Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0003780 | sp|Q9LHP1|RL74_ARATH | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.90e-153 | 428 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0002490 | Msa0003780 | 0.821503 | 3.901382e-53 | -8.615850e-47 |
| Msa0002750 | Msa0003780 | 0.876724 | 1.111738e-68 | -8.615850e-47 |
| Msa0002790 | Msa0003780 | 0.856131 | 3.958238e-62 | -8.615850e-47 |
| Msa0003780 | Msa0006380 | 0.814750 | 1.313855e-51 | -8.615850e-47 |
| Msa0003780 | Msa0016670 | 0.814174 | 1.762363e-51 | -8.615850e-47 |
| Msa0003780 | Msa0022970 | 0.835389 | 1.726556e-56 | -8.615850e-47 |
| Msa0003780 | Msa0025730 | 0.814228 | 1.714050e-51 | -8.615850e-47 |
| Msa0003780 | Msa0027260 | 0.866349 | 3.042926e-65 | -8.615850e-47 |
| Msa0003780 | Msa0029270 | 0.819410 | 1.178853e-52 | -8.615850e-47 |
| Msa0003780 | Msa0032090 | 0.881748 | 1.855283e-70 | -8.615850e-47 |
| Msa0003780 | Msa0032260 | 0.845029 | 5.240250e-59 | -8.615850e-47 |
| Msa0003780 | Msa0032430 | 0.865177 | 7.133048e-65 | -8.615850e-47 |
| Msa0003780 | Msa0032580 | 0.849286 | 3.564069e-60 | -8.615850e-47 |
| Msa0003780 | Msa0032920 | -0.824368 | 8.384655e-54 | -8.615850e-47 |
| Msa0003780 | Msa0032960 | -0.808714 | 2.704481e-50 | -8.615850e-47 |
| Msa0003780 | Msa0033110 | 0.820103 | 8.185652e-53 | -8.615850e-47 |
| Msa0003780 | Msa0033260 | 0.826760 | 2.272486e-54 | -8.615850e-47 |
| Msa0003780 | Msa0037250 | 0.828208 | 1.021752e-54 | -8.615850e-47 |
| Msa0003780 | Msa0040690 | 0.913273 | 7.452856e-84 | -8.615850e-47 |
| Msa0003780 | Msa0042280 | 0.851407 | 9.057309e-61 | -8.615850e-47 |
| Msa0003780 | Msa0043660 | 0.821219 | 4.535530e-53 | -8.615850e-47 |
| Msa0003780 | Msa0045730 | 0.847723 | 9.655593e-60 | -8.615850e-47 |
| Msa0003780 | Msa0047160 | 0.871925 | 4.713183e-67 | -8.615850e-47 |
| Msa0003780 | Msa0048180 | 0.860268 | 2.324725e-63 | -8.615850e-47 |
| Msa0003780 | Msa0049370 | 0.857986 | 1.122753e-62 | -8.615850e-47 |
| Msa0003780 | Msa0052610 | 0.802128 | 6.498210e-49 | -8.615850e-47 |
| Msa0003780 | Msa0055180 | 0.836517 | 8.931867e-57 | -8.615850e-47 |
| Msa0003780 | Msa0056470 | 0.843203 | 1.619171e-58 | -8.615850e-47 |
| Msa0003780 | Msa0072420 | 0.801331 | 9.471110e-49 | -8.615850e-47 |
| Msa0003780 | Msa0073480 | 0.829171 | 5.976628e-55 | -8.615850e-47 |
| Msa0003780 | Msa0074030 | 0.825191 | 5.362151e-54 | -8.615850e-47 |
| Msa0003780 | Msa0074320 | 0.849898 | 2.405252e-60 | -8.615850e-47 |
| Msa0003780 | Msa0077530 | 0.805168 | 1.520335e-49 | -8.615850e-47 |
| Msa0003780 | Msa0079380 | 0.849355 | 3.410547e-60 | -8.615850e-47 |
| Msa0003780 | Msa0080200 | 0.818302 | 2.104272e-52 | -8.615850e-47 |
| Msa0003780 | Msa0086750 | 0.852866 | 3.483590e-61 | -8.615850e-47 |
| Msa0003780 | Msa0090520 | 0.819479 | 1.136488e-52 | -8.615850e-47 |
| Msa0003780 | Msa0091410 | 0.829101 | 6.215919e-55 | -8.615850e-47 |
| Msa0003780 | Msa0091880 | 0.863401 | 2.556585e-64 | -8.615850e-47 |
| Msa0003780 | Msa0094120 | 0.818392 | 2.007828e-52 | -8.615850e-47 |
| Msa0003780 | Msa0094470 | 0.880916 | 3.699742e-70 | -8.615850e-47 |
| Msa0003780 | Msa0097580 | 0.838174 | 3.364156e-57 | -8.615850e-47 |
| Msa0003780 | Msa0097600 | 0.808055 | 3.737492e-50 | -8.615850e-47 |
| Msa0003780 | Msa0100740 | 0.825250 | 5.192100e-54 | -8.615850e-47 |
| Msa0003780 | Msa0116130 | 0.815909 | 7.260318e-52 | -8.615850e-47 |
| Msa0003780 | Msa0116670 | 0.802222 | 6.213832e-49 | -8.615850e-47 |
| Msa0003780 | Msa0118710 | 0.840725 | 7.312591e-58 | -8.615850e-47 |
| Msa0003780 | Msa0127050 | 0.822580 | 2.195821e-53 | -8.615850e-47 |
| Msa0003780 | Msa0127310 | 0.844128 | 9.160291e-59 | -8.615850e-47 |
| Msa0003780 | Msa0128860 | 0.861012 | 1.382899e-63 | -8.615850e-47 |
| Msa0003780 | Msa0133540 | 0.843927 | 1.036899e-58 | -8.615850e-47 |
| Msa0003780 | Msa0137550 | 0.825667 | 4.137684e-54 | -8.615850e-47 |
| Msa0003780 | Msa0137990 | 0.819610 | 1.060913e-52 | -8.615850e-47 |
| Msa0003780 | Msa0138920 | 0.858156 | 9.994091e-63 | -8.615850e-47 |
| Msa0003780 | Msa0140820 | 0.859424 | 4.176695e-63 | -8.615850e-47 |
| Msa0003780 | Msa0146340 | 0.967822 | 8.249018e-128 | -8.615850e-47 |
| Msa0003780 | Msa0150300 | 0.868581 | 5.872095e-66 | -8.615850e-47 |
| Msa0003780 | Msa0165660 | 0.809634 | 1.717672e-50 | -8.615850e-47 |
| Msa0003780 | Msa0167480 | 0.814842 | 1.253726e-51 | -8.615850e-47 |
| Msa0003780 | Msa0169310 | 0.817457 | 3.264594e-52 | -8.615850e-47 |
| Msa0003780 | Msa0172070 | 0.871056 | 9.138083e-67 | -8.615850e-47 |
| Msa0003780 | Msa0172970 | 0.845920 | 3.005090e-59 | -8.615850e-47 |
| Msa0003780 | Msa0173530 | 0.800496 | 1.402703e-48 | -8.615850e-47 |
| Msa0003780 | Msa0174730 | 0.859733 | 3.371823e-63 | -8.615850e-47 |
| Msa0003780 | Msa0180020 | 0.827917 | 1.200108e-54 | -8.615850e-47 |
| Msa0003780 | Msa0181490 | 0.822776 | 1.977130e-53 | -8.615850e-47 |
| Msa0003780 | Msa0183900 | 0.827546 | 1.473741e-54 | -8.615850e-47 |
| Msa0003780 | Msa0187690 | 0.857992 | 1.118030e-62 | -8.615850e-47 |
| Msa0003780 | Msa0187930 | 0.880618 | 4.732791e-70 | -8.615850e-47 |
| Msa0003780 | Msa0189300 | 0.820523 | 6.557097e-53 | -8.615850e-47 |
| Msa0003780 | Msa0189320 | 0.819622 | 1.054485e-52 | -8.615850e-47 |
| Msa0003780 | Msa0189700 | 0.819621 | 1.055183e-52 | -8.615850e-47 |
| Msa0003780 | Msa0194540 | 0.872683 | 2.633557e-67 | -8.615850e-47 |
| Msa0003780 | Msa0199880 | 0.813692 | 2.250126e-51 | -8.615850e-47 |
| Msa0003780 | Msa0202020 | 0.810064 | 1.388017e-50 | -8.615850e-47 |
| Msa0003780 | Msa0220720 | 0.828863 | 7.098034e-55 | -8.615850e-47 |
| Msa0003780 | Msa0225740 | 0.825424 | 4.724439e-54 | -8.615850e-47 |
| Msa0003780 | Msa0226470 | 0.807360 | 5.251320e-50 | -8.615850e-47 |
| Msa0003780 | Msa0230490 | 0.840903 | 6.569144e-58 | -8.615850e-47 |
| Msa0003780 | Msa0231100 | 0.803921 | 2.766917e-49 | -8.615850e-47 |
| Msa0003780 | Msa0231660 | 0.815024 | 1.142409e-51 | -8.615850e-47 |
| Msa0003780 | Msa0232010 | 0.827927 | 1.193921e-54 | -8.615850e-47 |
| Msa0003780 | Msa0232080 | 0.832706 | 8.109988e-56 | -8.615850e-47 |
| Msa0003780 | Msa0242410 | 0.818587 | 1.813468e-52 | -8.615850e-47 |
| Msa0003780 | Msa0244780 | 0.881156 | 3.032642e-70 | -8.615850e-47 |
| Msa0003780 | Msa0250820 | 0.870974 | 9.725220e-67 | -8.615850e-47 |
| Msa0003780 | Msa0250870 | 0.801534 | 8.607143e-49 | -8.615850e-47 |
