Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966270 | XP_013453247.2 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 2.36e-45 | 149 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0004980 | Msa0966270 | 0.814493 | 1.498389e-51 | -8.615850e-47 |
| Msa0006880 | Msa0966270 | 0.816400 | 5.638185e-52 | -8.615850e-47 |
| Msa0008090 | Msa0966270 | 0.816571 | 5.162315e-52 | -8.615850e-47 |
| Msa0008410 | Msa0966270 | 0.807161 | 5.786866e-50 | -8.615850e-47 |
| Msa0018620 | Msa0966270 | 0.808496 | 3.009883e-50 | -8.615850e-47 |
| Msa0032260 | Msa0966270 | 0.824089 | 9.751701e-54 | -8.615850e-47 |
| Msa0047980 | Msa0966270 | 0.801915 | 7.186990e-49 | -8.615850e-47 |
| Msa0048180 | Msa0966270 | 0.805779 | 1.132009e-49 | -8.615850e-47 |
| Msa0053240 | Msa0966270 | 0.818407 | 1.991936e-52 | -8.615850e-47 |
| Msa0053570 | Msa0966270 | 0.853034 | 3.119752e-61 | -8.615850e-47 |
| Msa0055150 | Msa0966270 | 0.804570 | 2.027441e-49 | -8.615850e-47 |
| Msa0061970 | Msa0966270 | 0.803060 | 4.174277e-49 | -8.615850e-47 |
| Msa0064350 | Msa0966270 | 0.827452 | 1.552500e-54 | -8.615850e-47 |
| Msa0073670 | Msa0966270 | 0.832407 | 9.623767e-56 | -8.615850e-47 |
| Msa0074320 | Msa0966270 | 0.811425 | 7.046251e-51 | -8.615850e-47 |
| Msa0076000 | Msa0966270 | 0.828846 | 7.162492e-55 | -8.615850e-47 |
| Msa0076040 | Msa0966270 | 0.822652 | 2.112569e-53 | -8.615850e-47 |
| Msa0082280 | Msa0966270 | 0.869246 | 3.575691e-66 | -8.615850e-47 |
| Msa0094950 | Msa0966270 | 0.829754 | 4.311696e-55 | -8.615850e-47 |
| Msa0098740 | Msa0966270 | 0.835221 | 1.904164e-56 | -8.615850e-47 |
| Msa0099190 | Msa0966270 | 0.855006 | 8.424121e-62 | -8.615850e-47 |
| Msa0602920 | Msa0966270 | 0.828525 | 8.565886e-55 | -8.615850e-47 |
| Msa0603570 | Msa0966270 | 0.801920 | 7.169883e-49 | -8.615850e-47 |
| Msa0610390 | Msa0966270 | 0.815592 | 8.541834e-52 | -8.615850e-47 |
| Msa0618310 | Msa0966270 | 0.812322 | 4.493092e-51 | -8.615850e-47 |
| Msa0620990 | Msa0966270 | 0.806753 | 7.059052e-50 | -8.615850e-47 |
| Msa0622960 | Msa0966270 | 0.806605 | 7.586162e-50 | -8.615850e-47 |
| Msa0623700 | Msa0966270 | 0.818570 | 1.829446e-52 | -8.615850e-47 |
| Msa0631250 | Msa0966270 | 0.825116 | 5.587257e-54 | -8.615850e-47 |
| Msa0647490 | Msa0966270 | 0.827743 | 1.321865e-54 | -8.615850e-47 |
| Msa0650920 | Msa0966270 | 0.814655 | 1.379207e-51 | -8.615850e-47 |
| Msa0654870 | Msa0966270 | 0.803867 | 2.839514e-49 | -8.615850e-47 |
| Msa0657790 | Msa0966270 | 0.810897 | 9.173106e-51 | -8.615850e-47 |
| Msa0659030 | Msa0966270 | 0.841778 | 3.865092e-58 | -8.615850e-47 |
| Msa0661300 | Msa0966270 | 0.807259 | 5.515438e-50 | -8.615850e-47 |
| Msa0663900 | Msa0966270 | 0.818244 | 2.169073e-52 | -8.615850e-47 |
| Msa0666230 | Msa0966270 | 0.807289 | 5.435363e-50 | -8.615850e-47 |
| Msa0680240 | Msa0966270 | 0.810065 | 1.387150e-50 | -8.615850e-47 |
| Msa0682780 | Msa0966270 | 0.805606 | 1.230713e-49 | -8.615850e-47 |
| Msa0683780 | Msa0966270 | 0.840073 | 1.083033e-57 | -8.615850e-47 |
| Msa0687630 | Msa0966270 | 0.899033 | 2.956379e-77 | -8.615850e-47 |
| Msa0689500 | Msa0966270 | 0.805489 | 1.302117e-49 | -8.615850e-47 |
| Msa0690160 | Msa0966270 | 0.826420 | 2.739118e-54 | -8.615850e-47 |
| Msa0692080 | Msa0966270 | 0.800525 | 1.383538e-48 | -8.615850e-47 |
| Msa0692840 | Msa0966270 | 0.808837 | 2.545054e-50 | -8.615850e-47 |
| Msa0692940 | Msa0966270 | 0.814764 | 1.304694e-51 | -8.615850e-47 |
| Msa0703230 | Msa0966270 | 0.866684 | 2.380799e-65 | -8.615850e-47 |
| Msa0704660 | Msa0966270 | 0.821996 | 2.999786e-53 | -8.615850e-47 |
| Msa0705000 | Msa0966270 | 0.847552 | 1.076224e-59 | -8.615850e-47 |
| Msa0705040 | Msa0966270 | 0.852548 | 4.295307e-61 | -8.615850e-47 |
| Msa0707390 | Msa0966270 | 0.824572 | 7.508177e-54 | -8.615850e-47 |
| Msa0707770 | Msa0966270 | 0.820891 | 5.397292e-53 | -8.615850e-47 |
| Msa0709780 | Msa0966270 | 0.815569 | 8.644709e-52 | -8.615850e-47 |
| Msa0718740 | Msa0966270 | 0.817063 | 4.004016e-52 | -8.615850e-47 |
| Msa0747700 | Msa0966270 | 0.817975 | 2.494724e-52 | -8.615850e-47 |
| Msa0750920 | Msa0966270 | 0.823194 | 1.579647e-53 | -8.615850e-47 |
| Msa0751480 | Msa0966270 | 0.816818 | 4.544661e-52 | -8.615850e-47 |
| Msa0752510 | Msa0966270 | 0.804662 | 1.939833e-49 | -8.615850e-47 |
| Msa0755340 | Msa0966270 | 0.801464 | 8.893343e-49 | -8.615850e-47 |
| Msa0785130 | Msa0966270 | 0.815646 | 8.310748e-52 | -8.615850e-47 |
| Msa0797750 | Msa0966270 | 0.840538 | 8.188675e-58 | -8.615850e-47 |
| Msa0806920 | Msa0966270 | 0.825573 | 4.355286e-54 | -8.615850e-47 |
| Msa0808800 | Msa0966270 | 0.818914 | 1.528478e-52 | -8.615850e-47 |
| Msa0823090 | Msa0966270 | 0.808180 | 3.515824e-50 | -8.615850e-47 |
