AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0922590

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922590 MtrunA17_Chr6g0480671 97.965 344 7 0 262 605 389 732 0.0 699
Msa0922590 MtrunA17_Chr6g0480671 94.297 263 15 0 1 263 1 263 0.0 533
Msa0922590 MtrunA17_Chr6g0481021 70.317 347 100 2 262 605 321 667 1.18e-155 464
Msa0922590 MtrunA17_Chr6g0481021 61.728 162 61 1 103 263 32 193 5.45e-58 207
Msa0922590 MtrunA17_Chr5g0395421 64.835 364 111 4 254 611 8 360 1.29e-150 439
Msa0922590 MtrunA17_Chr6g0480851 58.548 427 145 4 183 605 325 723 1.40e-144 437
Msa0922590 MtrunA17_Chr6g0480851 55.513 263 108 1 1 263 1 254 9.38e-94 305
Msa0922590 MtrunA17_Chr6g0480781 58.807 352 127 4 262 605 367 708 4.36e-131 402
Msa0922590 MtrunA17_Chr6g0480781 50.379 264 105 4 1 263 1 239 1.27e-77 262
Msa0922590 MtrunA17_Chr6g0480741 60.920 348 125 4 262 604 309 650 9.67e-128 391
Msa0922590 MtrunA17_Chr6g0480741 59.184 98 40 0 166 263 88 185 7.09e-30 125
Msa0922590 MtrunA17_Chr6g0480741 41.379 87 46 1 1 87 1 82 3.50e-13 72.8
Msa0922590 MtrunA17_Chr6g0480681 60.172 349 125 5 262 605 337 676 4.59e-124 384
Msa0922590 MtrunA17_Chr6g0480681 35.227 176 95 4 88 263 28 184 1.34e-23 105
Msa0922590 MtrunA17_Chr6g0480681 47.126 87 45 1 1 86 1 87 6.64e-18 87.8
Msa0922590 MtrunA17_Chr6g0480791 50.379 264 108 3 1 263 1 242 1.09e-81 259
Msa0922590 MtrunA17_Chr6g0480771 59.193 223 86 2 385 605 12 231 3.89e-76 244
Msa0922590 MtrunA17_Chr4g0001481 40.390 359 187 9 260 605 297 641 3.57e-74 252
Msa0922590 MtrunA17_Chr4g0073941 40.489 368 187 11 251 605 288 636 4.08e-73 249
Msa0922590 MtrunA17_Chr5g0395411 45.833 264 107 4 1 263 1 229 9.67e-66 219
Msa0922590 MtrunA17_Chr3g0126541 41.892 296 152 6 319 605 330 614 3.04e-65 227
Msa0922590 MtrunA17_Chr3g0126541 34.722 72 47 0 192 263 80 151 1.25e-11 67.8
Msa0922590 MtrunA17_Chr3g0125651 38.827 358 191 9 262 605 233 576 5.54e-65 226
Msa0922590 MtrunA17_Chr2g0305771 43.051 295 149 5 319 605 301 584 7.78e-65 225
Msa0922590 MtrunA17_Chr3g0139071 43.289 298 144 6 319 605 331 614 1.23e-64 226
Msa0922590 MtrunA17_Chr6g0480841 62.130 169 62 1 439 605 2 170 1.28e-63 209
Msa0922590 MtrunA17_Chr8g0347121 39.604 303 163 4 319 611 313 605 3.42e-63 221
Msa0922590 MtrunA17_Chr8g0347121 36.620 71 45 0 193 263 60 130 6.83e-11 65.5
Msa0922590 MtrunA17_Chr1g0181121 37.815 357 189 8 262 605 241 577 5.03e-63 220
Msa0922590 MtrunA17_Chr7g0228181 41.695 295 153 5 319 605 301 584 1.13e-62 219
Msa0922590 MtrunA17_Chr1g0158861 40.134 299 153 6 319 605 332 616 1.76e-61 217
Msa0922590 MtrunA17_Chr1g0158861 29.134 127 78 2 149 263 27 153 1.83e-12 70.5
Msa0922590 MtrunA17_Chr4g0028861 36.944 360 188 10 262 605 321 657 3.18e-61 215
Msa0922590 MtrunA17_Chr4g0028861 36.111 72 45 1 192 263 123 193 2.26e-11 67.0
Msa0922590 MtrunA17_Chr7g0275581 38.851 296 161 4 319 604 334 619 2.39e-59 211
Msa0922590 MtrunA17_Chr7g0275581 36.111 72 46 0 192 263 82 153 5.37e-11 65.9
Msa0922590 MtrunA17_Chr2g0326871 38.816 304 161 6 302 593 309 599 1.33e-57 206
Msa0922590 MtrunA17_Chr2g0326871 39.437 71 42 1 193 263 77 146 5.01e-12 68.9
Msa0922590 MtrunA17_Chr8g0360821 37.640 356 197 11 262 605 262 604 9.21e-57 203
Msa0922590 MtrunA17_Chr2g0318561 38.511 309 172 8 304 605 130 427 5.03e-55 194
Msa0922590 MtrunA17_Chr7g0218341 35.777 341 197 7 260 590 309 637 5.85e-50 184
