Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0910990 | XP_003588865.1 | 82.550 | 149 | 8 | 2 | 1 | 131 | 1 | 149 | 7.09e-75 | 231 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006000 | Msa0910990 | 0.820792 | 5.687146e-53 | -8.615850e-47 |
| Msa0054700 | Msa0910990 | 0.842403 | 2.642098e-58 | -8.615850e-47 |
| Msa0661160 | Msa0910990 | 0.853363 | 2.511014e-61 | -8.615850e-47 |
| Msa0241640 | Msa0910990 | 0.801571 | 8.455869e-49 | -8.615850e-47 |
| Msa0891740 | Msa0910990 | 0.931777 | 2.284678e-94 | -8.615850e-47 |
| Msa0910990 | Msa0956530 | 0.834652 | 2.648127e-56 | -8.615850e-47 |
| Msa0910990 | Msa1359680 | 0.927510 | 1.062373e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0910990 | MtrunA17_Chr1g0150121 | 82.550 | 149 | 8 | 2 | 1 | 131 | 1 | 149 | 6.52e-79 | 231 |
| Msa0910990 | MtrunA17_Chr3g0136861 | 33.529 | 170 | 61 | 4 | 1 | 119 | 1 | 169 | 1.66e-16 | 73.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 50 sgRNAs with CRISPR-Local
Find 293 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GATTCTATTGTTGTTGATTC+TGG | 0.208831 | 6_2:-16144397 | None:intergenic |
| TTCTCACCATTTGGGTTCTT+AGG | 0.223638 | 6_2:+16148723 | Msa0910990:three_prime_UTR |
| CTGTCTGCGTTTGAGTTTCA+TGG | 0.247458 | 6_2:+16148687 | Msa0910990:three_prime_UTR |
| TGAAATACGAACATTCAAAA+AGG | 0.266282 | 6_2:-16144564 | None:intergenic |
| TTCAGCGTCCTTGTTGCTTT+GGG | 0.275461 | 6_2:+16148378 | Msa0910990:CDS |
| AGATGAATGCTTATTGCTTA+TGG | 0.285315 | 6_2:+16148519 | Msa0910990:three_prime_UTR |
| GTGATGCGTCAATAATTAAA+TGG | 0.297952 | 6_2:+16148419 | Msa0910990:exon |
| AATTTAATGTTCTCACCATT+TGG | 0.301117 | 6_2:+16148714 | Msa0910990:three_prime_UTR |
| GGAATTCAGGTAATTGAGTT+TGG | 0.301722 | 6_2:-16144453 | None:intergenic |
| TATTGCTTATGGCTTGCGAC+TGG | 0.317936 | 6_2:+16148530 | Msa0910990:three_prime_UTR |
| GAAGTCGTTCCAGTCTCTTT+TGG | 0.333344 | 6_2:-16145042 | None:intergenic |
| GTCAATAATTAAATGGCAAC+TGG | 0.334356 | 6_2:+16148426 | Msa0910990:three_prime_UTR |
| ATTTAATGTTCTCACCATTT+GGG | 0.340283 | 6_2:+16148715 | Msa0910990:three_prime_UTR |
| TCTGATAGAGCAAGGAATTC+AGG | 0.352555 | 6_2:-16144466 | None:intergenic |
| CACCATTTGGGTTCTTAGGT+TGG | 0.364969 | 6_2:+16148727 | Msa0910990:three_prime_UTR |
| AATATACCTTCACTCAAATC+TGG | 0.367127 | 6_2:-16145064 | None:intergenic |
| GTCACGTTCTCTGTTTCATT+TGG | 0.368600 | 6_2:-16144367 | None:intergenic |
| CTTTCTCTCTTCACTAGAAT+AGG | 0.378897 | 6_2:-16144326 | None:intergenic |
| AGAGAGAAAGAGAAAGAATA+TGG | 0.380703 | 6_2:+16144339 | Msa0910990:exon |
| GGGAGTGTCGCAAGATGATC+AGG | 0.382472 | 6_2:-16144490 | None:intergenic |
| GTTCAGCGTCCTTGTTGCTT+TGG | 0.391508 | 6_2:+16148377 | Msa0910990:CDS |
| ATTGCTTATGGCTTGCGACT+GGG | 0.406029 | 6_2:+16148531 | Msa0910990:three_prime_UTR |
| CAAAAGTCATTATCTAACTT+TGG | 0.413615 | 6_2:-16148625 | None:intergenic |
| AGAGAGAATGAGCACGTTGA+AGG | 0.421510 | 6_2:-16144516 | None:intergenic |
| TCGAATTGTTCTTCGGAAGA+TGG | 0.432800 | 6_2:-16146328 | None:intergenic |
| TACAAACAGCAGCTCATAGC+TGG | 0.435981 | 6_2:-16148494 | None:intergenic |
| TCAACTACGTATATATTGTA+TGG | 0.445908 | 6_2:+16148600 | Msa0910990:three_prime_UTR |
| AGCAGAACAGTGGCAAGATA+TGG | 0.460848 | 6_2:+16146258 | Msa0910990:intron |
| AATTTGATCGAATTGTTCTT+CGG | 0.466862 | 6_2:-16146335 | None:intergenic |
| AAGTGTGTGCCAAAAGAGAC+TGG | 0.467228 | 6_2:+16145033 | Msa0910990:CDS |
| TACAATATATACGTAGTTGA+AGG | 0.499424 | 6_2:-16148597 | None:intergenic |
| ATTCGATCAAATTGATTCCA+AGG | 0.503194 | 6_2:+16146345 | Msa0910990:CDS |
| TCAGCGTCCTTGTTGCTTTG+GGG | 0.510939 | 6_2:+16148379 | Msa0910990:CDS |
| GAATGAGCACGTTGAAGGAG+TGG | 0.521754 | 6_2:-16144511 | None:intergenic |
| GGCCAACCTAAGAACCCAAA+TGG | 0.527569 | 6_2:-16148729 | None:intergenic |
| TGCAGTATATGTGAACTACA+TGG | 0.528259 | 6_2:+16148336 | Msa0910990:intron |
| GGTAGAAGTGAGTTTGGCGA+GGG | 0.533143 | 6_2:-16144542 | None:intergenic |
| TTGCTTATGGCTTGCGACTG+GGG | 0.534371 | 6_2:+16148532 | Msa0910990:three_prime_UTR |
| AGGAGCAGACTGGTCAAAAG+AGG | 0.536792 | 6_2:+16146299 | Msa0910990:CDS |
| CATGAAACTCAAACGCAGAC+AGG | 0.542569 | 6_2:-16148686 | None:intergenic |
