873864 | 1.056386e-67 | -8.615850e-47 |
| Msa0300270 | Msa0310850 | 0.807784 | 4.267312e-50 | -8.615850e-47 |
| Msa0300320 | Msa0310850 | 0.811326 | 7.403517e-51 | -8.615850e-47 |
| Msa0302160 | Msa0310850 | 0.813478 | 2.507883e-51 | -8.615850e-47 |
| Msa0302290 | Msa0310850 | 0.817340 | 3.469123e-52 | -8.615850e-47 |
| Msa0307270 | Msa0310850 | 0.801406 | 9.142910e-49 | -8.615850e-47 |
| Msa0310850 | Msa0315690 | 0.817422 | 3.324672e-52 | -8.615850e-47 |
| Msa0310850 | Msa0330380 | 0.862837 | 3.818637e-64 | -8.615850e-47 |
| Msa0310850 | Msa0337700 | 0.812869 | 3.412645e-51 | -8.615850e-47 |
| Msa0310850 | Msa0339490 | 0.813636 | 2.315414e-51 | -8.615850e-47 |
| Msa0310850 | Msa0339500 | 0.804571 | 2.026127e-49 | -8.615850e-47 |
| Msa0310850 | Msa0339650 | 0.813286 | 2.764404e-51 | -8.615850e-47 |
| Msa0310850 | Msa0340500 | 0.831153 | 1.961289e-55 | -8.615850e-47 |
| Msa0310850 | Msa0361910 | 0.857055 | 2.118530e-62 | -8.615850e-47 |
| Msa0310850 | Msa0367150 | 0.804784 | 1.829567e-49 | -8.615850e-47 |
| Msa0310850 | Msa0369790 | 0.810425 | 1.159867e-50 | -8.615850e-47 |
| Msa0310850 | Msa0371030 | 0.821255 | 4.450152e-53 | -8.615850e-47 |
| Msa0310850 | Msa0372810 | 0.804691 | 1.912775e-49 | -8.615850e-47 |
| Msa0310850 | Msa0380670 | 0.812852 | 3.441879e-51 | -8.615850e-47 |
| Msa0310850 | Msa0409830 | 0.809996 | 1.435171e-50 | -8.615850e-47 |
| Msa0310850 | Msa0419540 | 0.822258 | 2.608420e-53 | -8.615850e-47 |
| Msa0310850 | Msa0428580 | 0.800476 | 1.415538e-48 | -8.615850e-47 |
| Msa0310850 | Msa0430300 | 0.811712 | 6.104595e-51 | -8.615850e-47 |
| Msa0310850 | Msa0432170 | 0.801716 | 7.897376e-49 | -8.615850e-47 |
| Msa0310850 | Msa0459740 | 0.803919 | 2.770578e-49 | -8.615850e-47 |
| Msa0310850 | Msa0464000 | 0.808558 | 2.919776e-50 | -8.615850e-47 |
| Msa0310850 | Msa0465530 | 0.817700 | 2.878012e-52 | -8.615850e-47 |
| Msa0310850 | Msa0481890 | 0.854757 | 9.948199e-62 | -8.615850e-47 |
| Msa0310850 | Msa0483100 | 0.833002 | 6.846069e-56 | -8.615850e-47 |
| Msa0310850 | Msa0509550 | 0.806318 | 8.717478e-50 | -8.615850e-47 |
| Msa0310850 | Msa0521020 | 0.818889 | 1.548996e-52 | -8.615850e-47 |
| Msa0310850 | Msa0529030 | 0.831744 | 1.402920e-55 | -8.615850e-47 |
| Msa0310850 | Msa0534720 | 0.855127 | 7.769246e-62 | -8.615850e-47 |
| Msa0310850 | Msa0567170 | 0.841119 | 5.764124e-58 | -8.615850e-47 |
| Msa0310850 | Msa0571290 | 0.804227 | 2.390664e-49 | -8.615850e-47 |
| Msa0310850 | Msa0573850 | 0.824952 | 6.106782e-54 | -8.615850e-47 |
| Msa0310850 | Msa0580370 | 0.869785 | 2.386674e-66 | -8.615850e-47 |
| Msa0310850 | Msa0580810 | 0.807997 | 3.845792e-50 | -8.615850e-47 |
| Msa0310850 | Msa0581470 | 0.866820 | 2.156279e-65 | -8.615850e-47 |
| Msa0310850 | Msa0583830 | 0.809526 | 1.811913e-50 | -8.615850e-47 |
| Msa0310850 | Msa0590830 | 0.814499 | 1.493666e-51 | -8.615850e-47 |
| Msa0310850 | Msa0597790 | 0.800425 | 1.449703e-48 | -8.615850e-47 |
| Msa0310850 | Msa0620980 | 0.816900 | 4.357485e-52 | -8.615850e-47 |
| Msa0310850 | Msa0621710 | 0.813790 | 2.141756e-51 | -8.615850e-47 |
| Msa0310850 | Msa0624900 | 0.872470 | 3.103268e-67 | -8.615850e-47 |
| Msa0310850 | Msa0652000 | 0.805732 | 1.157854e-49 | -8.615850e-47 |
| Msa0310850 | Msa0657180 | 0.801610 | 8.303812e-49 | -8.615850e-47 |
| Msa0310850 | Msa0658640 | 0.852308 | 5.026554e-61 | -8.615850e-47 |
| Msa0310850 | Msa0661150 | 0.803952 | 2.726752e-49 | -8.615850e-47 |
| Msa0310850 | Msa0666700 | 0.827422 | 1.578105e-54 | -8.615850e-47 |
| Msa0310850 | Msa0670100 | 0.800586 | 1.344375e-48 | -8.615850e-47 |
| Msa0310850 | Msa0683470 | 0.808902 | 2.464887e-50 | -8.615850e-47 |
| Msa0310850 | Msa0701220 | 0.801425 | 9.061437e-49 | -8.615850e-47 |
| Msa0310850 | Msa0703600 | 0.825557 | 4.393402e-54 | -8.615850e-47 |
| Msa0310850 | Msa0709200 | 0.827657 | 1.386329e-54 | -8.615850e-47 |
| Msa0310850 | Msa0709440 | 0.856192 | 3.798625e-62 | -8.615850e-47 |
| Msa0310850 | Msa0709630 | 0.810962 | 8.878452e-51 | -8.615850e-47 |
| Msa0310850 | Msa0714790 | 0.807347 | 5.283061e-50 | -8.615850e-47 |
| Msa0310850 | Msa0721080 | 0.814879 | 1.230362e-51 | -8.615850e-47 |
| Msa0310850 | Msa0735780 | 0.832013 | 1.204193e-55 | -8.615850e-47 |
| Msa0310850 | Msa0761670 | 0.810889 | 9.210233e-51 | -8.615850e-47 |
| Msa0310850 | Msa0773630 | 0.832056 | 1.174907e-55 | -8.615850e-47 |
| Msa0310850 | Msa0777750 | 0.810661 | 1.031484e-50 | -8.615850e-47 |
| Msa0310850 | Msa0795870 | 0.885778 | 6.060629e-72 | -8.615850e-47 |