| Msa0824640 | Msa0966270 | 0.862373 | 5.308019e-64 | -8.615850e-47 |
| Msa0830880 | Msa0966270 | 0.802892 | 4.520676e-49 | -8.615850e-47 |
| Msa0121590 | Msa0966270 | 0.816937 | 4.273112e-52 | -8.615850e-47 |
| Msa0121820 | Msa0966270 | 0.806668 | 7.354923e-50 | -8.615850e-47 |
| Msa0125540 | Msa0966270 | 0.810052 | 1.395843e-50 | -8.615850e-47 |
| Msa0127310 | Msa0966270 | 0.800685 | 1.283268e-48 | -8.615850e-47 |
| Msa0128860 | Msa0966270 | 0.806096 | 9.712431e-50 | -8.615850e-47 |
| Msa0138920 | Msa0966270 | 0.800997 | 1.108339e-48 | -8.615850e-47 |
| Msa0142330 | Msa0966270 | 0.805670 | 1.193604e-49 | -8.615850e-47 |
| Msa0143430 | Msa0966270 | 0.804382 | 2.218566e-49 | -8.615850e-47 |
| Msa0149390 | Msa0966270 | 0.818697 | 1.711825e-52 | -8.615850e-47 |
| Msa0155430 | Msa0966270 | 0.826378 | 2.804220e-54 | -8.615850e-47 |
| Msa0166750 | Msa0966270 | 0.827308 | 1.680552e-54 | -8.615850e-47 |
| Msa0167480 | Msa0966270 | 0.811319 | 7.428203e-51 | -8.615850e-47 |
| Msa0174730 | Msa0966270 | 0.804991 | 1.656122e-49 | -8.615850e-47 |
| Msa0174770 | Msa0966270 | 0.872470 | 3.103217e-67 | -8.615850e-47 |
| Msa0180020 | Msa0966270 | 0.812089 | 5.051068e-51 | -8.615850e-47 |
| Msa0181610 | Msa0966270 | 0.843495 | 1.353219e-58 | -8.615850e-47 |
| Msa0183460 | Msa0966270 | 0.801134 | 1.038979e-48 | -8.615850e-47 |
| Msa0185400 | Msa0966270 | 0.804772 | 1.840285e-49 | -8.615850e-47 |
| Msa0186890 | Msa0966270 | 0.865086 | 7.618394e-65 | -8.615850e-47 |
| Msa0187690 | Msa0966270 | 0.814405 | 1.566998e-51 | -8.615850e-47 |
| Msa0187930 | Msa0966270 | 0.822086 | 2.859597e-53 | -8.615850e-47 |
| Msa0194540 | Msa0966270 | 0.828376 | 9.307519e-55 | -8.615850e-47 |
| Msa0199690 | Msa0966270 | 0.824813 | 6.586253e-54 | -8.615850e-47 |
| Msa0199880 | Msa0966270 | 0.803683 | 3.100632e-49 | -8.615850e-47 |
| Msa0230550 | Msa0966270 | -0.805180 | 1.512051e-49 | -8.615850e-47 |
| Msa0369450 | Msa0966270 | 0.807544 | 4.800282e-50 | -8.615850e-47 |
| Msa0376690 | Msa0966270 | 0.838264 | 3.188007e-57 | -8.615850e-47 |
| Msa0376820 | Msa0966270 | 0.811517 | 6.728883e-51 | -8.615850e-47 |
| Msa0390030 | Msa0966270 | 0.801168 | 1.022472e-48 | -8.615850e-47 |
| Msa0394400 | Msa0966270 | 0.819849 | 9.355474e-53 | -8.615850e-47 |
| Msa0402330 | Msa0966270 | 0.826922 | 2.079637e-54 | -8.615850e-47 |
| Msa0408240 | Msa0966270 | -0.809128 | 2.205074e-50 | -8.615850e-47 |
| Msa0413450 | Msa0966270 | 0.811545 | 6.634785e-51 | -8.615850e-47 |
| Msa0416400 | Msa0966270 | 0.852099 | 5.762790e-61 | -8.615850e-47 |
| Msa0423750 | Msa0966270 | 0.810554 | 1.088179e-50 | -8.615850e-47 |
| Msa0427150 | Msa0966270 | 0.824342 | 8.500986e-54 | -8.615850e-47 |
| Msa0434920 | Msa0966270 | 0.800425 | 1.449890e-48 | -8.615850e-47 |
| Msa0437690 | Msa0966270 | -0.810231 | 1.277298e-50 | -8.615850e-47 |
| Msa0443390 | Msa0966270 | 0.829237 | 5.761256e-55 | -8.615850e-47 |
| Msa0458060 | Msa0966270 | 0.803831 | 2.889591e-49 | -8.615850e-47 |
| Msa0471590 | Msa0966270 | 0.845206 | 4.691465e-59 | -8.615850e-47 |
| Msa0472130 | Msa0966270 | 0.817073 | 3.984527e-52 | -8.615850e-47 |
| Msa0481480 | Msa0966270 | 0.830420 | 2.965931e-55 | -8.615850e-47 |
| Msa0244780 | Msa0966270 | 0.817876 | 2.626888e-52 | -8.615850e-47 |
| Msa0260240 | Msa0966270 | 0.829434 | 5.158342e-55 | -8.615850e-47 |
| Msa0260280 | Msa0966270 | 0.829918 | 3.933969e-55 | -8.615850e-47 |
| Msa0264570 | Msa0966270 | 0.811558 | 6.594540e-51 | -8.615850e-47 |
| Msa0267970 | Msa0966270 | 0.836472 | 9.172441e-57 | -8.615850e-47 |
| Msa0268130 | Msa0966270 | 0.826503 | 2.617708e-54 | -8.615850e-47 |
| Msa0280430 | Msa0966270 | 0.821942 | 3.087697e-53 | -8.615850e-47 |
| Msa0291520 | Msa0966270 | 0.819220 | 1.302079e-52 | -8.615850e-47 |
| Msa0298990 | Msa0966270 | 0.817327 | 3.493362e-52 | -8.615850e-47 |
| Msa0304260 | Msa0966270 | 0.829197 | 5.888288e-55 | -8.615850e-47 |
| Msa0304300 | Msa0966270 | 0.817762 | 2.787659e-52 | -8.615850e-47 |
| Msa0304590 | Msa0966270 | 0.841811 | 3.788919e-58 | -8.615850e-47 |
| Msa0304660 | Msa0966270 | 0.832250 | 1.052000e-55 | -8.615850e-47 |
| Msa0322890 | Msa0966270 | 0.814563 | 1.445878e-51 | -8.615850e-47 |
| Msa0331700 | Msa0966270 | 0.835999 | 1.210127e-56 | -8.615850e-47 |
| Msa0348830 | Msa0966270 | 0.821740 | 3.437751e-53 | -8.615850e-47 |
| Msa0355270 | Msa0966270 | 0.832599 | 8.621502e-56 | -8.615850e-47 |
| Msa0363620 | Msa0966270 | 0.835505 | 1.613950e-56 | -8.615850e-47 |
| Msa0484290 | Msa0966270 | 0.835184 | 1.945450e-56 | -8.615850e-47 |
| Msa0505150 | Msa0966270 | 0.800166 | 1.637353e-48 | -8.615850e-47 |
| Msa0508590 | Msa0966270 | 0.816821 | 4.538751e-52 | -8.615850e-47 |
| Msa0508630 | Msa0966270 | 0.831342 | 1.762223e-55 | -8.615850e-47 |
