Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0897950 | XP_013452962.1 | 74.694 | 245 | 60 | 2 | 3 | 247 | 21 | 263 | 1.19e-116 | 358 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0897950 | sp|Q8VYG0|LRL13_ARATH | 31.122 | 196 | 121 | 8 | 37 | 230 | 42 | 225 | 4.57e-17 | 83.6 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0897950 | A0A072UMB2 | 74.694 | 245 | 60 | 2 | 3 | 247 | 21 | 263 | 5.70e-117 | 358 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0815320 | Msa0897950 | 0.819643 | 1.042669e-52 | -8.615850e-47 |
| Msa0818010 | Msa0897950 | 0.843798 | 1.122391e-58 | -8.615850e-47 |
| Msa0533430 | Msa0897950 | 0.843406 | 1.428703e-58 | -8.615850e-47 |
| Msa0580610 | Msa0897950 | 0.809933 | 1.481112e-50 | -8.615850e-47 |
| Msa0884920 | Msa0897950 | 0.811279 | 7.581662e-51 | -8.615850e-47 |
| Msa0897950 | Msa0912500 | 0.806970 | 6.349731e-50 | -8.615850e-47 |
| Msa0897950 | Msa1006250 | 0.849937 | 2.345409e-60 | -8.615850e-47 |
| Msa0897950 | Msa1006390 | 0.800972 | 1.121457e-48 | -8.615850e-47 |
| Msa0897950 | Msa1359820 | 0.803175 | 3.952335e-49 | -8.615850e-47 |
| Msa0897950 | Msa1444370 | 0.807242 | 5.561583e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0897950 | MtrunA17_Chr6g0483821 | 74.694 | 245 | 60 | 2 | 3 | 247 | 21 | 263 | 1.10e-120 | 358 |
| Msa0897950 | MtrunA17_Chr6g0483931 | 69.600 | 250 | 65 | 5 | 3 | 247 | 21 | 264 | 3.24e-116 | 347 |
| Msa0897950 | MtrunA17_Chr6g0467631 | 57.529 | 259 | 84 | 7 | 3 | 247 | 9 | 255 | 8.70e-89 | 276 |
| Msa0897950 | MtrunA17_Chr6g0484051 | 57.917 | 240 | 93 | 5 | 10 | 247 | 23 | 256 | 2.28e-86 | 269 |
| Msa0897950 | MtrunA17_Chr6g0484061 | 54.000 | 250 | 87 | 7 | 3 | 247 | 16 | 242 | 3.63e-77 | 234 |
| Msa0897950 | MtrunA17_Chr6g0483901 | 53.846 | 221 | 87 | 5 | 1 | 216 | 18 | 228 | 9.84e-75 | 228 |
| Msa0897950 | MtrunA17_Chr8g0391231 | 34.615 | 234 | 123 | 9 | 17 | 235 | 19 | 237 | 3.13e-28 | 112 |
| Msa0897950 | MtrunA17_Chr6g0484081 | 54.255 | 94 | 35 | 4 | 14 | 102 | 21 | 111 | 5.45e-24 | 93.2 |
| Msa0897950 | MtrunA17_Chr6g0467591 | 58.824 | 68 | 26 | 1 | 3 | 68 | 28 | 95 | 3.07e-21 | 85.5 |
| Msa0897950 | MtrunA17_Chr8g0376061 | 32.663 | 199 | 115 | 7 | 37 | 225 | 36 | 225 | 3.33e-20 | 89.4 |
| Msa0897950 | MtrunA17_Chr7g0251011 | 33.714 | 175 | 108 | 5 | 19 | 188 | 21 | 192 | 3.63e-18 | 81.6 |
| Msa0897950 | MtrunA17_Chr7g0251131 | 33.714 | 175 | 108 | 5 | 19 | 188 | 18 | 189 | 3.75e-18 | 81.3 |
| Msa0897950 | MtrunA17_Chr6g0483791 | 26.087 | 253 | 152 | 10 | 2 | 234 | 11 | 248 | 1.81e-12 | 66.6 |
| Msa0897950 | MtrunA17_Chr6g0483851 | 27.801 | 241 | 137 | 12 | 17 | 236 | 31 | 255 | 2.10e-12 | 66.6 |
| Msa0897950 | MtrunA17_Chr6g0467601 | 57.143 | 56 | 20 | 2 | 192 | 247 | 2 | 53 | 6.30e-12 | 64.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0897950 | AT5G38210.1 | 31.122 | 196 | 121 | 8 | 37 | 230 | 42 | 225 | 4.64e-18 | 83.6 |
| Msa0897950 | AT5G38250.1 | 33.500 | 200 | 105 | 9 | 37 | 225 | 41 | 223 | 1.31e-17 | 82.0 |
| Msa0897950 | AT1G66940.1 | 32.105 | 190 | 115 | 6 | 37 | 222 | 37 | 216 | 8.89e-17 | 78.6 |
| Msa0897950 | AT1G66940.4 | 32.105 | 190 | 115 | 6 | 37 | 222 | 37 | 216 | 2.50e-16 | 77.8 |
| Msa0897950 | AT1G66940.2 | 32.105 | 190 | 115 | 6 | 37 | 222 | 37 | 216 | 2.81e-16 | 77.0 |
| Msa0897950 | AT1G66940.3 | 32.105 | 190 | 115 | 6 | 37 | 222 | 37 | 216 | 2.81e-16 | 77.0 |
| Msa0897950 | AT1G66880.1 | 32.984 | 191 | 115 | 7 | 36 | 225 | 23 | 201 | 1.59e-15 | 76.3 |
| Msa0897950 | AT1G66880.1 | 27.861 | 201 | 131 | 7 | 37 | 236 | 416 | 603 | 7.04e-15 | 74.3 |
| Msa0897950 | AT1G66880.3 | 28.293 | 205 | 131 | 9 | 34 | 236 | 34 | 224 | 6.31e-15 | 74.3 |
| Msa0897950 | AT1G66880.2 | 27.451 | 204 | 134 | 7 | 34 | 236 | 34 | 224 | 6.48e-15 | 74.3 |
| Msa0897950 | AT5G38240.1 | 33.019 | 212 | 107 | 11 | 37 | 230 | 41 | 235 | 1.53e-14 | 73.2 |
| Msa0897950 | AT5G38240.2 | 33.019 | 212 | 107 | 11 | 37 | 230 | 41 | 235 | 1.88e-14 | 72.8 |
| Msa0897950 | AT1G67000.1 | 30.612 | 196 | 119 | 9 | 34 | 225 | 35 | 217 | 2.89e-14 | 72.4 |
| Msa0897950 | AT1G66930.2 | 30.890 | 191 | 117 | 9 | 37 | 225 | 37 | 214 | 6.96e-14 | 71.2 |