| Msa0310850 | Msa0804000 | 0.823018 | 1.736129e-53 | -8.615850e-47 |
| Msa0310850 | Msa0824450 | 0.852395 | 4.749675e-61 | -8.615850e-47 |
| Msa0310850 | Msa0828970 | 0.801078 | 1.066736e-48 | -8.615850e-47 |
| Msa0310850 | Msa0833650 | 0.881242 | 2.825460e-70 | -8.615850e-47 |
| Msa0310850 | Msa0836150 | 0.808672 | 2.760875e-50 | -8.615850e-47 |
| Msa0310850 | Msa0842070 | 0.830884 | 2.283603e-55 | -8.615850e-47 |
| Msa0310850 | Msa0876040 | 0.801229 | 9.937990e-49 | -8.615850e-47 |
| Msa0310850 | Msa0878280 | 0.833810 | 4.305296e-56 | -8.615850e-47 |
| Msa0310850 | Msa0894400 | 0.809195 | 2.133710e-50 | -8.615850e-47 |
| Msa0310850 | Msa0902510 | 0.809053 | 2.288411e-50 | -8.615850e-47 |
| Msa0310850 | Msa0915520 | 0.801152 | 1.030502e-48 | -8.615850e-47 |
| Msa0310850 | Msa0921000 | 0.841524 | 4.509944e-58 | -8.615850e-47 |
| Msa0310850 | Msa0933760 | 0.803324 | 3.680947e-49 | -8.615850e-47 |
| Msa0310850 | Msa0941170 | 0.806202 | 9.224737e-50 | -8.615850e-47 |
| Msa0310850 | Msa0959520 | 0.807405 | 5.135699e-50 | -8.615850e-47 |
| Msa0310850 | Msa0966320 | 0.809000 | 2.348415e-50 | -8.615850e-47 |
| Msa0310850 | Msa0966480 | 0.800789 | 1.222308e-48 | -8.615850e-47 |
| Msa0310850 | Msa0997920 | 0.816862 | 4.444020e-52 | -8.615850e-47 |
| Msa0310850 | Msa1000920 | 0.806317 | 8.722975e-50 | -8.615850e-47 |
| Msa0310850 | Msa1013350 | 0.815461 | 9.134575e-52 | -8.615850e-47 |
| Msa0310850 | Msa1019470 | 0.806683 | 7.301285e-50 | -8.615850e-47 |
| Msa0310850 | Msa1028100 | 0.806694 | 7.265169e-50 | -8.615850e-47 |
| Msa0310850 | Msa1037540 | 0.818513 | 1.884883e-52 | -8.615850e-47 |
| Msa0310850 | Msa1081390 | 0.816448 | 5.501825e-52 | -8.615850e-47 |
| Msa0310850 | Msa1084530 | 0.850343 | 1.806090e-60 | -8.615850e-47 |
| Msa0310850 | Msa1094010 | 0.835065 | 2.084779e-56 | -8.615850e-47 |
| Msa0310850 | Msa1103990 | 0.840545 | 8.153610e-58 | -8.615850e-47 |
| Msa0310850 | Msa1116220 | 0.805919 | 1.057795e-49 | -8.615850e-47 |
| Msa0310850 | Msa1125820 | 0.851391 | 9.150790e-61 | -8.615850e-47 |
| Msa0310850 | Msa1125990 | 0.857504 | 1.560880e-62 | -8.615850e-47 |
| Msa0310850 | Msa1132840 | 0.873987 | 9.600434e-68 | -8.615850e-47 |
| Msa0310850 | Msa1155170 | -0.808764 | 2.638254e-50 | -8.615850e-47 |
| Msa0310850 | Msa1160920 | 0.811145 | 8.103884e-51 | -8.615850e-47 |
| Msa0310850 | Msa1171290 | 0.852884 | 3.443398e-61 | -8.615850e-47 |
| Msa0310850 | Msa1174230 | 0.801747 | 7.782936e-49 | -8.615850e-47 |
| Msa0310850 | Msa1186020 | 0.815131 | 1.082009e-51 | -8.615850e-47 |
| Msa0310850 | Msa1190590 | 0.829939 | 3.886765e-55 | -8.615850e-47 |
| Msa0310850 | Msa1192570 | 0.869439 | 3.092879e-66 | -8.615850e-47 |
| Msa0310850 | Msa1198250 | 0.800602 | 1.334578e-48 | -8.615850e-47 |
| Msa0310850 | Msa1200570 | 0.818677 | 1.730076e-52 | -8.615850e-47 |
| Msa0310850 | Msa1200890 | 0.863676 | 2.099604e-64 | -8.615850e-47 |
| Msa0310850 | Msa1208430 | 0.811825 | 5.769167e-51 | -8.615850e-47 |
| Msa0310850 | Msa1208950 | 0.848788 | 4.903869e-60 | -8.615850e-47 |
| Msa0310850 | Msa1215870 | 0.835105 | 2.036849e-56 | -8.615850e-47 |
| Msa0310850 | Msa1225860 | -0.802307 | 5.970729e-49 | -8.615850e-47 |
| Msa0310850 | Msa1226520 | 0.850190 | 1.992682e-60 | -8.615850e-47 |
| Msa0310850 | Msa1228870 | 0.803014 | 4.265653e-49 | -8.615850e-47 |
| Msa0310850 | Msa1236410 | 0.803244 | 3.823821e-49 | -8.615850e-47 |
| Msa0310850 | Msa1240260 | 0.800844 | 1.191219e-48 | -8.615850e-47 |
| Msa0310850 | Msa1253550 | 0.825388 | 4.816974e-54 | -8.615850e-47 |
| Msa0310850 | Msa1254240 | 0.801956 | 7.049278e-49 | -8.615850e-47 |
| Msa0310850 | Msa1263490 | 0.803144 | 4.010953e-49 | -8.615850e-47 |
| Msa0310850 | Msa1292590 | 0.823877 | 1.093143e-53 | -8.615850e-47 |
| Msa0310850 | Msa1293870 | 0.807599 | 4.672910e-50 | -8.615850e-47 |
| Msa0310850 | Msa1298370 | 0.815864 | 7.430582e-52 | -8.615850e-47 |
| Msa0310850 | Msa1307630 | 0.838660 | 2.520616e-57 | -8.615850e-47 |
| Msa0310850 | Msa1320670 | 0.832077 | 1.161209e-55 | -8.615850e-47 |
| Msa0310850 | Msa1325490 | 0.803189 | 3.925476e-49 | -8.615850e-47 |
| Msa0310850 | Msa1329980 | 0.805378 | 1.373915e-49 | -8.615850e-47 |
| Msa0310850 | Msa1340200 | 0.810206 | 1.293285e-50 | -8.615850e-47 |
| Msa0310850 | Msa1343170 | 0.843544 | 1.312595e-58 | -8.615850e-47 |
| Msa0310850 | Msa1343180 | 0.834613 | 2.708856e-56 | -8.615850e-47 |
| Msa0310850 | Msa1359690 | 0.818558 | 1.841242e-52 | -8.615850e-47 |