| AATGAGCACGTTGAAGGAGT+GGG | 0.547922 | 6_2:-16144510 | None:intergenic |
| GGGTAGAAGTGAGTTTGGCG+AGG | 0.549628 | 6_2:-16144543 | None:intergenic |
| TGGGGCGACTCATCAAAGCT+TGG | 0.551107 | 6_2:+16148397 | Msa0910990:CDS |
| CGACTTCCAGATTTGAGTGA+AGG | 0.560270 | 6_2:+16145058 | Msa0910990:CDS |
| AGAACAGTGGCAAGATATGG+TGG | 0.633543 | 6_2:+16146261 | Msa0910990:intron |
| GGTTATTTCAAGCAGAACAG+TGG | 0.634126 | 6_2:+16146248 | Msa0910990:intron |
| GATCAGGGTCTGATAGAGCA+AGG | 0.637548 | 6_2:-16144474 | None:intergenic |
| TCAATAATTAAATGGCAACT+GGG | 0.658227 | 6_2:+16148427 | Msa0910990:three_prime_UTR |
| GGAGTGTCGCAAGATGATCA+GGG | 0.666656 | 6_2:-16144489 | None:intergenic |
| TGAGTCGCCCCAAAGCAACA+AGG | 0.677678 | 6_2:-16148386 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TGTTTTTTTTTTTTTTTTTC+TGG | + | chr6_2:16144684-16144703 | Msa0910990:intron | 10.0% |
| !!! | AATAAAGTTACAATTTTTGA+AGG | - | chr6_2:16144610-16144629 | None:intergenic | 15.0% |
| !!! | CTATCTTAGTTTTTTTTTTA+GGG | - | chr6_2:16145984-16146003 | None:intergenic | 15.0% |
| !! | TAATAAATATATCTCAAAGA+TGG | - | chr6_2:16146782-16146801 | None:intergenic | 15.0% |
| !!! | TTTTGAAGGAAAACATTAAT+GGG | - | chr6_2:16144596-16144615 | None:intergenic | 20.0% |
| !!! | TTTTTGAAGGAAAACATTAA+TGG | - | chr6_2:16144597-16144616 | None:intergenic | 20.0% |
| !! | ATGCAACAAAATTAAAAACA+TGG | - | chr6_2:16144798-16144817 | None:intergenic | 20.0% |
| !! | TGTTGCATACAAATAAAAAA+GGG | + | chr6_2:16145739-16145758 | Msa0910990:intron | 20.0% |
| !!! | GCTATCTTAGTTTTTTTTTT+AGG | - | chr6_2:16145985-16146004 | None:intergenic | 20.0% |
| !! | ATGTTAAGAATTTGATTGAA+TGG | + | chr6_2:16146133-16146152 | Msa0910990:intron | 20.0% |
| !! | TGTTAAGAATTTGATTGAAT+GGG | + | chr6_2:16146134-16146153 | Msa0910990:intron | 20.0% |
| !! | CATGTGTTTGAAAAAAAAAA+TGG | + | chr6_2:16146227-16146246 | Msa0910990:intron | 20.0% |
| !! | CTACCAAAATACATAAAATA+TGG | - | chr6_2:16146559-16146578 | None:intergenic | 20.0% |
| !! | TTATGATCTCTATCTAATTT+AGG | + | chr6_2:16146589-16146608 | Msa0910990:intron | 20.0% |
| !! | TATGATCTCTATCTAATTTA+GGG | + | chr6_2:16146590-16146609 | Msa0910990:intron | 20.0% |
| !! | ACATAATTAGTTAATTCGTT+TGG | + | chr6_2:16147091-16147110 | Msa0910990:intron | 20.0% |
| !!! | AAAGGTAAAATTTGAGTTAT+TGG | + | chr6_2:16147290-16147309 | Msa0910990:intron | 20.0% |
| !! | ATAAATTTCCATTGTAGTTA+TGG | + | chr6_2:16147371-16147390 | Msa0910990:intron | 20.0% |
| !!! | AAGTATAGTTATTTCAGTTA+TGG | + | chr6_2:16147724-16147743 | Msa0910990:intron | 20.0% |
| !! | GTAAACAAAGCAATTATATA+TGG | - | chr6_2:16148250-16148269 | None:intergenic | 20.0% |
| !!! | TATATAATTGCTTTGTTTAC+TGG | + | chr6_2:16148250-16148269 | Msa0910990:intron | 20.0% |
| !!! | CCTATAAATATTCTAGATTT+TGG | - | chr6_2:16148282-16148301 | None:intergenic | 20.0% |
| !!! | CCAAAATCTAGAATATTTAT+AGG | + | chr6_2:16148279-16148298 | Msa0910990:intron | 20.0% |
| ! | GAAATACGAACATTCAAAAA+GGG | - | chr6_2:16144566-16144585 | None:intergenic | 25.0% |
| ! | TGAAATACGAACATTCAAAA+AGG | - | chr6_2:16144567-16144586 | None:intergenic | 25.0% |
| ! | ACAACAACAAAAACGAAAAT+GGG | - | chr6_2:16144658-16144677 | None:intergenic | 25.0% |
| ! | AACAACAACAAAAACGAAAA+TGG | - | chr6_2:16144659-16144678 | None:intergenic | 25.0% |
| ! | TGAATGTAATCATATGTGTA+CGG | - | chr6_2:16144874-16144893 | None:intergenic | 25.0% |
| !!! | TTGTTCAAGTTTTGACATTT+GGG | + | chr6_2:16144955-16144974 | Msa0910990:intron | 25.0% |
| !! | CAAACTATTTTCATATAAGC+TGG | + | chr6_2:16145160-16145179 | Msa0910990:intron | 25.0% |
| !! | TTATCATAAGTCCTTTTCAT+TGG | + | chr6_2:16145367-16145386 | Msa0910990:intron | 25.0% |
| ! | ACACTTAGAATGAAATATCA+TGG | - | chr6_2:16145418-16145437 | None:intergenic | 25.0% |
| ! | GTGTTGCATACAAATAAAAA+AGG | + | chr6_2:16145738-16145757 | Msa0910990:intron | 25.0% |
| ! | CATACAAATAAAAAAGGGAA+TGG | + | chr6_2:16145744-16145763 | Msa0910990:intron | 25.0% |
| !!! | TTTTTTTTTTAGGGCAATAG+CGG | - | chr6_2:16145975-16145994 | None:intergenic | 25.0% |
| ! | AATTTGATCGAATTGTTCTT+CGG | - | chr6_2:16146338-16146357 | None:intergenic | 25.0% |
| ! | AATAACAGAAAACAGAGTTT+GGG | - | chr6_2:16146505-16146524 | None:intergenic | 25.0% |