| Msa0003780 | Msa0258390 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa0003780 | Msa0258850 | 0.819666 | 1.030331e-52 | -8.615850e-47 |
| Msa0003780 | Msa0262310 | 0.846378 | 2.255681e-59 | -8.615850e-47 |
| Msa0003780 | Msa0264010 | 0.890631 | 8.271431e-74 | -8.615850e-47 |
| Msa0003780 | Msa0264570 | 0.830150 | 3.453913e-55 | -8.615850e-47 |
| Msa0003780 | Msa0265430 | 0.819985 | 8.711433e-53 | -8.615850e-47 |
| Msa0003780 | Msa0267970 | 0.807724 | 4.395680e-50 | -8.615850e-47 |
| Msa0003780 | Msa0268130 | 0.887834 | 1.007073e-72 | -8.615850e-47 |
| Msa0003780 | Msa0280610 | 0.827109 | 1.875271e-54 | -8.615850e-47 |
| Msa0003780 | Msa0289580 | 0.865748 | 4.714381e-65 | -8.615850e-47 |
| Msa0003780 | Msa0289610 | 0.869971 | 2.074866e-66 | -8.615850e-47 |
| Msa0003780 | Msa0298140 | 0.823331 | 1.467242e-53 | -8.615850e-47 |
| Msa0003780 | Msa0298200 | 0.814529 | 1.471148e-51 | -8.615850e-47 |
| Msa0003780 | Msa0298990 | 0.888461 | 5.782531e-73 | -8.615850e-47 |
| Msa0003780 | Msa0299870 | 0.816512 | 5.322221e-52 | -8.615850e-47 |
| Msa0003780 | Msa0304590 | 0.800659 | 1.298929e-48 | -8.615850e-47 |
| Msa0003780 | Msa0306690 | 0.812100 | 5.023577e-51 | -8.615850e-47 |
| Msa0003780 | Msa0309770 | 0.800930 | 1.143698e-48 | -8.615850e-47 |
| Msa0003780 | Msa0317910 | 0.811142 | 8.117300e-51 | -8.615850e-47 |
| Msa0003780 | Msa0321640 | 0.826758 | 2.276098e-54 | -8.615850e-47 |
| Msa0003780 | Msa0322890 | 0.803026 | 4.242409e-49 | -8.615850e-47 |
| Msa0003780 | Msa0327300 | 0.875218 | 3.663935e-68 | -8.615850e-47 |
| Msa0003780 | Msa0327330 | 0.934342 | 4.685027e-96 | -8.615850e-47 |
| Msa0003780 | Msa0335730 | 0.805417 | 1.348282e-49 | -8.615850e-47 |
| Msa0003780 | Msa0336010 | 0.898617 | 4.449427e-77 | -8.615850e-47 |
| Msa0003780 | Msa0337240 | 0.819937 | 8.935951e-53 | -8.615850e-47 |
| Msa0003780 | Msa0337650 | 0.841064 | 5.958043e-58 | -8.615850e-47 |
| Msa0003780 | Msa0340380 | 0.842789 | 2.087031e-58 | -8.615850e-47 |
| Msa0003780 | Msa0348830 | 0.850756 | 1.382529e-60 | -8.615850e-47 |
| Msa0003780 | Msa0357900 | 0.821333 | 4.268243e-53 | -8.615850e-47 |
| Msa0003780 | Msa0366890 | 0.872777 | 2.449784e-67 | -8.615850e-47 |
| Msa0003780 | Msa0369050 | 0.812962 | 3.255998e-51 | -8.615850e-47 |
| Msa0003780 | Msa0369450 | 0.857643 | 1.419213e-62 | -8.615850e-47 |
| Msa0003780 | Msa0376300 | 0.801472 | 8.861501e-49 | -8.615850e-47 |
| Msa0003780 | Msa0385300 | 0.823354 | 1.448767e-53 | -8.615850e-47 |
| Msa0003780 | Msa0385580 | 0.860651 | 1.780643e-63 | -8.615850e-47 |
| Msa0003780 | Msa0393370 | 0.802819 | 4.680490e-49 | -8.615850e-47 |
| Msa0003780 | Msa0395820 | 0.816275 | 6.013535e-52 | -8.615850e-47 |
| Msa0003780 | Msa0395890 | 0.835551 | 1.570928e-56 | -8.615850e-47 |
| Msa0003780 | Msa0402650 | 0.829107 | 6.194108e-55 | -8.615850e-47 |
| Msa0003780 | Msa0414800 | 0.854111 | 1.530095e-61 | -8.615850e-47 |
| Msa0003780 | Msa0427150 | 0.858610 | 7.322264e-63 | -8.615850e-47 |
| Msa0003780 | Msa0432210 | 0.808813 | 2.575220e-50 | -8.615850e-47 |
| Msa0003780 | Msa0443390 | 0.851560 | 8.194603e-61 | -8.615850e-47 |
| Msa0003780 | Msa0447220 | 0.824321 | 8.597350e-54 | -8.615850e-47 |
| Msa0003780 | Msa0449210 | 0.805366 | 1.382054e-49 | -8.615850e-47 |
| Msa0003780 | Msa0458060 | 0.838240 | 3.233585e-57 | -8.615850e-47 |
| Msa0003780 | Msa0471440 | 0.820741 | 5.844239e-53 | -8.615850e-47 |
| Msa0003780 | Msa0479430 | 0.823753 | 1.168975e-53 | -8.615850e-47 |
| Msa0003780 | Msa0483110 | 0.848797 | 4.874015e-60 | -8.615850e-47 |
| Msa0003780 | Msa0497490 | 0.823943 | 1.055056e-53 | -8.615850e-47 |
| Msa0003780 | Msa0505500 | 0.809283 | 2.042776e-50 | -8.615850e-47 |
| Msa0003780 | Msa0508590 | 0.804957 | 1.683459e-49 | -8.615850e-47 |
| Msa0003780 | Msa0508630 | 0.810763 | 9.806249e-51 | -8.615850e-47 |
| Msa0003780 | Msa0510350 | 0.829405 | 5.242602e-55 | -8.615850e-47 |
| Msa0003780 | Msa0517050 | 0.820507 | 6.613570e-53 | -8.615850e-47 |
| Msa0003780 | Msa0521050 | 0.845313 | 4.391577e-59 | -8.615850e-47 |
| Msa0003780 | Msa0523120 | 0.843760 | 1.149446e-58 | -8.615850e-47 |
| Msa0003780 | Msa0526540 | 0.882539 | 9.568824e-71 | -8.615850e-47 |
| Msa0003780 | Msa0527020 | 0.817235 | 3.663106e-52 | -8.615850e-47 |
| Msa0003780 | Msa0527150 | 0.833415 | 5.402618e-56 | -8.615850e-47 |
| Msa0003780 | Msa0529680 | 0.801170 | 1.021413e-48 | -8.615850e-47 |
| Msa0003780 | Msa0531650 | 0.800445 | 1.436250e-48 | -8.615850e-47 |
| Msa0003780 | Msa0547940 | 0.806289 | 8.841772e-50 | -8.615850e-47 |
| Msa0003780 | Msa0554920 | 0.839549 | 1.482615e-57 | -8.615850e-47 |
| Msa0003780 | Msa0571920 | 0.842191 | 3.005808e-58 | -8.615850e-47 |
| Msa0003780 | Msa0575170 | 0.817152 | 3.824109e-52 | -8.615850e-47 |
| Msa0003780 | Msa0576940 | 0.884030 | 2.714055e-71 | -8.615850e-47 |
| Msa0003780 | Msa0581110 | 0.810803 | 9.611335e-51 | -8.615850e-47 |
| Msa0003780 | Msa0581280 | 0.815200 | 1.044172e-51 | -8.615850e-47 |
| Msa0003780 | Msa0588360 | 0.851011 | 1.171275e-60 | -8.615850e-47 |
| Msa0003780 | Msa0601150 | 0.803083 | 4.129419e-49 | -8.615850e-47 |
| Msa0003780 | Msa0602920 | 0.810447 | 1.147682e-50 | -8.615850e-47 |
| Msa0003780 | Msa0603320 | 0.855144 | 7.683052e-62 | -8.615850e-47 |
| Msa0003780 | Msa0608320 | 0.832015 | 1.202966e-55 | -8.615850e-47 |
| Msa0003780 | Msa0608500 | 0.833507 | 5.126299e-56 | -8.615850e-47 |
| Msa0003780 | Msa0615440 | 0.894766 | 1.810460e-75 | -8.615850e-47 |
| Msa0003780 | Msa0620890 | 0.812724 | 3.671298e-51 | -8.615850e-47 |
| Msa0003780 | Msa0621950 | 0.822020 | 2.961734e-53 | -8.615850e-47 |
| Msa0003780 | Msa0622750 | 0.873605 | 1.292129e-67 | -8.615850e-47 |
| Msa0003780 | Msa0622950 | 0.801582 | 8.412727e-49 | -8.615850e-47 |
| Msa0003780 | Msa0623200 | 0.859878 | 3.049529e-63 | -8.615850e-47 |
| Msa0003780 | Msa0623790 | 0.851649 | 7.732263e-61 | -8.615850e-47 |
| Msa0003780 | Msa0643560 | 0.850645 | 1.485380e-60 | -8.615850e-47 |
| Msa0003780 | Msa0647500 | 0.826314 | 2.904042e-54 | -8.615850e-47 |
| Msa0003780 | Msa0649020 | 0.824007 | 1.019184e-53 | -8.615850e-47 |
| Msa0003780 | Msa0649050 | 0.826146 | 3.184348e-54 | -8.615850e-47 |
| Msa0003780 | Msa0661300 | 0.844709 | 6.390183e-59 | -8.615850e-47 |
| Msa0003780 | Msa0666230 | 0.827097 | 1.888508e-54 | -8.615850e-47 |
| Msa0003780 | Msa0669520 | 0.835927 | 1.261948e-56 | -8.615850e-47 |
