Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0915280 | KEH26375.1 | 97.814 | 183 | 3 | 1 | 1 | 182 | 87 | 269 | 7.28e-126 | 365 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0915280 | sp|Q9FLX7|NDUA5_ARATH | 75.796 | 157 | 37 | 1 | 1 | 157 | 1 | 156 | 3.49e-83 | 246 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0003780 | Msa0915280 | 0.805007 | 1.643117e-49 | -8.615850e-47 |
| Msa0888580 | Msa0915280 | 0.883746 | 3.456634e-71 | -8.615850e-47 |
| Msa0915280 | Msa0953150 | 0.897950 | 8.547610e-77 | -8.615850e-47 |
| Msa0915280 | Msa0966270 | 0.819473 | 1.140117e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0915280 | MtrunA17_Chr6g0470231 | 97.814 | 183 | 3 | 1 | 1 | 182 | 87 | 269 | 6.69e-130 | 365 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0915280 | AT5G52840.1 | 75.796 | 157 | 37 | 1 | 1 | 157 | 1 | 156 | 3.54e-84 | 246 |
| Msa0915280 | AT5G52840.2 | 79.808 | 104 | 21 | 0 | 1 | 104 | 1 | 104 | 5.49e-55 | 170 |
| Msa0915280 | AT4G28005.1 | 40.506 | 158 | 37 | 4 | 1 | 157 | 1 | 102 | 5.03e-24 | 91.7 |
Find 53 sgRNAs with CRISPR-Local
Find 283 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAGATTCAACTGTCTTTC+AGG | 0.138753 | 6_2:+31291538 | Msa0915280:three_prime_UTR |
| TGTCTTTATTCTTGCCATTA+AGG | 0.186637 | 6_2:-31286908 | None:intergenic |
| ATTTAGTTTGATGCAATAAA+AGG | 0.239799 | 6_2:-31291498 | None:intergenic |
| TTACAATACCCTTCATCTTC+TGG | 0.262187 | 6_2:-31287024 | None:intergenic |
| ATCAACACTTCTCTTGCATT+TGG | 0.286655 | 6_2:-31286961 | None:intergenic |
| AGCGATGGCACGACCCTTAA+TGG | 0.290344 | 6_2:+31286894 | Msa0915280:CDS |
| GTCTTTATTCTTGCCATTAA+GGG | 0.290759 | 6_2:-31286907 | None:intergenic |
| TTTGTCAAGAAGAAGAAGAT+TGG | 0.344948 | 6_2:+31287082 | Msa0915280:CDS |
| TCAACACTTCTCTTGCATTT+GGG | 0.351069 | 6_2:-31286960 | None:intergenic |
| AGAGCTTTGAATTCTCCTTT+TGG | 0.357093 | 6_2:+31291465 | Msa0915280:three_prime_UTR |
| CTTTACAAGTCATAGACTTA+AGG | 0.359250 | 6_2:+31287059 | Msa0915280:CDS |
| AGACACCTTAGATGCACTTA+TGG | 0.361826 | 6_2:+31291330 | Msa0915280:CDS |
| ATCTCAATTTCGTGATCATC+AGG | 0.365884 | 6_2:-31291235 | None:intergenic |
| TATTGCAGAATGGGATCCTT+GGG | 0.383342 | 6_2:+31291207 | Msa0915280:intron |
| TTGTCAAGAAGAAGAAGATT+GGG | 0.384208 | 6_2:+31287083 | Msa0915280:CDS |
| GTCAGCCATAAGTGCATCTA+AGG | 0.386612 | 6_2:-31291335 | None:intergenic |
| GAAATGGAGTGTTGTTGTTA+TGG | 0.389111 | 6_2:-31286788 | None:intergenic |
| AAGGTGTCTTGAAACTCCTT+AGG | 0.391049 | 6_2:-31291316 | None:intergenic |
| TCTAATGTAGCTGAAGTTCA+TGG | 0.425368 | 6_2:-31291445 | None:intergenic |
| AAACTCATTGGCTATATGAT+TGG | 0.433002 | 6_2:+31287174 | Msa0915280:CDS |
| GACCCTTAACGAGATCAAAA+AGG | 0.437941 | 6_2:+31286999 | Msa0915280:CDS |
| GCAAGAATAAAGACAACAAC+AGG | 0.445081 | 6_2:+31286916 | Msa0915280:CDS |
| CGGTGTTGAGGAACGTGCTT+CGG | 0.452618 | 6_2:-31291280 | None:intergenic |
| TCAGATTCAACTGTCTTTCA+GGG | 0.453671 | 6_2:+31291539 | Msa0915280:three_prime_UTR |
| TGAGGAACGTGCTTCGGAAT+TGG | 0.463485 | 6_2:-31291274 | None:intergenic |
| CAAGATGAACTCAAACTCAT+TGG | 0.466880 | 6_2:+31287162 | Msa0915280:CDS |
| TGTTGTTATGGAGGTTCTGT+TGG | 0.481902 | 6_2:-31286776 | None:intergenic |
| ACAAGAAAAGATGGTGCTGC+TGG | 0.482122 | 6_2:+31291397 | Msa0915280:CDS |
| GTATTGCAGAATGGGATCCT+TGG | 0.482980 | 6_2:+31291206 | Msa0915280:intron |
| ATTGAGAATCGTCTTGGTTG+TGG | 0.487668 | 6_2:+31287111 | Msa0915280:CDS |
| GAATCGTCTTGGTTGTGGTC+AGG | 0.495827 | 6_2:+31287116 | Msa0915280:CDS |
| ATCAAAGATGGAAAAGATAG+AGG | 0.503646 | 6_2:+31291360 | Msa0915280:CDS |
| TATGGCTGACCCATCAAAGA+TGG | 0.511515 | 6_2:+31291348 | Msa0915280:CDS |
| ATGGAGTGTTGTTGTTATGG+AGG | 0.513941 | 6_2:-31286785 | None:intergenic |
| AAAGGAAAATCACATCCAAA+AGG | 0.525164 | 6_2:-31291480 | None:intergenic |
| AGGTGTCTTGAAACTCCTTA+GGG | 0.525753 | 6_2:-31291315 | None:intergenic |
| GAGAAGATTGAGAATCGTCT+TGG | 0.529191 | 6_2:+31287105 | Msa0915280:CDS |
| GTGGCTAAAACAAGAAAAGA+TGG | 0.539846 | 6_2:+31291388 | Msa0915280:CDS |