| ! | CCAAAATACATAAAATATGG+AGG | - | chr6_2:16146556-16146575 | None:intergenic | 25.0% |
| !! | CCTCCATATTTTATGTATTT+TGG | + | chr6_2:16146553-16146572 | Msa0910990:intron | 25.0% |
| !!! | ATTGAGTTTTAGCAAAAGTT+CGG | + | chr6_2:16146812-16146831 | Msa0910990:intron | 25.0% |
| ! | TAATGAGAAAATGAAAGCTA+AGG | - | chr6_2:16147150-16147169 | None:intergenic | 25.0% |
| !!! | TTTTGTTTAAAGCAGTTTAG+TGG | - | chr6_2:16147182-16147201 | None:intergenic | 25.0% |
| !! | ATTGTTGGTTGAATTATTCA+AGG | + | chr6_2:16147265-16147284 | Msa0910990:intron | 25.0% |
| !! | TTGTTGGTTGAATTATTCAA+GGG | + | chr6_2:16147266-16147285 | Msa0910990:intron | 25.0% |
| ! | AAATGTAATGATAAAGCTTG+TGG | + | chr6_2:16147559-16147578 | Msa0910990:intron | 25.0% |
| ! | AATGTAATGATAAAGCTTGT+GGG | + | chr6_2:16147560-16147579 | Msa0910990:intron | 25.0% |
| ! | CTACTCATTATTAATTGAGT+TGG | - | chr6_2:16147652-16147671 | None:intergenic | 25.0% |
| ! | CAACTCAATTAATAATGAGT+AGG | + | chr6_2:16147650-16147669 | Msa0910990:intron | 25.0% |
| !! | ATAGTTATTTCAGTTATGGA+CGG | + | chr6_2:16147728-16147747 | Msa0910990:intron | 25.0% |
| ! | TCAATAATTAAATGGCAACT+GGG | + | chr6_2:16148427-16148446 | Msa0910990:three_prime_UTR | 25.0% |
| ! | TACAATATATACGTAGTTGA+AGG | - | chr6_2:16148600-16148619 | None:intergenic | 25.0% |
| ! | TCAACTACGTATATATTGTA+TGG | + | chr6_2:16148600-16148619 | Msa0910990:three_prime_UTR | 25.0% |
| ! | CAAAAGTCATTATCTAACTT+TGG | - | chr6_2:16148628-16148647 | None:intergenic | 25.0% |
| ! | AATTTAATGTTCTCACCATT+TGG | + | chr6_2:16148714-16148733 | Msa0910990:three_prime_UTR | 25.0% |
| ! | ATTTAATGTTCTCACCATTT+GGG | + | chr6_2:16148715-16148734 | Msa0910990:three_prime_UTR | 25.0% |
| AGAGAGAAAGAGAAAGAATA+TGG | + | chr6_2:16144339-16144358 | Msa0910990:exon | 30.0% | |
| !! | GATTCTATTGTTGTTGATTC+TGG | - | chr6_2:16144400-16144419 | None:intergenic | 30.0% |
| ! | ATTTAAAGGCATGGTCATTT+GGG | - | chr6_2:16144740-16144759 | None:intergenic | 30.0% |
| !! | GTTGTTCAAGTTTTGACATT+TGG | + | chr6_2:16144954-16144973 | Msa0910990:intron | 30.0% |
| !! | TGTTCAAGTTTTGACATTTG+GGG | + | chr6_2:16144956-16144975 | Msa0910990:intron | 30.0% |
| ! | GATTTTGTGTTCAACAGAAT+AGG | + | chr6_2:16145008-16145027 | Msa0910990:intron | 30.0% |
| AATATACCTTCACTCAAATC+TGG | - | chr6_2:16145067-16145086 | None:intergenic | 30.0% | |
| GTTACTTATCCAAACAAACA+GGG | - | chr6_2:16145112-16145131 | None:intergenic | 30.0% | |
| AGTTACTTATCCAAACAAAC+AGG | - | chr6_2:16145113-16145132 | None:intergenic | 30.0% | |
| AAAAGGACTTATGATAAGCA+TGG | - | chr6_2:16145364-16145383 | None:intergenic | 30.0% | |
| TAATAGCTCAACCAATGAAA+AGG | - | chr6_2:16145381-16145400 | None:intergenic | 30.0% | |
| CATAAAAGAAAGACAGAACT+TGG | - | chr6_2:16145556-16145575 | None:intergenic | 30.0% | |
| ATAATATCAGTAGTAAGCTG+TGG | + | chr6_2:16145607-16145626 | Msa0910990:intron | 30.0% | |
| TGAGTCAACGGTATATAAAA+AGG | + | chr6_2:16145714-16145733 | Msa0910990:intron | 30.0% | |
| ACAAATAAAAAAGGGAATGG+AGG | + | chr6_2:16145747-16145766 | Msa0910990:intron | 30.0% | |
| !! | AGATTTTGAGGGAAAAAACT+GGG | - | chr6_2:16146023-16146042 | None:intergenic | 30.0% |
| ! | TATAGCATAGCAGATTTTGA+GGG | - | chr6_2:16146034-16146053 | None:intergenic | 30.0% |
| AAGAATTTGATTGAATGGGT+TGG | + | chr6_2:16146138-16146157 | Msa0910990:intron | 30.0% | |
| !! | CTTTTTGTTTAACACTCTGT+TGG | + | chr6_2:16146172-16146191 | Msa0910990:intron | 30.0% |
| TCAAAATGTAAGACACGTAT+GGG | - | chr6_2:16146203-16146222 | None:intergenic | 30.0% | |
| TTCAAAATGTAAGACACGTA+TGG | - | chr6_2:16146204-16146223 | None:intergenic | 30.0% | |
| ! | ATTCGATCAAATTGATTCCA+AGG | + | chr6_2:16146345-16146364 | Msa0910990:CDS | 30.0% |
| AAACAGAGTTTGGGTAATAA+GGG | - | chr6_2:16146496-16146515 | None:intergenic | 30.0% | |
| AAAACAGAGTTTGGGTAATA+AGG | - | chr6_2:16146497-16146516 | None:intergenic | 30.0% | |
| CAATAACAGAAAACAGAGTT+TGG | - | chr6_2:16146506-16146525 | None:intergenic | 30.0% | |
| GCAACGAAGTTAAAAATCAT+AGG | + | chr6_2:16146719-16146738 | Msa0910990:intron | 30.0% | |
| GGTTATATGAGATTTGAATG+TGG | + | chr6_2:16146740-16146759 | Msa0910990:intron | 30.0% | |