| Msa0003780 | Msa0677290 | 0.818784 | 1.635800e-52 | -8.615850e-47 |
| Msa0003780 | Msa0688850 | 0.835527 | 1.593123e-56 | -8.615850e-47 |
| Msa0003780 | Msa0689260 | 0.816265 | 6.046057e-52 | -8.615850e-47 |
| Msa0003780 | Msa0691530 | 0.822757 | 1.996571e-53 | -8.615850e-47 |
| Msa0003780 | Msa0691900 | 0.840922 | 6.494593e-58 | -8.615850e-47 |
| Msa0003780 | Msa0698490 | 0.896178 | 4.733050e-76 | -8.615850e-47 |
| Msa0003780 | Msa0698660 | 0.898830 | 3.609744e-77 | -8.615850e-47 |
| Msa0003780 | Msa0698780 | 0.865840 | 4.409470e-65 | -8.615850e-47 |
| Msa0003780 | Msa0698800 | 0.803969 | 2.704246e-49 | -8.615850e-47 |
| Msa0003780 | Msa0738100 | 0.831437 | 1.670389e-55 | -8.615850e-47 |
| Msa0003780 | Msa0750880 | 0.800498 | 1.401046e-48 | -8.615850e-47 |
| Msa0003780 | Msa0753140 | 0.819873 | 9.239463e-53 | -8.615850e-47 |
| Msa0003780 | Msa0780490 | 0.841220 | 5.421856e-58 | -8.615850e-47 |
| Msa0003780 | Msa0785130 | 0.826617 | 2.459060e-54 | -8.615850e-47 |
| Msa0003780 | Msa0788850 | 0.876963 | 9.190730e-69 | -8.615850e-47 |
| Msa0003780 | Msa0792760 | 0.861091 | 1.308968e-63 | -8.615850e-47 |
| Msa0003780 | Msa0794670 | 0.811292 | 7.530806e-51 | -8.615850e-47 |
| Msa0003780 | Msa0806880 | 0.809073 | 2.266173e-50 | -8.615850e-47 |
| Msa0003780 | Msa0808270 | 0.825036 | 5.835535e-54 | -8.615850e-47 |
| Msa0003780 | Msa0817540 | 0.830438 | 2.936632e-55 | -8.615850e-47 |
| Msa0003780 | Msa0830540 | 0.811462 | 6.918030e-51 | -8.615850e-47 |
| Msa0003780 | Msa0849500 | 0.817153 | 3.821723e-52 | -8.615850e-47 |
| Msa0003780 | Msa0849510 | 0.835619 | 1.509899e-56 | -8.615850e-47 |
| Msa0003780 | Msa0867060 | 0.813963 | 1.961392e-51 | -8.615850e-47 |
| Msa0003780 | Msa0881290 | 0.819240 | 1.288394e-52 | -8.615850e-47 |
| Msa0003780 | Msa0888580 | 0.821823 | 3.288839e-53 | -8.615850e-47 |
| Msa0003780 | Msa0902760 | 0.856940 | 2.289341e-62 | -8.615850e-47 |
| Msa0003780 | Msa0906780 | 0.819836 | 9.421799e-53 | -8.615850e-47 |
| Msa0003780 | Msa0915280 | 0.805007 | 1.643117e-49 | -8.615850e-47 |
| Msa0003780 | Msa0944190 | 0.802870 | 4.569030e-49 | -8.615850e-47 |
| Msa0003780 | Msa0945990 | 0.838130 | 3.451691e-57 | -8.615850e-47 |
| Msa0003780 | Msa0953150 | 0.808633 | 2.813882e-50 | -8.615850e-47 |
| Msa0003780 | Msa0953310 | 0.853212 | 2.775023e-61 | -8.615850e-47 |
| Msa0003780 | Msa0968590 | 0.842890 | 1.960973e-58 | -8.615850e-47 |
| Msa0003780 | Msa0970060 | 0.831405 | 1.700462e-55 | -8.615850e-47 |
| Msa0003780 | Msa0989540 | 0.840009 | 1.125455e-57 | -8.615850e-47 |
| Msa0003780 | Msa1006840 | 0.883349 | 4.837199e-71 | -8.615850e-47 |
| Msa0003780 | Msa1012740 | 0.829229 | 5.785630e-55 | -8.615850e-47 |
| Msa0003780 | Msa1013400 | 0.865123 | 7.418082e-65 | -8.615850e-47 |
| Msa0003780 | Msa1017630 | 0.808140 | 3.585568e-50 | -8.615850e-47 |
| Msa0003780 | Msa1019240 | 0.872670 | 2.660292e-67 | -8.615850e-47 |
| Msa0003780 | Msa1019260 | 0.871039 | 9.255536e-67 | -8.615850e-47 |
| Msa0003780 | Msa1040400 | 0.802345 | 5.862379e-49 | -8.615850e-47 |
| Msa0003780 | Msa1042780 | 0.820183 | 7.849162e-53 | -8.615850e-47 |
| Msa0003780 | Msa1043690 | 0.959787 | 7.917681e-118 | -8.615850e-47 |
| Msa0003780 | Msa1051880 | 0.884867 | 1.328682e-71 | -8.615850e-47 |
| Msa0003780 | Msa1080350 | 0.801570 | 8.460016e-49 | -8.615850e-47 |
| Msa0003780 | Msa1081150 | 0.877322 | 6.893867e-69 | -8.615850e-47 |
| Msa0003780 | Msa1081930 | 0.822360 | 2.469842e-53 | -8.615850e-47 |
| Msa0003780 | Msa1081980 | 0.821207 | 4.563469e-53 | -8.615850e-47 |
| Msa0003780 | Msa1088490 | 0.836488 | 9.084837e-57 | -8.615850e-47 |
| Msa0003780 | Msa1088940 | 0.849442 | 3.225309e-60 | -8.615850e-47 |
| Msa0003780 | Msa1093530 | 0.855768 | 5.055088e-62 | -8.615850e-47 |
| Msa0003780 | Msa1104140 | 0.920426 | 1.298789e-87 | -8.615850e-47 |
| Msa0003780 | Msa1104210 | 0.877466 | 6.143631e-69 | -8.615850e-47 |
| Msa0003780 | Msa1106700 | 0.812920 | 3.325006e-51 | -8.615850e-47 |
| Msa0003780 | Msa1121440 | 0.815096 | 1.101351e-51 | -8.615850e-47 |
| Msa0003780 | Msa1124110 | 0.805516 | 1.285809e-49 | -8.615850e-47 |
| Msa0003780 | Msa1125860 | 0.810185 | 1.307192e-50 | -8.615850e-47 |
| Msa0003780 | Msa1126060 | 0.806560 | 7.752508e-50 | -8.615850e-47 |
| Msa0003780 | Msa1126510 | 0.860373 | 2.161210e-63 | -8.615850e-47 |
| Msa0003780 | Msa1126770 | 0.812866 | 3.416658e-51 | -8.615850e-47 |
| Msa0003780 | Msa1126830 | 0.813911 | 2.013487e-51 | -8.615850e-47 |
| Msa0003780 | Msa1135890 | 0.848448 | 6.089069e-60 | -8.615850e-47 |
| Msa0003780 | Msa1143650 | 0.801013 | 1.099833e-48 | -8.615850e-47 |
| Msa0003780 | Msa1147900 | 0.800411 | 1.459255e-48 | -8.615850e-47 |
| Msa0003780 | Msa1165940 | 0.851331 | 9.513942e-61 | -8.615850e-47 |
| Msa0003780 | Msa1166860 | 0.878009 | 3.970042e-69 | -8.615850e-47 |
| Msa0003780 | Msa1166870 | 0.834896 | 2.298605e-56 | -8.615850e-47 |
| Msa0003780 | Msa1179950 | 0.814962 | 1.179267e-51 | -8.615850e-47 |
| Msa0003780 | Msa1181830 | 0.839476 | 1.549007e-57 | -8.615850e-47 |
| Msa0003780 | Msa1181840 | 0.821010 | 5.068170e-53 | -8.615850e-47 |
| Msa0003780 | Msa1181850 | 0.860661 | 1.767618e-63 | -8.615850e-47 |
| Msa0003780 | Msa1181860 | 0.858919 | 5.916399e-63 | -8.615850e-47 |
| Msa0003780 | Msa1206670 | 0.838118 | 3.476504e-57 | -8.615850e-47 |
| Msa0003780 | Msa1207270 | 0.837992 | 3.746950e-57 | -8.615850e-47 |
| Msa0003780 | Msa1209200 | 0.832925 | 7.155640e-56 | -8.615850e-47 |
| Msa0003780 | Msa1213480 | 0.814891 | 1.223143e-51 | -8.615850e-47 |
| Msa0003780 | Msa1215820 | 0.869277 | 3.491736e-66 | -8.615850e-47 |
| Msa0003780 | Msa1218140 | 0.818891 | 1.546718e-52 | -8.615850e-47 |
| Msa0003780 | Msa1218600 | 0.847283 | 1.275235e-59 | -8.615850e-47 |
| Msa0003780 | Msa1230580 | 0.808875 | 2.497720e-50 | -8.615850e-47 |
| Msa0003780 | Msa1237940 | 0.807076 | 6.031812e-50 | -8.615850e-47 |
| Msa0003780 | Msa1254610 | 0.804892 | 1.736462e-49 | -8.615850e-47 |
| Msa0003780 | Msa1257510 | 0.859815 | 3.186122e-63 | -8.615850e-47 |
| Msa0003780 | Msa1265630 | 0.872951 | 2.141874e-67 | -8.615850e-47 |
| Msa0003780 | Msa1266060 | 0.809157 | 2.173786e-50 | -8.615850e-47 |
| Msa0003780 | Msa1281190 | 0.822825 | 1.925742e-53 | -8.615850e-47 |
| Msa0003780 | Msa1292830 | 0.818029 | 2.426114e-52 | -8.615850e-47 |
| Msa0003780 | Msa1295170 | 0.806729 | 7.141845e-50 | -8.615850e-47 |