| Msa0509950 | Msa0966270 | -0.806857 | 6.709099e-50 | -8.615850e-47 |
| Msa0526540 | Msa0966270 | 0.820301 | 7.374860e-53 | -8.615850e-47 |
| Msa0534750 | Msa0966270 | 0.804133 | 2.500330e-49 | -8.615850e-47 |
| Msa0541860 | Msa0966270 | 0.863520 | 2.347691e-64 | -8.615850e-47 |
| Msa0547940 | Msa0966270 | 0.819440 | 1.159889e-52 | -8.615850e-47 |
| Msa0552810 | Msa0966270 | 0.871219 | 8.074028e-67 | -8.615850e-47 |
| Msa0576940 | Msa0966270 | 0.821595 | 3.713302e-53 | -8.615850e-47 |
| Msa0581070 | Msa0966270 | 0.878167 | 3.496574e-69 | -8.615850e-47 |
| Msa0864010 | Msa0966270 | 0.861606 | 9.113836e-64 | -8.615850e-47 |
| Msa0881270 | Msa0966270 | 0.800828 | 1.199902e-48 | -8.615850e-47 |
| Msa0915280 | Msa0966270 | 0.819473 | 1.140117e-52 | -8.615850e-47 |
| Msa0943170 | Msa0966270 | 0.829200 | 5.880009e-55 | -8.615850e-47 |
| Msa0953150 | Msa0966270 | 0.828437 | 8.996185e-55 | -8.615850e-47 |
| Msa0963020 | Msa0966270 | 0.815169 | 1.060772e-51 | -8.615850e-47 |
| Msa0966270 | Msa0970520 | 0.839266 | 1.756534e-57 | -8.615850e-47 |
| Msa0966270 | Msa0994290 | 0.811228 | 7.773930e-51 | -8.615850e-47 |
| Msa0966270 | Msa1019240 | 0.834082 | 3.682007e-56 | -8.615850e-47 |
| Msa0966270 | Msa1019260 | 0.840067 | 1.087137e-57 | -8.615850e-47 |
| Msa0966270 | Msa1025940 | 0.828146 | 1.057408e-54 | -8.615850e-47 |
| Msa0966270 | Msa1073400 | 0.800900 | 1.160074e-48 | -8.615850e-47 |
| Msa0966270 | Msa1081150 | 0.852972 | 3.249600e-61 | -8.615850e-47 |
| Msa0966270 | Msa1082700 | 0.838511 | 2.753363e-57 | -8.615850e-47 |
| Msa0966270 | Msa1085470 | 0.846049 | 2.772707e-59 | -8.615850e-47 |
| Msa0966270 | Msa1089840 | 0.806299 | 8.798657e-50 | -8.615850e-47 |
| Msa0966270 | Msa1104140 | 0.811303 | 7.489229e-51 | -8.615850e-47 |
| Msa0966270 | Msa1104210 | 0.827286 | 1.701703e-54 | -8.615850e-47 |
| Msa0966270 | Msa1116060 | 0.813925 | 1.999378e-51 | -8.615850e-47 |
| Msa0966270 | Msa1124070 | 0.809278 | 2.047375e-50 | -8.615850e-47 |
| Msa0966270 | Msa1125500 | 0.800543 | 1.371793e-48 | -8.615850e-47 |
| Msa0966270 | Msa1126510 | 0.853335 | 2.558671e-61 | -8.615850e-47 |
| Msa0966270 | Msa1126770 | 0.890318 | 1.098061e-73 | -8.615850e-47 |
| Msa0966270 | Msa1127890 | 0.833477 | 5.215629e-56 | -8.615850e-47 |
| Msa0966270 | Msa1131560 | 0.816590 | 5.112249e-52 | -8.615850e-47 |
| Msa0966270 | Msa1162480 | 0.816535 | 5.260487e-52 | -8.615850e-47 |
| Msa0966270 | Msa1165870 | 0.846418 | 2.198956e-59 | -8.615850e-47 |
| Msa0966270 | Msa1166010 | 0.815415 | 9.352915e-52 | -8.615850e-47 |
| Msa0966270 | Msa1166330 | 0.809034 | 2.310222e-50 | -8.615850e-47 |
| Msa0966270 | Msa1166340 | 0.814439 | 1.539701e-51 | -8.615850e-47 |
| Msa0966270 | Msa1166860 | 0.852789 | 3.665320e-61 | -8.615850e-47 |
| Msa0966270 | Msa1166870 | 0.833331 | 5.671462e-56 | -8.615850e-47 |
| Msa0966270 | Msa1174100 | 0.800781 | 1.227009e-48 | -8.615850e-47 |
| Msa0966270 | Msa1174530 | 0.804595 | 2.003057e-49 | -8.615850e-47 |
| Msa0966270 | Msa1179950 | 0.822659 | 2.104201e-53 | -8.615850e-47 |
| Msa0966270 | Msa1179980 | 0.822761 | 1.992263e-53 | -8.615850e-47 |
| Msa0966270 | Msa1182610 | 0.833177 | 6.193274e-56 | -8.615850e-47 |
| Msa0966270 | Msa1184370 | 0.906091 | 2.148536e-80 | -8.615850e-47 |
| Msa0966270 | Msa1201830 | 0.827887 | 1.220793e-54 | -8.615850e-47 |
| Msa0966270 | Msa1210810 | 0.845140 | 4.890495e-59 | -8.615850e-47 |
| Msa0966270 | Msa1225660 | 0.807626 | 4.612033e-50 | -8.615850e-47 |
| Msa0966270 | Msa1227690 | 0.902031 | 1.468753e-78 | -8.615850e-47 |
| Msa0966270 | Msa1234680 | 0.819402 | 1.183650e-52 | -8.615850e-47 |
| Msa0966270 | Msa1234980 | 0.851875 | 6.672580e-61 | -8.615850e-47 |
| Msa0966270 | Msa1235250 | 0.817629 | 2.985864e-52 | -8.615850e-47 |
| Msa0966270 | Msa1254710 | 0.840508 | 8.335459e-58 | -8.615850e-47 |
| Msa0966270 | Msa1257510 | 0.823395 | 1.417569e-53 | -8.615850e-47 |
| Msa0966270 | Msa1269300 | 0.806374 | 8.487034e-50 | -8.615850e-47 |
| Msa0966270 | Msa1270620 | 0.824037 | 1.002452e-53 | -8.615850e-47 |
| Msa0966270 | Msa1270690 | 0.825521 | 4.479726e-54 | -8.615850e-47 |
| Msa0966270 | Msa1272460 | 0.810265 | 1.255910e-50 | -8.615850e-47 |
| Msa0966270 | Msa1276930 | 0.845400 | 4.157935e-59 | -8.615850e-47 |
| Msa0966270 | Msa1281190 | 0.832992 | 6.886361e-56 | -8.615850e-47 |
| Msa0966270 | Msa1292830 | 0.809847 | 1.545316e-50 | -8.615850e-47 |
| Msa0966270 | Msa1294840 | 0.839263 | 1.758920e-57 | -8.615850e-47 |
| Msa0966270 | Msa1299040 | 0.829545 | 4.848135e-55 | -8.615850e-47 |
| Msa0966270 | Msa1304820 | 0.817221 | 3.689484e-52 | -8.615850e-47 |
| Msa0966270 | Msa1306990 | 0.829612 | 4.670279e-55 | -8.615850e-47 |
| Msa0966270 | Msa1307950 | 0.879013 | 1.761912e-69 | -8.615850e-47 |
