AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0942240

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942240 MtrunA17_Chr6g0458271 97.452 157 4 0 1 157 1 157 6.43e-111 311
Msa0942240 MtrunA17_Chr6g0458281 87.975 158 14 3 1 157 1 154 1.63e-92 265
Msa0942240 MtrunA17_Chr6g0473621 41.379 145 77 4 19 155 11 155 1.37e-27 105
Msa0942240 MtrunA17_Chr7g0243051 46.296 108 55 1 32 136 13 120 1.56e-26 99.8
Msa0942240 MtrunA17_Chr1g0203771 43.519 108 57 2 37 140 21 128 9.27e-25 97.4
Msa0942240 MtrunA17_Chr2g0285591 37.500 128 72 2 33 152 25 152 1.17e-23 92.8
Msa0942240 MtrunA17_Chr4g0057261 43.810 105 57 1 38 140 32 136 1.02e-22 90.9
Msa0942240 MtrunA17_Chr4g0007601 51.220 82 40 0 58 139 26 107 2.38e-18 79.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0942240 AT5G14360.1 54.386 171 56 5 1 157 1 163 2.26e-54 169
Msa0942240 AT5G40630.1 46.914 162 65 4 1 142 1 161 9.59e-43 139
Msa0942240 AT5G62100.3 49.057 106 53 1 38 142 15 120 1.26e-26 98.2
Msa0942240 AT5G62100.6 49.057 106 53 1 38 142 15 120 1.26e-26 98.2
Msa0942240 AT5G62100.5 48.148 108 55 1 38 144 15 122 7.68e-26 97.8
Msa0942240 AT5G62100.4 48.148 108 55 1 38 144 15 122 1.06e-25 97.8
Msa0942240 AT5G62100.2 48.148 108 55 1 38 144 15 122 6.71e-25 97.4
Msa0942240 AT5G62100.1 48.148 108 55 1 38 144 15 122 1.20e-24 96.7
Msa0942240 AT5G07220.1 42.017 119 68 1 38 155 21 139 1.27e-24 96.7
Msa0942240 AT5G52060.1 41.667 108 58 1 38 140 39 146 1.22e-21 89.4
Msa0942240 AT3G51780.1 41.071 112 50 2 36 131 8 119 2.01e-19 82.4

Find 42 sgRNAs with CRISPR-Local

Find 132 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTATCTAGTTGTTGGACATT+TGG 0.297856 6_3:-16801839 Msa0942240:three_prime_UTR
TTAATTTAATTTGATGTAAT+GGG 0.306583 6_3:-16801915 Msa0942240:three_prime_UTR
TTTAATTTAATTTGATGTAA+TGG 0.319189 6_3:-16801916 Msa0942240:three_prime_UTR
ATTGAAGCAACTTCAACTTT+TGG 0.327143 6_3:-16802800 Msa0942240:intron
TAGAGAAGCCTTTGTTCTCT+TGG 0.329320 6_3:+16802263 None:intergenic
AGCATATCTAAACTTGGCTT+TGG 0.330269 6_3:-16802992 Msa0942240:CDS
GCTTGATTGTATCATGAATT+CGG 0.338407 6_3:+16801999 None:intergenic
TTCTTCACATGATTGGTGTT+AGG 0.341495 6_3:-16802211 Msa0942240:CDS
TTTGTCACTTGTAACAAGTT+TGG 0.343072 6_3:-16802288 Msa0942240:CDS
AAAATTTGTACAATACAAAA+AGG 0.351830 6_3:+16801735 None:intergenic
AATTTCAGGAGAATTGAAAA+TGG 0.354607 6_3:-16802312 Msa0942240:intron