| Msa0003780 | Msa1300380 | 0.806097 | 9.706008e-50 | -8.615850e-47 |
| Msa0003780 | Msa1305050 | 0.825747 | 3.961019e-54 | -8.615850e-47 |
| Msa0003780 | Msa1338190 | 0.837361 | 5.438428e-57 | -8.615850e-47 |
| Msa0003780 | Msa1343260 | 0.829114 | 6.168034e-55 | -8.615850e-47 |
| Msa0003780 | Msa1358250 | 0.820722 | 5.902539e-53 | -8.615850e-47 |
| Msa0003780 | Msa1362790 | 0.812309 | 4.522690e-51 | -8.615850e-47 |
| Msa0003780 | Msa1363330 | 0.886116 | 4.523599e-72 | -8.615850e-47 |
| Msa0003780 | Msa1366180 | 0.856766 | 2.577120e-62 | -8.615850e-47 |
| Msa0003780 | Msa1369190 | 0.810518 | 1.107435e-50 | -8.615850e-47 |
| Msa0003780 | Msa1374120 | 0.962726 | 3.192265e-121 | -8.615850e-47 |
| Msa0003780 | Msa1379760 | 0.863930 | 1.751643e-64 | -8.615850e-47 |
| Msa0003780 | Msa1382560 | 0.807693 | 4.461688e-50 | -8.615850e-47 |
| Msa0003780 | Msa1382620 | 0.908061 | 2.579129e-81 | -8.615850e-47 |
| Msa0003780 | Msa1386600 | 0.887294 | 1.619551e-72 | -8.615850e-47 |
| Msa0003780 | Msa1391410 | 0.817983 | 2.484185e-52 | -8.615850e-47 |
| Msa0003780 | Msa1392780 | 0.801128 | 1.042044e-48 | -8.615850e-47 |
| Msa0003780 | Msa1394290 | 0.890637 | 8.232057e-74 | -8.615850e-47 |
| Msa0003780 | Msa1399530 | 0.931111 | 6.112049e-94 | -8.615850e-47 |
| Msa0003780 | Msa1407070 | 0.835914 | 1.271263e-56 | -8.615850e-47 |
| Msa0003780 | Msa1407460 | 0.812023 | 5.223177e-51 | -8.615850e-47 |
| Msa0003780 | Msa1410440 | 0.812010 | 5.257518e-51 | -8.615850e-47 |
| Msa0003780 | Msa1413500 | 0.814544 | 1.459864e-51 | -8.615850e-47 |
| Msa0003780 | Msa1427560 | 0.818934 | 1.512444e-52 | -8.615850e-47 |
| Msa0003780 | Msa1432420 | 0.802038 | 6.780463e-49 | -8.615850e-47 |
| Msa0003780 | Msa1432700 | 0.874771 | 5.202778e-68 | -8.615850e-47 |
| Msa0003780 | Msa1433310 | 0.838393 | 2.953967e-57 | -8.615850e-47 |
| Msa0003780 | Msa1437860 | 0.818531 | 1.867124e-52 | -8.615850e-47 |
| Msa0003780 | Msa1444310 | 0.803116 | 4.065329e-49 | -8.615850e-47 |
| Msa0003780 | Msa1448690 | 0.886027 | 4.888027e-72 | -8.615850e-47 |
| Msa0003780 | Msa1450280 | 0.827534 | 1.483268e-54 | -8.615850e-47 |
| Msa0003780 | Msa1456050 | 0.849446 | 3.217498e-60 | -8.615850e-47 |
| Msa0003780 | Msa1457920 | 0.846644 | 1.907951e-59 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0003780 | MtrunA17_Chr1g0155331 | 99.180 | 244 | 2 | 0 | 1 | 244 | 1 | 244 | 4.50e-180 | 493 |
| Msa0003780 | MtrunA17_Chr2g0298841 | 97.951 | 244 | 5 | 0 | 1 | 244 | 1 | 244 | 1.35e-177 | 487 |
| Msa0003780 | MtrunA17_Chr4g0002321 | 87.137 | 241 | 31 | 0 | 4 | 244 | 3 | 243 | 1.42e-159 | 442 |
| Msa0003780 | MtrunA17_Chr7g0237701 | 46.383 | 235 | 125 | 1 | 10 | 244 | 13 | 246 | 5.67e-74 | 225 |
| Msa0003780 | MtrunA17_Chr1g0155311 | 98.361 | 61 | 1 | 0 | 174 | 234 | 2 | 62 | 3.15e-39 | 130 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0003780 | AT3G13580.5 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.4 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.2 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.3 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.1 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.7 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.8 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.6 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT3G13580.9 | 82.787 | 244 | 42 | 0 | 1 | 244 | 1 | 244 | 4.99e-154 | 428 |
| Msa0003780 | AT2G01250.1 | 84.583 | 240 | 37 | 0 | 5 | 244 | 3 | 242 | 1.03e-151 | 422 |
| Msa0003780 | AT2G44120.1 | 83.750 | 240 | 39 | 0 | 5 | 244 | 3 | 242 | 5.06e-151 | 420 |
| Msa0003780 | AT2G44120.2 | 83.750 | 240 | 39 | 0 | 5 | 244 | 8 | 247 | 7.07e-151 | 420 |
| Msa0003780 | AT2G01250.2 | 80.000 | 175 | 35 | 0 | 5 | 179 | 3 | 177 | 9.76e-97 | 281 |
| Msa0003780 | AT1G80750.1 | 42.915 | 247 | 138 | 2 | 1 | 244 | 1 | 247 | 1.17e-63 | 199 |
Find 86 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAAATCTTCCTTGATTT+TGG | 0.006132 | 1_1:+6323114 | None:intergenic |
| TGAAATATCAATGGGCTTTA+TGG | 0.044564 | 1_1:+6324420 | None:intergenic |
| CTAAGCTCTTGTTCATTATT+AGG | 0.173523 | 1_1:-6323270 | Msa0003780:CDS |
| TGCTTCTTCAAAACGGATTC+AGG | 0.216526 | 1_1:+6324115 | None:intergenic |
| TTAAAGCAAAACTGGGATTA+AGG | 0.234875 | 1_1:+6320770 | None:intergenic |
| CTTTATGGACTGACATGTTA+TGG | 0.294763 | 1_1:+6324435 | None:intergenic |
| CCCTGACGCTCTTCAGATTA+GGG | 0.318959 | 1_1:+6321352 | None:intergenic |
| GATCTTTAATATTTAGTTCA+TGG | 0.321508 | 1_1:-6320661 | Msa0003780:three_prime_UTR |
| TTATCCAATGGGCAGGTTCT+TGG | 0.334500 | 1_1:-6321055 | Msa0003780:intron |
| ATATTCCTTGGCGTATTGTT+TGG | 0.342275 | 1_1:+6323997 | None:intergenic |
| GTCAAGGATGAATAAGTAAA+AGG | 0.346460 | 1_1:+6320609 | None:intergenic |
| AGTAAGCTTTAAAACTGAAT+TGG | 0.358565 | 1_1:+6320582 | None:intergenic |
| AAGAAAATGAAACTAGGGTT+TGG | 0.374936 | 1_1:+6324353 | None:intergenic |
| TATCCAATGGGCAGGTTCTT+GGG | 0.378090 | 1_1:-6321054 | Msa0003780:intron |
| CTGAAACAAGGAAACTCATT+TGG | 0.390452 | 1_1:-6324027 | Msa0003780:CDS |
| TCCCTGACGCTCTTCAGATT+AGG | 0.391787 | 1_1:+6321351 | None:intergenic |
| TGGACTGACATGTTATGGGC+TGG | 0.396514 | 1_1:+6324440 | None:intergenic |
| CTCTGCCCTTGAAATATCAA+TGG | 0.397811 | 1_1:+6324411 | None:intergenic |
| AAGGTGGTGATGCTGGAAAC+AGG | 0.400679 | 1_1:-6320886 | Msa0003780:CDS |
| TTTATGGACTGACATGTTAT+GGG | 0.405296 | 1_1:+6324436 | None:intergenic |
| AGCAGAAAAGGAACGAAGAA+TGG | 0.407682 | 1_1:-6324096 | Msa0003780:CDS |
| ACCCTAATCTGAAGAGCGTC+AGG | 0.410603 | 1_1:-6321353 | Msa0003780:CDS |
| ATTTAGTTCATGGCCTTGCC+TGG | 0.417457 | 1_1:-6320651 | Msa0003780:three_prime_UTR |
| CGCCAAGGAATATGATGATC+AGG | 0.420081 | 1_1:-6323987 | Msa0003780:intron |
| ATGAACAAGAGCTTAGCTTC+AGG | 0.424828 | 1_1:+6323277 | None:intergenic |
| TTTCTTCTTCATACCACCTA+GGG | 0.429478 | 1_1:+6320925 | None:intergenic |
| AGACAACTCAATCATTGAAC+AGG | 0.442244 | 1_1:-6321274 | Msa0003780:intron |
| TAAAGCCCATTGATATTTCA+AGG | 0.446126 | 1_1:-6324417 | Msa0003780:five_prime_UTR |
| AGAAAATGAAACTAGGGTTT+GGG | 0.462952 | 1_1:+6324354 | None:intergenic |
| TGAACAAGAGCTTAGCTTCA+GGG | 0.470751 | 1_1:+6323278 | None:intergenic |
| TCTGCCCTTGAAATATCAAT+GGG | 0.486107 | 1_1:+6324412 | None:intergenic |
| TATGTGGAAGGTGGTGATGC+TGG | 0.489381 | 1_1:-6320893 | Msa0003780:CDS |
| ATTGGTGAAGAAGCAGGAAC+AGG | 0.496788 | 1_1:-6324071 | Msa0003780:CDS |