Find 36 sgRNAs with CRISPR-Local
Find 280 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATAACAAAATGGTAGTATTT+TGG | 0.221740 | 6_1:-90580856 | None:intergenic |
| CCAACATCTCTTATCCATTC+TGG | 0.227600 | 6_1:+90580771 | Msa0897950:CDS |
| AGAAGAATGCTTAAGGTGTT+TGG | 0.278443 | 6_1:+90581285 | Msa0897950:CDS |
| CTTGAAAATGGTTTGCATAA+GGG | 0.334742 | 6_1:+90581238 | Msa0897950:CDS |
| GTGAAGGAGGAGATTGTAAA+TGG | 0.339841 | 6_1:+90581311 | Msa0897950:CDS |
| ACAGTATAGAAAGCATGATT+TGG | 0.365556 | 6_1:-90581094 | None:intergenic |
| TCTTGAAAATGGTTTGCATA+AGG | 0.367058 | 6_1:+90581237 | Msa0897950:CDS |
| ATGTTTCTCAATAGCATCAT+TGG | 0.376339 | 6_1:-90581338 | None:intergenic |
| GAAGAATGCTTAAGGTGTTT+GGG | 0.377138 | 6_1:+90581286 | Msa0897950:CDS |
| GGTGATATGTCCACAGTTAT+AGG | 0.390648 | 6_1:-90580750 | None:intergenic |
| TTGTGGCAGTAAAGGTGATA+AGG | 0.403660 | 6_1:-90580830 | None:intergenic |
| CAACATCTCTTATCCATTCT+GGG | 0.422208 | 6_1:+90580772 | Msa0897950:CDS |
| TAATAATCATCTTTCACAAC+AGG | 0.440138 | 6_1:-90581193 | None:intergenic |
| TTGAAAATGGTTTGCATAAG+GGG | 0.445637 | 6_1:+90581239 | Msa0897950:CDS |
| ATCTGAAAGAAGAATGCTTA+AGG | 0.453203 | 6_1:+90581278 | Msa0897950:CDS |
| TTTGGTTGTTGTGGCAGTAA+AGG | 0.489320 | 6_1:-90580838 | None:intergenic |
| AGGTGTTTGGGAAGTGAAGG+AGG | 0.495202 | 6_1:+90581298 | Msa0897950:CDS |
| ACTGATTGTGGTAGTTTCTG+TGG | 0.503964 | 6_1:-90580692 | None:intergenic |
| TGTGGCAGTAAAGGTGATAA+GGG | 0.505138 | 6_1:-90580829 | None:intergenic |
| AATCATGCTTTCTATACTGT+TGG | 0.505252 | 6_1:+90581097 | Msa0897950:CDS |
| ATAAGTTGTTGGAAGAATCA+AGG | 0.519403 | 6_1:+90581128 | Msa0897950:CDS |
| TTGCCAGCACCACAACGAAA+AGG | 0.544843 | 6_1:-90580806 | None:intergenic |
| TGGTGATGAAGATAAGTTGT+TGG | 0.552274 | 6_1:+90581117 | Msa0897950:CDS |
| ACAGGAAAATCTGTTCCTAC+TGG | 0.556182 | 6_1:-90581175 | None:intergenic |
| AATACAGTGATGTTGTTGAC+AGG | 0.559763 | 6_1:-90581019 | None:intergenic |
| GAATAATCGTTAACTGATTG+TGG | 0.560743 | 6_1:-90580704 | None:intergenic |
| ATACAAAACTCCTATAACTG+TGG | 0.565300 | 6_1:+90580740 | Msa0897950:CDS |
| TCGTAAATCGTAATAGCAAG+TGG | 0.567995 | 6_1:-90581368 | None:intergenic |
| CCAGAATGGATAAGAGATGT+TGG | 0.571276 | 6_1:-90580771 | None:intergenic |
| TTAAGGTGTTTGGGAAGTGA+AGG | 0.577434 | 6_1:+90581295 | Msa0897950:CDS |
| TGAAGATATTGAAACAGAGG+TGG | 0.602391 | 6_1:-90580995 | None:intergenic |
| GGCTGAGAGTGCGATTGATG+TGG | 0.631401 | 6_1:-90580671 | None:intergenic |
| GGTTGAAGATATTGAAACAG+AGG | 0.652436 | 6_1:-90580998 | None:intergenic |
| AGACATATTCAAGTGCCAGT+AGG | 0.655294 | 6_1:+90581160 | Msa0897950:CDS |
| AACATCTCTTATCCATTCTG+GGG | 0.658842 | 6_1:+90580773 | Msa0897950:CDS |
| AAATAAGTATCATTAAACTG+AGG | 0.720599 | 6_1:-90580968 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATGTAAAATTTTATTTTGAA+AGG | + | chr6_1:90580233-90580252 | Msa0897950:intron | 10.0% |
| !!! | ATGTAAAATTTTATTTTGAA+AGG | + | chr6_1:90580233-90580252 | Msa0897950:intron | 10.0% |
| !! | AGTTATAACAATATAACAAT+AGG | + | chr6_1:90579889-90579908 | Msa0897950:intron | 15.0% |
| !!! | TAAAATTTTACATTGTTGTT+AGG | - | chr6_1:90580226-90580245 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTCATCTTA+AGG | + | chr6_1:90580353-90580372 | Msa0897950:intron | 15.0% |
| !! | AAGAAATAAATTCATCTTAA+GGG | + | chr6_1:90580354-90580373 | Msa0897950:intron | 15.0% |
| !! | AGTTATAACAATATAACAAT+AGG | + | chr6_1:90579889-90579908 | Msa0897950:intron | 15.0% |
| !!! | TAAAATTTTACATTGTTGTT+AGG | - | chr6_1:90580226-90580245 | None:intergenic | 15.0% |
| !! | AAAGAAATAAATTCATCTTA+AGG | + | chr6_1:90580353-90580372 | Msa0897950:intron | 15.0% |
| !! | AAGAAATAAATTCATCTTAA+GGG | + | chr6_1:90580354-90580373 | Msa0897950:intron | 15.0% |
| !!! | TAAACTCTGTTTTATTGATA+AGG | - | chr6_1:90579306-90579325 | None:intergenic | 20.0% |
| !! | AAGTATCAATTGTTCTTATT+TGG | - | chr6_1:90579722-90579741 | None:intergenic | 20.0% |
| !! | CAAAATGAAAAGAATAATGA+AGG | + | chr6_1:90579913-90579932 | Msa0897950:intron | 20.0% |
| !!! | GTTTTTAATTTACTTACGAT+AGG | - | chr6_1:90579981-90580000 | None:intergenic | 20.0% |