| TTGTATGCATGAAATGACTT+TGG | 0.540500 | 6_2:+31291623 | Msa0915280:three_prime_UTR |
| TTAAGGGTCGTGCCATCGCT+CGG | 0.541058 | 6_2:-31286891 | None:intergenic |
| CCGTCCTCCTCGTCTCCCTA+AGG | 0.545794 | 6_2:+31291300 | Msa0915280:CDS |
| AGACGAGGAGGACGGTGTTG+AGG | 0.584235 | 6_2:-31291292 | None:intergenic |
| AAGACAACAACAGGAATCGT+AGG | 0.600187 | 6_2:+31286925 | Msa0915280:CDS |
| CAAGATGTTTCTCCGAGCGA+TGG | 0.602157 | 6_2:+31286879 | Msa0915280:exon |
| AAAAGGTTCCAGAAGATGAA+GGG | 0.602923 | 6_2:+31287016 | Msa0915280:CDS |
| GGAAAAGATAGAGGAACTTG+TGG | 0.609007 | 6_2:+31291369 | Msa0915280:CDS |
| TCTCAATTTCGTGATCATCA+GGG | 0.633734 | 6_2:-31291234 | None:intergenic |
| TGATCATCAGGGATACCCCA+AGG | 0.657129 | 6_2:-31291223 | None:intergenic |
| CCTTAGGGAGACGAGGAGGA+CGG | 0.660867 | 6_2:-31291300 | None:intergenic |
| TGATGATCACGAAATTGAGA+TGG | 0.663792 | 6_2:+31291237 | Msa0915280:CDS |
| TGAAACTCCTTAGGGAGACG+AGG | 0.673297 | 6_2:-31291307 | None:intergenic |
| AACTCCTTAGGGAGACGAGG+AGG | 0.696168 | 6_2:-31291304 | None:intergenic |
| ATTGCAGAATGGGATCCTTG+GGG | 0.697431 | 6_2:+31291208 | Msa0915280:intron |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATGTATATTACTAAAAT+AGG | + | chr6_2:31289353-31289372 | Msa0915280:intron | 10.0% |
| !! | TCTTATTATTTAATCATGAT+GGG | - | chr6_2:31288828-31288847 | None:intergenic | 15.0% |
| !!! | ATCTCTTTATTTGTATATAT+AGG | + | chr6_2:31288875-31288894 | Msa0915280:intron | 15.0% |
| !!! | TCTCTTTATTTGTATATATA+GGG | + | chr6_2:31288876-31288895 | Msa0915280:intron | 15.0% |
| !! | AATTATTTCATAATCAATTC+TGG | - | chr6_2:31289207-31289226 | None:intergenic | 15.0% |
| !!! | TAACATAATTGATTTATGTT+TGG | + | chr6_2:31289263-31289282 | Msa0915280:intron | 15.0% |
| !!! | TATAATGTGTATTTTATGTT+TGG | + | chr6_2:31290955-31290974 | Msa0915280:intron | 15.0% |
| !! | ATTATCAAACAATTAAGATT+TGG | - | chr6_2:31291163-31291182 | None:intergenic | 15.0% |
| !!! | TTTTGATTTTTTTTGTGATC+TGG | + | chr6_2:31287232-31287251 | Msa0915280:intron | 20.0% |
| !!! | TTTTTACAATGTTTTTGTTG+AGG | + | chr6_2:31287283-31287302 | Msa0915280:intron | 20.0% |
| !! | GTTAGGAATAATGATAAATT+GGG | + | chr6_2:31287305-31287324 | Msa0915280:intron | 20.0% |
| !!! | TTTGTGTTTTTATACAGTAA+GGG | + | chr6_2:31287456-31287475 | Msa0915280:intron | 20.0% |
| !! | CCATAATCAATTATTATCAT+TGG | - | chr6_2:31287954-31287973 | None:intergenic | 20.0% |
| !! | CCAATGATAATAATTGATTA+TGG | + | chr6_2:31287951-31287970 | Msa0915280:intron | 20.0% |
| !! | AATTCAATACTCTTATCAAA+AGG | + | chr6_2:31288051-31288070 | Msa0915280:intron | 20.0% |
| !! | AAATATCACATTTGAATCTA+AGG | - | chr6_2:31288116-31288135 | None:intergenic | 20.0% |
| !!! | GATCAAAATTCATTGATTTT+AGG | + | chr6_2:31288479-31288498 | Msa0915280:intron | 20.0% |
| !!! | TTTGGTTATTTTGTTTTTCT+AGG | + | chr6_2:31288570-31288589 | Msa0915280:intron | 20.0% |
| !!! | TTGGTTATTTTGTTTTTCTA+GGG | + | chr6_2:31288571-31288590 | Msa0915280:intron | 20.0% |
| !!! | TTTTACTATTTGTTGCAAAT+TGG | + | chr6_2:31288722-31288741 | Msa0915280:intron | 20.0% |
| !!! | TTTACTATTTGTTGCAAATT+GGG | + | chr6_2:31288723-31288742 | Msa0915280:intron | 20.0% |
| !! | CTCTTATTATTTAATCATGA+TGG | - | chr6_2:31288829-31288848 | None:intergenic | 20.0% |
| !! | CATCATGATTAAATAATAAG+AGG | + | chr6_2:31288827-31288846 | Msa0915280:intron | 20.0% |
| !! | TTCTAGTATTTAACTCTAAT+GGG | - | chr6_2:31288853-31288872 | None:intergenic | 20.0% |
| !! | ATTCTAGTATTTAACTCTAA+TGG | - | chr6_2:31288854-31288873 | None:intergenic | 20.0% |
| !!! | CTCTTTATTTGTATATATAG+GGG | + | chr6_2:31288877-31288896 | Msa0915280:intron | 20.0% |
| !!! | TTTTCCATTTGTATCAATAA+AGG | + | chr6_2:31289029-31289048 | Msa0915280:intron | 20.0% |
| !! | GATGGTAATTAAATAAAACA+GGG | - | chr6_2:31289057-31289076 | None:intergenic | 20.0% |
| !! | AGATGGTAATTAAATAAAAC+AGG | - | chr6_2:31289058-31289077 | None:intergenic | 20.0% |
| !! | AAAAAGTAGGGAATTTATTT+GGG | + | chr6_2:31289153-31289172 | Msa0915280:intron | 20.0% |