| AACCCTGTGGAGCATGTTCA+CGG | 0.497828 | 1_1:+6321398 | None:intergenic |
| TTGATCTACAAGAGGGGCTA+CGG | 0.499583 | 1_1:-6321327 | Msa0003780:CDS |
| CTACCGTGAACATGCTCCAC+AGG | 0.502553 | 1_1:-6321401 | Msa0003780:CDS |
| GGGTACCCGTATGTAACATA+AGG | 0.504429 | 1_1:+6321372 | None:intergenic |
| GCAGAAAAGGAACGAAGAAT+GGG | 0.509066 | 1_1:-6324095 | Msa0003780:CDS |
| TACCTGATCATCATATTCCT+TGG | 0.513381 | 1_1:+6323985 | None:intergenic |
| GGACTGACATGTTATGGGCT+GGG | 0.514055 | 1_1:+6324441 | None:intergenic |
| GGGGCTACGGCAAAGTTGAC+AGG | 0.514631 | 1_1:-6321314 | Msa0003780:CDS |
| TGCAGCAAAAGGAGTTGATC+AGG | 0.517555 | 1_1:-6323342 | Msa0003780:intron |
| ATGGGCATTGGTGAAGAAGC+AGG | 0.518449 | 1_1:-6324077 | Msa0003780:CDS |
| GTTGAGCCTTATGTTACATA+CGG | 0.518747 | 1_1:-6321378 | Msa0003780:CDS |
| TGGAGAAGAAAATGAAACTA+GGG | 0.520258 | 1_1:+6324348 | None:intergenic |
| AGGGGAGCTTTGAGCTTGAA+AGG | 0.525834 | 1_1:+6320944 | None:intergenic |
| GTCGAAAGAGGAAGTGAAAA+CGG | 0.538106 | 1_1:-6324143 | Msa0003780:CDS |
| ACGCTATGGACCCAAAATCA+AGG | 0.543591 | 1_1:-6323125 | Msa0003780:CDS |
| AAAAGAAATCATTATGTGGA+AGG | 0.546296 | 1_1:-6320905 | Msa0003780:CDS |
| TTGTGTGAGATTAATTATCA+AGG | 0.551506 | 1_1:-6320808 | Msa0003780:three_prime_UTR |
| ATGGAGAAGAAAATGAAACT+AGG | 0.552088 | 1_1:+6324347 | None:intergenic |
| TGTTTGAAGGATGTCGAAAG+AGG | 0.557035 | 1_1:-6324155 | Msa0003780:intron |
| TTGTTCATTATTAGGATCAG+AGG | 0.561223 | 1_1:-6323262 | Msa0003780:CDS |
| CTTTGAGCTTGAAAGGCCAC+AGG | 0.568038 | 1_1:+6320951 | None:intergenic |
| AAACTGAATTGGCAAAGTCA+AGG | 0.571654 | 1_1:+6320593 | None:intergenic |
| GAAGAAAAGAAATCATTATG+TGG | 0.573776 | 1_1:-6320909 | Msa0003780:CDS |
| TGTTCATTATTAGGATCAGA+GGG | 0.574120 | 1_1:-6323261 | Msa0003780:intron |
| GAAGCGTGAAGCTAAACTCA+AGG | 0.589756 | 1_1:-6323317 | Msa0003780:CDS |
| AGAAATCATTATGTGGAAGG+TGG | 0.590613 | 1_1:-6320902 | Msa0003780:CDS |
| CTTGCCGCAGTAGATGGAGA+TGG | 0.596202 | 1_1:+6324328 | None:intergenic |
| AGAAGAAGAGAGCTGAAACA+AGG | 0.596539 | 1_1:-6324039 | Msa0003780:CDS |
| TTGAGCCTTATGTTACATAC+GGG | 0.597990 | 1_1:-6321377 | Msa0003780:CDS |
| AAAGCCCATTGATATTTCAA+GGG | 0.606981 | 1_1:-6324416 | Msa0003780:five_prime_UTR |
| TTGTTTGCCTCTCTGAAGTG+AGG | 0.607151 | 1_1:+6320977 | None:intergenic |
| GGGCAGGTTCTTGGGAAGCA+CGG | 0.607398 | 1_1:-6321046 | Msa0003780:intron |
| TTCTTCTTCATACCACCTAG+GGG | 0.609907 | 1_1:+6320926 | None:intergenic |
| TTCAAGCTCAAAGCTCCCCT+AGG | 0.610220 | 1_1:-6320941 | Msa0003780:CDS |
| AAGGAACGAAGAATGGGCAT+TGG | 0.610396 | 1_1:-6324089 | Msa0003780:CDS |
| CAGGGAATTGATCTACAAGA+GGG | 0.615110 | 1_1:-6321334 | Msa0003780:CDS |
| TTCTCCATCTCCATCTACTG+CGG | 0.616953 | 1_1:-6324332 | Msa0003780:five_prime_UTR |
| GAGAGGCAAACAACTTCCTG+TGG | 0.626203 | 1_1:-6320967 | Msa0003780:CDS |
| ACATCAACGAACTCATCAGA+AGG | 0.630261 | 1_1:-6320856 | Msa0003780:CDS |
| TCAGGGAATTGATCTACAAG+AGG | 0.639447 | 1_1:-6321335 | Msa0003780:CDS |
| CGTGAAGCTAAACTCAAGGG+TGG | 0.639969 | 1_1:-6323313 | Msa0003780:CDS |
| CATCTCCATCTACTGCGGCA+AGG | 0.640380 | 1_1:-6324327 | Msa0003780:intron |
| AGGTGGTGATGCTGGAAACA+GGG | 0.642090 | 1_1:-6320885 | Msa0003780:CDS |
| TACCGTGAACATGCTCCACA+GGG | 0.645382 | 1_1:-6321400 | Msa0003780:CDS |
| AAGCTCAAAGCTCCCCTAGG+TGG | 0.657354 | 1_1:-6320938 | Msa0003780:CDS |
| ATTCACGAGATACTAACAGT+TGG | 0.659550 | 1_1:-6321001 | Msa0003780:CDS |
| TAGAGCCAAACAATACGCCA+AGG | 0.659987 | 1_1:-6324002 | Msa0003780:CDS |
| AAGCGTGAAGCTAAACTCAA+GGG | 0.663061 | 1_1:-6323316 | Msa0003780:CDS |
| CCCTAATCTGAAGAGCGTCA+GGG | 0.672345 | 1_1:-6321352 | Msa0003780:CDS |
| TAACATAAGGCTCAACCCTG+TGG | 0.679817 | 1_1:+6321385 | None:intergenic |
| AGGGAATTGATCTACAAGAG+GGG | 0.717541 | 1_1:-6321333 | Msa0003780:CDS |
| AGTTGGTCCTCACTTCAGAG+AGG | 0.754549 | 1_1:-6320984 | Msa0003780:CDS |
| GAAAGAGGAAGTGAAAACGG+TGG | 0.767520 | 1_1:-6324140 | Msa0003780:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTATTGTTGTTTTAATTAAT+GGG | - | chr1_1:6321858-6321877 | Msa0003780:intron | 10.0% |
| !!! | AGTTTTGATTATGTAATTTT+AGG | - | chr1_1:6321079-6321098 | Msa0003780:intron | 15.0% |
| !!! | GTATAAATTAAAAAGGTATA+TGG | + | chr1_1:6321644-6321663 | None:intergenic | 15.0% |
| !! | AAATAATAAATCAATACTGT+AGG | + | chr1_1:6321803-6321822 | None:intergenic | 15.0% |
| !!! | GTTATTGTTGTTTTAATTAA+TGG | - | chr1_1:6321857-6321876 | Msa0003780:intron | 15.0% |
| !! | AATAACAAAATATTATGCAT+TGG | + | chr1_1:6322856-6322875 | None:intergenic | 15.0% |
| !!! | CAAATAATTTTATTTAGAAG+AGG | + | chr1_1:6322879-6322898 | None:intergenic | 15.0% |
| !!! | AACTTATTTTATGTTACATA+CGG | - | chr1_1:6322977-6322996 | Msa0003780:intron | 15.0% |
| !!! | TACTTCTTTTTATTTTCTTA+CGG | - | chr1_1:6323167-6323186 | Msa0003780:intron | 15.0% |
| !!! | TAATATTTTAAAGCAAAACT+GGG | + | chr1_1:6324270-6324289 | None:intergenic | 15.0% |
| !!! | ATAATATTTTAAAGCAAAAC+TGG | + | chr1_1:6324271-6324290 | None:intergenic | 15.0% |
| !!! | TAATATTTTAAAGCAAAACT+GGG | + | chr1_1:6324270-6324289 | None:intergenic | 15.0% |
| !!! | ATAATATTTTAAAGCAAAAC+TGG | + | chr1_1:6324271-6324290 | None:intergenic | 15.0% |
| !! | TTAATTTCTTCATTGTTTGA+AGG | - | chr1_1:6320862-6320881 | Msa0003780:CDS | 20.0% |
| !!! | TTAAAAAGGTATATGGATTA+AGG | + | chr1_1:6321637-6321656 | None:intergenic | 20.0% |
| !!! | GTAACTTTTTAGTGTATAAT+TGG | - | chr1_1:6322040-6322059 | Msa0003780:intron | 20.0% |
| !!! | GATCTTTAATATTTAGTTCA+TGG | - | chr1_1:6324369-6324388 | Msa0003780:five_prime_UTR | 20.0% |
| ! | AAAAGTAACAGATGTATGAA+TGG | + | chr1_1:6320756-6320775 | None:intergenic | 25.0% |
| ! | ATATTGGAGAACTTTGTAAA+TGG | - | chr1_1:6321214-6321233 | Msa0003780:intron | 25.0% |
| !!! | TAAGTTTTGTGATGCTATTT+GGG | + | chr1_1:6321458-6321477 | None:intergenic | 25.0% |
| !!! | ATAAGTTTTGTGATGCTATT+TGG | + | chr1_1:6321459-6321478 | None:intergenic | 25.0% |
| ! | TGAAAACAACTTATGAACAA+TGG | - | chr1_1:6321528-6321547 | Msa0003780:intron | 25.0% |
| !! | ATATGGATTAAGGAATTGTT+TGG | + | chr1_1:6321627-6321646 | None:intergenic | 25.0% |
| !! | ATAGTATACTAGTTATTTCC+AGG | - | chr1_1:6321824-6321843 | Msa0003780:intron | 25.0% |
| !!! | TAATTTTAGTATCAACGCTA+TGG | - | chr1_1:6321891-6321910 | Msa0003780:intron | 25.0% |
| !!! | CATTCAGATTGTTTTTTGTT+TGG | - | chr1_1:6321962-6321981 | Msa0003780:intron | 25.0% |