| !! | TCATCACATAGAAAAAAATT+AGG | + | chr6_1:90580023-90580042 | Msa0897950:intron | 20.0% |
| !! | CATCACATAGAAAAAAATTA+GGG | + | chr6_1:90580024-90580043 | Msa0897950:intron | 20.0% |
| !!! | TTGGTTCATTTTATATATAG+TGG | + | chr6_1:90580451-90580470 | Msa0897950:intron | 20.0% |
| !!! | ATAACAAAATGGTAGTATTT+TGG | - | chr6_1:90580859-90580878 | None:intergenic | 20.0% |
| !!! | ATTTTGTGAAGATAACAAAA+TGG | - | chr6_1:90580870-90580889 | None:intergenic | 20.0% |
| !! | AAATAAGTATCATTAAACTG+AGG | - | chr6_1:90580971-90580990 | None:intergenic | 20.0% |
| !!! | AATTCACATAAAGATTTTTC+AGG | - | chr6_1:90581073-90581092 | None:intergenic | 20.0% |
| !!! | TAAACTCTGTTTTATTGATA+AGG | - | chr6_1:90579306-90579325 | None:intergenic | 20.0% |
| !! | AAGTATCAATTGTTCTTATT+TGG | - | chr6_1:90579722-90579741 | None:intergenic | 20.0% |
| !! | CAAAATGAAAAGAATAATGA+AGG | + | chr6_1:90579913-90579932 | Msa0897950:intron | 20.0% |
| !!! | GTTTTTAATTTACTTACGAT+AGG | - | chr6_1:90579981-90580000 | None:intergenic | 20.0% |
| !! | TCATCACATAGAAAAAAATT+AGG | + | chr6_1:90580023-90580042 | Msa0897950:intron | 20.0% |
| !! | CATCACATAGAAAAAAATTA+GGG | + | chr6_1:90580024-90580043 | Msa0897950:intron | 20.0% |
| !!! | TTGGTTCATTTTATATATAG+TGG | + | chr6_1:90580451-90580470 | Msa0897950:intron | 20.0% |
| !!! | ATAACAAAATGGTAGTATTT+TGG | - | chr6_1:90580859-90580878 | None:intergenic | 20.0% |
| !!! | ATTTTGTGAAGATAACAAAA+TGG | - | chr6_1:90580870-90580889 | None:intergenic | 20.0% |
| !! | AAATAAGTATCATTAAACTG+AGG | - | chr6_1:90580971-90580990 | None:intergenic | 20.0% |
| !!! | AATTCACATAAAGATTTTTC+AGG | - | chr6_1:90581073-90581092 | None:intergenic | 20.0% |
| !!! | AATTTTAAGACATCAATCAG+TGG | + | chr6_1:90579254-90579273 | Msa0897950:intron | 25.0% |
| ! | AGTATCAATAGAAGATGATT+AGG | + | chr6_1:90579574-90579593 | Msa0897950:intron | 25.0% |
| !!! | AAGAGTTTTATACTTGTGTT+AGG | + | chr6_1:90579612-90579631 | Msa0897950:intron | 25.0% |
| ! | TGTGAAAATTACTATCACTA+TGG | - | chr6_1:90579683-90579702 | None:intergenic | 25.0% |
| !! | TTAATTTGGGACAATTTACT+TGG | - | chr6_1:90579781-90579800 | None:intergenic | 25.0% |
| ! | TGGAACAACAACATTAATTT+GGG | - | chr6_1:90579794-90579813 | None:intergenic | 25.0% |
| ! | ATGGAACAACAACATTAATT+TGG | - | chr6_1:90579795-90579814 | None:intergenic | 25.0% |
| ! | TTCTTTACTTATGCATTTCA+GGG | - | chr6_1:90579821-90579840 | None:intergenic | 25.0% |
| ! | AAGGAAGTTGAAAATAATAG+AGG | + | chr6_1:90579839-90579858 | Msa0897950:intron | 25.0% |
| ! | ATGAAAAGAATAATGAAGGA+AGG | + | chr6_1:90579917-90579936 | Msa0897950:intron | 25.0% |
| ! | CAAGATTAATTTATGAAGCA+CGG | + | chr6_1:90579951-90579970 | Msa0897950:intron | 25.0% |
| ! | TACTAATAAACTTTGATGTG+TGG | + | chr6_1:90580146-90580165 | Msa0897950:intron | 25.0% |
| ! | AATTTGATGTTAATGCTCTT+AGG | + | chr6_1:90580263-90580282 | Msa0897950:intron | 25.0% |
| ! | ATATGCTTATCCATTATGTT+CGG | - | chr6_1:90580585-90580604 | None:intergenic | 25.0% |
| ! | ATGTAATATTCATGAGCATA+GGG | - | chr6_1:90580608-90580627 | None:intergenic | 25.0% |
| ! | TATGTAATATTCATGAGCAT+AGG | - | chr6_1:90580609-90580628 | None:intergenic | 25.0% |
| !!! | AAAGATTTTTCAGGTGAAAA+AGG | - | chr6_1:90581064-90581083 | None:intergenic | 25.0% |
| ! | TAATAATCATCTTTCACAAC+AGG | - | chr6_1:90581196-90581215 | None:intergenic | 25.0% |
| !! | GATCATGATTTTCTTGAAAA+TGG | + | chr6_1:90581226-90581245 | Msa0897950:CDS | 25.0% |
| !!! | AATTTTAAGACATCAATCAG+TGG | + | chr6_1:90579254-90579273 | Msa0897950:intron | 25.0% |
| ! | AGTATCAATAGAAGATGATT+AGG | + | chr6_1:90579574-90579593 | Msa0897950:intron | 25.0% |
| !!! | AAGAGTTTTATACTTGTGTT+AGG | + | chr6_1:90579612-90579631 | Msa0897950:intron | 25.0% |
| ! | TGTGAAAATTACTATCACTA+TGG | - | chr6_1:90579683-90579702 | None:intergenic | 25.0% |
| !! | TTAATTTGGGACAATTTACT+TGG | - | chr6_1:90579781-90579800 | None:intergenic | 25.0% |
| ! | TGGAACAACAACATTAATTT+GGG | - | chr6_1:90579794-90579813 | None:intergenic | 25.0% |
| ! | ATGGAACAACAACATTAATT+TGG | - | chr6_1:90579795-90579814 | None:intergenic | 25.0% |
| ! | TTCTTTACTTATGCATTTCA+GGG | - | chr6_1:90579821-90579840 | None:intergenic | 25.0% |