| !!! | GATTTTGAGATAATTGATTT+TGG | + | chr6_2:31289227-31289246 | Msa0915280:intron | 20.0% |
| !!! | TTGTTGTTCTTTTGTATTAT+CGG | + | chr6_2:31289738-31289757 | Msa0915280:intron | 20.0% |
| !! | TTAGACATATATTCAACTAT+AGG | - | chr6_2:31290134-31290153 | None:intergenic | 20.0% |
| !!! | TTCTATGTTGATTAATATGT+GGG | - | chr6_2:31290386-31290405 | None:intergenic | 20.0% |
| !!! | TTTCTATGTTGATTAATATG+TGG | - | chr6_2:31290387-31290406 | None:intergenic | 20.0% |
| !!! | TAAAAAAATAGGTTTTTCGA+AGG | - | chr6_2:31290440-31290459 | None:intergenic | 20.0% |
| !! | AAATTTAAACTCATAACACA+AGG | - | chr6_2:31290748-31290767 | None:intergenic | 20.0% |
| !!! | TTTAGGATCTTCAAAAATTT+AGG | - | chr6_2:31290830-31290849 | None:intergenic | 20.0% |
| !!! | AACTAAATGTCTAATGTTTT+AGG | - | chr6_2:31290847-31290866 | None:intergenic | 20.0% |
| !! | AAAACATTAGACATTTAGTT+AGG | + | chr6_2:31290847-31290866 | Msa0915280:intron | 20.0% |
| !! | AAACATTAGACATTTAGTTA+GGG | + | chr6_2:31290848-31290867 | Msa0915280:intron | 20.0% |
| !! | TACGAAATACTAATAAAGAA+TGG | + | chr6_2:31290931-31290950 | Msa0915280:intron | 20.0% |
| !!! | TTTTTTTCACTTCATGAATT+TGG | + | chr6_2:31291032-31291051 | Msa0915280:intron | 20.0% |
| !!! | CATGAATTTGGTAATTATTA+AGG | + | chr6_2:31291044-31291063 | Msa0915280:intron | 20.0% |
| !!! | ATTTAGTTTGATGCAATAAA+AGG | - | chr6_2:31291501-31291520 | None:intergenic | 20.0% |
| ! | GGTTAGGAATAATGATAAAT+TGG | + | chr6_2:31287304-31287323 | Msa0915280:intron | 25.0% |
| !!! | GTTTGTGTTTTTATACAGTA+AGG | + | chr6_2:31287455-31287474 | Msa0915280:intron | 25.0% |
| ! | TTTCATCAATGCATAAAGAA+AGG | - | chr6_2:31287505-31287524 | None:intergenic | 25.0% |
| ! | ACATTCAATTCATTCATTTG+TGG | + | chr6_2:31287848-31287867 | Msa0915280:intron | 25.0% |
| !!! | TGATCTGTTTTGTGTTTTTT+AGG | + | chr6_2:31287878-31287897 | Msa0915280:intron | 25.0% |
| !! | TTCTGTATTTTATTGAGGTT+AGG | + | chr6_2:31287904-31287923 | Msa0915280:intron | 25.0% |
| !!! | TTTTTTTCTTGTTACAGAGA+GGG | - | chr6_2:31288237-31288256 | None:intergenic | 25.0% |
| !!! | TTTTTTTTCTTGTTACAGAG+AGG | - | chr6_2:31288238-31288257 | None:intergenic | 25.0% |
| !!! | AATGAATTTTGATCCATCAA+GGG | - | chr6_2:31288473-31288492 | None:intergenic | 25.0% |
| !!! | ATTTTGTTTTTCTAGGGTTT+TGG | + | chr6_2:31288577-31288596 | Msa0915280:intron | 25.0% |
| ! | GAATGAAAGTTAGATGAAAA+TGG | + | chr6_2:31288635-31288654 | Msa0915280:intron | 25.0% |
| ! | TAATTAGTAGGTCGTTAATT+AGG | + | chr6_2:31288778-31288797 | Msa0915280:intron | 25.0% |
| ! | TTAGGTAGATTATTAGTAAG+TGG | + | chr6_2:31288802-31288821 | Msa0915280:intron | 25.0% |
| ! | CAAACAAGAAAATAAACAGA+TGG | - | chr6_2:31289075-31289094 | None:intergenic | 25.0% |
| !!! | CATCTGTTTATTTTCTTGTT+TGG | + | chr6_2:31289073-31289092 | Msa0915280:intron | 25.0% |
| ! | GAAAAAGTAGGGAATTTATT+TGG | + | chr6_2:31289152-31289171 | Msa0915280:intron | 25.0% |
| !! | TGAAATTAAGAGAAAGTGTA+AGG | + | chr6_2:31289432-31289451 | Msa0915280:intron | 25.0% |
| !! | GAAATTAAGAGAAAGTGTAA+GGG | + | chr6_2:31289433-31289452 | Msa0915280:intron | 25.0% |
| ! | AAGCTAAAAGTGATTTAACT+TGG | - | chr6_2:31289596-31289615 | None:intergenic | 25.0% |
| ! | AATCCATATTCGTATATGTT+TGG | - | chr6_2:31289652-31289671 | None:intergenic | 25.0% |
| ! | ATTGAGAAAATTCTAAACCA+TGG | - | chr6_2:31289700-31289719 | None:intergenic | 25.0% |
| !! | TGTTGTTCTTTTGTATTATC+GGG | + | chr6_2:31289739-31289758 | Msa0915280:intron | 25.0% |
| ! | ACAATAAATACGGTATAACA+CGG | - | chr6_2:31290019-31290038 | None:intergenic | 25.0% |
| ! | ATATATTCAACTATAGGTGT+CGG | - | chr6_2:31290128-31290147 | None:intergenic | 25.0% |
| ! | ATGTGGTTACATTCAATTAT+TGG | + | chr6_2:31290186-31290205 | Msa0915280:intron | 25.0% |
| !!! | CTTGTTTTCTCATTGAAAAA+AGG | - | chr6_2:31290346-31290365 | None:intergenic | 25.0% |
| ! | TAAGAGCCTGTATTAAAAAA+AGG | - | chr6_2:31290683-31290702 | None:intergenic | 25.0% |
| ! | AACATTAGACATTTAGTTAG+GGG | + | chr6_2:31290849-31290868 | Msa0915280:intron | 25.0% |