| TATATGAGATTTGAATGTGG+AGG | + | chr6_2:16146743-16146762 | Msa0910990:intron | 30.0% | |
| TAATACGATTATACGACTGA+AGG | + | chr6_2:16146892-16146911 | Msa0910990:intron | 30.0% | |
| AATACGATTATACGACTGAA+GGG | + | chr6_2:16146893-16146912 | Msa0910990:intron | 30.0% | |
| !! | TAGCGAGTTTTGATGTTTAT+CGG | + | chr6_2:16146958-16146977 | Msa0910990:intron | 30.0% |
| TTCATTTAGCAAGTGATCTT+AGG | + | chr6_2:16147124-16147143 | Msa0910990:intron | 30.0% | |
| GTTGAATTATTCAAGGGAAA+AGG | + | chr6_2:16147272-16147291 | Msa0910990:intron | 30.0% | |
| TACTAGTTAGATTTCCTGAA+TGG | + | chr6_2:16147318-16147337 | Msa0910990:intron | 30.0% | |
| TCAAGATCCTTACACTAATA+AGG | - | chr6_2:16147352-16147371 | None:intergenic | 30.0% | |
| GTGTATAAGTAGAACAAAAG+AGG | + | chr6_2:16147458-16147477 | Msa0910990:intron | 30.0% | |
| ! | AACAAAAGAGGCATGAAATA+AGG | + | chr6_2:16147470-16147489 | Msa0910990:intron | 30.0% |
| GTGTTTGATTATTTGATGAG+TGG | + | chr6_2:16147523-16147542 | Msa0910990:intron | 30.0% | |
| ATTATTTGATGAGTGGTTCT+GGG | + | chr6_2:16147530-16147549 | Msa0910990:intron | 30.0% | |
| ! | TGAACTCTTAATTTAGCCTT+TGG | + | chr6_2:16147679-16147698 | Msa0910990:intron | 30.0% |
| ! | AATTTAGCCTTTGGTTATAG+AGG | + | chr6_2:16147688-16147707 | Msa0910990:intron | 30.0% |
| AATTGATCCTCTATAACCAA+AGG | - | chr6_2:16147698-16147717 | None:intergenic | 30.0% | |
| AATCTAGAAGACAAAGGATA+TGG | + | chr6_2:16148035-16148054 | Msa0910990:intron | 30.0% | |
| ATCTTTAGATCTAAACCTGA+AGG | + | chr6_2:16148058-16148077 | Msa0910990:intron | 30.0% | |
| !!! | CTTTTAAAACAAAAGCCTTC+AGG | - | chr6_2:16148076-16148095 | None:intergenic | 30.0% |
| !!! | GCTTTTGTTTTAAAAGCCAA+AGG | + | chr6_2:16148080-16148099 | Msa0910990:intron | 30.0% |
| TTAGCCTGAAAATCATACTT+GGG | + | chr6_2:16148166-16148185 | Msa0910990:intron | 30.0% | |
| GTGATGCGTCAATAATTAAA+TGG | + | chr6_2:16148419-16148438 | Msa0910990:exon | 30.0% | |
| GTCAATAATTAAATGGCAAC+TGG | + | chr6_2:16148426-16148445 | Msa0910990:three_prime_UTR | 30.0% | |
| AGATGAATGCTTATTGCTTA+TGG | + | chr6_2:16148519-16148538 | Msa0910990:three_prime_UTR | 30.0% | |
| !! | GGTTAACTATGCTTTTTAAC+TGG | + | chr6_2:16148553-16148572 | Msa0910990:three_prime_UTR | 30.0% |
| !!! | GAATAGGTTTTGAGTCAACA+CGG | - | chr6_2:16144313-16144332 | None:intergenic | 35.0% |
| CTTTCTCTCTTCACTAGAAT+AGG | - | chr6_2:16144329-16144348 | None:intergenic | 35.0% | |
| GGAATTCAGGTAATTGAGTT+TGG | - | chr6_2:16144456-16144475 | None:intergenic | 35.0% | |
| AAAAAGGGTAGAAGTGAGTT+TGG | - | chr6_2:16144551-16144570 | None:intergenic | 35.0% | |
| ! | GATTTAAAGGCATGGTCATT+TGG | - | chr6_2:16144741-16144760 | None:intergenic | 35.0% |
| GCTTACAAGCTCAGATTTAA+AGG | - | chr6_2:16144754-16144773 | None:intergenic | 35.0% | |
| AATCTGAGCTTGTAAGCTAA+AGG | + | chr6_2:16144757-16144776 | Msa0910990:intron | 35.0% | |
| ATCTGAGCTTGTAAGCTAAA+GGG | + | chr6_2:16144758-16144777 | Msa0910990:intron | 35.0% | |
| ! | GCTAAAGGGTTCTTTTCTTT+TGG | + | chr6_2:16144772-16144791 | Msa0910990:intron | 35.0% |
| TTTCTTAGACCCTGTTTGTT+TGG | + | chr6_2:16145100-16145119 | Msa0910990:intron | 35.0% | |
| AATAAGCGGAAACCAAGTTA+TGG | + | chr6_2:16145222-16145241 | Msa0910990:intron | 35.0% | |
| CTTATGACACATCCATAACT+TGG | - | chr6_2:16145237-16145256 | None:intergenic | 35.0% | |
| !!! | TTTTAGAGTCCTACAGATGT+AGG | - | chr6_2:16145532-16145551 | None:intergenic | 35.0% |
| TAGTAAGCTGTGGTAAATAG+TGG | + | chr6_2:16145617-16145636 | Msa0910990:intron | 35.0% | |
| !! | CTATCTGCTATTTCACATAG+CGG | - | chr6_2:16145655-16145674 | None:intergenic | 35.0% |
| ATAAATGGTACACATAGTGC+AGG | + | chr6_2:16145866-16145885 | Msa0910990:intron | 35.0% | |
| CAGTAGCAGGAAAAAAAATC+GGG | - | chr6_2:16145918-16145937 | None:intergenic | 35.0% | |
| GCAGTAGCAGGAAAAAAAAT+CGG | - | chr6_2:16145919-16145938 | None:intergenic | 35.0% | |
| !! | CAGATTTTGAGGGAAAAAAC+TGG | - | chr6_2:16146024-16146043 | None:intergenic | 35.0% |
| ! | GTATAGCATAGCAGATTTTG+AGG | - | chr6_2:16146035-16146054 | None:intergenic | 35.0% |
| CAAATAACAGTGTGCTATAG+CGG | - | chr6_2:16146057-16146076 | None:intergenic | 35.0% | |