AGAAATGAAGCTACTTGGTT+TGG 0.373066 6_3:-16802147 Msa0942240:CDS
TCACTACAATCCTTCTCAAT+TGG 0.382631 6_3:+16802950 None:intergenic
AGCTTCATTTCTTTGATAGC+TGG 0.393914 6_3:+16802158 None:intergenic
TCTTCACATGATTGGTGTTA+GGG 0.396279 6_3:-16802210 Msa0942240:CDS
AATGAATTTCTTCACATGAT+TGG 0.414769 6_3:-16802218 Msa0942240:CDS
TTCTTCCAAAGAAAACATAA+AGG 0.426486 6_3:-16803085 Msa0942240:five_prime_UTR
ATGTGTACTTATCTAGTTGT+TGG 0.433920 6_3:-16801847 Msa0942240:three_prime_UTR
ATCAAAGAAATGAAGCTACT+TGG 0.456169 6_3:-16802152 Msa0942240:CDS
ATCGTCTGATCTTAATCAAA+TGG 0.460419 6_3:-16802072 Msa0942240:three_prime_UTR
AGAGAGAGTAACAAAAGTGT+TGG 0.471291 6_3:-16802875 Msa0942240:CDS
TGTAGAAGCATATCTAAACT+TGG 0.485899 6_3:-16802998 Msa0942240:CDS
TGAAAATAGTGAAATCGAAT+GGG 0.493131 6_3:-16802930 Msa0942240:CDS
AACTCTTAATTAATTAGTGA+TGG 0.495859 6_3:-16801966 Msa0942240:three_prime_UTR
GTGAAAATAGTGAAATCGAA+TGG 0.497284 6_3:-16802931 Msa0942240:CDS
AAGCTACTTGGTTTGGCAAG+AGG 0.530918 6_3:-16802140 Msa0942240:CDS
TATACTCTGATTGTGTAACT+AGG 0.541450 6_3:+16802101 None:intergenic
ATCGAATGGGAACTTAGGCC+TGG 0.546005 6_3:-16802917 Msa0942240:CDS
AATTAGTGATGGTGCTAACA+AGG 0.547999 6_3:-16801955 Msa0942240:three_prime_UTR
AAAATAAGATGATGAAGTTG+AGG 0.552877 6_3:-16803033 Msa0942240:exon
TGATGAAGTTGAGGTCAAAG+AGG 0.559715 6_3:-16803024 Msa0942240:CDS
GCAAACACTTCAACATAACA+TGG 0.564398 6_3:+16801785 None:intergenic
TTTGGAAGAATTGAAAGTTG+AGG 0.580530 6_3:+16803098 None:intergenic
GAACAAAGGCTTCTCTACAA+AGG 0.591704 6_3:-16802257 Msa0942240:CDS
AGACAAGGTTCTTCTTCTAG+AGG 0.592443 6_3:-16802183 Msa0942240:CDS
GAGTTTCAACTATGTCAAAG+TGG 0.599297 6_3:-16802835 Msa0942240:CDS
AGTAGCATCTCCAATTGAGA+AGG 0.608005 6_3:-16802960 Msa0942240:CDS
GTGAAATCGAATGGGAACTT+AGG 0.612081 6_3:-16802922 Msa0942240:CDS
TGGTGTTAGGGACAAAGACA+AGG 0.622779 6_3:-16802198 Msa0942240:CDS
CAAACACTTCAACATAACAT+GGG 0.644120 6_3:+16801786 None:intergenic
GTTTGGAGCCAAGAGAACAA+AGG 0.661395 6_3:-16802271 Msa0942240:CDS
GAATGGGAACTTAGGCCTGG+TGG 0.713354 6_3:-16802914 Msa0942240:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AAAAATATAAATAAAAATTT+TGG + chr6_3:16802395-16802414 None:intergenic 0.0%
!!! AAAAATATAAATAAAAATTT+TGG + chr6_3:16802395-16802414 None:intergenic 0.0%
!! TAAATTGAACAATTATAATT+AGG - chr6_3:16802124-16802143 Msa0942240:CDS 10.0%