| ! | GTATTTCGTAAAATTCACAT+CGG | - | chr6_2:31290921-31290940 | None:intergenic | 25.0% |
| GTCTTTATTCTTGCCATTAA+GGG | - | chr6_2:31286910-31286929 | None:intergenic | 30.0% | |
| TGTCTTTATTCTTGCCATTA+AGG | - | chr6_2:31286911-31286930 | None:intergenic | 30.0% | |
| ! | AACCTTTTTGATCTCGTTAA+GGG | - | chr6_2:31287004-31287023 | None:intergenic | 30.0% |
| CTTTACAAGTCATAGACTTA+AGG | + | chr6_2:31287059-31287078 | Msa0915280:CDS | 30.0% | |
| TTTGTCAAGAAGAAGAAGAT+TGG | + | chr6_2:31287082-31287101 | Msa0915280:CDS | 30.0% | |
| TTGTCAAGAAGAAGAAGATT+GGG | + | chr6_2:31287083-31287102 | Msa0915280:CDS | 30.0% | |
| ! | AAACTCATTGGCTATATGAT+TGG | + | chr6_2:31287174-31287193 | Msa0915280:CDS | 30.0% |
| !! | ACAATGTTTTTGTTGAGGTT+AGG | + | chr6_2:31287288-31287307 | Msa0915280:intron | 30.0% |
| !! | CGATCTGATTTGTGTATTTT+AGG | + | chr6_2:31287416-31287435 | Msa0915280:intron | 30.0% |
| TGTCTTATGTGTCTTTATTG+AGG | + | chr6_2:31287669-31287688 | Msa0915280:intron | 30.0% | |
| CTTTATTGAGGCTATGAATT+AGG | + | chr6_2:31287681-31287700 | Msa0915280:intron | 30.0% | |
| ! | ATTTAGAGTGTAAAGTGAGT+AGG | + | chr6_2:31287735-31287754 | Msa0915280:intron | 30.0% |
| ! | GGATGTTCTGTATTTTATTG+AGG | + | chr6_2:31287899-31287918 | Msa0915280:intron | 30.0% |
| TACTAACAAATGACTAGACT+GGG | - | chr6_2:31288155-31288174 | None:intergenic | 30.0% | |
| ! | TTTGTTAGTAGCTGATGTTT+TGG | + | chr6_2:31288165-31288184 | Msa0915280:intron | 30.0% |
| ! | TTGTTAGTAGCTGATGTTTT+GGG | + | chr6_2:31288166-31288185 | Msa0915280:intron | 30.0% |
| CAAATTATTACCACTGTTGA+CGG | + | chr6_2:31288354-31288373 | Msa0915280:intron | 30.0% | |
| AAATTATTACCACTGTTGAC+GGG | + | chr6_2:31288355-31288374 | Msa0915280:intron | 30.0% | |
| TTTCAGTGCTTCATAATCAA+TGG | + | chr6_2:31288406-31288425 | Msa0915280:intron | 30.0% | |
| ! | GGTTGATATTTCAATCACTT+AGG | - | chr6_2:31288452-31288471 | None:intergenic | 30.0% |
| ATTGAAATATCAACCCTTGA+TGG | + | chr6_2:31288457-31288476 | Msa0915280:intron | 30.0% | |
| !! | CAATGAATTTTGATCCATCA+AGG | - | chr6_2:31288474-31288493 | None:intergenic | 30.0% |
| !! | GATTTTAGGTGATTTCACTT+TGG | + | chr6_2:31288493-31288512 | Msa0915280:intron | 30.0% |
| ! | GACTGTTATGTTATGTGTTT+TGG | + | chr6_2:31288552-31288571 | Msa0915280:intron | 30.0% |
| GAAAGTTAGATGAAAATGGT+AGG | + | chr6_2:31288639-31288658 | Msa0915280:intron | 30.0% | |
| GAAAATGGTAGGCAATTATT+TGG | + | chr6_2:31288650-31288669 | Msa0915280:intron | 30.0% | |
| TTAAAACACCCTCTCATATT+AGG | - | chr6_2:31288757-31288776 | None:intergenic | 30.0% | |
| !! | GGGTGTTTTAAGTAATTAGT+AGG | + | chr6_2:31288766-31288785 | Msa0915280:intron | 30.0% |
| TGTATATATAGGGGAATTCT+TGG | + | chr6_2:31288886-31288905 | Msa0915280:intron | 30.0% | |
| GTATATATAGGGGAATTCTT+GGG | + | chr6_2:31288887-31288906 | Msa0915280:intron | 30.0% | |
| ! | ACGGAATAACTTTTCTGTTT+AGG | + | chr6_2:31288924-31288943 | Msa0915280:intron | 30.0% |
| ! | CGGAATAACTTTTCTGTTTA+GGG | + | chr6_2:31288925-31288944 | Msa0915280:intron | 30.0% |
| GTTACTGTTAATTCGATTCT+AGG | + | chr6_2:31289100-31289119 | Msa0915280:intron | 30.0% | |
| !! | TGTTGTCGATTTATGATGTT+TGG | + | chr6_2:31289307-31289326 | Msa0915280:intron | 30.0% |
| !! | GTTGTCGATTTATGATGTTT+GGG | + | chr6_2:31289308-31289327 | Msa0915280:intron | 30.0% |
| ! | CATACTAGAATCGATTCAAT+TGG | + | chr6_2:31289480-31289499 | Msa0915280:intron | 30.0% |
| CAACCAAACATATACGAATA+TGG | + | chr6_2:31289646-31289665 | Msa0915280:intron | 30.0% | |
| ATATAGTATTCAATGCTCCA+TGG | + | chr6_2:31289680-31289699 | Msa0915280:intron | 30.0% | |
| ! | GTAACTCATCATATTTTACC+TGG | + | chr6_2:31289812-31289831 | Msa0915280:intron | 30.0% |
| ATGTATGTTGTTCATTCATG+TGG | + | chr6_2:31289888-31289907 | Msa0915280:intron | 30.0% | |
| ! | TCATTCACACAATTCTAGAA+AGG | - | chr6_2:31289959-31289978 | None:intergenic | 30.0% |
| CAGAATGGACACAATAAATA+CGG | - | chr6_2:31290029-31290048 | None:intergenic | 30.0% | |
| !!! | CCATTTTTTGTTACACAGAA+TGG | - | chr6_2:31290044-31290063 | None:intergenic | 30.0% |