| Msa0966270 | Msa1310690 | 0.856436 | 3.222018e-62 | -8.615850e-47 |
| Msa0966270 | Msa1315100 | 0.825493 | 4.550231e-54 | -8.615850e-47 |
| Msa0966270 | Msa1316780 | 0.821681 | 3.547348e-53 | -8.615850e-47 |
| Msa0966270 | Msa1316830 | 0.825380 | 4.838431e-54 | -8.615850e-47 |
| Msa0966270 | Msa1329540 | 0.804652 | 1.949249e-49 | -8.615850e-47 |
| Msa0966270 | Msa1333560 | 0.808990 | 2.360578e-50 | -8.615850e-47 |
| Msa0966270 | Msa1335940 | 0.824266 | 8.861207e-54 | -8.615850e-47 |
| Msa0966270 | Msa1343290 | 0.830779 | 2.422661e-55 | -8.615850e-47 |
| Msa0966270 | Msa1344850 | 0.822746 | 2.009085e-53 | -8.615850e-47 |
| Msa0966270 | Msa1345450 | 0.844443 | 7.535206e-59 | -8.615850e-47 |
| Msa0966270 | Msa1363330 | 0.815098 | 1.100225e-51 | -8.615850e-47 |
| Msa0966270 | Msa1363860 | 0.845456 | 4.016263e-59 | -8.615850e-47 |
| Msa0966270 | Msa1364910 | 0.816110 | 6.545851e-52 | -8.615850e-47 |
| Msa0966270 | Msa1365150 | 0.840800 | 6.990697e-58 | -8.615850e-47 |
| Msa0966270 | Msa1367880 | 0.831241 | 1.866629e-55 | -8.615850e-47 |
| Msa0966270 | Msa1369190 | 0.840851 | 6.777259e-58 | -8.615850e-47 |
| Msa0966270 | Msa1370860 | 0.878265 | 3.230671e-69 | -8.615850e-47 |
| Msa0966270 | Msa1373330 | 0.819223 | 1.300361e-52 | -8.615850e-47 |
| Msa0966270 | Msa1379760 | 0.815245 | 1.020353e-51 | -8.615850e-47 |
| Msa0966270 | Msa1385070 | 0.823911 | 1.073234e-53 | -8.615850e-47 |
| Msa0966270 | Msa1386600 | 0.815156 | 1.068111e-51 | -8.615850e-47 |
| Msa0966270 | Msa1387420 | 0.804585 | 2.012776e-49 | -8.615850e-47 |
| Msa0966270 | Msa1389680 | 0.835072 | 2.076006e-56 | -8.615850e-47 |
| Msa0966270 | Msa1397810 | 0.820851 | 5.512791e-53 | -8.615850e-47 |
| Msa0966270 | Msa1404190 | 0.878333 | 3.057929e-69 | -8.615850e-47 |
| Msa0966270 | Msa1413180 | 0.802511 | 5.419449e-49 | -8.615850e-47 |
| Msa0966270 | Msa1413260 | 0.812322 | 4.494145e-51 | -8.615850e-47 |
| Msa0966270 | Msa1425670 | 0.818718 | 1.693891e-52 | -8.615850e-47 |
| Msa0966270 | Msa1429500 | 0.811896 | 5.565128e-51 | -8.615850e-47 |
| Msa0966270 | Msa1435750 | 0.815702 | 8.072585e-52 | -8.615850e-47 |
| Msa0966270 | Msa1438640 | 0.835827 | 1.337896e-56 | -8.615850e-47 |
| Msa0966270 | Msa1442850 | 0.894194 | 3.101315e-75 | -8.615850e-47 |
| Msa0966270 | Msa1443930 | 0.813716 | 2.223086e-51 | -8.615850e-47 |
| Msa0966270 | Msa1448690 | 0.809324 | 2.002044e-50 | -8.615850e-47 |
| Msa0966270 | Msa1450280 | 0.830602 | 2.677729e-55 | -8.615850e-47 |
| Msa0966270 | Msa1456050 | 0.804226 | 2.391111e-49 | -8.615850e-47 |
| Msa0966270 | Msa1457400 | 0.812471 | 4.170459e-51 | -8.615850e-47 |
| Msa0966270 | Msa1462860 | 0.867169 | 1.668421e-65 | -8.615850e-47 |
| Msa0966270 | Msa1465080 | 0.910959 | 1.044203e-82 | -8.615850e-47 |
| Msa0966270 | Msa1466990 | 0.817534 | 3.137566e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966270 | MtrunA17_Chr6g0488741 | 98.611 | 72 | 1 | 0 | 1 | 72 | 1 | 72 | 2.17e-49 | 149 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0966270 | AT2G31490.1 | 80.000 | 70 | 14 | 0 | 1 | 70 | 1 | 70 | 1.16e-40 | 127 |
Find 37 sgRNAs with CRISPR-Local
Find 180 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCAAAATTAATAATATATT+TGG | 0.092183 | 6_3:+94392017 | Msa0966270:three_prime_UTR |
| CGTCGCAATCTTCTTCTTGT+TGG | 0.279849 | 6_3:+94388659 | Msa0966270:CDS |
| GGTTGTTTGTTTATGTAGTT+TGG | 0.314790 | 6_3:+94391926 | Msa0966270:three_prime_UTR |
| CTTCTTCTTGTTGGTATCTT+CGG | 0.319314 | 6_3:+94388668 | Msa0966270:CDS |
| CAAAACATCTTACTTACTTA+AGG | 0.326571 | 6_3:-94391831 | None:intergenic |
| CTATCAAACCACTCCATGTT+TGG | 0.345249 | 6_3:+94391951 | Msa0966270:three_prime_UTR |
| AAACAAATACATTGAAGATT+GGG | 0.354720 | 6_3:+94388595 | Msa0966270:CDS |
| CATGGTGTAGCCTTGTATTA+AGG | 0.381547 | 6_3:-94391881 | None:intergenic |
| AAAACAAATACATTGAAGAT+TGG | 0.399828 | 6_3:+94388594 | Msa0966270:CDS |
| CATTGCTAATATGAGTAATA+CGG | 0.422131 | 6_3:-94392173 | None:intergenic |
| ATGCCTTTGTAGACGAGAAC+AGG | 0.444933 | 6_3:-94388701 | None:intergenic |
| ATCACTGCAAAGAGCATAAG+AGG | 0.466355 | 6_3:-94392132 | None:intergenic |
| AGAGGTAAATACAGTGAGTG+AGG | 0.483791 | 6_3:+94388458 | Msa0966270:five_prime_UTR |
| GAGAGAGATCTGAAGGAAGA+AGG | 0.485933 | 6_3:+94388510 | Msa0966270:five_prime_UTR |
| TATATTAGATTGTATTTGCT+AGG | 0.487899 | 6_3:+94392066 | Msa0966270:three_prime_UTR |
| TAAGGCTTGAACTTCCTGTA+TGG | 0.491957 | 6_3:-94391813 | None:intergenic |
| CATAAACAAACAACCCTTGG+TGG | 0.495242 | 6_3:-94391918 | None:intergenic |
| ATCTGAAGGAAGAAGGAAGA+AGG | 0.499660 | 6_3:+94388517 | Msa0966270:five_prime_UTR |
| AAGACAATGGCCGACCATAC+AGG | 0.509897 | 6_3:+94391799 | Msa0966270:CDS |
| TCATCATCATCATCGAAAAT+GGG | 0.510380 | 6_3:+94388551 | Msa0966270:exon |