| ! | CACACTGTTATTTGACAACA+CGG | + | chr6_2:16146063-16146082 | Msa0910990:intron | 35.0% |
| ! | ACACTGTTATTTGACAACAC+GGG | + | chr6_2:16146064-16146083 | Msa0910990:intron | 35.0% |
| CAAAATGTAAGACACGTATG+GGG | - | chr6_2:16146202-16146221 | None:intergenic | 35.0% | |
| TTTATTCTCACAAAACCCTC+AGG | - | chr6_2:16146675-16146694 | None:intergenic | 35.0% | |
| !! | AGTTTTAGCAAAAGTTCGGA+AGG | + | chr6_2:16146816-16146835 | Msa0910990:intron | 35.0% |
| !! | TTCGGAAGGTATTTACCATA+GGG | + | chr6_2:16146830-16146849 | Msa0910990:intron | 35.0% |
| !! | AGCGAGTTTTGATGTTTATC+GGG | + | chr6_2:16146959-16146978 | Msa0910990:intron | 35.0% |
| ATCAACAGTACACTAACAGA+AGG | - | chr6_2:16147013-16147032 | None:intergenic | 35.0% | |
| AGGTTCACCTTATTAGTGTA+AGG | + | chr6_2:16147342-16147361 | Msa0910990:intron | 35.0% | |
| TGTGCATTCCATAACTACAA+TGG | - | chr6_2:16147382-16147401 | None:intergenic | 35.0% | |
| AATGCACACCTAATGTCTAT+GGG | + | chr6_2:16147394-16147413 | Msa0910990:intron | 35.0% | |
| AGGCATGAAATAAGGCAATA+AGG | + | chr6_2:16147478-16147497 | Msa0910990:intron | 35.0% | |
| AAATAAGGCAATAAGGTCAC+TGG | + | chr6_2:16147485-16147504 | Msa0910990:intron | 35.0% | |
| GATTATTTGATGAGTGGTTC+TGG | + | chr6_2:16147529-16147548 | Msa0910990:intron | 35.0% | |
| AATGTAACGATTGCCATTAC+GGG | - | chr6_2:16147837-16147856 | None:intergenic | 35.0% | |
| GAATGTAACGATTGCCATTA+CGG | - | chr6_2:16147838-16147857 | None:intergenic | 35.0% | |
| GGCAATCGTTACATTCTTAA+CGG | + | chr6_2:16147842-16147861 | Msa0910990:intron | 35.0% | |
| TGTAAATCGTGAAAATGACG+TGG | + | chr6_2:16147920-16147939 | Msa0910990:intron | 35.0% | |
| ! | GAACCATTAGGTCATCTTTT+GGG | - | chr6_2:16147993-16148012 | None:intergenic | 35.0% |
| ! | AGAACCATTAGGTCATCTTT+TGG | - | chr6_2:16147994-16148013 | None:intergenic | 35.0% |
| !! | CAAGTATGATTTTCAGGCTA+AGG | - | chr6_2:16148167-16148186 | None:intergenic | 35.0% |
| CTTAGCCTGAAAATCATACT+TGG | + | chr6_2:16148165-16148184 | Msa0910990:intron | 35.0% | |
| TAGCCTGAAAATCATACTTG+GGG | + | chr6_2:16148167-16148186 | Msa0910990:intron | 35.0% | |
| TGCAGTATATGTGAACTACA+TGG | + | chr6_2:16148336-16148355 | Msa0910990:intron | 35.0% | |
| !! | GTTTTGAGTCAACACGGATT+TGG | - | chr6_2:16144307-16144326 | None:intergenic | 40.0% |
| GTCACGTTCTCTGTTTCATT+TGG | - | chr6_2:16144370-16144389 | None:intergenic | 40.0% | |
| TCTGATAGAGCAAGGAATTC+AGG | - | chr6_2:16144469-16144488 | None:intergenic | 40.0% | |
| ATAGTGAAGTTGAAGTGCAG+AGG | + | chr6_2:16144708-16144727 | Msa0910990:intron | 40.0% | |
| TAGTGAAGTTGAAGTGCAGA+GGG | + | chr6_2:16144709-16144728 | Msa0910990:intron | 40.0% | |
| CAAGCTCAGATTTAAAGGCA+TGG | - | chr6_2:16144749-16144768 | None:intergenic | 40.0% | |
| GTCTGATCGAATGACATGTT+CGG | + | chr6_2:16144828-16144847 | Msa0910990:intron | 40.0% | |
| !! | AGATGTTCTGAAAGCTATCC+TGG | + | chr6_2:16145184-16145203 | Msa0910990:intron | 40.0% |
| GCAGAGCTTATGGAAATAAG+CGG | + | chr6_2:16145208-16145227 | Msa0910990:intron | 40.0% | |
| ! | CACGGGTCTATTTTATGGAT+TGG | - | chr6_2:16145330-16145349 | None:intergenic | 40.0% |
| !! | AAGAGCACGGGTCTATTTTA+TGG | - | chr6_2:16145335-16145354 | None:intergenic | 40.0% |
| AAGTCCTATCCTACATCTGT+AGG | + | chr6_2:16145520-16145539 | Msa0910990:intron | 40.0% | |
| !! | GTTTCTGGTAGAGGATATAG+TGG | - | chr6_2:16145941-16145960 | None:intergenic | 40.0% |
| ! | GGTTATTTCAAGCAGAACAG+TGG | + | chr6_2:16146248-16146267 | Msa0910990:intron | 40.0% |
| !! | GGTGGAGCAAAAGTTTTATG+AGG | + | chr6_2:16146279-16146298 | Msa0910990:CDS | 40.0% |
| !! | AAGTTTTATGAGGAGCAGAC+TGG | + | chr6_2:16146289-16146308 | Msa0910990:CDS | 40.0% |
| TCGAATTGTTCTTCGGAAGA+TGG | - | chr6_2:16146331-16146350 | None:intergenic | 40.0% | |
| ! | AATTGATTCCAAGGAGTACG+TGG | + | chr6_2:16146354-16146373 | Msa0910990:intron | 40.0% |
| ! | TAGTAGTGGAAGCAGTATCA+AGG | + | chr6_2:16146411-16146430 | Msa0910990:intron | 40.0% |
| ! | TGATGACGATGATGATGATG+AGG | + | chr6_2:16146462-16146481 | Msa0910990:intron | 40.0% |
| !! | GTTCGGAAGGTATTTACCAT+AGG | + | chr6_2:16146829-16146848 | Msa0910990:intron | 40.0% |
| GACTCTTCACATATAACGCA+AGG | - | chr6_2:16146928-16146947 | None:intergenic | 40.0% | |