!! TATAATTAGGTAAATATATA+AGG - chr6_3:16802137-16802156 Msa0942240:CDS 10.0%
!!! TTTAATTTAATTTGATGTAA+TGG - chr6_3:16802918-16802937 Msa0942240:CDS 10.0%
!!! TTAATTTAATTTGATGTAAT+GGG - chr6_3:16802919-16802938 Msa0942240:CDS 10.0%
!! TAAATTGAACAATTATAATT+AGG - chr6_3:16802124-16802143 Msa0942240:CDS 10.0%
!! TATAATTAGGTAAATATATA+AGG - chr6_3:16802137-16802156 Msa0942240:CDS 10.0%
!!! TTTAATTTAATTTGATGTAA+TGG - chr6_3:16802918-16802937 Msa0942240:CDS 10.0%
!!! TTAATTTAATTTGATGTAAT+GGG - chr6_3:16802919-16802938 Msa0942240:CDS 10.0%
!! TTATTAAGATCAAATCATTT+AGG - chr6_3:16802258-16802277 Msa0942240:CDS 15.0%
!! AAACTATAAAAATTACTTTG+AGG - chr6_3:16802473-16802492 Msa0942240:intron 15.0%
!! AAAATTTATGAATGAATTTC+AGG - chr6_3:16802508-16802527 Msa0942240:intron 15.0%
!! TTATTAAGATCAAATCATTT+AGG - chr6_3:16802258-16802277 Msa0942240:CDS 15.0%
!! AAACTATAAAAATTACTTTG+AGG - chr6_3:16802473-16802492 Msa0942240:intron 15.0%
!! AAAATTTATGAATGAATTTC+AGG - chr6_3:16802508-16802527 Msa0942240:intron 15.0%
!!! TAAAACCTTTATGTTTTCTT+TGG + chr6_3:16801757-16801776 None:intergenic 20.0%
!! AACTCTTAATTAATTAGTGA+TGG - chr6_3:16802868-16802887 Msa0942240:CDS 20.0%
!!! TCACTTTTTGTTTAGAATAT+AGG - chr6_3:16802949-16802968 Msa0942240:CDS 20.0%
!!! TAAAACCTTTATGTTTTCTT+TGG + chr6_3:16801757-16801776 None:intergenic 20.0%
!! AACTCTTAATTAATTAGTGA+TGG - chr6_3:16802868-16802887 Msa0942240:CDS 20.0%
!!! TCACTTTTTGTTTAGAATAT+AGG - chr6_3:16802949-16802968 Msa0942240:CDS 20.0%
! TTCTTCCAAAGAAAACATAA+AGG - chr6_3:16801749-16801768 Msa0942240:three_prime_UTR 25.0%
! AAAATAAGATGATGAAGTTG+AGG - chr6_3:16801801-16801820 Msa0942240:three_prime_UTR 25.0%
! TGAAAATAGTGAAATCGAAT+GGG - chr6_3:16801904-16801923 Msa0942240:three_prime_UTR 25.0%
!!! AACTACTTGCTAACAATTTT+CGG + chr6_3:16802218-16802237 None:intergenic 25.0%
! AAATAATTCAAAGTTCGGTT+AGG + chr6_3:16802305-16802324 None:intergenic 25.0%
! GGAGTAAATAATTCAAAGTT+CGG + chr6_3:16802310-16802329 None:intergenic 25.0%
! AATTTCAGGAGAATTGAAAA+TGG - chr6_3:16802522-16802541 Msa0942240:intron 25.0%
! AATGAATTTCTTCACATGAT+TGG - chr6_3:16802616-16802635 Msa0942240:intron 25.0%
!!! TGGTTGATTTTTAAATGTGT+TGG - chr6_3:16803015-16803034 Msa0942240:CDS 25.0%
! TTCTTCCAAAGAAAACATAA+AGG - chr6_3:16801749-16801768 Msa0942240:three_prime_UTR 25.0%
! AAAATAAGATGATGAAGTTG+AGG - chr6_3:16801801-16801820 Msa0942240:three_prime_UTR 25.0%