| ! | AAGGAAGTTGAAAATAATAG+AGG | + | chr6_1:90579839-90579858 | Msa0897950:intron | 25.0% |
| ! | ATGAAAAGAATAATGAAGGA+AGG | + | chr6_1:90579917-90579936 | Msa0897950:intron | 25.0% |
| ! | CAAGATTAATTTATGAAGCA+CGG | + | chr6_1:90579951-90579970 | Msa0897950:intron | 25.0% |
| ! | TACTAATAAACTTTGATGTG+TGG | + | chr6_1:90580146-90580165 | Msa0897950:intron | 25.0% |
| ! | AATTTGATGTTAATGCTCTT+AGG | + | chr6_1:90580263-90580282 | Msa0897950:intron | 25.0% |
| ! | ATATGCTTATCCATTATGTT+CGG | - | chr6_1:90580585-90580604 | None:intergenic | 25.0% |
| ! | ATGTAATATTCATGAGCATA+GGG | - | chr6_1:90580608-90580627 | None:intergenic | 25.0% |
| ! | TATGTAATATTCATGAGCAT+AGG | - | chr6_1:90580609-90580628 | None:intergenic | 25.0% |
| !!! | AAAGATTTTTCAGGTGAAAA+AGG | - | chr6_1:90581064-90581083 | None:intergenic | 25.0% |
| ! | TAATAATCATCTTTCACAAC+AGG | - | chr6_1:90581196-90581215 | None:intergenic | 25.0% |
| !! | GATCATGATTTTCTTGAAAA+TGG | + | chr6_1:90581226-90581245 | Msa0897950:CDS | 25.0% |
| AGTAACATAGAAGTCAAGTT+TGG | - | chr6_1:90579330-90579349 | None:intergenic | 30.0% | |
| AACTTGACTTCTATGTTACT+TGG | + | chr6_1:90579330-90579349 | Msa0897950:intron | 30.0% | |
| ! | TTATGCACTCAATGTTTTAC+AGG | + | chr6_1:90579445-90579464 | Msa0897950:intron | 30.0% |
| ! | CAATGTTTTACAGGTTTTAC+AGG | + | chr6_1:90579454-90579473 | Msa0897950:intron | 30.0% |
| ATGATCATGAAACCTTGAAT+TGG | - | chr6_1:90579495-90579514 | None:intergenic | 30.0% | |
| TCAAGGTTTCATGATCATAT+AGG | + | chr6_1:90579497-90579516 | Msa0897950:intron | 30.0% | |
| TGATACTTCAAAGTGATAAG+TGG | + | chr6_1:90579734-90579753 | Msa0897950:intron | 30.0% | |
| CTTCTTTACTTATGCATTTC+AGG | - | chr6_1:90579822-90579841 | None:intergenic | 30.0% | |
| CTGAAATGCATAAGTAAAGA+AGG | + | chr6_1:90579820-90579839 | Msa0897950:intron | 30.0% | |
| AGAGAGAAATATAGTAAGGA+AGG | + | chr6_1:90579862-90579881 | Msa0897950:intron | 30.0% | |
| ! | CTTATTGCTTGCAATTGTTT+TGG | - | chr6_1:90580197-90580216 | None:intergenic | 30.0% |
| AATCGCTTAAGCCTAATTAT+TGG | + | chr6_1:90580387-90580406 | Msa0897950:intron | 30.0% | |
| ATCGCTTAAGCCTAATTATT+GGG | + | chr6_1:90580388-90580407 | Msa0897950:intron | 30.0% | |
| TCATGTTCAACCCAATAATT+AGG | - | chr6_1:90580401-90580420 | None:intergenic | 30.0% | |
| GAAGAATAAAAAATGAGGAG+GGG | - | chr6_1:90580559-90580578 | None:intergenic | 30.0% | |
| CGAAGAATAAAAAATGAGGA+GGG | - | chr6_1:90580560-90580579 | None:intergenic | 30.0% | |
| ACGAAGAATAAAAAATGAGG+AGG | - | chr6_1:90580561-90580580 | None:intergenic | 30.0% | |
| GGAACGAAGAATAAAAAATG+AGG | - | chr6_1:90580564-90580583 | None:intergenic | 30.0% | |
| GAATAATCGTTAACTGATTG+TGG | - | chr6_1:90580707-90580726 | None:intergenic | 30.0% | |
| ATACAAAACTCCTATAACTG+TGG | + | chr6_1:90580740-90580759 | Msa0897950:CDS | 30.0% | |
| !! | GAGAACAAAGATTTTGATCA+AGG | - | chr6_1:90580949-90580968 | None:intergenic | 30.0% |
| ! | ACAGTATAGAAAGCATGATT+TGG | - | chr6_1:90581097-90581116 | None:intergenic | 30.0% |
| AATCATGCTTTCTATACTGT+TGG | + | chr6_1:90581097-90581116 | Msa0897950:CDS | 30.0% | |
| ATAAGTTGTTGGAAGAATCA+AGG | + | chr6_1:90581128-90581147 | Msa0897950:CDS | 30.0% | |
| ! | TCTTGAAAATGGTTTGCATA+AGG | + | chr6_1:90581237-90581256 | Msa0897950:CDS | 30.0% |
| ! | CTTGAAAATGGTTTGCATAA+GGG | + | chr6_1:90581238-90581257 | Msa0897950:CDS | 30.0% |
| ! | TTGAAAATGGTTTGCATAAG+GGG | + | chr6_1:90581239-90581258 | Msa0897950:CDS | 30.0% |
| ATCTGAAAGAAGAATGCTTA+AGG | + | chr6_1:90581278-90581297 | Msa0897950:CDS | 30.0% | |
| ATGTTTCTCAATAGCATCAT+TGG | - | chr6_1:90581341-90581360 | None:intergenic | 30.0% | |
| AGTAACATAGAAGTCAAGTT+TGG | - | chr6_1:90579330-90579349 | None:intergenic | 30.0% | |
| AACTTGACTTCTATGTTACT+TGG | + | chr6_1:90579330-90579349 | Msa0897950:intron | 30.0% | |
| ! | TTATGCACTCAATGTTTTAC+AGG | + | chr6_1:90579445-90579464 | Msa0897950:intron | 30.0% |
| ! | CAATGTTTTACAGGTTTTAC+AGG | + | chr6_1:90579454-90579473 | Msa0897950:intron | 30.0% |
| ATGATCATGAAACCTTGAAT+TGG | - | chr6_1:90579495-90579514 | None:intergenic | 30.0% | |