| CTACATAAACAAACAACCCT+TGG | 0.515082 | 6_3:-94391921 | None:intergenic |
| ATCGAAAATGGGTGGAGGAA+TGG | 0.519119 | 6_3:+94388562 | Msa0966270:exon |
| TTTGCTAGGTGAAAAGCTAA+TGG | 0.521752 | 6_3:+94392080 | Msa0966270:three_prime_UTR |
| TGGTTGCAATTTAAAATCAC+AGG | 0.525572 | 6_3:-94391991 | None:intergenic |
| ATCTCGAACACAATTTCCGT+TGG | 0.545751 | 6_3:+94388633 | Msa0966270:CDS |
| GAAAATTAGACCTTAATACA+AGG | 0.558400 | 6_3:+94391871 | Msa0966270:three_prime_UTR |
| GAAGATTGCGACGAGACCAA+CGG | 0.577698 | 6_3:-94388649 | None:intergenic |
| ATAAACAAACAACCCTTGGT+GGG | 0.584072 | 6_3:-94391917 | None:intergenic |
| GCTTGAACTTCCTGTATGGT+CGG | 0.587228 | 6_3:-94391809 | None:intergenic |
| TCATCATCGAAAATGGGTGG+AGG | 0.588259 | 6_3:+94388557 | Msa0966270:exon |
| AACAAATACATTGAAGATTG+GGG | 0.598822 | 6_3:+94388596 | Msa0966270:CDS |
| GTTCCTGTTCTCGTCTACAA+AGG | 0.608218 | 6_3:+94388698 | Msa0966270:CDS |
| TCAACGAAGACAGCCAAACA+TGG | 0.619632 | 6_3:-94391964 | None:intergenic |
| TCATCATCATCGAAAATGGG+TGG | 0.630058 | 6_3:+94388554 | Msa0966270:exon |
| GAAGACAGCCAAACATGGAG+TGG | 0.664579 | 6_3:-94391959 | None:intergenic |
| ACTGCAAAGAGCATAAGAGG+TGG | 0.724683 | 6_3:-94392129 | None:intergenic |
| CATATGCAAGATGAAGACAA+TGG | 0.724975 | 6_3:+94391786 | Msa0966270:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTGATTAAAGTTGAATTTTT+TGG | + | chr6_3:94388873-94388892 | Msa0966270:intron | 15.0% |
| !!! | TGATTAAAGTTGAATTTTTT+GGG | + | chr6_3:94388874-94388893 | Msa0966270:intron | 15.0% |
| !!! | AACTTATTTTCAATTGTTTT+GGG | + | chr6_3:94389012-94389031 | Msa0966270:intron | 15.0% |
| !!! | TGTTTTATTATAAGCTATTT+TGG | + | chr6_3:94389844-94389863 | Msa0966270:intron | 15.0% |
| !! | TCAATTTATTATAGATAACA+AGG | - | chr6_3:94391285-94391304 | None:intergenic | 15.0% |
| !!! | ATATTATTAATTTTGAACCA+TGG | - | chr6_3:94392014-94392033 | None:intergenic | 15.0% |
| !! | AAAACAAATACATTGAAGAT+TGG | + | chr6_3:94388594-94388613 | Msa0966270:CDS | 20.0% |
| !! | AAACAAATACATTGAAGATT+GGG | + | chr6_3:94388595-94388614 | Msa0966270:CDS | 20.0% |
| !! | ATTTCTGAATAGTTCAATTT+AGG | + | chr6_3:94388783-94388802 | Msa0966270:intron | 20.0% |
| !!! | CAACTTATTTTCAATTGTTT+TGG | + | chr6_3:94389011-94389030 | Msa0966270:intron | 20.0% |
| !! | AAAAAATAAGTCAATCCAAA+AGG | - | chr6_3:94389039-94389058 | None:intergenic | 20.0% |
| !! | GAAAAATTGTGTTTATCTAA+GGG | - | chr6_3:94389219-94389238 | None:intergenic | 20.0% |
| !! | TGAAAAATTGTGTTTATCTA+AGG | - | chr6_3:94389220-94389239 | None:intergenic | 20.0% |
| !!! | AACACATTTTAGCATTATTT+TGG | + | chr6_3:94389271-94389290 | Msa0966270:intron | 20.0% |
| !!! | ACACATTTTAGCATTATTTT+GGG | + | chr6_3:94389272-94389291 | Msa0966270:intron | 20.0% |
| !! | TTATTAACAACTCAGAATTT+AGG | + | chr6_3:94389461-94389480 | Msa0966270:intron | 20.0% |
| !! | TATTAACAACTCAGAATTTA+GGG | + | chr6_3:94389462-94389481 | Msa0966270:intron | 20.0% |
| !!! | CAATTTTTACAAGCTTTTTT+CGG | - | chr6_3:94389888-94389907 | None:intergenic | 20.0% |
| !! | AAATCATATCATCATGTATT+AGG | - | chr6_3:94390471-94390490 | None:intergenic | 20.0% |
| !!! | TTCCTAGTTTTGTTAAATAA+TGG | + | chr6_3:94390748-94390767 | Msa0966270:intron | 20.0% |
| !! | AATAAGTTGTATATCAAAAC+AGG | + | chr6_3:94391115-94391134 | Msa0966270:intron | 20.0% |
| !! | ATAAGTTGTATATCAAAACA+GGG | + | chr6_3:94391116-94391135 | Msa0966270:intron | 20.0% |
| !!! | GATACTGATTTATTTTTTAC+TGG | + | chr6_3:94391325-94391344 | Msa0966270:intron | 20.0% |
| !! | AATTGTTAAATGATGTGATA+TGG | + | chr6_3:94391673-94391692 | Msa0966270:intron | 20.0% |
| !! | TATATTAGATTGTATTTGCT+AGG | + | chr6_3:94392066-94392085 | Msa0966270:three_prime_UTR | 20.0% |
| ! | AACAAATACATTGAAGATTG+GGG | + | chr6_3:94388596-94388615 | Msa0966270:CDS | 25.0% |
| ! | TAGTTCAATTTAGGAATTTG+AGG | + | chr6_3:94388792-94388811 | Msa0966270:intron | 25.0% |
| ! | AGTTCAATTTAGGAATTTGA+GGG | + | chr6_3:94388793-94388812 | Msa0966270:intron | 25.0% |
| !!! | AAAGTTTCTTACTTTTTCTG+TGG | + | chr6_3:94388839-94388858 | Msa0966270:intron | 25.0% |
| !!! | AAGTTTCTTACTTTTTCTGT+GGG | + | chr6_3:94388840-94388859 | Msa0966270:intron | 25.0% |
| !!! | AGTTGAATTTTTTGGGAATA+TGG | + | chr6_3:94388881-94388900 | Msa0966270:intron | 25.0% |
| !!! | GTTGAATTTTTTGGGAATAT+GGG | + | chr6_3:94388882-94388901 | Msa0966270:intron | 25.0% |
| ! | GAGTTATTTGAGCTTATATA+TGG | + | chr6_3:94388917-94388936 | Msa0966270:intron | 25.0% |
| ! | TGATTATTTCAATCTACCAT+TGG | + | chr6_3:94389433-94389452 | Msa0966270:intron | 25.0% |
| ! | GTTGTTAATAAATTGACCAA+TGG | - | chr6_3:94389452-94389471 | None:intergenic | 25.0% |
| ! | CAGAATTTAGGGATTTAATT+AGG | + | chr6_3:94389473-94389492 | Msa0966270:intron | 25.0% |