| ! | GAAAAACTATACATTGTCAT+AGG | + | chr1_1:6322318-6322337 | None:intergenic | 25.0% |
| ! | AGTCTTTCTATGTTTAATAC+AGG | - | chr1_1:6322388-6322407 | Msa0003780:intron | 25.0% |
| ! | GTCTTTCTATGTTTAATACA+GGG | - | chr1_1:6322389-6322408 | Msa0003780:intron | 25.0% |
| ! | TCTTTCTATGTTTAATACAG+GGG | - | chr1_1:6322390-6322409 | Msa0003780:intron | 25.0% |
| ! | AACTTACAACTAAAACTCTT+AGG | - | chr1_1:6322639-6322658 | Msa0003780:intron | 25.0% |
| ! | ACTTACAACTAAAACTCTTA+GGG | - | chr1_1:6322640-6322659 | Msa0003780:intron | 25.0% |
| ! | AAACTAAACAAGTATGAAAG+AGG | - | chr1_1:6323233-6323252 | Msa0003780:intron | 25.0% |
| ! | TATGAAAGAGGAAAAAGAAA+AGG | - | chr1_1:6323245-6323264 | Msa0003780:intron | 25.0% |
| ! | ATGAAAGAGGAAAAAGAAAA+GGG | - | chr1_1:6323246-6323265 | Msa0003780:intron | 25.0% |
| ! | AATGTAACATTTCTTCAGTT+TGG | + | chr1_1:6323394-6323413 | None:intergenic | 25.0% |
| ! | TCAAAAGAAATGGAAGAATA+AGG | + | chr1_1:6323569-6323588 | None:intergenic | 25.0% |
| ! | GAAGAAAAGAAATCATTATG+TGG | - | chr1_1:6324121-6324140 | Msa0003780:CDS | 25.0% |
| ! | AAAAGAAATCATTATGTGGA+AGG | - | chr1_1:6324125-6324144 | Msa0003780:CDS | 25.0% |
| ! | TTGTGTGAGATTAATTATCA+AGG | - | chr1_1:6324222-6324241 | Msa0003780:intron | 25.0% |
| !!! | CTTATTTTAACATATGCGAA+CGG | - | chr1_1:6324347-6324366 | Msa0003780:five_prime_UTR | 25.0% |
| ! | TTTATGGACTGACATGTTAT+GGG | + | chr1_1:6320597-6320616 | None:intergenic | 30.0% |
| ! | TGAAATATCAATGGGCTTTA+TGG | + | chr1_1:6320613-6320632 | None:intergenic | 30.0% |
| TAAAGCCCATTGATATTTCA+AGG | - | chr1_1:6320613-6320632 | Msa0003780:three_prime_UTR | 30.0% | |
| AAAGCCCATTGATATTTCAA+GGG | - | chr1_1:6320614-6320633 | Msa0003780:three_prime_UTR | 30.0% | |
| AGAAAATGAAACTAGGGTTT+GGG | + | chr1_1:6320679-6320698 | None:intergenic | 30.0% | |
| AAGAAAATGAAACTAGGGTT+TGG | + | chr1_1:6320680-6320699 | None:intergenic | 30.0% | |
| TGGAGAAGAAAATGAAACTA+GGG | + | chr1_1:6320685-6320704 | None:intergenic | 30.0% | |
| ATGGAGAAGAAAATGAAACT+AGG | + | chr1_1:6320686-6320705 | None:intergenic | 30.0% | |
| !!! | ATGTAATTTTAGGCCTTGTT+TGG | - | chr1_1:6321089-6321108 | Msa0003780:intron | 30.0% |
| ATAAGCTGTTAATCCAAACA+AGG | + | chr1_1:6321105-6321124 | None:intergenic | 30.0% | |
| TTAGTACAAGCTAGCTATAT+TGG | - | chr1_1:6321198-6321217 | Msa0003780:intron | 30.0% | |
| !! | AGTTGTTTTCAGCTTAAGTA+GGG | + | chr1_1:6321519-6321538 | None:intergenic | 30.0% |
| !! | AAGTTGTTTTCAGCTTAAGT+AGG | + | chr1_1:6321520-6321539 | None:intergenic | 30.0% |
| GATTAAGGAATTGTTTGGAT+TGG | + | chr1_1:6321622-6321641 | None:intergenic | 30.0% | |
| !! | TTTAATTTGTGTGCAGCAAA+AGG | - | chr1_1:6321677-6321696 | Msa0003780:intron | 30.0% |
| CTAAGCTCTTGTTCATTATT+AGG | - | chr1_1:6321760-6321779 | Msa0003780:intron | 30.0% | |
| TTGTTCATTATTAGGATCAG+AGG | - | chr1_1:6321768-6321787 | Msa0003780:intron | 30.0% | |
| TGTTCATTATTAGGATCAGA+GGG | - | chr1_1:6321769-6321788 | Msa0003780:intron | 30.0% | |
| ! | GCAAAATCTTCCTTGATTTT+GGG | + | chr1_1:6321918-6321937 | None:intergenic | 30.0% |
| ! | TGCAAAATCTTCCTTGATTT+TGG | + | chr1_1:6321919-6321938 | None:intergenic | 30.0% |
| !!! | TGTGATACACTTGTGTTTTT+TGG | - | chr1_1:6322138-6322157 | Msa0003780:intron | 30.0% |
| TTTGTTCAGTGAGTTATTCT+AGG | - | chr1_1:6322204-6322223 | Msa0003780:intron | 30.0% | |
| AGTTGTGATGTTATCAAACA+TGG | + | chr1_1:6322623-6322642 | None:intergenic | 30.0% | |
| GAAAATGAGAACAGAGAAAT+AGG | - | chr1_1:6322681-6322700 | Msa0003780:intron | 30.0% | |
| TGAGAAATAGAGTAGATTTG+AGG | - | chr1_1:6322734-6322753 | Msa0003780:intron | 30.0% | |
| !!! | ATTGGTCGTTTTTCAATTGA+AGG | + | chr1_1:6322838-6322857 | None:intergenic | 30.0% |
| GAAAAAGAAAAGGGTAATTG+TGG | - | chr1_1:6323255-6323274 | Msa0003780:intron | 30.0% | |
| ATCAAAACCTCTGCTATAAT+GGG | + | chr1_1:6323500-6323519 | None:intergenic | 30.0% | |
| ATTCTTCAACACAGTATTAG+AGG | + | chr1_1:6323525-6323544 | None:intergenic | 30.0% | |
| !! | TTTTGACTGCAGATCTTTAA+TGG | - | chr1_1:6323583-6323602 | Msa0003780:intron | 30.0% |
| TACAACATTTAGTGATTGCA+GGG | + | chr1_1:6323799-6323818 | None:intergenic | 30.0% | |
| CAATCACTAAATGTTGTAGT+CGG | - | chr1_1:6323801-6323820 | Msa0003780:intron | 30.0% | |
| !!! | CAGAAGGATGAATTAGTTTT+TGG | - | chr1_1:6324190-6324209 | Msa0003780:intron | 30.0% |
| TTAAAGCAAAACTGGGATTA+AGG | + | chr1_1:6324263-6324282 | None:intergenic | 30.0% | |
| TTAAAGCAAAACTGGGATTA+AGG | + | chr1_1:6324263-6324282 | None:intergenic | 30.0% | |
| GTCAAGGATGAATAAGTAAA+AGG | + | chr1_1:6324424-6324443 | None:intergenic | 30.0% | |
| ! | CTTTATGGACTGACATGTTA+TGG | + | chr1_1:6320598-6320617 | None:intergenic | 35.0% |
| TCTGCCCTTGAAATATCAAT+GGG | + | chr1_1:6320621-6320640 | None:intergenic | 35.0% | |
| AGTAACAGATGTATGAATGG+AGG | + | chr1_1:6320753-6320772 | None:intergenic | 35.0% | |
| ACAAAACCCTAAATCACGTT+GGG | + | chr1_1:6320821-6320840 | None:intergenic | 35.0% | |
| ! | CCTTTTCTGCTTCTTCAAAA+CGG | + | chr1_1:6320925-6320944 | None:intergenic | 35.0% |
| CTGAAACAAGGAAACTCATT+TGG | - | chr1_1:6321003-6321022 | Msa0003780:CDS | 35.0% | |
| ATATTCCTTGGCGTATTGTT+TGG | + | chr1_1:6321036-6321055 | None:intergenic | 35.0% | |
| TACCTGATCATCATATTCCT+TGG | + | chr1_1:6321048-6321067 | None:intergenic | 35.0% | |
| ! | ACTTTGTAAATGGCGTTTTG+TGG | - | chr1_1:6321224-6321243 | Msa0003780:intron | 35.0% |
| GTCAGTAGATAAGCTCAATT+AGG | - | chr1_1:6321479-6321498 | Msa0003780:intron | 35.0% | |
| TCAATTAGGCCAATCAAATC+AGG | - | chr1_1:6321493-6321512 | Msa0003780:intron | 35.0% | |
| GCTTATTTGAGCTTATCTAC+AGG | + | chr1_1:6321600-6321619 | None:intergenic | 35.0% | |
| ! | GTATACTAGTTATTTCCAGG+TGG | - | chr1_1:6321827-6321846 | Msa0003780:intron | 35.0% |
| ACAATAACAAGAAAACCACC+TGG | + | chr1_1:6321845-6321864 | None:intergenic | 35.0% | |
| AACACAAGTGTATCACAATG+AGG | + | chr1_1:6322135-6322154 | None:intergenic | 35.0% | |
| CTGAACAAACCTTTAATCAG+AGG | + | chr1_1:6322193-6322212 | None:intergenic | 35.0% | |
| TCATAGGTACACTTAACAGT+GGG | + | chr1_1:6322302-6322321 | None:intergenic | 35.0% | |
| TCAGGTGTAACTATATCTCA+AGG | + | chr1_1:6322340-6322359 | None:intergenic | 35.0% | |
| ! | AAATCACATCAAAGTGCTTC+AGG | + | chr1_1:6322358-6322377 | None:intergenic | 35.0% |
| AGCATAGAAAGACTATTCCA+AGG | - | chr1_1:6322418-6322437 | Msa0003780:intron | 35.0% | |