| TCAAGGTTTCATGATCATAT+AGG | + | chr6_1:90579497-90579516 | Msa0897950:intron | 30.0% | |
| TGATACTTCAAAGTGATAAG+TGG | + | chr6_1:90579734-90579753 | Msa0897950:intron | 30.0% | |
| CTTCTTTACTTATGCATTTC+AGG | - | chr6_1:90579822-90579841 | None:intergenic | 30.0% | |
| CTGAAATGCATAAGTAAAGA+AGG | + | chr6_1:90579820-90579839 | Msa0897950:intron | 30.0% | |
| AGAGAGAAATATAGTAAGGA+AGG | + | chr6_1:90579862-90579881 | Msa0897950:intron | 30.0% | |
| ! | CTTATTGCTTGCAATTGTTT+TGG | - | chr6_1:90580197-90580216 | None:intergenic | 30.0% |
| AATCGCTTAAGCCTAATTAT+TGG | + | chr6_1:90580387-90580406 | Msa0897950:intron | 30.0% | |
| ATCGCTTAAGCCTAATTATT+GGG | + | chr6_1:90580388-90580407 | Msa0897950:intron | 30.0% | |
| TCATGTTCAACCCAATAATT+AGG | - | chr6_1:90580401-90580420 | None:intergenic | 30.0% | |
| GAAGAATAAAAAATGAGGAG+GGG | - | chr6_1:90580559-90580578 | None:intergenic | 30.0% | |
| CGAAGAATAAAAAATGAGGA+GGG | - | chr6_1:90580560-90580579 | None:intergenic | 30.0% | |
| ACGAAGAATAAAAAATGAGG+AGG | - | chr6_1:90580561-90580580 | None:intergenic | 30.0% | |
| GGAACGAAGAATAAAAAATG+AGG | - | chr6_1:90580564-90580583 | None:intergenic | 30.0% | |
| GAATAATCGTTAACTGATTG+TGG | - | chr6_1:90580707-90580726 | None:intergenic | 30.0% | |
| ATACAAAACTCCTATAACTG+TGG | + | chr6_1:90580740-90580759 | Msa0897950:CDS | 30.0% | |
| !! | GAGAACAAAGATTTTGATCA+AGG | - | chr6_1:90580949-90580968 | None:intergenic | 30.0% |
| ! | ACAGTATAGAAAGCATGATT+TGG | - | chr6_1:90581097-90581116 | None:intergenic | 30.0% |
| AATCATGCTTTCTATACTGT+TGG | + | chr6_1:90581097-90581116 | Msa0897950:CDS | 30.0% | |
| ATAAGTTGTTGGAAGAATCA+AGG | + | chr6_1:90581128-90581147 | Msa0897950:CDS | 30.0% | |
| ! | TCTTGAAAATGGTTTGCATA+AGG | + | chr6_1:90581237-90581256 | Msa0897950:CDS | 30.0% |
| ! | CTTGAAAATGGTTTGCATAA+GGG | + | chr6_1:90581238-90581257 | Msa0897950:CDS | 30.0% |
| ! | TTGAAAATGGTTTGCATAAG+GGG | + | chr6_1:90581239-90581258 | Msa0897950:CDS | 30.0% |
| ATCTGAAAGAAGAATGCTTA+AGG | + | chr6_1:90581278-90581297 | Msa0897950:CDS | 30.0% | |
| ATGTTTCTCAATAGCATCAT+TGG | - | chr6_1:90581341-90581360 | None:intergenic | 30.0% | |
| AGTCTGTAAAACCTGTTTCA+TGG | + | chr6_1:90579388-90579407 | Msa0897950:intron | 35.0% | |
| TGTAAAACCTGTTTCATGGT+CGG | + | chr6_1:90579392-90579411 | Msa0897950:intron | 35.0% | |
| GTACTTCTTGAATTTGTGGT+TGG | - | chr6_1:90579638-90579657 | None:intergenic | 35.0% | |
| ACTGGTACTTCTTGAATTTG+TGG | - | chr6_1:90579642-90579661 | None:intergenic | 35.0% | |
| AGTACCAGTAGTAAGAGTTT+CGG | + | chr6_1:90579653-90579672 | Msa0897950:intron | 35.0% | |
| GAGGAGAGAGAAATATAGTA+AGG | + | chr6_1:90579858-90579877 | Msa0897950:intron | 35.0% | |
| CTATGTGATGAATCAGTCAA+GGG | - | chr6_1:90580014-90580033 | None:intergenic | 35.0% | |
| TCTATGTGATGAATCAGTCA+AGG | - | chr6_1:90580015-90580034 | None:intergenic | 35.0% | |
| ATCAATTGTATCCTCGTTAC+GGG | - | chr6_1:90580102-90580121 | None:intergenic | 35.0% | |
| CATCAATTGTATCCTCGTTA+CGG | - | chr6_1:90580103-90580122 | None:intergenic | 35.0% | |
| !!! | CTTGCAATTGTTTTGGTCAT+TGG | - | chr6_1:90580190-90580209 | None:intergenic | 35.0% |
| TGTTAATGCTCTTAGGAGAA+AGG | + | chr6_1:90580270-90580289 | Msa0897950:intron | 35.0% | |
| GTTAATGCTCTTAGGAGAAA+GGG | + | chr6_1:90580271-90580290 | Msa0897950:intron | 35.0% | |
| TGAACCAAAACGTGACAAAT+GGG | - | chr6_1:90580439-90580458 | None:intergenic | 35.0% | |
| ATGAACCAAAACGTGACAAA+TGG | - | chr6_1:90580440-90580459 | None:intergenic | 35.0% | |
| CTCAGCAAAAATGATTCTCA+TGG | - | chr6_1:90580511-90580530 | None:intergenic | 35.0% | |
| ATTCTTCGTTCCGAACATAA+TGG | + | chr6_1:90580572-90580591 | Msa0897950:intron | 35.0% | |
| ! | GTTTTGTATGTCTCTACAAG+TGG | - | chr6_1:90580729-90580748 | None:intergenic | 35.0% |
| CAACATCTCTTATCCATTCT+GGG | + | chr6_1:90580772-90580791 | Msa0897950:CDS | 35.0% | |
| AACATCTCTTATCCATTCTG+GGG | + | chr6_1:90580773-90580792 | Msa0897950:CDS | 35.0% | |
| !!! | TGGTAGTATTTTGGTTGTTG+TGG | - | chr6_1:90580850-90580869 | None:intergenic | 35.0% |
| !!! | GTCTGTTCTTTTGAGTTTGA+TGG | - | chr6_1:90580927-90580946 | None:intergenic | 35.0% |