| CCATTCTGTGTAACAAAAAA+TGG | + | chr6_2:31290041-31290060 | Msa0915280:intron | 30.0% | |
| GTTGAAATTACGTCAAAAGT+GGG | - | chr6_2:31290303-31290322 | None:intergenic | 30.0% | |
| TGTTGAAATTACGTCAAAAG+TGG | - | chr6_2:31290304-31290323 | None:intergenic | 30.0% | |
| AAAAAGGTAGTGACTTATGT+AGG | - | chr6_2:31290330-31290349 | None:intergenic | 30.0% | |
| !! | TGTGGGTTTTATAGTCTTAA+TGG | - | chr6_2:31290369-31290388 | None:intergenic | 30.0% |
| !! | TAGGTTTTTCGAAGGAAAAA+TGG | - | chr6_2:31290432-31290451 | None:intergenic | 30.0% |
| ! | GTTCTAGGCTGTAAAAAAAT+AGG | - | chr6_2:31290451-31290470 | None:intergenic | 30.0% |
| ! | AAACAGATTGGTGTTCTATT+TGG | - | chr6_2:31290485-31290504 | None:intergenic | 30.0% |
| GTTACTAGAGAAAAACAGAT+TGG | - | chr6_2:31290497-31290516 | None:intergenic | 30.0% | |
| GAACATAAATGTTGACAAAG+AGG | - | chr6_2:31290570-31290589 | None:intergenic | 30.0% | |
| CAGATAATGACAGAGAAATA+GGG | - | chr6_2:31290647-31290666 | None:intergenic | 30.0% | |
| TCAGATAATGACAGAGAAAT+AGG | - | chr6_2:31290648-31290667 | None:intergenic | 30.0% | |
| GTCATTATCTGATATTATCG+AGG | + | chr6_2:31290656-31290675 | Msa0915280:intron | 30.0% | |
| !!! | AGGCTCTTAATTTTTTTCAG+TGG | + | chr6_2:31290694-31290713 | Msa0915280:intron | 30.0% |
| !! | TCATTTGCTGTGTAAAATAC+AGG | + | chr6_2:31290780-31290799 | Msa0915280:intron | 30.0% |
| TTATGTGTTGTATTGCAGAA+TGG | + | chr6_2:31291197-31291216 | Msa0915280:intron | 30.0% | |
| TATGTGTTGTATTGCAGAAT+GGG | + | chr6_2:31291198-31291217 | Msa0915280:intron | 30.0% | |
| ! | CTATCTTTTCCATCTTTGAT+GGG | - | chr6_2:31291360-31291379 | None:intergenic | 30.0% |
| ! | TCTATCTTTTCCATCTTTGA+TGG | - | chr6_2:31291361-31291380 | None:intergenic | 30.0% |
| ATCAAAGATGGAAAAGATAG+AGG | + | chr6_2:31291360-31291379 | Msa0915280:CDS | 30.0% | |
| AAAGGAAAATCACATCCAAA+AGG | - | chr6_2:31291483-31291502 | None:intergenic | 30.0% | |
| !!! | TTCAAGTTTTTTTGGAGCAA+AGG | - | chr6_2:31291571-31291590 | None:intergenic | 30.0% |
| !!! | TCAACCAGTTCAAGTTTTTT+TGG | - | chr6_2:31291579-31291598 | None:intergenic | 30.0% |
| TTGTATGCATGAAATGACTT+TGG | + | chr6_2:31291623-31291642 | Msa0915280:three_prime_UTR | 30.0% | |
| !! | GAAATGGAGTGTTGTTGTTA+TGG | - | chr6_2:31286791-31286810 | None:intergenic | 35.0% |
| GCAAGAATAAAGACAACAAC+AGG | + | chr6_2:31286916-31286935 | Msa0915280:CDS | 35.0% | |
| TCAACACTTCTCTTGCATTT+GGG | - | chr6_2:31286963-31286982 | None:intergenic | 35.0% | |
| ATCAACACTTCTCTTGCATT+TGG | - | chr6_2:31286964-31286983 | None:intergenic | 35.0% | |
| ! | GAACCTTTTTGATCTCGTTA+AGG | - | chr6_2:31287005-31287024 | None:intergenic | 35.0% |
| AAAAAGGTTCCAGAAGATGA+AGG | + | chr6_2:31287015-31287034 | Msa0915280:CDS | 35.0% | |
| AAAAGGTTCCAGAAGATGAA+GGG | + | chr6_2:31287016-31287035 | Msa0915280:CDS | 35.0% | |
| TTACAATACCCTTCATCTTC+TGG | - | chr6_2:31287027-31287046 | None:intergenic | 35.0% | |
| CAAGATGAACTCAAACTCAT+TGG | + | chr6_2:31287162-31287181 | Msa0915280:CDS | 35.0% | |
| !!! | CCTTTGATAGGAAGTGTTTT+CGG | + | chr6_2:31287783-31287802 | Msa0915280:intron | 35.0% |
| GTGAGTATGATCAATAGTCT+CGG | + | chr6_2:31288027-31288046 | Msa0915280:intron | 35.0% | |
| CTACTAACAAATGACTAGAC+TGG | - | chr6_2:31288156-31288175 | None:intergenic | 35.0% | |
| ! | TGTTAGTAGCTGATGTTTTG+GGG | + | chr6_2:31288167-31288186 | Msa0915280:intron | 35.0% |
| ACTACATTACAACCAAGTGA+GGG | - | chr6_2:31288201-31288220 | None:intergenic | 35.0% | |
| TTTAGGTGATTTCACTTTGG+TGG | + | chr6_2:31288496-31288515 | Msa0915280:intron | 35.0% | |
| AATGGTAGGCAATTATTTGG+AGG | + | chr6_2:31288653-31288672 | Msa0915280:intron | 35.0% | |
| ATGGTAGGCAATTATTTGGA+GGG | + | chr6_2:31288654-31288673 | Msa0915280:intron | 35.0% | |
| GTAGGTCGTTAATTAGGTTT+AGG | + | chr6_2:31288784-31288803 | Msa0915280:intron | 35.0% | |
| !!! | ATTCTTGGGAGTTTTAGAGT+TGG | + | chr6_2:31288901-31288920 | Msa0915280:intron | 35.0% |
| GGTGCCTTTATTGATACAAA+TGG | - | chr6_2:31289036-31289055 | None:intergenic | 35.0% | |