| GCATAGAAAGACTATTCCAA+GGG | - | chr1_1:6322419-6322438 | Msa0003780:intron | 35.0% | |
| CTATGCTTAATACAATCCCT+TGG | + | chr1_1:6322438-6322457 | None:intergenic | 35.0% | |
| ! | CTCTCTACTTGTTACTAGTT+AGG | - | chr1_1:6322593-6322612 | Msa0003780:intron | 35.0% |
| TAAAACTCTTAGGGTGTGTT+TGG | - | chr1_1:6322649-6322668 | Msa0003780:intron | 35.0% | |
| !! | AGTAGATTTGAGGTACTGTT+TGG | - | chr1_1:6322744-6322763 | Msa0003780:intron | 35.0% |
| !!! | TTTTTGAGTCTTCGCAAATC+TGG | + | chr1_1:6323321-6323340 | None:intergenic | 35.0% |
| ! | TTTGGTTCAGCAGAGAATTA+GGG | + | chr1_1:6323376-6323395 | None:intergenic | 35.0% |
| ! | ATTGACTCTAACACTGTGTT+TGG | + | chr1_1:6323467-6323486 | None:intergenic | 35.0% |
| GATCAAAACCTCTGCTATAA+TGG | + | chr1_1:6323501-6323520 | None:intergenic | 35.0% | |
| GGCTACATTGTAATATTGCA+TGG | + | chr1_1:6323548-6323567 | None:intergenic | 35.0% | |
| AGATCTGCAGTCAAAAGAAA+TGG | + | chr1_1:6323579-6323598 | None:intergenic | 35.0% | |
| ! | GTTGAGCCTTATGTTACATA+CGG | - | chr1_1:6323652-6323671 | Msa0003780:intron | 35.0% |
| ! | TTGAGCCTTATGTTACATAC+GGG | - | chr1_1:6323653-6323672 | Msa0003780:intron | 35.0% |
| AGACAACTCAATCATTGAAC+AGG | - | chr1_1:6323756-6323775 | Msa0003780:intron | 35.0% | |
| TTGAACAGGTTTGTCTGATT+TGG | - | chr1_1:6323770-6323789 | Msa0003780:intron | 35.0% | |
| CTACAACATTTAGTGATTGC+AGG | + | chr1_1:6323800-6323819 | None:intergenic | 35.0% | |
| TAGGAACCAAACAACAAAGT+CGG | + | chr1_1:6323867-6323886 | None:intergenic | 35.0% | |
| TTTGACTGACGTTATCCAAT+GGG | - | chr1_1:6323964-6323983 | Msa0003780:intron | 35.0% | |
| ATTCACGAGATACTAACAGT+TGG | - | chr1_1:6324029-6324048 | Msa0003780:CDS | 35.0% | |
| TTTCTTCTTCATACCACCTA+GGG | + | chr1_1:6324108-6324127 | None:intergenic | 35.0% | |
| ! | TTTTCTTCTTCATACCACCT+AGG | + | chr1_1:6324109-6324128 | None:intergenic | 35.0% |
| AGAAATCATTATGTGGAAGG+TGG | - | chr1_1:6324128-6324147 | Msa0003780:CDS | 35.0% | |
| AACTGGGATTAAGGAAAACT+GGG | + | chr1_1:6324305-6324324 | None:intergenic | 35.0% | |
| AAACTGGGATTAAGGAAAAC+TGG | + | chr1_1:6324255-6324274 | None:intergenic | 35.0% | |
| ! | AGAATTTTTCACTGCATTCC+AGG | + | chr1_1:6324400-6324419 | None:intergenic | 35.0% |
| AAACTGAATTGGCAAAGTCA+AGG | + | chr1_1:6324440-6324459 | None:intergenic | 35.0% | |
| CTCTGCCCTTGAAATATCAA+TGG | + | chr1_1:6320622-6320641 | None:intergenic | 40.0% | |
| TTCATCCCCAACGTGATTTA+GGG | - | chr1_1:6320812-6320831 | Msa0003780:three_prime_UTR | 40.0% | |
| CAAAACCCTAAATCACGTTG+GGG | + | chr1_1:6320820-6320839 | None:intergenic | 40.0% | |
| CACAAAACCCTAAATCACGT+TGG | + | chr1_1:6320822-6320841 | None:intergenic | 40.0% | |
| TGTTTGAAGGATGTCGAAAG+AGG | - | chr1_1:6320875-6320894 | Msa0003780:CDS | 40.0% | |
| GTCGAAAGAGGAAGTGAAAA+CGG | - | chr1_1:6320887-6320906 | Msa0003780:CDS | 40.0% | |
| ! | TGCTTCTTCAAAACGGATTC+AGG | + | chr1_1:6320918-6320937 | None:intergenic | 40.0% |
| !!! | CCGTTTTGAAGAAGCAGAAA+AGG | - | chr1_1:6320922-6320941 | Msa0003780:CDS | 40.0% |
| AGCAGAAAAGGAACGAAGAA+TGG | - | chr1_1:6320934-6320953 | Msa0003780:CDS | 40.0% | |
| GCAGAAAAGGAACGAAGAAT+GGG | - | chr1_1:6320935-6320954 | Msa0003780:CDS | 40.0% | |
| AGAAGAAGAGAGCTGAAACA+AGG | - | chr1_1:6320991-6321010 | Msa0003780:CDS | 40.0% | |
| CACATCAAGATAAGCACTTG+TGG | + | chr1_1:6321282-6321301 | None:intergenic | 40.0% | |
| ! | TAAGTAGGGCCTGATTTGAT+TGG | + | chr1_1:6321505-6321524 | None:intergenic | 40.0% |
| AAGCGTGAAGCTAAACTCAA+GGG | - | chr1_1:6321714-6321733 | Msa0003780:intron | 40.0% | |
| TGAACAAGAGCTTAGCTTCA+GGG | + | chr1_1:6321755-6321774 | None:intergenic | 40.0% | |
| ATGAACAAGAGCTTAGCTTC+AGG | + | chr1_1:6321756-6321775 | None:intergenic | 40.0% | |
| TGCAATGCACCTCTGATTAA+AGG | - | chr1_1:6322181-6322200 | Msa0003780:intron | 40.0% | |
| GTCATAGGTACACTTAACAG+TGG | + | chr1_1:6322303-6322322 | None:intergenic | 40.0% | |
| AGCATAGAAAGACTGTTCCA+AGG | - | chr1_1:6322451-6322470 | Msa0003780:intron | 40.0% | |
| GCATAGAAAGACTGTTCCAA+GGG | - | chr1_1:6322452-6322471 | Msa0003780:intron | 40.0% | |
| TTCGCAAATCTGGAGAGAAA+GGG | + | chr1_1:6323311-6323330 | None:intergenic | 40.0% | |
| CGAAGACTCAAAAAAGCAGT+AGG | - | chr1_1:6323327-6323346 | Msa0003780:CDS | 40.0% | |
| ! | GTTTGGTTCAGCAGAGAATT+AGG | + | chr1_1:6323377-6323396 | None:intergenic | 40.0% |
| TCTAACACTGTGTTTGGTAG+AGG | + | chr1_1:6323461-6323480 | None:intergenic | 40.0% | |
| !! | CTGCTATAATGGGTCTATCA+AGG | + | chr1_1:6323490-6323509 | None:intergenic | 40.0% |
| TGATAGACCCATTATAGCAG+AGG | - | chr1_1:6323490-6323509 | Msa0003780:intron | 40.0% | |
| TCAGGGAATTGATCTACAAG+AGG | - | chr1_1:6323695-6323714 | Msa0003780:intron | 40.0% | |
| CAGGGAATTGATCTACAAGA+GGG | - | chr1_1:6323696-6323715 | Msa0003780:intron | 40.0% | |
| AGGGAATTGATCTACAAGAG+GGG | - | chr1_1:6323697-6323716 | Msa0003780:intron | 40.0% | |
| TCTTTACTGTCAGACCTAGA+TGG | - | chr1_1:6323827-6323846 | Msa0003780:intron | 40.0% | |
| AATGGTGATCCATTCCATCT+AGG | + | chr1_1:6323844-6323863 | None:intergenic | 40.0% | |
| !! | ACCATTCCGACTTTGTTGTT+TGG | - | chr1_1:6323858-6323877 | Msa0003780:intron | 40.0% |
| ACCAAACAACAAAGTCGGAA+TGG | + | chr1_1:6323862-6323881 | None:intergenic | 40.0% | |
| !! | CTGTTCTAGCTTGAGCAAAT+AGG | + | chr1_1:6323886-6323905 | None:intergenic | 40.0% |
| AACAGTCCAGATTCTCTGTA+TGG | - | chr1_1:6323901-6323920 | Msa0003780:intron | 40.0% | |
| ACAACACCATACAGAGAATC+TGG | + | chr1_1:6323910-6323929 | None:intergenic | 40.0% | |
| CTTTGACTGACGTTATCCAA+TGG | - | chr1_1:6323963-6323982 | Msa0003780:intron | 40.0% | |
| TTCTTCTTCATACCACCTAG+GGG | + | chr1_1:6324107-6324126 | None:intergenic | 40.0% | |
| ACATCAACGAACTCATCAGA+AGG | - | chr1_1:6324174-6324193 | Msa0003780:intron | 40.0% | |
| TTCTCCATCTCCATCTACTG+CGG | - | chr1_1:6320698-6320717 | Msa0003780:three_prime_UTR | 45.0% | |
| ! | TTTTACCTTGCCGCAGTAGA+TGG | + | chr1_1:6320711-6320730 | None:intergenic | 45.0% |
| CTTCATCCCCAACGTGATTT+AGG | - | chr1_1:6320811-6320830 | Msa0003780:three_prime_UTR | 45.0% | |
| GAAAGAGGAAGTGAAAACGG+TGG | - | chr1_1:6320890-6320909 | Msa0003780:CDS | 45.0% | |
| AAGGAACGAAGAATGGGCAT+TGG | - | chr1_1:6320941-6320960 | Msa0003780:CDS | 45.0% | |
| ATTGGTGAAGAAGCAGGAAC+AGG | - | chr1_1:6320959-6320978 | Msa0003780:CDS | 45.0% | |
| TAGAGCCAAACAATACGCCA+AGG | - | chr1_1:6321028-6321047 | Msa0003780:CDS | 45.0% | |