| TGAAGATATTGAAACAGAGG+TGG | - | chr6_1:90580998-90581017 | None:intergenic | 35.0% | |
| GGTTGAAGATATTGAAACAG+AGG | - | chr6_1:90581001-90581020 | None:intergenic | 35.0% | |
| AATACAGTGATGTTGTTGAC+AGG | - | chr6_1:90581022-90581041 | None:intergenic | 35.0% | |
| !!! | TTTTCAGGTGAAAAAGGAGA+TGG | - | chr6_1:90581058-90581077 | None:intergenic | 35.0% |
| ! | TGGTGATGAAGATAAGTTGT+TGG | + | chr6_1:90581117-90581136 | Msa0897950:CDS | 35.0% |
| ! | AGAAGAATGCTTAAGGTGTT+TGG | + | chr6_1:90581285-90581304 | Msa0897950:CDS | 35.0% |
| ! | GAAGAATGCTTAAGGTGTTT+GGG | + | chr6_1:90581286-90581305 | Msa0897950:CDS | 35.0% |
| TCGTAAATCGTAATAGCAAG+TGG | - | chr6_1:90581371-90581390 | None:intergenic | 35.0% | |
| AGTCTGTAAAACCTGTTTCA+TGG | + | chr6_1:90579388-90579407 | Msa0897950:intron | 35.0% | |
| TGTAAAACCTGTTTCATGGT+CGG | + | chr6_1:90579392-90579411 | Msa0897950:intron | 35.0% | |
| GTACTTCTTGAATTTGTGGT+TGG | - | chr6_1:90579638-90579657 | None:intergenic | 35.0% | |
| ACTGGTACTTCTTGAATTTG+TGG | - | chr6_1:90579642-90579661 | None:intergenic | 35.0% | |
| AGTACCAGTAGTAAGAGTTT+CGG | + | chr6_1:90579653-90579672 | Msa0897950:intron | 35.0% | |
| GAGGAGAGAGAAATATAGTA+AGG | + | chr6_1:90579858-90579877 | Msa0897950:intron | 35.0% | |
| CTATGTGATGAATCAGTCAA+GGG | - | chr6_1:90580014-90580033 | None:intergenic | 35.0% | |
| TCTATGTGATGAATCAGTCA+AGG | - | chr6_1:90580015-90580034 | None:intergenic | 35.0% | |
| ATCAATTGTATCCTCGTTAC+GGG | - | chr6_1:90580102-90580121 | None:intergenic | 35.0% | |
| CATCAATTGTATCCTCGTTA+CGG | - | chr6_1:90580103-90580122 | None:intergenic | 35.0% | |
| !!! | CTTGCAATTGTTTTGGTCAT+TGG | - | chr6_1:90580190-90580209 | None:intergenic | 35.0% |
| TGTTAATGCTCTTAGGAGAA+AGG | + | chr6_1:90580270-90580289 | Msa0897950:intron | 35.0% | |
| GTTAATGCTCTTAGGAGAAA+GGG | + | chr6_1:90580271-90580290 | Msa0897950:intron | 35.0% | |
| TGAACCAAAACGTGACAAAT+GGG | - | chr6_1:90580439-90580458 | None:intergenic | 35.0% | |
| ATGAACCAAAACGTGACAAA+TGG | - | chr6_1:90580440-90580459 | None:intergenic | 35.0% | |
| CTCAGCAAAAATGATTCTCA+TGG | - | chr6_1:90580511-90580530 | None:intergenic | 35.0% | |
| ATTCTTCGTTCCGAACATAA+TGG | + | chr6_1:90580572-90580591 | Msa0897950:intron | 35.0% | |
| ! | GTTTTGTATGTCTCTACAAG+TGG | - | chr6_1:90580729-90580748 | None:intergenic | 35.0% |
| CAACATCTCTTATCCATTCT+GGG | + | chr6_1:90580772-90580791 | Msa0897950:CDS | 35.0% | |
| AACATCTCTTATCCATTCTG+GGG | + | chr6_1:90580773-90580792 | Msa0897950:CDS | 35.0% | |
| !!! | TGGTAGTATTTTGGTTGTTG+TGG | - | chr6_1:90580850-90580869 | None:intergenic | 35.0% |
| !!! | GTCTGTTCTTTTGAGTTTGA+TGG | - | chr6_1:90580927-90580946 | None:intergenic | 35.0% |
| TGAAGATATTGAAACAGAGG+TGG | - | chr6_1:90580998-90581017 | None:intergenic | 35.0% | |
| GGTTGAAGATATTGAAACAG+AGG | - | chr6_1:90581001-90581020 | None:intergenic | 35.0% | |
| AATACAGTGATGTTGTTGAC+AGG | - | chr6_1:90581022-90581041 | None:intergenic | 35.0% | |
| !!! | TTTTCAGGTGAAAAAGGAGA+TGG | - | chr6_1:90581058-90581077 | None:intergenic | 35.0% |
| ! | TGGTGATGAAGATAAGTTGT+TGG | + | chr6_1:90581117-90581136 | Msa0897950:CDS | 35.0% |
| ! | AGAAGAATGCTTAAGGTGTT+TGG | + | chr6_1:90581285-90581304 | Msa0897950:CDS | 35.0% |
| ! | GAAGAATGCTTAAGGTGTTT+GGG | + | chr6_1:90581286-90581305 | Msa0897950:CDS | 35.0% |
| TCGTAAATCGTAATAGCAAG+TGG | - | chr6_1:90581371-90581390 | None:intergenic | 35.0% | |
| ! | CAGGTTTTACAGACTCTAGA+GGG | - | chr6_1:90579383-90579402 | None:intergenic | 40.0% |
| ! | ACAGGTTTTACAGACTCTAG+AGG | - | chr6_1:90579384-90579403 | None:intergenic | 40.0% |
| TACGATTCGTCTCCAATTCA+AGG | + | chr6_1:90579480-90579499 | Msa0897950:intron | 40.0% | |
| ACATCCGAAACTCTTACTAC+TGG | - | chr6_1:90579660-90579679 | None:intergenic | 40.0% | |
| GACAATTTACTTGGTTCCCA+AGG | - | chr6_1:90579772-90579791 | None:intergenic | 40.0% | |
| AGAATAATGAAGGAAGGAGC+AGG | + | chr6_1:90579923-90579942 | Msa0897950:intron | 40.0% | |
| GAATAATGAAGGAAGGAGCA+GGG | + | chr6_1:90579924-90579943 | Msa0897950:intron | 40.0% | |
| GGGAAGGTGAACTTTAATCT+AGG | - | chr6_1:90580082-90580101 | None:intergenic | 40.0% | |