| !! | TAATTCGATTCTAGGATCCA+TGG | + | chr6_2:31289108-31289127 | Msa0915280:intron | 35.0% |
| !! | AATTCGATTCTAGGATCCAT+GGG | + | chr6_2:31289109-31289128 | Msa0915280:intron | 35.0% |
| !!! | GCTACAGATAGTAGCTTTTT+TGG | - | chr6_2:31289506-31289525 | None:intergenic | 35.0% |
| ! | GTTCTTTTGTATTATCGGGT+TGG | + | chr6_2:31289743-31289762 | Msa0915280:intron | 35.0% |
| ! | TACATAGAGCATTATGTACC+AGG | - | chr6_2:31289833-31289852 | None:intergenic | 35.0% |
| ! | AATTGTGTGAATGAGTACTG+AGG | + | chr6_2:31289965-31289984 | Msa0915280:intron | 35.0% |
| !! | ATTGTGTGAATGAGTACTGA+GGG | + | chr6_2:31289966-31289985 | Msa0915280:intron | 35.0% |
| GTTCTATTTGGATACAGTTG+TGG | - | chr6_2:31290473-31290492 | None:intergenic | 35.0% | |
| CATATAGGAATAGAGAGACT+TGG | - | chr6_2:31290611-31290630 | None:intergenic | 35.0% | |
| GGAGACTTGCAAAAACATAT+AGG | - | chr6_2:31290626-31290645 | None:intergenic | 35.0% | |
| !!! | CGAGGACCTTTTTTTAATAC+AGG | + | chr6_2:31290674-31290693 | Msa0915280:intron | 35.0% |
| CAGTGGTTCTTATTCTTGTT+TGG | + | chr6_2:31290711-31290730 | Msa0915280:intron | 35.0% | |
| CTAACTAGGAAGAGAATTGA+TGG | - | chr6_2:31290893-31290912 | None:intergenic | 35.0% | |
| ATGCATCTTACTACTAAAGC+TGG | + | chr6_2:31291067-31291086 | Msa0915280:intron | 35.0% | |
| TCTCAATTTCGTGATCATCA+GGG | - | chr6_2:31291237-31291256 | None:intergenic | 35.0% | |
| ATCTCAATTTCGTGATCATC+AGG | - | chr6_2:31291238-31291257 | None:intergenic | 35.0% | |
| TGATGATCACGAAATTGAGA+TGG | + | chr6_2:31291237-31291256 | Msa0915280:CDS | 35.0% | |
| GTGGCTAAAACAAGAAAAGA+TGG | + | chr6_2:31291388-31291407 | Msa0915280:CDS | 35.0% | |
| TCTAATGTAGCTGAAGTTCA+TGG | - | chr6_2:31291448-31291467 | None:intergenic | 35.0% | |
| !!! | AGAGCTTTGAATTCTCCTTT+TGG | + | chr6_2:31291465-31291484 | Msa0915280:three_prime_UTR | 35.0% |
| TTCAGATTCAACTGTCTTTC+AGG | + | chr6_2:31291538-31291557 | Msa0915280:three_prime_UTR | 35.0% | |
| TCAGATTCAACTGTCTTTCA+GGG | + | chr6_2:31291539-31291558 | Msa0915280:three_prime_UTR | 35.0% | |
| !!! | GTTTTTTTGGAGCAAAGGAT+TGG | - | chr6_2:31291566-31291585 | None:intergenic | 35.0% |
| TGCTCCAAAAAAACTTGAAC+TGG | + | chr6_2:31291572-31291591 | Msa0915280:three_prime_UTR | 35.0% | |
| TGTTGTTATGGAGGTTCTGT+TGG | - | chr6_2:31286779-31286798 | None:intergenic | 40.0% | |
| !! | ATGGAGTGTTGTTGTTATGG+AGG | - | chr6_2:31286788-31286807 | None:intergenic | 40.0% |
| AAGACAACAACAGGAATCGT+AGG | + | chr6_2:31286925-31286944 | Msa0915280:CDS | 40.0% | |
| GACCCTTAACGAGATCAAAA+AGG | + | chr6_2:31286999-31287018 | Msa0915280:CDS | 40.0% | |
| GAGAAGATTGAGAATCGTCT+TGG | + | chr6_2:31287105-31287124 | Msa0915280:CDS | 40.0% | |
| ATTGAGAATCGTCTTGGTTG+TGG | + | chr6_2:31287111-31287130 | Msa0915280:CDS | 40.0% | |
| !! | TATCAAAGGTGTTGGTGCAA+TGG | - | chr6_2:31287772-31287791 | None:intergenic | 40.0% |
| ATTGCACCAACACCTTTGAT+AGG | + | chr6_2:31287771-31287790 | Msa0915280:intron | 40.0% | |
| ! | ACACTTCCTATCAAAGGTGT+TGG | - | chr6_2:31287780-31287799 | None:intergenic | 40.0% |
| CCGAAAACACTTCCTATCAA+AGG | - | chr6_2:31287786-31287805 | None:intergenic | 40.0% | |
| ! | CCAAGATTAGCTAAAGCATC+TGG | - | chr6_2:31288088-31288107 | None:intergenic | 40.0% |
| CCAGATGCTTTAGCTAATCT+TGG | + | chr6_2:31288085-31288104 | Msa0915280:intron | 40.0% | |
| AACAAATGACTAGACTGGGT+CGG | - | chr6_2:31288151-31288170 | None:intergenic | 40.0% | |
| CTACATTACAACCAAGTGAG+GGG | - | chr6_2:31288200-31288219 | None:intergenic | 40.0% | |
| GACTACATTACAACCAAGTG+AGG | - | chr6_2:31288202-31288221 | None:intergenic | 40.0% | |
| ! | GTAATGTAGTCCCTTTTTCC+CGG | + | chr6_2:31288211-31288230 | Msa0915280:intron | 40.0% |
| ! | GTTTTTGACACTGACACATG+TGG | + | chr6_2:31288307-31288326 | Msa0915280:intron | 40.0% |
| TTTGTTGCAAATTGGGCGTT+AGG | + | chr6_2:31288730-31288749 | Msa0915280:intron | 40.0% | |
| CGTTAGGACCTAATATGAGA+GGG | + | chr6_2:31288746-31288765 | Msa0915280:intron | 40.0% | |
| !!! | TTGGGAGTTTTAGAGTTGGA+CGG | + | chr6_2:31288905-31288924 | Msa0915280:intron | 40.0% |