| Msa0310850 | Msa1373100 | 0.827162 | 1.821312e-54 | -8.615850e-47 |
| Msa0310850 | Msa1381180 | 0.813005 | 3.185214e-51 | -8.615850e-47 |
| Msa0310850 | Msa1383530 | 0.802823 | 4.671788e-49 | -8.615850e-47 |
| Msa0310850 | Msa1384150 | 0.806671 | 7.346456e-50 | -8.615850e-47 |
| Msa0310850 | Msa1389690 | 0.818811 | 1.612793e-52 | -8.615850e-47 |
| Msa0310850 | Msa1392580 | 0.833875 | 4.147933e-56 | -8.615850e-47 |
| Msa0310850 | Msa1396030 | 0.804013 | 2.648710e-49 | -8.615850e-47 |
| Msa0310850 | Msa1397400 | 0.847020 | 1.505736e-59 | -8.615850e-47 |
| Msa0310850 | Msa1405460 | 0.829995 | 3.767095e-55 | -8.615850e-47 |
| Msa0310850 | Msa1420950 | 0.842730 | 2.162648e-58 | -8.615850e-47 |
| Msa0310850 | Msa1422950 | 0.827126 | 1.858100e-54 | -8.615850e-47 |
| Msa0310850 | Msa1427200 | 0.827449 | 1.554834e-54 | -8.615850e-47 |
| Msa0310850 | Msa1429070 | 0.821798 | 3.333753e-53 | -8.615850e-47 |
| Msa0310850 | Msa1437930 | 0.802942 | 4.416384e-49 | -8.615850e-47 |
| Msa0310850 | Msa1440880 | 0.862727 | 4.129927e-64 | -8.615850e-47 |
| Msa0310850 | Msa1446810 | 0.805966 | 1.034140e-49 | -8.615850e-47 |
| Msa0310850 | Msa1446820 | 0.809727 | 1.640425e-50 | -8.615850e-47 |
| Msa0310850 | Msa1451160 | 0.808667 | 2.767882e-50 | -8.615850e-47 |
| Msa0310850 | Msa1464090 | 0.807950 | 3.934021e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310850 | MtrunA17_Chr2g0279621 | 93.092 | 912 | 60 | 1 | 1 | 912 | 1 | 909 | 0.0 | 1669 |
| Msa0310850 | MtrunA17_Chr8g0367551 | 33.916 | 687 | 379 | 10 | 6 | 641 | 5 | 667 | 2.92e-89 | 300 |
| Msa0310850 | MtrunA17_Chr5g0412231 | 27.924 | 684 | 376 | 19 | 188 | 854 | 75 | 658 | 2.17e-36 | 147 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0310850 | AT4G38062.1 | 42.048 | 459 | 250 | 4 | 6 | 449 | 5 | 462 | 3.92e-85 | 295 |
Find 136 sgRNAs with CRISPR-Local
Find 166 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCGAATTTCTTGTTCTTTGT+TGG | 0.207774 | 2_4:+5657692 | None:intergenic |
| GCACCTTAAGTCGTTGTTAT+TGG | 0.215312 | 2_4:-5658468 | Msa0310850:CDS |
| ACAATCCCATTGAGATTCTT+TGG | 0.224840 | 2_4:+5657764 | None:intergenic |
| AGAAGTTTCCATCTCTTTAC+AGG | 0.229736 | 2_4:+5657185 | None:intergenic |
| AGTATCCTATCAAGAAATTC+AGG | 0.246636 | 2_4:-5657211 | Msa0310850:CDS |
| TGAAACTATAAAGCACTTTC+AGG | 0.248889 | 2_4:-5656800 | Msa0310850:CDS |
| CAAAGGAAGCCGAGAGATTT+AGG | 0.271291 | 2_4:-5657023 | Msa0310850:CDS |
| TTTGACACAAACTGCTTTAC+CGG | 0.280794 | 2_4:+5657548 | None:intergenic |
| TCAGCTGCAGATAGCTTTAC+TGG | 0.288042 | 2_4:-5657067 | Msa0310850:CDS |
| ATCTTCCTTGCAAATGAGTT+TGG | 0.288186 | 2_4:-5658210 | Msa0310850:CDS |
| TGCTGAGAGGGTGTTCAAAT+TGG | 0.308939 | 2_4:-5658588 | Msa0310850:CDS |
| AGCAGGAGGAAGATCTTCTT+TGG | 0.311555 | 2_4:-5656843 | Msa0310850:CDS |
| TTTCCATGGACTCTTGCTTC+AGG | 0.322376 | 2_4:+5656917 | None:intergenic |
| AGAAAGTAAGAGGAAGCTTT+TGG | 0.328142 | 2_4:-5658117 | Msa0310850:CDS |
| AATCCTTCTCCATCATTGTT+TGG | 0.334457 | 2_4:+5656980 | None:intergenic |
| AGATAGTTCATCATTCTTAC+TGG | 0.342720 | 2_4:+5657284 | None:intergenic |
| CTGTGCAAGATAAAATTAAA+TGG | 0.345099 | 2_4:-5658343 | Msa0310850:CDS |
| AAGTAATAGTGAGTTGGTTT+TGG | 0.354371 | 2_4:-5658561 | Msa0310850:CDS |
| TGAAAGAAAAGTTGCATTTG+AGG | 0.358411 | 2_4:-5657334 | Msa0310850:CDS |
| CCAACAAAGAACAAGAAATT+CGG | 0.361782 | 2_4:-5657692 | Msa0310850:CDS |
| GGTTCCCTGAATTTCTTGAT+AGG | 0.371601 | 2_4:+5657206 | None:intergenic |
| GTACATTGTGCATTTAAATT+CGG | 0.376734 | 2_4:-5658636 | Msa0310850:CDS |
| TACTGCTAGAAACAGTTGTT+TGG | 0.378369 | 2_4:-5658525 | Msa0310850:CDS |
| AGACAATTCTCTAAACAATA+TGG | 0.379124 | 2_4:-5657478 | Msa0310850:CDS |
| AAGCAGAACTCGAGAAGCTT+AGG | 0.382942 | 2_4:-5658841 | Msa0310850:CDS |
| AAGATGGAAGCAGATGTTAT+TGG | 0.387513 | 2_4:-5657732 | Msa0310850:CDS |
| CGAGATGTGTAATCATGCTT+TGG | 0.387638 | 2_4:-5658147 | Msa0310850:CDS |
| GGTTTCTGTACCGAATGATT+TGG | 0.388474 | 2_4:+5657569 | None:intergenic |
| GAGTACATCTATGACAAAAT+TGG | 0.399018 | 2_4:-5656367 | Msa0310850:CDS |
| TTCAATTCAAGTAGAAAAGT+TGG | 0.404711 | 2_4:-5656725 | Msa0310850:CDS |
| CGAACAAGATAATCAGGAAC+TGG | 0.408736 | 2_4:-5657916 | Msa0310850:CDS |
| AGAGACTCTTGTGAAGGAAA+TGG | 0.412634 | 2_4:-5657958 | Msa0310850:CDS |
| AGAAATGCTAAAAGATGAAA+TGG | 0.417820 | 2_4:-5657307 | Msa0310850:CDS |
| GGAAAAGGAGAGATCTTTGC+TGG | 0.425601 | 2_4:-5658243 | Msa0310850:CDS |
| TTCAATATGATTCTCTTCAA+TGG | 0.428669 | 2_4:+5657635 | None:intergenic |