| ! | ACAACAGTTCAAAAGAATTT+AGG | + | chr6_3:94389518-94389537 | Msa0966270:intron | 25.0% |
| ! | CAACAGTTCAAAAGAATTTA+GGG | + | chr6_3:94389519-94389538 | Msa0966270:intron | 25.0% |
| ! | AACAGTTCAAAAGAATTTAG+GGG | + | chr6_3:94389520-94389539 | Msa0966270:intron | 25.0% |
| !!! | AAGAATTTAGGGGTTTTATT+AGG | + | chr6_3:94389530-94389549 | Msa0966270:intron | 25.0% |
| ! | CAATCTAAACAAATTGAGTA+TGG | + | chr6_3:94390231-94390250 | Msa0966270:intron | 25.0% |
| ! | TAAATGCTTGCTTGAATTAT+TGG | + | chr6_3:94390282-94390301 | Msa0966270:intron | 25.0% |
| ! | TGGTTGTAATGTTTAAATTG+TGG | + | chr6_3:94390302-94390321 | Msa0966270:intron | 25.0% |
| ! | TTAATGCTTGCTTGAATTAT+TGG | + | chr6_3:94390339-94390358 | Msa0966270:intron | 25.0% |
| ! | AGGAACTAAATAGCATATAA+CGG | - | chr6_3:94390733-94390752 | None:intergenic | 25.0% |
| ! | AGCCATTATTTAACAAAACT+AGG | - | chr6_3:94390753-94390772 | None:intergenic | 25.0% |
| !! | CAATTTTAAACCTAACCAAA+AGG | - | chr6_3:94390903-94390922 | None:intergenic | 25.0% |
| !!! | CTTTTGGTTAGGTTTAAAAT+TGG | + | chr6_3:94390901-94390920 | Msa0966270:intron | 25.0% |
| ! | TCAAATAAGCTAATACAAAC+AGG | + | chr6_3:94391017-94391036 | Msa0966270:intron | 25.0% |
| !! | AAGTTTAAGATGTTGAATCA+TGG | + | chr6_3:94391241-94391260 | Msa0966270:intron | 25.0% |
| ! | ATTATAGATAACAAGGTTTG+TGG | - | chr6_3:94391278-94391297 | None:intergenic | 25.0% |
| ! | ATAAATCAGTATCATGTATG+AGG | - | chr6_3:94391318-94391337 | None:intergenic | 25.0% |
| ! | CCAAACAATAAAATGAATCA+TGG | - | chr6_3:94391602-94391621 | None:intergenic | 25.0% |
| !! | CCATGATTCATTTTATTGTT+TGG | + | chr6_3:94391599-94391618 | Msa0966270:intron | 25.0% |
| ! | AGGTAAAAGTGAAAACAAAA+TGG | - | chr6_3:94391707-94391726 | None:intergenic | 25.0% |
| !!! | ACCTTTTTTTCATGTATGTA+TGG | + | chr6_3:94391723-94391742 | Msa0966270:intron | 25.0% |
| ! | TCCATACATACATGAAAAAA+AGG | - | chr6_3:94391727-94391746 | None:intergenic | 25.0% |
| ! | CAAAACATCTTACTTACTTA+AGG | - | chr6_3:94391834-94391853 | None:intergenic | 25.0% |
| !! | TAAGATGTTTTGTAATAAGC+CGG | + | chr6_3:94391842-94391861 | Msa0966270:three_prime_UTR | 25.0% |
| ! | GAAAATTAGACCTTAATACA+AGG | + | chr6_3:94391871-94391890 | Msa0966270:three_prime_UTR | 25.0% |
| ATCATCATCATCATCGAAAA+TGG | + | chr6_3:94388550-94388569 | Msa0966270:exon | 30.0% | |
| TCATCATCATCATCGAAAAT+GGG | + | chr6_3:94388551-94388570 | Msa0966270:exon | 30.0% | |
| AAGAGAGAAGAAGATGAAAA+TGG | - | chr6_3:94388751-94388770 | None:intergenic | 30.0% | |
| !! | ATAAGTTTTGTGAGCTTGAT+TGG | + | chr6_3:94388942-94388961 | Msa0966270:intron | 30.0% |
| GCAAATAATTAAGCTTGTCA+AGG | + | chr6_3:94389066-94389085 | Msa0966270:intron | 30.0% | |
| AAAAATAAGCCAATCCAAAC+TGG | + | chr6_3:94389193-94389212 | Msa0966270:intron | 30.0% | |
| !! | TTGTTATGAATGCATTGACT+TGG | + | chr6_3:94389681-94389700 | Msa0966270:intron | 30.0% |
| !! | ATTTTGATCAAGTCTGTGTT+TGG | + | chr6_3:94389712-94389731 | Msa0966270:intron | 30.0% |
| CTTACATAAGCTTATAGCAT+GGG | - | chr6_3:94389789-94389808 | None:intergenic | 30.0% | |
| ATCCAAACAAGTCCTAAAAT+TGG | + | chr6_3:94390168-94390187 | Msa0966270:intron | 30.0% | |
| !!! | ATCCAATTTTAGGACTTGTT+TGG | - | chr6_3:94390173-94390192 | None:intergenic | 30.0% |
| ! | AAAGCTGGAAATCCAATTTT+AGG | - | chr6_3:94390183-94390202 | None:intergenic | 30.0% |
| ! | AAAATTGGATTTCCAGCTTT+TGG | + | chr6_3:94390183-94390202 | Msa0966270:intron | 30.0% |
| ! | GAATTTAAAGTTTGCGATGT+TGG | + | chr6_3:94390380-94390399 | Msa0966270:intron | 30.0% |
| TTTCAAAGCCATAGTATGTA+AGG | - | chr6_3:94390589-94390608 | None:intergenic | 30.0% | |
| ACAAACAACAAAACCAATCA+TGG | - | chr6_3:94390871-94390890 | None:intergenic | 30.0% | |
| !! | ATAAGTTTTGTGAGACTGTT+TGG | - | chr6_3:94390983-94391002 | None:intergenic | 30.0% |
| AATAAACACAAACGTTAACC+AGG | - | chr6_3:94391142-94391161 | None:intergenic | 30.0% | |
| TACTGGATATTTGAACTACT+AGG | + | chr6_3:94391342-94391361 | Msa0966270:intron | 30.0% | |
| TTGAACGTATAATGTGTGTT+TGG | - | chr6_3:94391448-94391467 | None:intergenic | 30.0% | |
| TGGAAATTTAAGCTTCATCT+TGG | - | chr6_3:94391489-94391508 | None:intergenic | 30.0% | |
| ! | AAGATGTTTTGTAATAAGCC+GGG | + | chr6_3:94391843-94391862 | Msa0966270:three_prime_UTR | 30.0% |
| ! | GTGGGTTAAGAAAAAATACA+TGG | - | chr6_3:94391902-94391921 | None:intergenic | 30.0% |
| !!! | TATTTTTTCTTAACCCACCA+AGG | + | chr6_3:94391904-94391923 | Msa0966270:three_prime_UTR | 30.0% |
| !!! | ATTTTTTCTTAACCCACCAA+GGG | + | chr6_3:94391905-94391924 | Msa0966270:three_prime_UTR | 30.0% |
| GGTTGTTTGTTTATGTAGTT+TGG | + | chr6_3:94391926-94391945 | Msa0966270:three_prime_UTR | 30.0% | |
| ! | TGGTTGCAATTTAAAATCAC+AGG | - | chr6_3:94391994-94392013 | None:intergenic | 30.0% |