! TGAAAATAGTGAAATCGAAT+GGG - chr6_3:16801904-16801923 Msa0942240:three_prime_UTR 25.0%
!!! AACTACTTGCTAACAATTTT+CGG + chr6_3:16802218-16802237 None:intergenic 25.0%
! AAATAATTCAAAGTTCGGTT+AGG + chr6_3:16802305-16802324 None:intergenic 25.0%
! GGAGTAAATAATTCAAAGTT+CGG + chr6_3:16802310-16802329 None:intergenic 25.0%
! AATTTCAGGAGAATTGAAAA+TGG - chr6_3:16802522-16802541 Msa0942240:intron 25.0%
! AATGAATTTCTTCACATGAT+TGG - chr6_3:16802616-16802635 Msa0942240:intron 25.0%
!!! TGGTTGATTTTTAAATGTGT+TGG - chr6_3:16803015-16803034 Msa0942240:CDS 25.0%
! TGTAGAAGCATATCTAAACT+TGG - chr6_3:16801836-16801855 Msa0942240:three_prime_UTR 30.0%
GTGAAAATAGTGAAATCGAA+TGG - chr6_3:16801903-16801922 Msa0942240:three_prime_UTR 30.0%
! ATTGAAGCAACTTCAACTTT+TGG - chr6_3:16802034-16802053 Msa0942240:three_prime_UTR 30.0%
AATCAATACAAATGAAAGGC+TGG + chr6_3:16802070-16802089 None:intergenic 30.0%
AGGCAATCAATACAAATGAA+AGG + chr6_3:16802074-16802093 None:intergenic 30.0%
!!! GTATTGATTGCCTTTTGTTT+CGG - chr6_3:16802081-16802100 Msa0942240:exon 30.0%
!! TATTGATTGCCTTTTGTTTC+GGG - chr6_3:16802082-16802101 Msa0942240:exon 30.0%
!! ACTCCATTTTTAAGAGTTAC+AGG - chr6_3:16802325-16802344 Msa0942240:intron 30.0%
!! CTCCATTTTTAAGAGTTACA+GGG - chr6_3:16802326-16802345 Msa0942240:intron 30.0%
AACCCTGTAACTCTTAAAAA+TGG + chr6_3:16802331-16802350 None:intergenic 30.0%
GTTACAGGGTTAAACAAATT+TGG - chr6_3:16802340-16802359 Msa0942240:intron 30.0%
! GAGTAGACAATAACTTTTGT+TGG - chr6_3:16802362-16802381 Msa0942240:intron 30.0%
! TTTGTCACTTGTAACAAGTT+TGG - chr6_3:16802546-16802565 Msa0942240:intron 30.0%
ATCAAAGAAATGAAGCTACT+TGG - chr6_3:16802682-16802701 Msa0942240:intron 30.0%
TATACTCTGATTGTGTAACT+AGG + chr6_3:16802736-16802755 None:intergenic 30.0%
ATCGTCTGATCTTAATCAAA+TGG - chr6_3:16802762-16802781 Msa0942240:intron 30.0%
GCTTGATTGTATCATGAATT+CGG + chr6_3:16802838-16802857 None:intergenic 30.0%
ATGTGTACTTATCTAGTTGT+TGG - chr6_3:16802987-16803006 Msa0942240:CDS 30.0%
TTATCTAGTTGTTGGACATT+TGG - chr6_3:16802995-16803014 Msa0942240:CDS 30.0%
CAAACACTTCAACATAACAT+GGG + chr6_3:16803051-16803070 None:intergenic 30.0%
! TGTAGAAGCATATCTAAACT+TGG - chr6_3:16801836-16801855 Msa0942240:three_prime_UTR 30.0%
GTGAAAATAGTGAAATCGAA+TGG - chr6_3:16801903-16801922 Msa0942240:three_prime_UTR 30.0%