| ! | TTTCTGTTTAGGGCTAGAGT+AGG | + | chr6_2:31288935-31288954 | Msa0915280:intron | 40.0% |
| ! | TTTTCAGCACCTCCAATGAT+AGG | - | chr6_2:31289137-31289156 | None:intergenic | 40.0% |
| !! | ATTGGAGGTGCTGAAAAAGT+AGG | + | chr6_2:31289140-31289159 | Msa0915280:intron | 40.0% |
| !! | TTGGAGGTGCTGAAAAAGTA+GGG | + | chr6_2:31289141-31289160 | Msa0915280:intron | 40.0% |
| ! | TTTGGGATGAAGTGTGTGTT+TGG | + | chr6_2:31289170-31289189 | Msa0915280:intron | 40.0% |
| ! | GAGAAAGTGTAAGGGTAGTT+AGG | + | chr6_2:31289441-31289460 | Msa0915280:intron | 40.0% |
| TGTAAGGGTAGTTAGGTAAG+AGG | + | chr6_2:31289448-31289467 | Msa0915280:intron | 40.0% | |
| GTTGAAACTCTCTAAACGTG+CGG | - | chr6_2:31289623-31289642 | None:intergenic | 40.0% | |
| !! | GAAGGAAAAATGGCGTTGAT+TGG | - | chr6_2:31290422-31290441 | None:intergenic | 40.0% |
| TTGGATACAGTTGTGGTTCT+AGG | - | chr6_2:31290466-31290485 | None:intergenic | 40.0% | |
| TATTGCAGAATGGGATCCTT+GGG | + | chr6_2:31291207-31291226 | Msa0915280:intron | 40.0% | |
| AGGTGTCTTGAAACTCCTTA+GGG | - | chr6_2:31291318-31291337 | None:intergenic | 40.0% | |
| ! | AAGGTGTCTTGAAACTCCTT+AGG | - | chr6_2:31291319-31291338 | None:intergenic | 40.0% |
| AGACACCTTAGATGCACTTA+TGG | + | chr6_2:31291330-31291349 | Msa0915280:CDS | 40.0% | |
| GGAAAAGATAGAGGAACTTG+TGG | + | chr6_2:31291369-31291388 | Msa0915280:CDS | 40.0% | |
| !!! | CTTTTTGGGTTCTTCATTGG+AGG | - | chr6_2:31291425-31291444 | None:intergenic | 40.0% |
| !!! | TGGCTTTTTGGGTTCTTCAT+TGG | - | chr6_2:31291428-31291447 | None:intergenic | 40.0% |
| ! | GCTGAAGTTCATGGCTTTTT+GGG | - | chr6_2:31291439-31291458 | None:intergenic | 40.0% |
| ! | AGCTGAAGTTCATGGCTTTT+TGG | - | chr6_2:31291440-31291459 | None:intergenic | 40.0% |
| ! | CACGTGTGTTGTGTTGATGT+CGG | - | chr6_2:31287825-31287844 | None:intergenic | 45.0% |
| TTTCTTGTTACAGAGAGGGC+CGG | - | chr6_2:31288233-31288252 | None:intergenic | 45.0% | |
| ! | TATTACCACTGTTGACGGGT+TGG | + | chr6_2:31288359-31288378 | Msa0915280:intron | 45.0% |
| ! | TGTGTGTGCGCTTTTCAATG+TGG | + | chr6_2:31288608-31288627 | Msa0915280:intron | 45.0% |
| ! | GTGTGTGCGCTTTTCAATGT+GGG | + | chr6_2:31288609-31288628 | Msa0915280:intron | 45.0% |
| GCGTTAGGACCTAATATGAG+AGG | + | chr6_2:31288745-31288764 | Msa0915280:intron | 45.0% | |
| AGGATTCCTCTGAGTTGTGT+CGG | + | chr6_2:31288955-31288974 | Msa0915280:intron | 45.0% | |
| TTGTGTCGGAGCTTTGCTTT+GGG | + | chr6_2:31288969-31288988 | Msa0915280:intron | 45.0% | |
| GATCCATGGGTTCCTATCAT+TGG | + | chr6_2:31289122-31289141 | Msa0915280:intron | 45.0% | |
| !! | GAAGTGTGTGTTTGGTTCTG+CGG | + | chr6_2:31289178-31289197 | Msa0915280:intron | 45.0% |
| AGTTAGGTAAGAGGACAGCA+AGG | + | chr6_2:31289457-31289476 | Msa0915280:intron | 45.0% | |
| !! | GAATGAGTACTGAGGGAAAC+AGG | + | chr6_2:31289973-31289992 | Msa0915280:intron | 45.0% |
| TCTAAGTGTCCGACATGTGT+TGG | + | chr6_2:31290149-31290168 | Msa0915280:intron | 45.0% | |
| TGTCAGACACCAACACATGT+CGG | - | chr6_2:31290161-31290180 | None:intergenic | 45.0% | |
| TGGTGTCTGACATCAACATG+TGG | + | chr6_2:31290169-31290188 | Msa0915280:intron | 45.0% | |
| AAAGTGGGCACAACTTGTGT+CGG | - | chr6_2:31290288-31290307 | None:intergenic | 45.0% | |
| TAGAGAGACTTGGAACAGAG+AGG | - | chr6_2:31290601-31290620 | None:intergenic | 45.0% | |
| !! | TCACATCGGTGTCACTAACT+AGG | - | chr6_2:31290907-31290926 | None:intergenic | 45.0% |
| GTATTGCAGAATGGGATCCT+TGG | + | chr6_2:31291206-31291225 | Msa0915280:intron | 45.0% | |
| ATTGCAGAATGGGATCCTTG+GGG | + | chr6_2:31291208-31291227 | Msa0915280:intron | 45.0% | |
| GTCAGCCATAAGTGCATCTA+AGG | - | chr6_2:31291338-31291357 | None:intergenic | 45.0% | |
| TATGGCTGACCCATCAAAGA+TGG | + | chr6_2:31291348-31291367 | Msa0915280:CDS | 45.0% | |
| !! | ACAAGAAAAGATGGTGCTGC+TGG | + | chr6_2:31291397-31291416 | Msa0915280:CDS | 45.0% |
| CTCTCTCTCTCTCTCGGAAA+TGG | - | chr6_2:31286807-31286826 | None:intergenic | 50.0% | |
| CTCTCTCTCTCTCTCTCTCT+CGG | - | chr6_2:31286813-31286832 | None:intergenic | 50.0% | |