| AAACTTTGATGTGTGGAGCA+AGG | + | chr6_1:90580153-90580172 | Msa0897950:intron | 40.0% | |
| AACTTTGATGTGTGGAGCAA+GGG | + | chr6_1:90580154-90580173 | Msa0897950:intron | 40.0% | |
| GAACCAAAACGTGACAAATG+GGG | - | chr6_1:90580438-90580457 | None:intergenic | 40.0% | |
| ACTGATTGTGGTAGTTTCTG+TGG | - | chr6_1:90580695-90580714 | None:intergenic | 40.0% | |
| GGTGATATGTCCACAGTTAT+AGG | - | chr6_1:90580753-90580772 | None:intergenic | 40.0% | |
| CCAGAATGGATAAGAGATGT+TGG | - | chr6_1:90580774-90580793 | None:intergenic | 40.0% | |
| CCAACATCTCTTATCCATTC+TGG | + | chr6_1:90580771-90580790 | Msa0897950:CDS | 40.0% | |
| ! | GAAAATCGTCCTTTTCGTTG+TGG | + | chr6_1:90580797-90580816 | Msa0897950:CDS | 40.0% |
| TGTGGCAGTAAAGGTGATAA+GGG | - | chr6_1:90580832-90580851 | None:intergenic | 40.0% | |
| TTGTGGCAGTAAAGGTGATA+AGG | - | chr6_1:90580833-90580852 | None:intergenic | 40.0% | |
| TTTGGTTGTTGTGGCAGTAA+AGG | - | chr6_1:90580841-90580860 | None:intergenic | 40.0% | |
| AGACATATTCAAGTGCCAGT+AGG | + | chr6_1:90581160-90581179 | Msa0897950:CDS | 40.0% | |
| ACAGGAAAATCTGTTCCTAC+TGG | - | chr6_1:90581178-90581197 | None:intergenic | 40.0% | |
| ! | TTAAGGTGTTTGGGAAGTGA+AGG | + | chr6_1:90581295-90581314 | Msa0897950:CDS | 40.0% |
| GTGAAGGAGGAGATTGTAAA+TGG | + | chr6_1:90581311-90581330 | Msa0897950:CDS | 40.0% | |
| ! | CAGGTTTTACAGACTCTAGA+GGG | - | chr6_1:90579383-90579402 | None:intergenic | 40.0% |
| ! | ACAGGTTTTACAGACTCTAG+AGG | - | chr6_1:90579384-90579403 | None:intergenic | 40.0% |
| TACGATTCGTCTCCAATTCA+AGG | + | chr6_1:90579480-90579499 | Msa0897950:intron | 40.0% | |
| ACATCCGAAACTCTTACTAC+TGG | - | chr6_1:90579660-90579679 | None:intergenic | 40.0% | |
| GACAATTTACTTGGTTCCCA+AGG | - | chr6_1:90579772-90579791 | None:intergenic | 40.0% | |
| AGAATAATGAAGGAAGGAGC+AGG | + | chr6_1:90579923-90579942 | Msa0897950:intron | 40.0% | |
| GAATAATGAAGGAAGGAGCA+GGG | + | chr6_1:90579924-90579943 | Msa0897950:intron | 40.0% | |
| GGGAAGGTGAACTTTAATCT+AGG | - | chr6_1:90580082-90580101 | None:intergenic | 40.0% | |
| AAACTTTGATGTGTGGAGCA+AGG | + | chr6_1:90580153-90580172 | Msa0897950:intron | 40.0% | |
| AACTTTGATGTGTGGAGCAA+GGG | + | chr6_1:90580154-90580173 | Msa0897950:intron | 40.0% | |
| GAACCAAAACGTGACAAATG+GGG | - | chr6_1:90580438-90580457 | None:intergenic | 40.0% | |
| ACTGATTGTGGTAGTTTCTG+TGG | - | chr6_1:90580695-90580714 | None:intergenic | 40.0% | |
| GGTGATATGTCCACAGTTAT+AGG | - | chr6_1:90580753-90580772 | None:intergenic | 40.0% | |
| CCAGAATGGATAAGAGATGT+TGG | - | chr6_1:90580774-90580793 | None:intergenic | 40.0% | |
| CCAACATCTCTTATCCATTC+TGG | + | chr6_1:90580771-90580790 | Msa0897950:CDS | 40.0% | |
| ! | GAAAATCGTCCTTTTCGTTG+TGG | + | chr6_1:90580797-90580816 | Msa0897950:CDS | 40.0% |
| TGTGGCAGTAAAGGTGATAA+GGG | - | chr6_1:90580832-90580851 | None:intergenic | 40.0% | |
| TTGTGGCAGTAAAGGTGATA+AGG | - | chr6_1:90580833-90580852 | None:intergenic | 40.0% | |
| TTTGGTTGTTGTGGCAGTAA+AGG | - | chr6_1:90580841-90580860 | None:intergenic | 40.0% | |
| AGACATATTCAAGTGCCAGT+AGG | + | chr6_1:90581160-90581179 | Msa0897950:CDS | 40.0% | |
| ACAGGAAAATCTGTTCCTAC+TGG | - | chr6_1:90581178-90581197 | None:intergenic | 40.0% | |
| ! | TTAAGGTGTTTGGGAAGTGA+AGG | + | chr6_1:90581295-90581314 | Msa0897950:CDS | 40.0% |
| GTGAAGGAGGAGATTGTAAA+TGG | + | chr6_1:90581311-90581330 | Msa0897950:CDS | 40.0% | |
| GGCATAAGCAAAGGGAAATG+GGG | - | chr6_1:90579362-90579381 | None:intergenic | 45.0% | |
| GGGCATAAGCAAAGGGAAAT+GGG | - | chr6_1:90579363-90579382 | None:intergenic | 45.0% | |
| AGGGCATAAGCAAAGGGAAA+TGG | - | chr6_1:90579364-90579383 | None:intergenic | 45.0% | |
| ! | CTCTAGAGGGCATAAGCAAA+GGG | - | chr6_1:90579370-90579389 | None:intergenic | 45.0% |
| ! | ACTCTAGAGGGCATAAGCAA+AGG | - | chr6_1:90579371-90579390 | None:intergenic | 45.0% |
| CTTATGCATTTCAGGGCAGA+TGG | - | chr6_1:90579814-90579833 | None:intergenic | 45.0% | |
| ATTGTATCCTCGTTACGGGA+AGG | - | chr6_1:90580098-90580117 | None:intergenic | 45.0% | |
| ! | ATGCCCCATTTGTCACGTTT+TGG | + | chr6_1:90580432-90580451 | Msa0897950:intron | 45.0% |