| TCCCAACGAGTTTCTTAGCT+CGG | 0.428727 | 2_4:+5657986 | None:intergenic |
| TCTCCTCGAACAAGATAATC+AGG | 0.434623 | 2_4:-5657922 | Msa0310850:CDS |
| AGAGGATGTGATAATGCAAT+TGG | 0.440594 | 2_4:-5658381 | Msa0310850:CDS |
| GTTCCTGATTATCTTGTTCG+AGG | 0.446067 | 2_4:+5657919 | None:intergenic |
| GAAGCAGTTTCAGTTATCAT+TGG | 0.450748 | 2_4:-5656536 | Msa0310850:CDS |
| GAACACAAGAATAATTAAAT+CGG | 0.451478 | 2_4:-5656632 | Msa0310850:CDS |
| AAATCATTCGGTACAGAAAC+CGG | 0.453233 | 2_4:-5657567 | Msa0310850:CDS |
| AAGAATAATTAAATCGGAAT+CGG | 0.453567 | 2_4:-5656626 | Msa0310850:CDS |
| TCGGGAGCTTCAGATAGAAC+TGG | 0.455342 | 2_4:-5657673 | Msa0310850:CDS |
| GCAGAGATCAAGTTTGAGAA+TGG | 0.464186 | 2_4:-5656451 | Msa0310850:CDS |
| CAACAAAGAACAAGAAATTC+GGG | 0.466336 | 2_4:-5657691 | Msa0310850:CDS |
| TCGCAACAAGCTTAGAAAGT+TGG | 0.468239 | 2_4:-5657823 | Msa0310850:CDS |
| TCAAGTCCAAAGAATCTCAA+TGG | 0.470626 | 2_4:-5657770 | Msa0310850:CDS |
| TCAAGCTAGGTTTGCTGAGA+GGG | 0.471672 | 2_4:-5658600 | Msa0310850:CDS |
| TAGATTGTGAAGCGCGGCAT+TGG | 0.474272 | 2_4:-5657257 | Msa0310850:CDS |
| TCTCTGCATTGTCAAGGATC+AGG | 0.476260 | 2_4:-5657109 | Msa0310850:CDS |
| GAGAGCTAAGCAAGCGAAGA+CGG | 0.476465 | 2_4:-5658414 | Msa0310850:CDS |
| AGATAGAAGAGTTGACCGTT+CGG | 0.480769 | 2_4:-5658025 | Msa0310850:CDS |
| GGATTCTCAGACAAGAACTT+TGG | 0.486530 | 2_4:-5658189 | Msa0310850:CDS |
| GAGCAAGGAGGAGTGGGAAA+AGG | 0.488727 | 2_4:-5658258 | Msa0310850:CDS |
| GAAGAAGTGTATTGAGGCTG+AGG | 0.493672 | 2_4:-5658438 | Msa0310850:CDS |
| GAAGATCTTCCTCCTGCTGA+AGG | 0.497924 | 2_4:+5656848 | None:intergenic |
| CAGCCAATAACAACGACTTA+AGG | 0.506636 | 2_4:+5658465 | None:intergenic |
| TCAGTTATCATTGGAAGCCA+TGG | 0.506820 | 2_4:-5656527 | Msa0310850:CDS |
| GACGAATGAAAAGCAGAAGA+TGG | 0.508341 | 2_4:-5656485 | Msa0310850:CDS |
| CAAGTCCAAAGAATCTCAAT+GGG | 0.511165 | 2_4:-5657769 | Msa0310850:CDS |
| TCTGCTCAAGATGGTGCAAA+TGG | 0.511603 | 2_4:-5656250 | Msa0310850:CDS |
| TGTAGTTTCTCGAAGTTGCT+CGG | 0.513376 | 2_4:+5658766 | None:intergenic |
| GGAGGGAAGTAATAGTGAGT+TGG | 0.514949 | 2_4:-5658567 | Msa0310850:CDS |
| TGAACTTGTCCAAACAATGA+TGG | 0.515353 | 2_4:-5656989 | Msa0310850:CDS |
| GGATGTGATAATGCAATTGG+AGG | 0.515665 | 2_4:-5658378 | Msa0310850:CDS |
| AAAGTTGGTTGAGGTTAGCA+TGG | 0.517141 | 2_4:-5656710 | Msa0310850:CDS |
| GCAGTTTGTGTCAAAGAGAA+TGG | 0.518499 | 2_4:-5657540 | Msa0310850:CDS |
| CTCAAATACGTGGCGCGGGA+GGG | 0.518796 | 2_4:-5657866 | Msa0310850:CDS |
| TGAGAGGGTGTTCAAATTGG+AGG | 0.521099 | 2_4:-5658585 | Msa0310850:CDS |
| AGCCGAGCTAAGAAACTCGT+TGG | 0.526234 | 2_4:-5657988 | Msa0310850:CDS |
| ATCATTGGAAGCCATGGAGT+TGG | 0.526584 | 2_4:-5656521 | Msa0310850:CDS |
| TTACAAAGTTATCGACAGAA+AGG | 0.528275 | 2_4:-5656411 | Msa0310850:CDS |
| GATGCTTACTCCAAATCATT+CGG | 0.529962 | 2_4:-5657579 | Msa0310850:CDS |
| GACAGAAAGGGAAGATATGT+TGG | 0.530584 | 2_4:-5656398 | Msa0310850:CDS |
| GCTCAAATACGTGGCGCGGG+AGG | 0.532341 | 2_4:-5657867 | Msa0310850:CDS |
| GAATGAGCAAGCCCTTAAGC+TGG | 0.532831 | 2_4:-5657145 | Msa0310850:CDS |
| GGATTGTCAGATAGCAAAGA+TGG | 0.533960 | 2_4:-5657748 | Msa0310850:CDS |
| CAACAAGCTTAGAAAGTTGG+AGG | 0.534255 | 2_4:-5657820 | Msa0310850:CDS |
| TCTCAGACAAGAACTTTGGA+AGG | 0.535844 | 2_4:-5658185 | Msa0310850:CDS |
| TTCAAGCTAGGTTTGCTGAG+AGG | 0.540809 | 2_4:-5658601 | Msa0310850:CDS |
| GATCCTTGACAATGCAGAGA+AGG | 0.541024 | 2_4:+5657112 | None:intergenic |
| GCCGAGCTAAGAAACTCGTT+GGG | 0.541330 | 2_4:-5657987 | Msa0310850:CDS |
| TACAAAGTTATCGACAGAAA+GGG | 0.541451 | 2_4:-5656410 | Msa0310850:CDS |
| CTCAGACAAGAACTTTGGAA+GGG | 0.541545 | 2_4:-5658184 | Msa0310850:CDS |
| CTCAAAACTAGTCTTGAACT+CGG | 0.542319 | 2_4:+5658082 | None:intergenic |
| GTATCCTATCAAGAAATTCA+GGG | 0.543754 | 2_4:-5657210 | Msa0310850:CDS |
| TCAAGTAGAAAAGTTGGTTG+AGG | 0.545469 | 2_4:-5656719 | Msa0310850:CDS |
| AGCAGAACTCGAGAAGCTTA+GGG | 0.546789 | 2_4:-5658840 | Msa0310850:CDS |
| GGAAACTTCTCTTCTGTCAC+GGG | 0.547308 | 2_4:-5657172 | Msa0310850:CDS |
| TCAGGGAACCTGTAAAGAGA+TGG | 0.553024 | 2_4:-5657193 | Msa0310850:CDS |
| GTAGTTTGTGATAATCTACA+TGG | 0.554725 | 2_4:-5656274 | Msa0310850:CDS |
| AAGGAGAGATCTTTGCTGGT+TGG | 0.554797 | 2_4:-5658239 | Msa0310850:CDS |
| TGGCTCGCGAAGAAAGTAAG+AGG | 0.555018 | 2_4:-5658127 | Msa0310850:CDS |
| TTGCTTGAGGAATCATCTGC+AGG | 0.557828 | 2_4:-5657408 | Msa0310850:CDS |
| TGGAAACTTCTCTTCTGTCA+CGG | 0.558765 | 2_4:-5657173 | Msa0310850:CDS |