! ATTGAAGCAACTTCAACTTT+TGG - chr6_3:16802034-16802053 Msa0942240:three_prime_UTR 30.0%
AATCAATACAAATGAAAGGC+TGG + chr6_3:16802070-16802089 None:intergenic 30.0%
AGGCAATCAATACAAATGAA+AGG + chr6_3:16802074-16802093 None:intergenic 30.0%
!!! GTATTGATTGCCTTTTGTTT+CGG - chr6_3:16802081-16802100 Msa0942240:exon 30.0%
!! TATTGATTGCCTTTTGTTTC+GGG - chr6_3:16802082-16802101 Msa0942240:exon 30.0%
!! ACTCCATTTTTAAGAGTTAC+AGG - chr6_3:16802325-16802344 Msa0942240:intron 30.0%
!! CTCCATTTTTAAGAGTTACA+GGG - chr6_3:16802326-16802345 Msa0942240:intron 30.0%
AACCCTGTAACTCTTAAAAA+TGG + chr6_3:16802331-16802350 None:intergenic 30.0%
GTTACAGGGTTAAACAAATT+TGG - chr6_3:16802340-16802359 Msa0942240:intron 30.0%
! GAGTAGACAATAACTTTTGT+TGG - chr6_3:16802362-16802381 Msa0942240:intron 30.0%
! TTTGTCACTTGTAACAAGTT+TGG - chr6_3:16802546-16802565 Msa0942240:intron 30.0%
ATCAAAGAAATGAAGCTACT+TGG - chr6_3:16802682-16802701 Msa0942240:intron 30.0%
TATACTCTGATTGTGTAACT+AGG + chr6_3:16802736-16802755 None:intergenic 30.0%
ATCGTCTGATCTTAATCAAA+TGG - chr6_3:16802762-16802781 Msa0942240:intron 30.0%
GCTTGATTGTATCATGAATT+CGG + chr6_3:16802838-16802857 None:intergenic 30.0%
ATGTGTACTTATCTAGTTGT+TGG - chr6_3:16802987-16803006 Msa0942240:CDS 30.0%
TTATCTAGTTGTTGGACATT+TGG - chr6_3:16802995-16803014 Msa0942240:CDS 30.0%
CAAACACTTCAACATAACAT+GGG + chr6_3:16803051-16803070 None:intergenic 30.0%
AGCATATCTAAACTTGGCTT+TGG - chr6_3:16801842-16801861 Msa0942240:three_prime_UTR 35.0%
TCACTACAATCCTTCTCAAT+TGG + chr6_3:16801887-16801906 None:intergenic 35.0%
! AGAGAGAGTAACAAAAGTGT+TGG - chr6_3:16801959-16801978 Msa0942240:three_prime_UTR 35.0%
GAGTTTCAACTATGTCAAAG+TGG - chr6_3:16801999-16802018 Msa0942240:three_prime_UTR 35.0%
TAGTTTGAACCCGAAACAAA+AGG + chr6_3:16802094-16802113 None:intergenic 35.0%
TAATTCAAAGTTCGGTTAGG+AGG + chr6_3:16802302-16802321 None:intergenic 35.0%
! TTCTTCACATGATTGGTGTT+AGG - chr6_3:16802623-16802642 Msa0942240:intron 35.0%
!! TCTTCACATGATTGGTGTTA+GGG - chr6_3:16802624-16802643 Msa0942240:intron 35.0%
! AGCTTCATTTCTTTGATAGC+TGG + chr6_3:16802679-16802698 None:intergenic 35.0%
AGAAATGAAGCTACTTGGTT+TGG - chr6_3:16802687-16802706 Msa0942240:intron 35.0%
! AATTAGTGATGGTGCTAACA+AGG - chr6_3:16802879-16802898 Msa0942240:CDS 35.0%
GCAAACACTTCAACATAACA+TGG + chr6_3:16803052-16803071 None:intergenic 35.0%
AGCATATCTAAACTTGGCTT+TGG - chr6_3:16801842-16801861 Msa0942240:three_prime_UTR 35.0%