| CAAAACTCGCTAAAAGAGTG+AGG | - | chr6_2:16146950-16146969 | None:intergenic | 40.0% | |
| CAGTACACTAACAGAAGGTA+GGG | - | chr6_2:16147008-16147027 | None:intergenic | 40.0% | |
| ACAGTACACTAACAGAAGGT+AGG | - | chr6_2:16147009-16147028 | None:intergenic | 40.0% | |
| ! | GTTGATTGTACTGATGAGTG+CGG | + | chr6_2:16147027-16147046 | Msa0910990:intron | 40.0% |
| CCAACAATCATGAAAGAGAC+TGG | - | chr6_2:16147253-16147272 | None:intergenic | 40.0% | |
| CCAGTCTCTTTCATGATTGT+TGG | + | chr6_2:16147250-16147269 | Msa0910990:intron | 40.0% | |
| AGTTAGATTTCCTGAATGGC+AGG | + | chr6_2:16147322-16147341 | Msa0910990:intron | 40.0% | |
| GAATGCACACCTAATGTCTA+TGG | + | chr6_2:16147393-16147412 | Msa0910990:intron | 40.0% | |
| GGCCTTAAGCTTGAATAACT+GGG | + | chr6_2:16147415-16147434 | Msa0910990:intron | 40.0% | |
| CACCCAGTTATTCAAGCTTA+AGG | - | chr6_2:16147420-16147439 | None:intergenic | 40.0% | |
| !! | AATAAGGTCACTGGTTCTAG+TGG | + | chr6_2:16147494-16147513 | Msa0910990:intron | 40.0% |
| GCTCATTAGTACAGTGATGA+TGG | - | chr6_2:16147611-16147630 | None:intergenic | 40.0% | |
| ATGTAACGATTGCCATTACG+GGG | - | chr6_2:16147836-16147855 | None:intergenic | 40.0% | |
| GTTACATTCTTAACGGCCTT+GGG | + | chr6_2:16147849-16147868 | Msa0910990:intron | 40.0% | |
| !! | ATGTGGAATAGAGGTGTTAG+GGG | - | chr6_2:16147888-16147907 | None:intergenic | 40.0% |
| !! | CATGTGGAATAGAGGTGTTA+GGG | - | chr6_2:16147889-16147908 | None:intergenic | 40.0% |
| TCTATTCCACATGCTCTGTA+CGG | + | chr6_2:16147896-16147915 | Msa0910990:intron | 40.0% | |
| GCTGGTTAATCATGAGATGA+AGG | + | chr6_2:16147955-16147974 | Msa0910990:intron | 40.0% | |
| GATCCCAAAAGATGACCTAA+TGG | + | chr6_2:16147987-16148006 | Msa0910990:intron | 40.0% | |
| TTCTGCAATGCAGAACCATT+AGG | - | chr6_2:16148005-16148024 | None:intergenic | 40.0% | |
| GTTCTGCATTGCAGAAAGAA+GGG | + | chr6_2:16148009-16148028 | Msa0910990:intron | 40.0% | |
| TTCTGCATTGCAGAAAGAAG+GGG | + | chr6_2:16148010-16148029 | Msa0910990:intron | 40.0% | |
| GGGGAAAATCTAGAAGACAA+AGG | + | chr6_2:16148029-16148048 | Msa0910990:intron | 40.0% | |
| CAGGATAGAGATATAATCCC+AGG | - | chr6_2:16148193-16148212 | None:intergenic | 40.0% | |
| CTGGGATTATATCTCTATCC+TGG | + | chr6_2:16148191-16148210 | Msa0910990:intron | 40.0% | |
| ! | TTCTCACCATTTGGGTTCTT+AGG | + | chr6_2:16148723-16148742 | Msa0910990:three_prime_UTR | 40.0% |
| AATGAGCACGTTGAAGGAGT+GGG | - | chr6_2:16144513-16144532 | None:intergenic | 45.0% | |
| AGAGAGAATGAGCACGTTGA+AGG | - | chr6_2:16144519-16144538 | None:intergenic | 45.0% | |
| TGTCATTCGATCAGACGTGT+CGG | - | chr6_2:16144824-16144843 | None:intergenic | 45.0% | |
| ! | TTGTGTTGACGTGTCAGTGT+CGG | + | chr6_2:16144906-16144925 | Msa0910990:intron | 45.0% |
| AAGTGTGTGCCAAAAGAGAC+TGG | + | chr6_2:16145033-16145052 | Msa0910990:CDS | 45.0% | |
| ! | GAAGTCGTTCCAGTCTCTTT+TGG | - | chr6_2:16145045-16145064 | None:intergenic | 45.0% |
| CGACTTCCAGATTTGAGTGA+AGG | + | chr6_2:16145058-16145077 | Msa0910990:CDS | 45.0% | |
| ATTTCCATAAGCTCTGCACC+AGG | - | chr6_2:16145205-16145224 | None:intergenic | 45.0% | |
| ACATTCCTCGTCTTTACTGC+TGG | + | chr6_2:16145456-16145475 | Msa0910990:intron | 45.0% | |
| CAAAACCAGCAGTAAAGACG+AGG | - | chr6_2:16145464-16145483 | None:intergenic | 45.0% | |
| GAGTCCTACAGATGTAGGAT+AGG | - | chr6_2:16145527-16145546 | None:intergenic | 45.0% | |
| CAAATAGAGCAAGCCGCATA+GGG | + | chr6_2:16145684-16145703 | Msa0910990:intron | 45.0% | |
| AAATAGAGCAAGCCGCATAG+GGG | + | chr6_2:16145685-16145704 | Msa0910990:intron | 45.0% | |
| TAGGGGTTGGAATGAGTCAA+CGG | + | chr6_2:16145702-16145721 | Msa0910990:intron | 45.0% | |
| TCTACCAGAAACTCGAACAG+CGG | + | chr6_2:16145949-16145968 | Msa0910990:intron | 45.0% | |
| GGTTTCAGTTTACATTGCCG+AGG | + | chr6_2:16146085-16146104 | Msa0910990:intron | 45.0% | |
| CAAAACGAAGACAACAGCCT+CGG | - | chr6_2:16146105-16146124 | None:intergenic | 45.0% | |
| AGCAGAACAGTGGCAAGATA+TGG | + | chr6_2:16146258-16146277 | Msa0910990:intron | 45.0% | |
| AGAACAGTGGCAAGATATGG+TGG | + | chr6_2:16146261-16146280 | Msa0910990:intron | 45.0% | |
| CAATTTCTCCACGTACTCCT+TGG | - | chr6_2:16146365-16146384 | None:intergenic | 45.0% | |