| AGAATAACAAGATTCAAGCT+AGG | 0.559756 | 2_4:-5658613 | Msa0310850:CDS |
| CAAGGATCAGGAGAGAGATA+CGG | 0.561257 | 2_4:-5657097 | Msa0310850:CDS |
| CTACATGGTTCTGCTCAAGA+TGG | 0.561420 | 2_4:-5656259 | Msa0310850:CDS |
| TTCGATCGAGCAAGGAGGAG+TGG | 0.561741 | 2_4:-5658265 | Msa0310850:CDS |
| GAAGCTCAAATACGTGGCGC+GGG | 0.563592 | 2_4:-5657870 | Msa0310850:CDS |
| CTCTTGTGAAGGAAATGGAA+AGG | 0.565165 | 2_4:-5657953 | Msa0310850:CDS |
| TCGATCGAGCAAGGAGGAGT+GGG | 0.570348 | 2_4:-5658264 | Msa0310850:CDS |
| GAAAGAGCAGCTCTTGCAGA+TGG | 0.574508 | 2_4:-5657373 | Msa0310850:CDS |
| AGAATCCAAACTCATTTGCA+AGG | 0.578928 | 2_4:+5658205 | None:intergenic |
| CTGACTTGAGATCGAGCTCA+CGG | 0.580025 | 2_4:+5658723 | None:intergenic |
| TGAACTGAAGAGAATTAATG+AGG | 0.582035 | 2_4:-5658690 | Msa0310850:CDS |
| AGATCAGTTTCGATCGAGCA+AGG | 0.582339 | 2_4:-5658273 | Msa0310850:CDS |
| AAACCTTCTCTGCATTGTCA+AGG | 0.582460 | 2_4:-5657115 | Msa0310850:CDS |
| AAGATCTTCCTCCTGCTGAA+GGG | 0.590521 | 2_4:+5656849 | None:intergenic |
| TGACTTGAGATCGAGCTCAC+GGG | 0.590922 | 2_4:+5658724 | None:intergenic |
| TGTCCAAACAATGATGGAGA+AGG | 0.591175 | 2_4:-5656983 | Msa0310850:CDS |
| GTAAAGCTATCTGCAGCTGA+AGG | 0.592450 | 2_4:+5657070 | None:intergenic |
| AATTGGTGATTTGTCTAGTG+AGG | 0.592985 | 2_4:-5656350 | Msa0310850:CDS |
| TGATGAAAATGAAACAGCAA+TGG | 0.595687 | 2_4:-5656302 | Msa0310850:CDS |
| GAGAGGGTGTTCAAATTGGA+GGG | 0.595884 | 2_4:-5658584 | Msa0310850:CDS |
| AAACTGTTAACCTCTCTCAA+TGG | 0.596687 | 2_4:+5656172 | None:intergenic |
| AAAGAAAGAGACTCTTGTGA+AGG | 0.601023 | 2_4:-5657964 | Msa0310850:CDS |
| GAATGTTTGTGAAAGTAGCG+AGG | 0.601228 | 2_4:-5658498 | Msa0310850:CDS |
| AGAAGCTCAAATACGTGGCG+CGG | 0.605914 | 2_4:-5657871 | Msa0310850:CDS |
| CTCAATTAGATTGTGAAGCG+CGG | 0.607051 | 2_4:-5657263 | Msa0310850:CDS |
| GAGCCTGAAGCAAGAGTCCA+TGG | 0.607550 | 2_4:-5656920 | Msa0310850:CDS |
| CTCTTGCTTCAGGCTCGCAA+CGG | 0.609523 | 2_4:+5656927 | None:intergenic |
| TGGGCGATTGCCATTGAGAG+AGG | 0.610783 | 2_4:-5656182 | Msa0310850:CDS |
| TGAGGTTAGCATGGTTACAG+AGG | 0.611718 | 2_4:-5656701 | Msa0310850:CDS |
| ACAACAGAAGAAATTGCTTG+AGG | 0.618482 | 2_4:-5657421 | Msa0310850:CDS |
| CAAGCTTAGAAAGTTGGAGG+AGG | 0.618855 | 2_4:-5657817 | Msa0310850:CDS |
| TGCTGAGAAGAAGTGTATTG+AGG | 0.629290 | 2_4:-5658444 | Msa0310850:CDS |
| TGAGCTCGATCTCAAGTCAG+AGG | 0.648732 | 2_4:-5658720 | Msa0310850:CDS |
| GAACAAGATAATCAGGAACT+GGG | 0.653060 | 2_4:-5657915 | Msa0310850:CDS |
| TATCTCATCATTCCTCCGAA+CGG | 0.657829 | 2_4:+5658010 | None:intergenic |
| TAGAAGAGTTGACCGTTCGG+AGG | 0.660586 | 2_4:-5658022 | Msa0310850:CDS |
| CTGTAATGCAGAGAAAACAA+AGG | 0.674955 | 2_4:-5657040 | Msa0310850:CDS |
| TTTAGAGAAGCTCAAATACG+TGG | 0.703819 | 2_4:-5657876 | Msa0310850:CDS |
| GAAGACGGTGAAATTAAGAG+AGG | 0.704691 | 2_4:-5658399 | Msa0310850:CDS |
| TCAGTTTCGATCGAGCAAGG+AGG | 0.724053 | 2_4:-5658270 | Msa0310850:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTCTTCAATTTTTTTATTTG+TGG | + | chr2_4:5658830-5658849 | None:intergenic | 15.0% |
| !!! | AAAATTGAAGAAAATTTTGA+TGG | - | chr2_4:5658838-5658857 | Msa0310850:CDS | 15.0% |
| !!! | AAATTGAAGAAAATTTTGAT+GGG | - | chr2_4:5658839-5658858 | Msa0310850:CDS | 15.0% |
| !!! | AACTTTTCTTTCATGTTTTA+GGG | + | chr2_4:5657699-5657718 | None:intergenic | 20.0% |
| !! | GAACACAAGAATAATTAAAT+CGG | - | chr2_4:5658408-5658427 | Msa0310850:CDS | 20.0% |
| !! | AAGAATAATTAAATCGGAAT+CGG | - | chr2_4:5658414-5658433 | Msa0310850:CDS | 20.0% |
| !!! | TAAAAGTTTTCTTGAGAATT+TGG | - | chr2_4:5658441-5658460 | Msa0310850:CDS | 20.0% |
| !!! | TCAATTTTTTTATTTGTGGA+AGG | + | chr2_4:5658826-5658845 | None:intergenic | 20.0% |
| ! | GTACATTGTGCATTTAAATT+CGG | - | chr2_4:5656404-5656423 | Msa0310850:CDS | 25.0% |
| ! | CTGTGCAAGATAAAATTAAA+TGG | - | chr2_4:5656697-5656716 | Msa0310850:CDS | 25.0% |
| ! | TTCAATATGATTCTCTTCAA+TGG | + | chr2_4:5657408-5657427 | None:intergenic | 25.0% |
| ! | AGACAATTCTCTAAACAATA+TGG | - | chr2_4:5657562-5657581 | Msa0310850:CDS | 25.0% |
| !! | CAACTTTTCTTTCATGTTTT+AGG | + | chr2_4:5657700-5657719 | None:intergenic | 25.0% |
| ! | AGAAATGCTAAAAGATGAAA+TGG | - | chr2_4:5657733-5657752 | Msa0310850:CDS | 25.0% |
| !! | ATCTTCTAATTCTTTTTCCA+TGG | + | chr2_4:5658140-5658159 | None:intergenic | 25.0% |
| ! | AATTGAAAAAGAGAAACACA+GGG | + | chr2_4:5658302-5658321 | None:intergenic | 25.0% |
| ! | TTCAATTCAAGTAGAAAAGT+TGG | - | chr2_4:5658315-5658334 | Msa0310850:CDS | 25.0% |