TCACTACAATCCTTCTCAAT+TGG + chr6_3:16801887-16801906 None:intergenic 35.0%
! AGAGAGAGTAACAAAAGTGT+TGG - chr6_3:16801959-16801978 Msa0942240:three_prime_UTR 35.0%
GAGTTTCAACTATGTCAAAG+TGG - chr6_3:16801999-16802018 Msa0942240:three_prime_UTR 35.0%
TAGTTTGAACCCGAAACAAA+AGG + chr6_3:16802094-16802113 None:intergenic 35.0%
TAATTCAAAGTTCGGTTAGG+AGG + chr6_3:16802302-16802321 None:intergenic 35.0%
! TTCTTCACATGATTGGTGTT+AGG - chr6_3:16802623-16802642 Msa0942240:intron 35.0%
!! TCTTCACATGATTGGTGTTA+GGG - chr6_3:16802624-16802643 Msa0942240:intron 35.0%
! AGCTTCATTTCTTTGATAGC+TGG + chr6_3:16802679-16802698 None:intergenic 35.0%
AGAAATGAAGCTACTTGGTT+TGG - chr6_3:16802687-16802706 Msa0942240:intron 35.0%
! AATTAGTGATGGTGCTAACA+AGG - chr6_3:16802879-16802898 Msa0942240:CDS 35.0%
GCAAACACTTCAACATAACA+TGG + chr6_3:16803052-16803071 None:intergenic 35.0%
TGATGAAGTTGAGGTCAAAG+AGG - chr6_3:16801810-16801829 Msa0942240:three_prime_UTR 40.0%
AGTAGCATCTCCAATTGAGA+AGG - chr6_3:16801874-16801893 Msa0942240:three_prime_UTR 40.0%
GTGAAATCGAATGGGAACTT+AGG - chr6_3:16801912-16801931 Msa0942240:three_prime_UTR 40.0%
!!! GCACACACGTAAGACTTTTT+TGG + chr6_3:16802445-16802464 None:intergenic 40.0%
TAGAGAAGCCTTTGTTCTCT+TGG + chr6_3:16802574-16802593 None:intergenic 40.0%
GAACAAAGGCTTCTCTACAA+AGG - chr6_3:16802577-16802596 Msa0942240:intron 40.0%
AGACAAGGTTCTTCTTCTAG+AGG - chr6_3:16802651-16802670 Msa0942240:intron 40.0%
TGATGAAGTTGAGGTCAAAG+AGG - chr6_3:16801810-16801829 Msa0942240:three_prime_UTR 40.0%
AGTAGCATCTCCAATTGAGA+AGG - chr6_3:16801874-16801893 Msa0942240:three_prime_UTR 40.0%
GTGAAATCGAATGGGAACTT+AGG - chr6_3:16801912-16801931 Msa0942240:three_prime_UTR 40.0%
!!! GCACACACGTAAGACTTTTT+TGG + chr6_3:16802445-16802464 None:intergenic 40.0%
TAGAGAAGCCTTTGTTCTCT+TGG + chr6_3:16802574-16802593 None:intergenic 40.0%
GAACAAAGGCTTCTCTACAA+AGG - chr6_3:16802577-16802596 Msa0942240:intron 40.0%
AGACAAGGTTCTTCTTCTAG+AGG - chr6_3:16802651-16802670 Msa0942240:intron 40.0%
! TTTTGTACAAGCATGCCACC+AGG + chr6_3:16801938-16801957 None:intergenic 45.0%
! GTTTGGAGCCAAGAGAACAA+AGG - chr6_3:16802563-16802582 Msa0942240:intron 45.0%
! TGGTGTTAGGGACAAAGACA+AGG - chr6_3:16802636-16802655 Msa0942240:intron 45.0%
!! AAGCTACTTGGTTTGGCAAG+AGG - chr6_3:16802694-16802713 Msa0942240:intron 45.0%