| ! | GTGATTTTAAATTGCAACCA+TGG | + | chr6_3:94391994-94392013 | Msa0966270:three_prime_UTR | 30.0% |
| CTTCTTCTTGTTGGTATCTT+CGG | + | chr6_3:94388668-94388687 | Msa0966270:CDS | 35.0% | |
| GAAGAAGATGAAAATGGAAG+TGG | - | chr6_3:94388745-94388764 | None:intergenic | 35.0% | |
| TCAATTTAGGAATTTGAGGG+AGG | + | chr6_3:94388796-94388815 | Msa0966270:intron | 35.0% | |
| !!! | TCAATTGTTTTGGGACCTTT+TGG | + | chr6_3:94389021-94389040 | Msa0966270:intron | 35.0% |
| !!! | AGCATTATTTTGGGTCTGTT+AGG | + | chr6_3:94389281-94389300 | Msa0966270:intron | 35.0% |
| GCTTACATAAGCTTATAGCA+TGG | - | chr6_3:94389790-94389809 | None:intergenic | 35.0% | |
| TCAAATAAGCCAATCCAAAC+AGG | + | chr6_3:94389970-94389989 | Msa0966270:intron | 35.0% | |
| !! | TATTTTGAGCCTGTTTGGAT+TGG | - | chr6_3:94389982-94390001 | None:intergenic | 35.0% |
| !! | AACTGTATTTTGAGCCTGTT+TGG | - | chr6_3:94389987-94390006 | None:intergenic | 35.0% |
| CCAATTTACTACAGCTAACA+AGG | - | chr6_3:94390438-94390457 | None:intergenic | 35.0% | |
| CCTTGTTAGCTGTAGTAAAT+TGG | + | chr6_3:94390435-94390454 | Msa0966270:intron | 35.0% | |
| ! | GGATTCATGTTTTCTTAGCT+CGG | - | chr6_3:94390618-94390637 | None:intergenic | 35.0% |
| AGAAGGTCTAATTGCTTGTT+TGG | - | chr6_3:94390639-94390658 | None:intergenic | 35.0% | |
| ACAAGCAATTAGACCTTCTA+TGG | + | chr6_3:94390640-94390659 | Msa0966270:intron | 35.0% | |
| CAAGCAATTAGACCTTCTAT+GGG | + | chr6_3:94390641-94390660 | Msa0966270:intron | 35.0% | |
| ! | AACTTGTTCTAATTTCGCGA+GGG | - | chr6_3:94390701-94390720 | None:intergenic | 35.0% |
| !! | TAACTTGTTCTAATTTCGCG+AGG | - | chr6_3:94390702-94390721 | None:intergenic | 35.0% |
| ! | ATTGACAACCCTAGACTTTT+CGG | + | chr6_3:94390838-94390857 | Msa0966270:intron | 35.0% |
| !! | GTTTGTTGCTGAATTCCTTT+TGG | + | chr6_3:94390885-94390904 | Msa0966270:intron | 35.0% |
| !! | TTGCTGAATTCCTTTTGGTT+AGG | + | chr6_3:94390890-94390909 | Msa0966270:intron | 35.0% |
| TGAACTACTAGGTGTATGTT+TGG | + | chr6_3:94391353-94391372 | Msa0966270:intron | 35.0% | |
| TAGGTGTATGTTTGGTATCA+TGG | + | chr6_3:94391361-94391380 | Msa0966270:intron | 35.0% | |
| ! | TAGCTTTTGCAAAATCACAG+TGG | + | chr6_3:94391386-94391405 | Msa0966270:intron | 35.0% |
| ACGTATAATGTGTGTTTGGT+TGG | - | chr6_3:94391444-94391463 | None:intergenic | 35.0% | |
| GTAAGGTCTAATTGCTTGTT+TGG | - | chr6_3:94391565-94391584 | None:intergenic | 35.0% | |
| CATATGCAAGATGAAGACAA+TGG | + | chr6_3:94391786-94391805 | Msa0966270:CDS | 35.0% | |
| ! | AGATGTTTTGTAATAAGCCG+GGG | + | chr6_3:94391844-94391863 | Msa0966270:three_prime_UTR | 35.0% |
| ! | AGGTCTAATTTTCATAACCC+CGG | - | chr6_3:94391864-94391883 | None:intergenic | 35.0% |
| ATAAACAAACAACCCTTGGT+GGG | - | chr6_3:94391920-94391939 | None:intergenic | 35.0% | |
| CTACATAAACAAACAACCCT+TGG | - | chr6_3:94391924-94391943 | None:intergenic | 35.0% | |
| TTTGCTAGGTGAAAAGCTAA+TGG | + | chr6_3:94392080-94392099 | Msa0966270:three_prime_UTR | 35.0% | |
| AGAGGTAAATACAGTGAGTG+AGG | + | chr6_3:94388458-94388477 | Msa0966270:five_prime_UTR | 40.0% | |
| ATCTGAAGGAAGAAGGAAGA+AGG | + | chr6_3:94388517-94388536 | Msa0966270:five_prime_UTR | 40.0% | |
| TCATCATCATCGAAAATGGG+TGG | + | chr6_3:94388554-94388573 | Msa0966270:exon | 40.0% | |
| ATCTCGAACACAATTTCCGT+TGG | + | chr6_3:94388633-94388652 | Msa0966270:CDS | 40.0% | |
| !! | TTTGGGAATATGGGCTAGTT+TGG | + | chr6_3:94388891-94388910 | Msa0966270:intron | 40.0% |
| TGTTTATCTAAGGGCCAGTT+TGG | - | chr6_3:94389210-94389229 | None:intergenic | 40.0% | |
| TTGGGTCTGTTAGGATAAAC+AGG | + | chr6_3:94389290-94389309 | Msa0966270:intron | 40.0% | |
| TTTGCACCTTATAGCACAAG+CGG | + | chr6_3:94389748-94389767 | Msa0966270:intron | 40.0% | |
| GCTTATTTGAGCTTACCAAC+TGG | - | chr6_3:94389960-94389979 | None:intergenic | 40.0% | |
| CTACTAACATAAGCACCTGT+GGG | - | chr6_3:94390130-94390149 | None:intergenic | 40.0% | |
| TCTACTAACATAAGCACCTG+TGG | - | chr6_3:94390131-94390150 | None:intergenic | 40.0% | |
| !!! | GGATTTCCAGCTTTTGGAAT+CGG | + | chr6_3:94390189-94390208 | Msa0966270:intron | 40.0% |
| ! | CATTAACCGATTCCAAAAGC+TGG | - | chr6_3:94390198-94390217 | None:intergenic | 40.0% |
| ! | CTTCATTTTGGATGTGCGTT+TGG | - | chr6_3:94390551-94390570 | None:intergenic | 40.0% |
| ! | TGGACATTGGAGCTTCATTT+TGG | - | chr6_3:94390563-94390582 | None:intergenic | 40.0% |
| TGAGTTTGACAACCCATAGA+AGG | - | chr6_3:94390656-94390675 | None:intergenic | 40.0% | |
| GGGTTGTCAAACTCAAATAG+TGG | + | chr6_3:94390661-94390680 | Msa0966270:intron | 40.0% | |
| TTGTATATCAAAACAGGGCC+TGG | + | chr6_3:94391121-94391140 | Msa0966270:intron | 40.0% | |
| ! | TGTGTGTTTGGTTGGTATCA+CGG | - | chr6_3:94391436-94391455 | None:intergenic | 40.0% |
| TTTGTAACATGAGCCAAGCT+AGG | + | chr6_3:94391528-94391547 | Msa0966270:intron | 40.0% | |