| TGAACTGAAGAGAATTAATG+AGG | - | chr2_4:5656350-5656369 | Msa0310850:CDS | 30.0% | |
| AGAATAACAAGATTCAAGCT+AGG | - | chr2_4:5656427-5656446 | Msa0310850:CDS | 30.0% | |
| !!! | AAGTAATAGTGAGTTGGTTT+TGG | - | chr2_4:5656479-5656498 | Msa0310850:CDS | 30.0% |
| !!! | ACTAGTTTTGAGGATGTTTA+TGG | - | chr2_4:5656969-5656988 | Msa0310850:CDS | 30.0% |
| CCAACAAAGAACAAGAAATT+CGG | - | chr2_4:5657348-5657367 | Msa0310850:CDS | 30.0% | |
| CAACAAAGAACAAGAAATTC+GGG | - | chr2_4:5657349-5657368 | Msa0310850:CDS | 30.0% | |
| ACAAAAACAATTTCTGTTGG+AGG | - | chr2_4:5657586-5657605 | Msa0310850:CDS | 30.0% | |
| TGAAAGAAAAGTTGCATTTG+AGG | - | chr2_4:5657706-5657725 | Msa0310850:CDS | 30.0% | |
| AGATAGTTCATCATTCTTAC+TGG | + | chr2_4:5657759-5657778 | None:intergenic | 30.0% | |
| AGTATCCTATCAAGAAATTC+AGG | - | chr2_4:5657829-5657848 | Msa0310850:CDS | 30.0% | |
| GTATCCTATCAAGAAATTCA+GGG | - | chr2_4:5657830-5657849 | Msa0310850:CDS | 30.0% | |
| ! | TTTTTCTTGCCTAAATCTCT+CGG | + | chr2_4:5658029-5658048 | None:intergenic | 30.0% |
| ! | TGAAACTATAAAGCACTTTC+AGG | - | chr2_4:5658240-5658259 | Msa0310850:CDS | 30.0% |
| !!! | AGCATCAGAACAAGATTTTT+TGG | - | chr2_4:5658273-5658292 | Msa0310850:CDS | 30.0% |
| !!! | ATCAGAACAAGATTTTTTGG+AGG | - | chr2_4:5658276-5658295 | Msa0310850:CDS | 30.0% |
| GAATTGAAAAAGAGAAACAC+AGG | + | chr2_4:5658303-5658322 | None:intergenic | 30.0% | |
| !!! | CTTCAATTTCTAGTTTTGTC+AGG | + | chr2_4:5658384-5658403 | None:intergenic | 30.0% |
| !!! | CTTCGCTTCATGTTTTAAAA+GGG | + | chr2_4:5658488-5658507 | None:intergenic | 30.0% |
| TTACAAAGTTATCGACAGAA+AGG | - | chr2_4:5658629-5658648 | Msa0310850:CDS | 30.0% | |
| TACAAAGTTATCGACAGAAA+GGG | - | chr2_4:5658630-5658649 | Msa0310850:CDS | 30.0% | |
| GAGTACATCTATGACAAAAT+TGG | - | chr2_4:5658673-5658692 | Msa0310850:CDS | 30.0% | |
| TGATGAAAATGAAACAGCAA+TGG | - | chr2_4:5658738-5658757 | Msa0310850:CDS | 30.0% | |
| ! | GTAGTTTGTGATAATCTACA+TGG | - | chr2_4:5658766-5658785 | Msa0310850:CDS | 30.0% |
| !!! | CGATTTGTTGTGTTTTGACT+CGG | + | chr2_4:5656233-5656252 | None:intergenic | 35.0% |
| TACTGCTAGAAACAGTTGTT+TGG | - | chr2_4:5656515-5656534 | Msa0310850:CDS | 35.0% | |
| ! | AGAGGATGTGATAATGCAAT+TGG | - | chr2_4:5656659-5656678 | Msa0310850:CDS | 35.0% |
| ATCTTCCTTGCAAATGAGTT+TGG | - | chr2_4:5656830-5656849 | Msa0310850:CDS | 35.0% | |
| AGAATCCAAACTCATTTGCA+AGG | + | chr2_4:5656838-5656857 | None:intergenic | 35.0% | |
| ! | AGAAAGTAAGAGGAAGCTTT+TGG | - | chr2_4:5656923-5656942 | Msa0310850:CDS | 35.0% |
| !! | CTCAAAACTAGTCTTGAACT+CGG | + | chr2_4:5656961-5656980 | None:intergenic | 35.0% |
| AAAGAAAGAGACTCTTGTGA+AGG | - | chr2_4:5657076-5657095 | Msa0310850:CDS | 35.0% | |
| GAACAAGATAATCAGGAACT+GGG | - | chr2_4:5657125-5657144 | Msa0310850:CDS | 35.0% | |
| TTTAGAGAAGCTCAAATACG+TGG | - | chr2_4:5657164-5657183 | Msa0310850:CDS | 35.0% | |
| TCAAGTCCAAAGAATCTCAA+TGG | - | chr2_4:5657270-5657289 | Msa0310850:CDS | 35.0% | |
| CAAGTCCAAAGAATCTCAAT+GGG | - | chr2_4:5657271-5657290 | Msa0310850:CDS | 35.0% | |
| ACAATCCCATTGAGATTCTT+TGG | + | chr2_4:5657279-5657298 | None:intergenic | 35.0% | |
| AAGATGGAAGCAGATGTTAT+TGG | - | chr2_4:5657308-5657327 | Msa0310850:CDS | 35.0% | |
| CCGAATTTCTTGTTCTTTGT+TGG | + | chr2_4:5657351-5657370 | None:intergenic | 35.0% | |
| GATGCTTACTCCAAATCATT+CGG | - | chr2_4:5657461-5657480 | Msa0310850:CDS | 35.0% | |
| AAATCATTCGGTACAGAAAC+CGG | - | chr2_4:5657473-5657492 | Msa0310850:CDS | 35.0% | |
| TTTGACACAAACTGCTTTAC+CGG | + | chr2_4:5657495-5657514 | None:intergenic | 35.0% | |
| GGCACAAAAACAATTTCTGT+TGG | - | chr2_4:5657583-5657602 | Msa0310850:CDS | 35.0% | |
| ACAACAGAAGAAATTGCTTG+AGG | - | chr2_4:5657619-5657638 | Msa0310850:CDS | 35.0% | |
| AGAAGTTTCCATCTCTTTAC+AGG | + | chr2_4:5657858-5657877 | None:intergenic | 35.0% | |
| ! | GTTTTTGTTCTCCAGCTTAA+GGG | + | chr2_4:5657909-5657928 | None:intergenic | 35.0% |
| !!! | CTTTGTTTTCTCTGCATTAC+AGG | + | chr2_4:5658002-5658021 | None:intergenic | 35.0% |
| CTGTAATGCAGAGAAAACAA+AGG | - | chr2_4:5658000-5658019 | Msa0310850:CDS | 35.0% | |
| TGAACTTGTCCAAACAATGA+TGG | - | chr2_4:5658051-5658070 | Msa0310850:CDS | 35.0% | |
| AATCCTTCTCCATCATTGTT+TGG | + | chr2_4:5658063-5658082 | None:intergenic | 35.0% | |
| ! | TCAAGTAGAAAAGTTGGTTG+AGG | - | chr2_4:5658321-5658340 | Msa0310850:CDS | 35.0% |
| ! | TTTTCTTGAGAATTTGGCAC+AGG | - | chr2_4:5658447-5658466 | Msa0310850:CDS | 35.0% |
| !! | GCTTCGCTTCATGTTTTAAA+AGG | + | chr2_4:5658489-5658508 | None:intergenic | 35.0% |