| AGTACGTGGAGAAATTGCCA+GGG | + | chr6_2:16146368-16146387 | Msa0910990:intron | 45.0% | |
| ! | AGTTCTGATATGTGAGCCTG+AGG | + | chr6_2:16146656-16146675 | Msa0910990:intron | 45.0% |
| GTTCTGATATGTGAGCCTGA+GGG | + | chr6_2:16146657-16146676 | Msa0910990:intron | 45.0% | |
| ! | CATTCTAGTTGCAAGCCCTA+TGG | - | chr6_2:16146848-16146867 | None:intergenic | 45.0% |
| ATAAGGTGAACCTGCCATTC+AGG | - | chr6_2:16147335-16147354 | None:intergenic | 45.0% | |
| GCTTAAGGCCCATAGACATT+AGG | - | chr6_2:16147405-16147424 | None:intergenic | 45.0% | |
| GGGCCTTAAGCTTGAATAAC+TGG | + | chr6_2:16147414-16147433 | Msa0910990:intron | 45.0% | |
| !! | ATTTGATGAGTGGTTCTGGG+AGG | + | chr6_2:16147533-16147552 | Msa0910990:intron | 45.0% |
| TTTCAGTTATGGACGGAGAG+TGG | + | chr6_2:16147735-16147754 | Msa0910990:intron | 45.0% | |
| ! | TGGACACTTGATGACCGTTT+AGG | + | chr6_2:16147780-16147799 | Msa0910990:intron | 45.0% |
| GATGACCGTTTAGGTCGTAA+AGG | + | chr6_2:16147789-16147808 | Msa0910990:intron | 45.0% | |
| !! | GTTGGCCTTTACGACCTAAA+CGG | - | chr6_2:16147797-16147816 | None:intergenic | 45.0% |
| CGTTACATTCTTAACGGCCT+TGG | + | chr6_2:16147848-16147867 | Msa0910990:intron | 45.0% | |
| !! | GCATGTGGAATAGAGGTGTT+AGG | - | chr6_2:16147890-16147909 | None:intergenic | 45.0% |
| GTACAGAGCATGTGGAATAG+AGG | - | chr6_2:16147897-16147916 | None:intergenic | 45.0% | |
| TTACATCCGTACAGAGCATG+TGG | - | chr6_2:16147905-16147924 | None:intergenic | 45.0% | |
| CTCATGATTAACCAGCGTGT+AGG | - | chr6_2:16147951-16147970 | None:intergenic | 45.0% | |
| GGTTCTGCATTGCAGAAAGA+AGG | + | chr6_2:16148008-16148027 | Msa0910990:intron | 45.0% | |
| ! | AGGCCCCAAGTATGATTTTC+AGG | - | chr6_2:16148173-16148192 | None:intergenic | 45.0% |
| TGAAAATCATACTTGGGGCC+TGG | + | chr6_2:16148172-16148191 | Msa0910990:intron | 45.0% | |
| GAAAATCATACTTGGGGCCT+GGG | + | chr6_2:16148173-16148192 | Msa0910990:intron | 45.0% | |
| GACTACACAAGTTCTGTTCC+AGG | - | chr6_2:16148212-16148231 | None:intergenic | 45.0% | |
| !! | TTCAGCGTCCTTGTTGCTTT+GGG | + | chr6_2:16148378-16148397 | Msa0910990:CDS | 45.0% |
| TACAAACAGCAGCTCATAGC+TGG | - | chr6_2:16148497-16148516 | None:intergenic | 45.0% | |
| ! | TATTGCTTATGGCTTGCGAC+TGG | + | chr6_2:16148530-16148549 | Msa0910990:three_prime_UTR | 45.0% |
| ! | ATTGCTTATGGCTTGCGACT+GGG | + | chr6_2:16148531-16148550 | Msa0910990:three_prime_UTR | 45.0% |
| CATGAAACTCAAACGCAGAC+AGG | - | chr6_2:16148689-16148708 | None:intergenic | 45.0% | |
| ! | CTGTCTGCGTTTGAGTTTCA+TGG | + | chr6_2:16148687-16148706 | Msa0910990:three_prime_UTR | 45.0% |
| ! | CACCATTTGGGTTCTTAGGT+TGG | + | chr6_2:16148727-16148746 | Msa0910990:three_prime_UTR | 45.0% |
| !!! | TTTTAAAAATTTGTTATAAA+TGG | + | chr6_2:16145851-16145870 | Msa0910990:intron | 5.0% |
| GATCAGGGTCTGATAGAGCA+AGG | - | chr6_2:16144477-16144496 | None:intergenic | 50.0% | |
| !! | GGAGTGTCGCAAGATGATCA+GGG | - | chr6_2:16144492-16144511 | None:intergenic | 50.0% |
| GAATGAGCACGTTGAAGGAG+TGG | - | chr6_2:16144514-16144533 | None:intergenic | 50.0% | |
| GGTAGAAGTGAGTTTGGCGA+GGG | - | chr6_2:16144545-16144564 | None:intergenic | 50.0% | |
| !! | ACATGTTCGGTGTCCGACAT+TGG | + | chr6_2:16144841-16144860 | Msa0910990:intron | 50.0% |
| CTATCCTGGTGCAGAGCTTA+TGG | + | chr6_2:16145198-16145217 | Msa0910990:intron | 50.0% | |
| AGCATGGTCGAGAAAGAGCA+CGG | - | chr6_2:16145348-16145367 | None:intergenic | 50.0% | |
| ! | ATGCGGCTTGCTCTATTTGC+AGG | - | chr6_2:16145683-16145702 | None:intergenic | 50.0% |
| GCAAATAGAGCAAGCCGCAT+AGG | + | chr6_2:16145683-16145702 | Msa0910990:intron | 50.0% | |
| GACTCATTCCAACCCCTATG+CGG | - | chr6_2:16145700-16145719 | None:intergenic | 50.0% | |
| GAGGATATAGTGGCAGTAGC+AGG | - | chr6_2:16145931-16145950 | None:intergenic | 50.0% | |
| !! | GCTGTTCGAGTTTCTGGTAG+AGG | - | chr6_2:16145950-16145969 | None:intergenic | 50.0% |
| ! | AGGAGCAGACTGGTCAAAAG+AGG | + | chr6_2:16146299-16146318 | Msa0910990:CDS | 50.0% |
| GAGTACGTGGAGAAATTGCC+AGG | + | chr6_2:16146367-16146386 | Msa0910990:intron | 50.0% | |
| GTACGTGGAGAAATTGCCAG+GGG | + | chr6_2:16146369-16146388 | Msa0910990:intron | 50.0% | |
| !! | GTTGTTGGTGGTGGTAGTAG+TGG | + | chr6_2:16146397-16146416 | Msa0910990:intron | 50.0% |