| CGCCAAGGAATATGATGATC+AGG | - | chr1_1:6321043-6321062 | Msa0003780:CDS | 45.0% | |
| ! | TGCAGCAAAAGGAGTTGATC+AGG | - | chr1_1:6321688-6321707 | Msa0003780:intron | 45.0% |
| GAAGCGTGAAGCTAAACTCA+AGG | - | chr1_1:6321713-6321732 | Msa0003780:intron | 45.0% | |
| ACGCTATGGACCCAAAATCA+AGG | - | chr1_1:6321905-6321924 | Msa0003780:intron | 45.0% | |
| TAGAAAGACTGTTCCAAGGG+AGG | - | chr1_1:6322455-6322474 | Msa0003780:intron | 45.0% | |
| ACTAGCAAAACAACCTCCCT+TGG | + | chr1_1:6322471-6322490 | None:intergenic | 45.0% | |
| CTTACGGCAATCATGTGTGT+TGG | - | chr1_1:6323183-6323202 | Msa0003780:intron | 45.0% | |
| CTTCGCAAATCTGGAGAGAA+AGG | + | chr1_1:6323312-6323331 | None:intergenic | 45.0% | |
| TAACATAAGGCTCAACCCTG+TGG | + | chr1_1:6323648-6323667 | None:intergenic | 45.0% | |
| GGGTACCCGTATGTAACATA+AGG | + | chr1_1:6323661-6323680 | None:intergenic | 45.0% | |
| TTGATCTACAAGAGGGGCTA+CGG | - | chr1_1:6323703-6323722 | Msa0003780:intron | 45.0% | |
| ACTGTCAGACCTAGATGGAA+TGG | - | chr1_1:6323832-6323851 | Msa0003780:intron | 45.0% | |
| TTATCCAATGGGCAGGTTCT+TGG | - | chr1_1:6323975-6323994 | Msa0003780:intron | 45.0% | |
| TATCCAATGGGCAGGTTCTT+GGG | - | chr1_1:6323976-6323995 | Msa0003780:intron | 45.0% | |
| !! | TTGTTTGCCTCTCTGAAGTG+AGG | + | chr1_1:6324056-6324075 | None:intergenic | 45.0% |
| ! | ATTTAGTTCATGGCCTTGCC+TGG | - | chr1_1:6324379-6324398 | Msa0003780:five_prime_UTR | 45.0% |
| ! | TTTTCACTGCATTCCAGGCA+AGG | + | chr1_1:6324395-6324414 | None:intergenic | 45.0% |
| !! | ATAATAATAATGAATAATTA+AGG | + | chr1_1:6320790-6320809 | None:intergenic | 5.0% |
| !! | AATAATTGTATAAATTAAAA+AGG | + | chr1_1:6321651-6321670 | None:intergenic | 5.0% |
| !!! | ATTTTTTTTATCAATTAAAA+TGG | - | chr1_1:6323115-6323134 | Msa0003780:CDS | 5.0% |
| GGACTGACATGTTATGGGCT+GGG | + | chr1_1:6320592-6320611 | None:intergenic | 50.0% | |
| TGGACTGACATGTTATGGGC+TGG | + | chr1_1:6320593-6320612 | None:intergenic | 50.0% | |
| !! | ATGGGCATTGGTGAAGAAGC+AGG | - | chr1_1:6320953-6320972 | Msa0003780:CDS | 50.0% |
| CGTGAAGCTAAACTCAAGGG+TGG | - | chr1_1:6321717-6321736 | Msa0003780:intron | 50.0% | |
| !! | GCAGCTTTTGCGTTTGAGAC+AGG | - | chr1_1:6321936-6321955 | Msa0003780:intron | 50.0% |
| GAAGAGAGACAGACAGACGT+GGG | + | chr1_1:6323354-6323373 | None:intergenic | 50.0% | |
| TACCGTGAACATGCTCCACA+GGG | - | chr1_1:6323630-6323649 | Msa0003780:intron | 50.0% | |
| AACCCTGTGGAGCATGTTCA+CGG | + | chr1_1:6323635-6323654 | None:intergenic | 50.0% | |
| !! | ACCCTAATCTGAAGAGCGTC+AGG | - | chr1_1:6323677-6323696 | Msa0003780:intron | 50.0% |
| CCCTGACGCTCTTCAGATTA+GGG | + | chr1_1:6323681-6323700 | None:intergenic | 50.0% | |
| !! | CCCTAATCTGAAGAGCGTCA+GGG | - | chr1_1:6323678-6323697 | Msa0003780:intron | 50.0% |
| TCCCTGACGCTCTTCAGATT+AGG | + | chr1_1:6323682-6323701 | None:intergenic | 50.0% | |
| ACTGACGTTATCCAATGGGC+AGG | - | chr1_1:6323968-6323987 | Msa0003780:intron | 50.0% | |
| AGTTGGTCCTCACTTCAGAG+AGG | - | chr1_1:6324046-6324065 | Msa0003780:CDS | 50.0% | |
| GAGAGGCAAACAACTTCCTG+TGG | - | chr1_1:6324063-6324082 | Msa0003780:CDS | 50.0% | |
| CTTTGAGCTTGAAAGGCCAC+AGG | + | chr1_1:6324082-6324101 | None:intergenic | 50.0% | |
| !! | AGGGGAGCTTTGAGCTTGAA+AGG | + | chr1_1:6324089-6324108 | None:intergenic | 50.0% |
| TTCAAGCTCAAAGCTCCCCT+AGG | - | chr1_1:6324089-6324108 | Msa0003780:CDS | 50.0% | |
| ! | TATGTGGAAGGTGGTGATGC+TGG | - | chr1_1:6324137-6324156 | Msa0003780:CDS | 50.0% |
| ! | AAGGTGGTGATGCTGGAAAC+AGG | - | chr1_1:6324144-6324163 | Msa0003780:CDS | 50.0% |
| ! | AGGTGGTGATGCTGGAAACA+GGG | - | chr1_1:6324145-6324164 | Msa0003780:CDS | 50.0% |
| CTTGCCGCAGTAGATGGAGA+TGG | + | chr1_1:6320705-6320724 | None:intergenic | 55.0% | |
| CATCTCCATCTACTGCGGCA+AGG | - | chr1_1:6320703-6320722 | Msa0003780:three_prime_UTR | 55.0% | |
| GGAAGAGAGACAGACAGACG+TGG | + | chr1_1:6323355-6323374 | None:intergenic | 55.0% | |
| CTACCGTGAACATGCTCCAC+AGG | - | chr1_1:6323629-6323648 | Msa0003780:intron | 55.0% | |
| CTTCCCAAGAACCTGCCCAT+TGG | + | chr1_1:6323982-6324001 | None:intergenic | 55.0% | |
| AAGCTCAAAGCTCCCCTAGG+TGG | - | chr1_1:6324092-6324111 | Msa0003780:CDS | 55.0% | |
| GGGGCTACGGCAAAGTTGAC+AGG | - | chr1_1:6323716-6323735 | Msa0003780:intron | 60.0% | |
| GGGCAGGTTCTTGGGAAGCA+CGG | - | chr1_1:6323984-6324003 | Msa0003780:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1_1 | gene | 6320587 | 6324465 | 6320587 | ID=Msa0003780;Name=Msa0003780 |
| chr1_1 | mRNA | 6320587 | 6324465 | 6320587 | ID=Msa0003780-mRNA-1;Parent=Msa0003780;Name=Msa0003780-mRNA-1;_AED=0.06;_eAED=0.06;_QI=139|1|1|1|0.83|0.71|7|209|244 |
| chr1_1 | exon | 6320587 | 6320729 | 6320587 | ID=Msa0003780-mRNA-1:exon:2092;Parent=Msa0003780-mRNA-1 |
| chr1_1 | exon | 6320781 | 6321062 | 6320781 | ID=Msa0003780-mRNA-1:exon:2091;Parent=Msa0003780-mRNA-1 |
| chr1_1 | exon | 6321275 | 6321457 | 6321275 | ID=Msa0003780-mRNA-1:exon:2090;Parent=Msa0003780-mRNA-1 |
| chr1_1 | exon | 6323095 | 6323152 | 6323095 | ID=Msa0003780-mRNA-1:exon:2089;Parent=Msa0003780-mRNA-1 |
| chr1_1 | exon | 6323262 | 6323359 | 6323262 | ID=Msa0003780-mRNA-1:exon:2088;Parent=Msa0003780-mRNA-1 |
| chr1_1 | exon | 6323988 | 6324168 | 6323988 | ID=Msa0003780-mRNA-1:exon:2087;Parent=Msa0003780-mRNA-1 |
| chr1_1 | exon | 6324328 | 6324465 | 6324328 | ID=Msa0003780-mRNA-1:exon:2086;Parent=Msa0003780-mRNA-1 |
| chr1_1 | five_prime_UTR | 6324328 | 6324465 | 6324328 | ID=Msa0003780-mRNA-1:five_prime_utr;Parent=Msa0003780-mRNA-1 |
| chr1_1 | five_prime_UTR | 6324168 | 6324168 | 6324168 | ID=Msa0003780-mRNA-1:five_prime_utr;Parent=Msa0003780-mRNA-1 |
| chr1_1 | CDS | 6323988 | 6324167 | 6323988 | ID=Msa0003780-mRNA-1:cds;Parent=Msa0003780-mRNA-1 |
| chr1_1 | CDS | 6323262 | 6323359 | 6323262 | ID=Msa0003780-mRNA-1:cds;Parent=Msa0003780-mRNA-1 |
| chr1_1 | CDS | 6323095 | 6323152 | 6323095 | ID=Msa0003780-mRNA-1:cds;Parent=Msa0003780-mRNA-1 |
| chr1_1 | CDS | 6321275 | 6321457 | 6321275 | ID=Msa0003780-mRNA-1:cds;Parent=Msa0003780-mRNA-1 |
| chr1_1 | CDS | 6320847 | 6321062 | 6320847 | ID=Msa0003780-mRNA-1:cds;Parent=Msa0003780-mRNA-1 |
| chr1_1 | three_prime_UTR | 6320781 | 6320846 | 6320781 | ID=Msa0003780-mRNA-1:three_prime_utr;Parent=Msa0003780-mRNA-1 |
| chr1_1 | three_prime_UTR | 6320587 | 6320729 | 6320587 | ID=Msa0003780-mRNA-1:three_prime_utr;Parent=Msa0003780-mRNA-1 |
| Gene Sequence |
| Protein sequence |