| GAAGCAGTTTCAGTTATCAT+TGG | - | chr2_4:5658504-5658523 | Msa0310850:CDS | 35.0% | |
| !!! | CTTTTTAGTTTCCAACTCCA+TGG | + | chr2_4:5658533-5658552 | None:intergenic | 35.0% |
| ! | AATTGGTGATTTGTCTAGTG+AGG | - | chr2_4:5658690-5658709 | Msa0310850:CDS | 35.0% |
| AAACTGTTAACCTCTCTCAA+TGG | + | chr2_4:5658871-5658890 | None:intergenic | 35.0% | |
| TGTAGTTTCTCGAAGTTGCT+CGG | + | chr2_4:5656277-5656296 | None:intergenic | 40.0% | |
| !!! | TAGTGAGTTGGTTTTGGCTT+TGG | - | chr2_4:5656485-5656504 | Msa0310850:CDS | 40.0% |
| GAATGTTTGTGAAAGTAGCG+AGG | - | chr2_4:5656542-5656561 | Msa0310850:CDS | 40.0% | |
| GCACCTTAAGTCGTTGTTAT+TGG | - | chr2_4:5656572-5656591 | Msa0310850:CDS | 40.0% | |
| CAGCCAATAACAACGACTTA+AGG | + | chr2_4:5656578-5656597 | None:intergenic | 40.0% | |
| ! | TGCTGAGAAGAAGTGTATTG+AGG | - | chr2_4:5656596-5656615 | Msa0310850:CDS | 40.0% |
| GAAGACGGTGAAATTAAGAG+AGG | - | chr2_4:5656641-5656660 | Msa0310850:CDS | 40.0% | |
| ! | GGATGTGATAATGCAATTGG+AGG | - | chr2_4:5656662-5656681 | Msa0310850:CDS | 40.0% |
| GGATTCTCAGACAAGAACTT+TGG | - | chr2_4:5656851-5656870 | Msa0310850:CDS | 40.0% | |
| TCTCAGACAAGAACTTTGGA+AGG | - | chr2_4:5656855-5656874 | Msa0310850:CDS | 40.0% | |
| ! | CTCAGACAAGAACTTTGGAA+GGG | - | chr2_4:5656856-5656875 | Msa0310850:CDS | 40.0% |
| CGAGATGTGTAATCATGCTT+TGG | - | chr2_4:5656893-5656912 | Msa0310850:CDS | 40.0% | |
| ! | AAGTAAGAGGAAGCTTTTGG+AGG | - | chr2_4:5656926-5656945 | Msa0310850:CDS | 40.0% |
| !!! | CGAGTTCAAGACTAGTTTTG+AGG | - | chr2_4:5656959-5656978 | Msa0310850:CDS | 40.0% |
| AGATAGAAGAGTTGACCGTT+CGG | - | chr2_4:5657015-5657034 | Msa0310850:CDS | 40.0% | |
| TATCTCATCATTCCTCCGAA+CGG | + | chr2_4:5657033-5657052 | None:intergenic | 40.0% | |
| AGAGACTCTTGTGAAGGAAA+TGG | - | chr2_4:5657082-5657101 | Msa0310850:CDS | 40.0% | |
| CTCTTGTGAAGGAAATGGAA+AGG | - | chr2_4:5657087-5657106 | Msa0310850:CDS | 40.0% | |
| TCTCCTCGAACAAGATAATC+AGG | - | chr2_4:5657118-5657137 | Msa0310850:CDS | 40.0% | |
| GTTCCTGATTATCTTGTTCG+AGG | + | chr2_4:5657124-5657143 | None:intergenic | 40.0% | |
| CGAACAAGATAATCAGGAAC+TGG | - | chr2_4:5657124-5657143 | Msa0310850:CDS | 40.0% | |
| TCGCAACAAGCTTAGAAAGT+TGG | - | chr2_4:5657217-5657236 | Msa0310850:CDS | 40.0% | |
| CAACAAGCTTAGAAAGTTGG+AGG | - | chr2_4:5657220-5657239 | Msa0310850:CDS | 40.0% | |
| GGATTGTCAGATAGCAAAGA+TGG | - | chr2_4:5657292-5657311 | Msa0310850:CDS | 40.0% | |
| GGTTTCTGTACCGAATGATT+TGG | + | chr2_4:5657474-5657493 | None:intergenic | 40.0% | |
| GCAGTTTGTGTCAAAGAGAA+TGG | - | chr2_4:5657500-5657519 | Msa0310850:CDS | 40.0% | |
| CTCAATTAGATTGTGAAGCG+CGG | - | chr2_4:5657777-5657796 | Msa0310850:CDS | 40.0% | |
| GGTTCCCTGAATTTCTTGAT+AGG | + | chr2_4:5657837-5657856 | None:intergenic | 40.0% | |
| TGGAAACTTCTCTTCTGTCA+CGG | - | chr2_4:5657867-5657886 | Msa0310850:CDS | 40.0% | |
| ! | GGTTTTTGTTCTCCAGCTTA+AGG | + | chr2_4:5657910-5657929 | None:intergenic | 40.0% |
| AAACCTTCTCTGCATTGTCA+AGG | - | chr2_4:5657925-5657944 | Msa0310850:CDS | 40.0% | |
| ! | TGTCCAAACAATGATGGAGA+AGG | - | chr2_4:5658057-5658076 | Msa0310850:CDS | 40.0% |
| ! | AAAGTTGGTTGAGGTTAGCA+TGG | - | chr2_4:5658330-5658349 | Msa0310850:CDS | 40.0% |
| TCAGTTATCATTGGAAGCCA+TGG | - | chr2_4:5658513-5658532 | Msa0310850:CDS | 40.0% | |
| GACGAATGAAAAGCAGAAGA+TGG | - | chr2_4:5658555-5658574 | Msa0310850:CDS | 40.0% | |
| GCAGAGATCAAGTTTGAGAA+TGG | - | chr2_4:5658589-5658608 | Msa0310850:CDS | 40.0% | |
| GACAGAAAGGGAAGATATGT+TGG | - | chr2_4:5658642-5658661 | Msa0310850:CDS | 40.0% | |
| AAGCAGAACTCGAGAAGCTT+AGG | - | chr2_4:5656199-5656218 | Msa0310850:CDS | 45.0% | |
| AGCAGAACTCGAGAAGCTTA+GGG | - | chr2_4:5656200-5656219 | Msa0310850:CDS | 45.0% | |
| !! | TTCAAGCTAGGTTTGCTGAG+AGG | - | chr2_4:5656439-5656458 | Msa0310850:CDS | 45.0% |
| !! | TCAAGCTAGGTTTGCTGAGA+GGG | - | chr2_4:5656440-5656459 | Msa0310850:CDS | 45.0% |
| !! | TGCTGAGAGGGTGTTCAAAT+TGG | - | chr2_4:5656452-5656471 | Msa0310850:CDS | 45.0% |
| !! | TGAGAGGGTGTTCAAATTGG+AGG | - | chr2_4:5656455-5656474 | Msa0310850:CDS | 45.0% |
| !! | GAGAGGGTGTTCAAATTGGA+GGG | - | chr2_4:5656456-5656475 | Msa0310850:CDS | 45.0% |
| GGAGGGAAGTAATAGTGAGT+TGG | - | chr2_4:5656473-5656492 | Msa0310850:CDS | 45.0% | |
| ! | GAAGAAGTGTATTGAGGCTG+AGG | - | chr2_4:5656602-5656621 | Msa0310850:CDS | 45.0% |
| AGATCAGTTTCGATCGAGCA+AGG | - | chr2_4:5656767-5656786 | Msa0310850:CDS | 45.0% | |