| ! | GGATTCTCATTTTCCTAGCT+TGG | - | chr6_3:94391544-94391563 | None:intergenic | 40.0% |
| TAAGGCTTGAACTTCCTGTA+TGG | - | chr6_3:94391816-94391835 | None:intergenic | 40.0% | |
| !! | CATGGTGTAGCCTTGTATTA+AGG | - | chr6_3:94391884-94391903 | None:intergenic | 40.0% |
| CATAAACAAACAACCCTTGG+TGG | - | chr6_3:94391921-94391940 | None:intergenic | 40.0% | |
| CTATCAAACCACTCCATGTT+TGG | + | chr6_3:94391951-94391970 | Msa0966270:three_prime_UTR | 40.0% | |
| ! | ATCACTGCAAAGAGCATAAG+AGG | - | chr6_3:94392135-94392154 | None:intergenic | 40.0% |
| AGAGAGAGAGAGAGATCTGA+AGG | + | chr6_3:94388503-94388522 | Msa0966270:five_prime_UTR | 45.0% | |
| GAGAGAGATCTGAAGGAAGA+AGG | + | chr6_3:94388510-94388529 | Msa0966270:five_prime_UTR | 45.0% | |
| TCATCATCGAAAATGGGTGG+AGG | + | chr6_3:94388557-94388576 | Msa0966270:exon | 45.0% | |
| ATCGAAAATGGGTGGAGGAA+TGG | + | chr6_3:94388562-94388581 | Msa0966270:exon | 45.0% | |
| CGTCGCAATCTTCTTCTTGT+TGG | + | chr6_3:94388659-94388678 | Msa0966270:CDS | 45.0% | |
| GTTCCTGTTCTCGTCTACAA+AGG | + | chr6_3:94388698-94388717 | Msa0966270:CDS | 45.0% | |
| ATGCCTTTGTAGACGAGAAC+AGG | - | chr6_3:94388704-94388723 | None:intergenic | 45.0% | |
| GGAGGTTCTACTACGTGATT+TGG | + | chr6_3:94388814-94388833 | Msa0966270:intron | 45.0% | |
| ATCTAAGGGCCAGTTTGGAT+TGG | - | chr6_3:94389205-94389224 | None:intergenic | 45.0% | |
| CTCATGACGCAACATTGTGA+TGG | - | chr6_3:94389602-94389621 | None:intergenic | 45.0% | |
| AACAAGGTCTGTAGACAGTG+CGG | - | chr6_3:94390422-94390441 | None:intergenic | 45.0% | |
| GTATGTAAGGAGCTGGACAT+TGG | - | chr6_3:94390576-94390595 | None:intergenic | 45.0% | |
| GTCCAGCTCCTTACATACTA+TGG | + | chr6_3:94390578-94390597 | Msa0966270:intron | 45.0% | |
| AGCCATAGTATGTAAGGAGC+TGG | - | chr6_3:94390583-94390602 | None:intergenic | 45.0% | |
| GTTGTAGCATTGCAACGTAG+TGG | + | chr6_3:94390781-94390800 | Msa0966270:intron | 45.0% | |
| TTGCAGACTGCGGAAAATAG+TGG | - | chr6_3:94390819-94390838 | None:intergenic | 45.0% | |
| GAGTGAGTCCGAAAAGTCTA+GGG | - | chr6_3:94390849-94390868 | None:intergenic | 45.0% | |
| TTTCGGACTCACTCCATGAT+TGG | + | chr6_3:94390855-94390874 | Msa0966270:intron | 45.0% | |
| TTCCAGCTTCTCACAAACCT+TGG | + | chr6_3:94391504-94391523 | Msa0966270:intron | 45.0% | |
| TGGCTCATGTTACAAAGCCA+AGG | - | chr6_3:94391524-94391543 | None:intergenic | 45.0% | |
| TGGAGCGACTCAAGAAAGTA+AGG | - | chr6_3:94391582-94391601 | None:intergenic | 45.0% | |
| GCTTGAACTTCCTGTATGGT+CGG | - | chr6_3:94391812-94391831 | None:intergenic | 45.0% | |
| TCAACGAAGACAGCCAAACA+TGG | - | chr6_3:94391967-94391986 | None:intergenic | 45.0% | |
| ! | ACTGCAAAGAGCATAAGAGG+TGG | - | chr6_3:94392132-94392151 | None:intergenic | 45.0% |
| !! | TTCAAAATTAATAATATATT+TGG | + | chr6_3:94392017-94392036 | Msa0966270:three_prime_UTR | 5.0% |
| GAAGATTGCGACGAGACCAA+CGG | - | chr6_3:94388652-94388671 | None:intergenic | 50.0% | |
| CGACAACCGCTTGTGCTATA+AGG | - | chr6_3:94389757-94389776 | None:intergenic | 50.0% | |
| CTCACAAGACTTGTGCCAGT+TGG | + | chr6_3:94389942-94389961 | Msa0966270:intron | 50.0% | |
| AGTTCTCCAAACAGTCCCAC+AGG | + | chr6_3:94390112-94390131 | Msa0966270:intron | 50.0% | |
| TAAGCACCTGTGGGACTGTT+TGG | - | chr6_3:94390121-94390140 | None:intergenic | 50.0% | |
| GGGTTGTCAATTGCAGACTG+CGG | - | chr6_3:94390829-94390848 | None:intergenic | 50.0% | |
| GGAGTGAGTCCGAAAAGTCT+AGG | - | chr6_3:94390850-94390869 | None:intergenic | 50.0% | |
| AGCCAAGGTTTGTGAGAAGC+TGG | - | chr6_3:94391509-94391528 | None:intergenic | 50.0% | |
| AAGACAATGGCCGACCATAC+AGG | + | chr6_3:94391799-94391818 | Msa0966270:CDS | 50.0% | |
| GAAGACAGCCAAACATGGAG+TGG | - | chr6_3:94391962-94391981 | None:intergenic | 50.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 94388451 | 94392183 | 94388451 | ID=Msa0966270;Name=Msa0966270 |
| chr6_3 | mRNA | 94388451 | 94392183 | 94388451 | ID=Msa0966270-mRNA-1;Parent=Msa0966270;Name=Msa0966270-mRNA-1;_AED=0.03;_eAED=0.03;_QI=118|1|1|1|1|1|2|347|72 |
| chr6_3 | exon | 94388451 | 94388736 | 94388451 | ID=Msa0966270-mRNA-1:exon:17428;Parent=Msa0966270-mRNA-1 |
| chr6_3 | exon | 94391786 | 94392183 | 94391786 | ID=Msa0966270-mRNA-1:exon:17429;Parent=Msa0966270-mRNA-1 |
| chr6_3 | five_prime_UTR | 94388451 | 94388568 | 94388451 | ID=Msa0966270-mRNA-1:five_prime_utr;Parent=Msa0966270-mRNA-1 |
| chr6_3 | CDS | 94388569 | 94388736 | 94388569 | ID=Msa0966270-mRNA-1:cds;Parent=Msa0966270-mRNA-1 |
| chr6_3 | CDS | 94391786 | 94391836 | 94391786 | ID=Msa0966270-mRNA-1:cds;Parent=Msa0966270-mRNA-1 |
| chr6_3 | three_prime_UTR | 94391837 | 94392183 | 94391837 | ID=Msa0966270-mRNA-1:three_prime_utr;Parent=Msa0966270-mRNA-1 |
| Gene Sequence |
| Protein sequence |