| CAAGATGTTTCTCCGAGCGA+TGG | + | chr6_2:31286879-31286898 | Msa0915280:exon | 50.0% | |
| GAATCGTCTTGGTTGTGGTC+AGG | + | chr6_2:31287116-31287135 | Msa0915280:CDS | 50.0% | |
| !! | AGGTGTTGGTGCAATGGAGA+CGG | - | chr6_2:31287766-31287785 | None:intergenic | 50.0% |
| ! | TGTTGTGTTGATGTCGGACG+CGG | - | chr6_2:31287819-31287838 | None:intergenic | 50.0% |
| TTCTTGTTACAGAGAGGGCC+GGG | - | chr6_2:31288232-31288251 | None:intergenic | 50.0% | |
| ACCACAAACACCTGTGCAGA+AGG | + | chr6_2:31288266-31288285 | Msa0915280:intron | 50.0% | |
| ACCTTCTGCACAGGTGTTTG+TGG | - | chr6_2:31288270-31288289 | None:intergenic | 50.0% | |
| TAACACCAACCCGTCAACAG+TGG | - | chr6_2:31288367-31288386 | None:intergenic | 50.0% | |
| !! | TGACGGGTTGGTGTTATGTC+TGG | + | chr6_2:31288371-31288390 | Msa0915280:intron | 50.0% |
| AAAGCTCCGACACAACTCAG+AGG | - | chr6_2:31288964-31288983 | None:intergenic | 50.0% | |
| GTTGTGTCGGAGCTTTGCTT+TGG | + | chr6_2:31288968-31288987 | Msa0915280:intron | 50.0% | |
| CCTCCAATGATAGGAACCCA+TGG | - | chr6_2:31289128-31289147 | None:intergenic | 50.0% | |
| CCATGGGTTCCTATCATTGG+AGG | + | chr6_2:31289125-31289144 | Msa0915280:intron | 50.0% | |
| AAGTGGGCACAACTTGTGTC+GGG | - | chr6_2:31290287-31290306 | None:intergenic | 50.0% | |
| TGATCATCAGGGATACCCCA+AGG | - | chr6_2:31291226-31291245 | None:intergenic | 50.0% | |
| TGAGGAACGTGCTTCGGAAT+TGG | - | chr6_2:31291277-31291296 | None:intergenic | 50.0% | |
| TGAAACTCCTTAGGGAGACG+AGG | - | chr6_2:31291310-31291329 | None:intergenic | 50.0% | |
| TTAAGGGTCGTGCCATCGCT+CGG | - | chr6_2:31286894-31286913 | None:intergenic | 55.0% | |
| AGCGATGGCACGACCCTTAA+TGG | + | chr6_2:31286894-31286913 | Msa0915280:CDS | 55.0% | |
| ACAGAGAGGGCCGGGAAAAA+GGG | - | chr6_2:31288224-31288243 | None:intergenic | 55.0% | |
| TACAGAGAGGGCCGGGAAAA+AGG | - | chr6_2:31288225-31288244 | None:intergenic | 55.0% | |
| GTGAGACACACCTTCTGCAC+AGG | - | chr6_2:31288279-31288298 | None:intergenic | 55.0% | |
| AACTTGTGTCGGGGACTCGA+GGG | - | chr6_2:31290277-31290296 | None:intergenic | 55.0% | |
| AGTGGGCACAACTTGTGTCG+GGG | - | chr6_2:31290286-31290305 | None:intergenic | 55.0% | |
| ! | CGGTGTTGAGGAACGTGCTT+CGG | - | chr6_2:31291283-31291302 | None:intergenic | 55.0% |
| AACTCCTTAGGGAGACGAGG+AGG | - | chr6_2:31291307-31291326 | None:intergenic | 55.0% | |
| GGGGATAGCTACCCCTCACT+TGG | + | chr6_2:31288186-31288205 | Msa0915280:intron | 60.0% | |
| !! | GGGGACTCGAGGGTATCTAG+GGG | - | chr6_2:31290267-31290286 | None:intergenic | 60.0% |
| !! | CGGGGACTCGAGGGTATCTA+GGG | - | chr6_2:31290268-31290287 | None:intergenic | 60.0% |
| !! | TCGGGGACTCGAGGGTATCT+AGG | - | chr6_2:31290269-31290288 | None:intergenic | 60.0% |
| CAACTTGTGTCGGGGACTCG+AGG | - | chr6_2:31290278-31290297 | None:intergenic | 60.0% | |
| ! | AGACGAGGAGGACGGTGTTG+AGG | - | chr6_2:31291295-31291314 | None:intergenic | 60.0% |
| CCTTAGGGAGACGAGGAGGA+CGG | - | chr6_2:31291303-31291322 | None:intergenic | 60.0% | |
| CCGTCCTCCTCGTCTCCCTA+AGG | + | chr6_2:31291300-31291319 | Msa0915280:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 31286774 | 31291686 | 31286774 | ID=Msa0915280;Name=Msa0915280 |
| chr6_2 | mRNA | 31286774 | 31291686 | 31286774 | ID=Msa0915280-mRNA-1;Parent=Msa0915280;Name=Msa0915280-mRNA-1;_AED=0.05;_eAED=0.05;_QI=109|1|1|1|1|1|2|236|182 |
| chr6_2 | exon | 31286774 | 31287195 | 31286774 | ID=Msa0915280-mRNA-1:exon:5607;Parent=Msa0915280-mRNA-1 |
| chr6_2 | exon | 31291215 | 31291686 | 31291215 | ID=Msa0915280-mRNA-1:exon:5608;Parent=Msa0915280-mRNA-1 |
| chr6_2 | five_prime_UTR | 31286774 | 31286882 | 31286774 | ID=Msa0915280-mRNA-1:five_prime_utr;Parent=Msa0915280-mRNA-1 |
| chr6_2 | CDS | 31286883 | 31287195 | 31286883 | ID=Msa0915280-mRNA-1:cds;Parent=Msa0915280-mRNA-1 |
| chr6_2 | CDS | 31291215 | 31291450 | 31291215 | ID=Msa0915280-mRNA-1:cds;Parent=Msa0915280-mRNA-1 |
| chr6_2 | three_prime_UTR | 31291451 | 31291686 | 31291451 | ID=Msa0915280-mRNA-1:three_prime_utr;Parent=Msa0915280-mRNA-1 |
| Gene Sequence |
| Protein sequence |