! TTTTGTACAAGCATGCCACC+AGG + chr6_3:16801938-16801957 None:intergenic 45.0%
! GTTTGGAGCCAAGAGAACAA+AGG - chr6_3:16802563-16802582 Msa0942240:intron 45.0%
! TGGTGTTAGGGACAAAGACA+AGG - chr6_3:16802636-16802655 Msa0942240:intron 45.0%
!! AAGCTACTTGGTTTGGCAAG+AGG - chr6_3:16802694-16802713 Msa0942240:intron 45.0%
ATCGAATGGGAACTTAGGCC+TGG - chr6_3:16801917-16801936 Msa0942240:three_prime_UTR 50.0%
CGGTTAGGAGGTAACGAAAC+AGG + chr6_3:16802290-16802309 None:intergenic 50.0%
ATCGAATGGGAACTTAGGCC+TGG - chr6_3:16801917-16801936 Msa0942240:three_prime_UTR 50.0%
CGGTTAGGAGGTAACGAAAC+AGG + chr6_3:16802290-16802309 None:intergenic 50.0%
GAATGGGAACTTAGGCCTGG+TGG - chr6_3:16801920-16801939 Msa0942240:three_prime_UTR 55.0%
GAATGGGAACTTAGGCCTGG+TGG - chr6_3:16801920-16801939 Msa0942240:three_prime_UTR 55.0%
Chromosome Type Strat End Strand Name
chr6_3 gene 16801739 16803117 16801739 ID=Msa0942240;Name=Msa0942240
chr6_3 mRNA 16801739 16803117 16801739 ID=Msa0942240-mRNA-1;Parent=Msa0942240;Name=Msa0942240-mRNA-1;_AED=0.00;_eAED=0.00;_QI=70|1|1|1|1|1|2|361|157
chr6_3 exon 16801739 16802326 16801739 ID=Msa0942240-mRNA-1:exon:5083;Parent=Msa0942240-mRNA-1
chr6_3 exon 16802801 16803117 16802801 ID=Msa0942240-mRNA-1:exon:5082;Parent=Msa0942240-mRNA-1
chr6_3 five_prime_UTR 16803048 16803117 16803048 ID=Msa0942240-mRNA-1:five_prime_utr;Parent=Msa0942240-mRNA-1
chr6_3 CDS 16802801 16803047 16802801 ID=Msa0942240-mRNA-1:cds;Parent=Msa0942240-mRNA-1
chr6_3 CDS 16802100 16802326 16802100 ID=Msa0942240-mRNA-1:cds;Parent=Msa0942240-mRNA-1
chr6_3 three_prime_UTR 16801739 16802099 16801739 ID=Msa0942240-mRNA-1:three_prime_utr;Parent=Msa0942240-mRNA-1
Gene Sequence

>Msa0942240

ATGATGAAGTTGAGGTCAAAGAGGTTTTGTAGAAGCATATCTAAACTTGGCTTTGGAAACAAAGTAGTAGCATCTCCAATTGAGAAGGATTGTAGTGAAAATAGTGAAATCGAATGGGAACTTAGGCCTGGTGGCATGCTTGTACAAAAAAGAGAGAGTAACAAAAGTGTTGGAGAGATGATCACAATTAGAGTTTCAACTATGTCAAAGTGGCATGACATTTCTATTGAAGCAACTTCAACTTTTGGAGAATTGAAAATGGTTTTGTCACTTGTAACAAGTTTGGAGCCAAGAGAACAAAGGCTTCTCTACAAAGGTAAAGAGAGAGATGACAATGAATTTCTTCACATGATTGGTGTTAGGGACAAAGACAAGGTTCTTCTTCTAGAGGATCCAGCTATCAAAGAAATGAAGCTACTTGGTTTGGCAAGAGGACAATCTATTAACAATCCTAGTTACACAATCAGAGTATAA
Protein sequence

>Msa0942240

MMKLRSKRFCRSISKLGFGNKVVASPIEKDCSENSEIEWELRPGGMLVQKRESNKSVGEMITIRVSTMSKWHDISIEATSTFGELKMVLSLVTSLEPREQRLLYKGKERDDNEFLHMIGVRDKDKVLLLEDPAIKEMKLLGLARGQSINNPSYTIRV*