| GGAAAAGGAGAGATCTTTGC+TGG | - | chr2_4:5656797-5656816 | Msa0310850:CDS | 45.0% | |
| AAGGAGAGATCTTTGCTGGT+TGG | - | chr2_4:5656801-5656820 | Msa0310850:CDS | 45.0% | |
| TCCCAACGAGTTTCTTAGCT+CGG | + | chr2_4:5657057-5657076 | None:intergenic | 45.0% | |
| CAAGCTTAGAAAGTTGGAGG+AGG | - | chr2_4:5657223-5657242 | Msa0310850:CDS | 45.0% | |
| TTGCTTGAGGAATCATCTGC+AGG | - | chr2_4:5657632-5657651 | Msa0310850:CDS | 45.0% | |
| TCAGGGAACCTGTAAAGAGA+TGG | - | chr2_4:5657847-5657866 | Msa0310850:CDS | 45.0% | |
| GGAAACTTCTCTTCTGTCAC+GGG | - | chr2_4:5657868-5657887 | Msa0310850:CDS | 45.0% | |
| GATCCTTGACAATGCAGAGA+AGG | + | chr2_4:5657931-5657950 | None:intergenic | 45.0% | |
| TCTCTGCATTGTCAAGGATC+AGG | - | chr2_4:5657931-5657950 | Msa0310850:CDS | 45.0% | |
| CAAGGATCAGGAGAGAGATA+CGG | - | chr2_4:5657943-5657962 | Msa0310850:CDS | 45.0% | |
| GTAAAGCTATCTGCAGCTGA+AGG | + | chr2_4:5657973-5657992 | None:intergenic | 45.0% | |
| ! | TCAGCTGCAGATAGCTTTAC+TGG | - | chr2_4:5657973-5657992 | Msa0310850:CDS | 45.0% |
| CAAAGGAAGCCGAGAGATTT+AGG | - | chr2_4:5658017-5658036 | Msa0310850:CDS | 45.0% | |
| TTTCCATGGACTCTTGCTTC+AGG | + | chr2_4:5658126-5658145 | None:intergenic | 45.0% | |
| AAGATCTTCCTCCTGCTGAA+GGG | + | chr2_4:5658194-5658213 | None:intergenic | 45.0% | |
| AGCAGGAGGAAGATCTTCTT+TGG | - | chr2_4:5658197-5658216 | Msa0310850:CDS | 45.0% | |
| TGAGGTTAGCATGGTTACAG+AGG | - | chr2_4:5658339-5658358 | Msa0310850:CDS | 45.0% | |
| ATCATTGGAAGCCATGGAGT+TGG | - | chr2_4:5658519-5658538 | Msa0310850:CDS | 45.0% | |
| ! | CTACATGGTTCTGCTCAAGA+TGG | - | chr2_4:5658781-5658800 | Msa0310850:CDS | 45.0% |
| TCTGCTCAAGATGGTGCAAA+TGG | - | chr2_4:5658790-5658809 | Msa0310850:CDS | 45.0% | |
| TGACTTGAGATCGAGCTCAC+GGG | + | chr2_4:5656319-5656338 | None:intergenic | 50.0% | |
| ! | CTGACTTGAGATCGAGCTCA+CGG | + | chr2_4:5656320-5656339 | None:intergenic | 50.0% |
| TGAGCTCGATCTCAAGTCAG+AGG | - | chr2_4:5656320-5656339 | Msa0310850:CDS | 50.0% | |
| GAGAGCTAAGCAAGCGAAGA+CGG | - | chr2_4:5656626-5656645 | Msa0310850:CDS | 50.0% | |
| TCAGTTTCGATCGAGCAAGG+AGG | - | chr2_4:5656770-5656789 | Msa0310850:CDS | 50.0% | |
| TGGCTCGCGAAGAAAGTAAG+AGG | - | chr2_4:5656913-5656932 | Msa0310850:CDS | 50.0% | |
| TAGAAGAGTTGACCGTTCGG+AGG | - | chr2_4:5657018-5657037 | Msa0310850:CDS | 50.0% | |
| AGCCGAGCTAAGAAACTCGT+TGG | - | chr2_4:5657052-5657071 | Msa0310850:CDS | 50.0% | |
| GCCGAGCTAAGAAACTCGTT+GGG | - | chr2_4:5657053-5657072 | Msa0310850:CDS | 50.0% | |
| AGAAGCTCAAATACGTGGCG+CGG | - | chr2_4:5657169-5657188 | Msa0310850:CDS | 50.0% | |
| TCGGGAGCTTCAGATAGAAC+TGG | - | chr2_4:5657367-5657386 | Msa0310850:CDS | 50.0% | |
| GAAAGAGCAGCTCTTGCAGA+TGG | - | chr2_4:5657667-5657686 | Msa0310850:CDS | 50.0% | |
| TAGATTGTGAAGCGCGGCAT+TGG | - | chr2_4:5657783-5657802 | Msa0310850:CDS | 50.0% | |
| GAATGAGCAAGCCCTTAAGC+TGG | - | chr2_4:5657895-5657914 | Msa0310850:CDS | 50.0% | |
| TGCACAAAAAGCCCTTCAGC+AGG | - | chr2_4:5658180-5658199 | Msa0310850:CDS | 50.0% | |
| ACAAAAAGCCCTTCAGCAGG+AGG | - | chr2_4:5658183-5658202 | Msa0310850:CDS | 50.0% | |
| GAAGATCTTCCTCCTGCTGA+AGG | + | chr2_4:5658195-5658214 | None:intergenic | 50.0% | |
| TTCGATCGAGCAAGGAGGAG+TGG | - | chr2_4:5656775-5656794 | Msa0310850:CDS | 55.0% | |
| TCGATCGAGCAAGGAGGAGT+GGG | - | chr2_4:5656776-5656795 | Msa0310850:CDS | 55.0% | |
| GAGCAAGGAGGAGTGGGAAA+AGG | - | chr2_4:5656782-5656801 | Msa0310850:CDS | 55.0% | |
| GAAGCTCAAATACGTGGCGC+GGG | - | chr2_4:5657170-5657189 | Msa0310850:CDS | 55.0% | |
| CTCTTGCTTCAGGCTCGCAA+CGG | + | chr2_4:5658116-5658135 | None:intergenic | 55.0% | |
| GAGCCTGAAGCAAGAGTCCA+TGG | - | chr2_4:5658120-5658139 | Msa0310850:CDS | 55.0% | |
| TGGGCGATTGCCATTGAGAG+AGG | - | chr2_4:5658858-5658877 | Msa0310850:CDS | 55.0% | |
| CTCAAATACGTGGCGCGGGA+GGG | - | chr2_4:5657174-5657193 | Msa0310850:CDS | 60.0% | |
| GCTCAAATACGTGGCGCGGG+AGG | - | chr2_4:5657173-5657192 | Msa0310850:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_4 | gene | 5656162 | 5658900 | 5656162 | ID=Msa0310850;Name=Msa0310850 |
| chr2_4 | mRNA | 5656162 | 5658900 | 5656162 | ID=Msa0310850-mRNA-1;Parent=Msa0310850;Name=Msa0310850-mRNA-1;_AED=0.07;_eAED=0.07;_QI=0|-1|0|1|-1|1|1|0|912 |
| chr2_4 | exon | 5656162 | 5658900 | 5656162 | ID=Msa0310850-mRNA-1:exon:2131;Parent=Msa0310850-mRNA-1 |
| chr2_4 | CDS | 5656162 | 5658900 | 5656162 | ID=Msa0310850-mRNA-1:cds;Parent=Msa0310850-mRNA-1 |
| Gene Sequence |
| Protein sequence |