| ! | ACGACCTTTCAGGTCGAAGT+TGG | + | chr6_2:16147760-16147779 | Msa0910990:intron | 50.0% |
| GTGTCCAACTTCGACCTGAA+AGG | - | chr6_2:16147767-16147786 | None:intergenic | 50.0% | |
| GGATAGGAGTTGCAGTAGGT+TGG | - | chr6_2:16147815-16147834 | None:intergenic | 50.0% | |
| TGCAACTCCTATCCCCGTAA+TGG | + | chr6_2:16147821-16147840 | Msa0910990:intron | 50.0% | |
| ACGATTGCCATTACGGGGAT+AGG | - | chr6_2:16147831-16147850 | None:intergenic | 50.0% | |
| ! | GTTCAGCGTCCTTGTTGCTT+TGG | + | chr6_2:16148377-16148396 | Msa0910990:CDS | 50.0% |
| !! | TCAGCGTCCTTGTTGCTTTG+GGG | + | chr6_2:16148379-16148398 | Msa0910990:CDS | 50.0% |
| ! | TTGCTTATGGCTTGCGACTG+GGG | + | chr6_2:16148532-16148551 | Msa0910990:three_prime_UTR | 50.0% |
| !! | GGGAGTGTCGCAAGATGATC+AGG | - | chr6_2:16144493-16144512 | None:intergenic | 55.0% |
| GGGTAGAAGTGAGTTTGGCG+AGG | - | chr6_2:16144546-16144565 | None:intergenic | 55.0% | |
| !! | GTACGGTGTCGTGCCAATGT+CGG | - | chr6_2:16144857-16144876 | None:intergenic | 55.0% |
| ! | GCATGGTCGAGAAAGAGCAC+GGG | - | chr6_2:16145347-16145366 | None:intergenic | 55.0% |
| TTGCCAGGGGAGGATGTTGT+TGG | + | chr6_2:16146382-16146401 | Msa0910990:intron | 55.0% | |
| GAGAGTGGAGACGACCTTTC+AGG | + | chr6_2:16147750-16147769 | Msa0910990:intron | 55.0% | |
| ACGGGGATAGGAGTTGCAGT+AGG | - | chr6_2:16147819-16147838 | None:intergenic | 55.0% | |
| ACGTGGCTTATCCTACACGC+TGG | + | chr6_2:16147937-16147956 | Msa0910990:intron | 55.0% | |
| ACACGAGACGCGTTCTCCTT+TGG | - | chr6_2:16148099-16148118 | None:intergenic | 55.0% | |
| TGAGTCGCCCCAAAGCAACA+AGG | - | chr6_2:16148389-16148408 | None:intergenic | 55.0% | |
| TGGGGCGACTCATCAAAGCT+TGG | + | chr6_2:16148397-16148416 | Msa0910990:CDS | 55.0% | |
| AGAGCAAGCCGCATAGGGGT+TGG | + | chr6_2:16145689-16145708 | Msa0910990:intron | 60.0% | |
| CGTGGAGAAATTGCCAGGGG+AGG | + | chr6_2:16146372-16146391 | Msa0910990:intron | 60.0% | |
| CCACCAACAACATCCTCCCC+TGG | - | chr6_2:16146388-16146407 | None:intergenic | 60.0% | |
| CCAGGGGAGGATGTTGTTGG+TGG | + | chr6_2:16146385-16146404 | Msa0910990:intron | 60.0% | |
| ! | GGGGAGGATGTTGTTGGTGG+TGG | + | chr6_2:16146388-16146407 | Msa0910990:intron | 60.0% |
| ! | GAGGTGTTAGGGGCCACAGA+AGG | - | chr6_2:16147878-16147897 | None:intergenic | 60.0% |
| ! | GCGGCCGCTGTTCGAGTTTC+TGG | - | chr6_2:16145956-16145975 | None:intergenic | 65.0% |
| CGGCCTTGGGACTCCTTCTG+TGG | + | chr6_2:16147862-16147881 | Msa0910990:intron | 65.0% | |
| GGGCCACAGAAGGAGTCCCA+AGG | - | chr6_2:16147868-16147887 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 16144297 | 16148750 | 16144297 | ID=Msa0910990;Name=Msa0910990 |
| chr6_2 | mRNA | 16144297 | 16148750 | 16144297 | ID=Msa0910990-mRNA-1;Parent=Msa0910990;Name=Msa0910990-mRNA-1;_AED=0.12;_eAED=0.12;_QI=61|0.5|0.4|1|0.75|0.6|5|328|154 |
| chr6_2 | exon | 16144297 | 16144574 | 16144297 | ID=Msa0910990-mRNA-1:exon:3571;Parent=Msa0910990-mRNA-1 |
| chr6_2 | exon | 16144712 | 16144721 | 16144712 | ID=Msa0910990-mRNA-1:exon:3572;Parent=Msa0910990-mRNA-1 |
| chr6_2 | exon | 16145030 | 16145079 | 16145030 | ID=Msa0910990-mRNA-1:exon:3573;Parent=Msa0910990-mRNA-1 |
| chr6_2 | exon | 16146263 | 16146368 | 16146263 | ID=Msa0910990-mRNA-1:exon:3574;Parent=Msa0910990-mRNA-1 |
| chr6_2 | exon | 16148341 | 16148750 | 16148341 | ID=Msa0910990-mRNA-1:exon:3575;Parent=Msa0910990-mRNA-1 |
| chr6_2 | five_prime_UTR | 16144297 | 16144357 | 16144297 | ID=Msa0910990-mRNA-1:five_prime_utr;Parent=Msa0910990-mRNA-1 |
| chr6_2 | CDS | 16144358 | 16144574 | 16144358 | ID=Msa0910990-mRNA-1:cds;Parent=Msa0910990-mRNA-1 |
| chr6_2 | CDS | 16144712 | 16144721 | 16144712 | ID=Msa0910990-mRNA-1:cds;Parent=Msa0910990-mRNA-1 |
| chr6_2 | CDS | 16145030 | 16145079 | 16145030 | ID=Msa0910990-mRNA-1:cds;Parent=Msa0910990-mRNA-1 |
| chr6_2 | CDS | 16146263 | 16146368 | 16146263 | ID=Msa0910990-mRNA-1:cds;Parent=Msa0910990-mRNA-1 |
| chr6_2 | CDS | 16148341 | 16148422 | 16148341 | ID=Msa0910990-mRNA-1:cds;Parent=Msa0910990-mRNA-1 |
| chr6_2 | three_prime_UTR | 16148423 | 16148750 | 16148423 | ID=Msa0910990-mRNA-1:three_prime_utr;Parent=Msa0910990-mRNA-1 |
| Gene Sequence |
| Protein sequence |