| GGCATAAGCAAAGGGAAATG+GGG | - | chr6_1:90579362-90579381 | None:intergenic | 45.0% | |
| GGGCATAAGCAAAGGGAAAT+GGG | - | chr6_1:90579363-90579382 | None:intergenic | 45.0% | |
| AGGGCATAAGCAAAGGGAAA+TGG | - | chr6_1:90579364-90579383 | None:intergenic | 45.0% | |
| ! | CTCTAGAGGGCATAAGCAAA+GGG | - | chr6_1:90579370-90579389 | None:intergenic | 45.0% |
| ! | ACTCTAGAGGGCATAAGCAA+AGG | - | chr6_1:90579371-90579390 | None:intergenic | 45.0% |
| CTTATGCATTTCAGGGCAGA+TGG | - | chr6_1:90579814-90579833 | None:intergenic | 45.0% | |
| ATTGTATCCTCGTTACGGGA+AGG | - | chr6_1:90580098-90580117 | None:intergenic | 45.0% | |
| ! | ATGCCCCATTTGTCACGTTT+TGG | + | chr6_1:90580432-90580451 | Msa0897950:intron | 45.0% |
| TGCAATGTCCCAAGGAACTC+AGG | - | chr6_1:90579418-90579437 | None:intergenic | 50.0% | |
| TCCTTGGGACATTGCACTCA+AGG | + | chr6_1:90579422-90579441 | Msa0897950:intron | 50.0% | |
| ACCTTGAGTGCAATGTCCCA+AGG | - | chr6_1:90579426-90579445 | None:intergenic | 50.0% | |
| AGTGGTGACAGAACGTACCT+TGG | + | chr6_1:90579752-90579771 | Msa0897950:intron | 50.0% | |
| GTGGTGACAGAACGTACCTT+GGG | + | chr6_1:90579753-90579772 | Msa0897950:intron | 50.0% | |
| AAGTTCACCTTCCCGTAACG+AGG | + | chr6_1:90580088-90580107 | Msa0897950:intron | 50.0% | |
| ! | GGAGGGGATGAGTTGAGTTA+TGG | - | chr6_1:90580543-90580562 | None:intergenic | 50.0% |
| ! | GGACGATTTTCTCCCCAGAA+TGG | - | chr6_1:90580788-90580807 | None:intergenic | 50.0% |
| TTGCCAGCACCACAACGAAA+AGG | - | chr6_1:90580809-90580828 | None:intergenic | 50.0% | |
| AGGTGTTTGGGAAGTGAAGG+AGG | + | chr6_1:90581298-90581317 | Msa0897950:CDS | 50.0% | |
| TGCAATGTCCCAAGGAACTC+AGG | - | chr6_1:90579418-90579437 | None:intergenic | 50.0% | |
| TCCTTGGGACATTGCACTCA+AGG | + | chr6_1:90579422-90579441 | Msa0897950:intron | 50.0% | |
| ACCTTGAGTGCAATGTCCCA+AGG | - | chr6_1:90579426-90579445 | None:intergenic | 50.0% | |
| AGTGGTGACAGAACGTACCT+TGG | + | chr6_1:90579752-90579771 | Msa0897950:intron | 50.0% | |
| GTGGTGACAGAACGTACCTT+GGG | + | chr6_1:90579753-90579772 | Msa0897950:intron | 50.0% | |
| AAGTTCACCTTCCCGTAACG+AGG | + | chr6_1:90580088-90580107 | Msa0897950:intron | 50.0% | |
| ! | GGAGGGGATGAGTTGAGTTA+TGG | - | chr6_1:90580543-90580562 | None:intergenic | 50.0% |
| ! | GGACGATTTTCTCCCCAGAA+TGG | - | chr6_1:90580788-90580807 | None:intergenic | 50.0% |
| TTGCCAGCACCACAACGAAA+AGG | - | chr6_1:90580809-90580828 | None:intergenic | 50.0% | |
| AGGTGTTTGGGAAGTGAAGG+AGG | + | chr6_1:90581298-90581317 | Msa0897950:CDS | 50.0% | |
| ACTCAGGCCGACCATGAAAC+AGG | - | chr6_1:90579402-90579421 | None:intergenic | 55.0% | |
| ATGGTCGGCCTGAGTTCCTT+GGG | + | chr6_1:90579407-90579426 | Msa0897950:intron | 55.0% | |
| ! | GGCTGAGAGTGCGATTGATG+TGG | - | chr6_1:90580674-90580693 | None:intergenic | 55.0% |
| ! | CGTCCTTTTCGTTGTGGTGC+TGG | + | chr6_1:90580803-90580822 | Msa0897950:CDS | 55.0% |
| ACTCAGGCCGACCATGAAAC+AGG | - | chr6_1:90579402-90579421 | None:intergenic | 55.0% | |
| ATGGTCGGCCTGAGTTCCTT+GGG | + | chr6_1:90579407-90579426 | Msa0897950:intron | 55.0% | |
| ! | GGCTGAGAGTGCGATTGATG+TGG | - | chr6_1:90580674-90580693 | None:intergenic | 55.0% |
| ! | CGTCCTTTTCGTTGTGGTGC+TGG | + | chr6_1:90580803-90580822 | Msa0897950:CDS | 55.0% |
| CATGGTCGGCCTGAGTTCCT+TGG | + | chr6_1:90579406-90579425 | Msa0897950:intron | 60.0% | |
| CATGGTCGGCCTGAGTTCCT+TGG | + | chr6_1:90579406-90579425 | Msa0897950:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_1 | gene | 90579232 | 90581393 | 90579232 | ID=Msa0897950;Name=Msa0897950 |
| chr6_1 | mRNA | 90579232 | 90581393 | 90579232 | ID=Msa0897950-mRNA-1;Parent=Msa0897950;Name=Msa0897950-mRNA-1;_AED=0.39;_eAED=0.41;_QI=0|0|0|1|0|0|2|0|249 |
| chr6_1 | exon | 90579232 | 90579238 | 90579232 | ID=Msa0897950-mRNA-1:exon:15418;Parent=Msa0897950-mRNA-1 |
| chr6_1 | exon | 90580651 | 90581393 | 90580651 | ID=Msa0897950-mRNA-1:exon:15419;Parent=Msa0897950-mRNA-1 |
| chr6_1 | CDS | 90579232 | 90579238 | 90579232 | ID=Msa0897950-mRNA-1:cds;Parent=Msa0897950-mRNA-1 |
| chr6_1 | CDS | 90580651 | 90581393 | 90580651 | ID=Msa0897950-mRNA-1:cds;Parent=Msa0897950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