Msa0922590 MtrunA17_Chr6g0480751 50.467 107 53 0 157 263 62 168 5.62e-28 112
Msa0922590 MtrunA17_Chr6g0480831 69.863 73 21 1 354 426 1 72 3.80e-19 82.0
Msa0922590 MtrunA17_Chr6g0480821 38.182 110 60 2 262 369 106 209 7.74e-16 77.0
Msa0922590 MtrunA17_Chr5g0434371 23.043 230 168 6 335 558 278 504 4.64e-12 69.3
Msa0922590 MtrunA17_Chr6g0480761 33.898 118 67 3 239 349 52 165 6.01e-12 65.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0922590 AT3G17700.1 71.802 344 92 2 262 605 390 728 5.71e-159 474
Msa0922590 AT3G17700.1 43.396 265 136 5 5 263 6 262 3.18e-60 214
Msa0922590 AT3G17690.1 66.279 344 110 3 262 605 356 693 1.51e-153 459
Msa0922590 AT3G17690.1 42.797 236 122 4 29 263 5 228 1.61e-52 192
Msa0922590 AT3G17700.2 73.519 287 71 2 262 548 390 671 8.08e-134 407
Msa0922590 AT3G17700.2 43.396 265 136 5 5 263 6 262 2.50e-60 213
Msa0922590 AT3G17690.2 67.021 282 89 2 262 543 356 633 6.21e-129 393
Msa0922590 AT3G17690.2 42.797 236 122 4 29 263 5 228 8.11e-53 192
Msa0922590 AT1G19780.2 41.530 366 184 10 254 605 78 427 2.11e-78 258
Msa0922590 AT1G19780.1 41.530 366 184 10 254 605 289 638 1.03e-76 259
Msa0922590 AT1G15990.1 40.650 369 183 11 254 605 283 632 1.52e-73 250
Msa0922590 AT4G30560.5 39.888 356 193 6 260 605 273 617 6.96e-72 245
Msa0922590 AT4G30560.2 39.888 356 193 6 260 605 273 617 6.96e-72 245
Msa0922590 AT4G30560.3 39.888 356 193 6 260 605 273 617 6.96e-72 245
Msa0922590 AT4G30560.1 39.888 356 193 6 260 605 299 643 1.40e-71 245
Msa0922590 AT4G30560.4 39.888 356 193 6 260 605 299 643 1.40e-71 245
Msa0922590 AT5G57940.3 39.889 361 186 10 260 605 277 621 8.43e-71 242
Msa0922590 AT5G57940.1 39.612 361 187 9 260 605 284 628 9.45e-71 242
Msa0922590 AT5G57940.2 39.612 361 187 9 260 605 284 628 9.45e-71 242
Msa0922590 AT2G23980.3 35.491 448 241 13 183 605 243 667 1.23e-70 243
Msa0922590 AT2G23980.2 35.491 448 241 13 183 605 243 667 1.23e-70 243
Msa0922590 AT2G23980.8 35.491 448 241 13 183 605 243 667 1.23e-70 243
Msa0922590 AT2G23980.7 35.491 448 241 13 183 605 243 667 1.23e-70 243
Msa0922590 AT2G23980.6 39.674 368 178 10 260 605 272 617 1.51e-70 242
Msa0922590 AT2G23980.9 39.674 368 178 10 260 605 299 644 1.93e-70 242
Msa0922590 AT2G23980.10 39.674 368 178 10 260 605 299 644 1.93e-70 242
Msa0922590 AT2G23980.1 39.674 368 178 10 260 605 299 644 1.93e-70 242
Msa0922590 AT2G23980.4 39.674 368 178 10 260 605 299 644 1.93e-70 242
Msa0922590 AT2G23980.5 39.674 368 178 10 260 605 299 644 1.93e-70 242
Msa0922590 AT4G01010.1 38.764 356 193 9 260 605 264 604 7.57e-68 234
Msa0922590 AT4G01010.2 38.764 356 193 9 260 605 264 604 7.57e-68 234
Msa0922590 AT4G30360.1 38.462 364 179 10 262 605 273 611 5.92e-67 232
Msa0922590 AT5G53130.1 42.761 297 148 7 319 605 332 616 7.59e-67 232
Msa0922590 AT1G01340.1 42.568 296 150 6 319 605 314 598 9.96e-67 231
Msa0922590 AT1G01340.2 42.568 296 150 6 319 605 319 603 1.16e-66 231
Msa0922590 AT2G28260.2 38.920 352 173 9 260 593 223 550 9.16e-65 224
Msa0922590 AT2G28260.1 38.920 352 173 9 260 593 263 590 1.33e-64 225
Msa0922590 AT2G24610.1 41.695 295 153 5 319 605 328 611 3.46e-61 216
Msa0922590 AT2G24610.2 42.034 295 152 6 319 605 343 626 5.55e-61 216
Msa0922590 AT2G46430.1 33.565 432 250 10 190 605 195 605 1.46e-60 214
Msa0922590 AT2G46430.2 33.565 432 250 10 190 605 195 605 1.46e-60 214
Msa0922590 AT3G48010.1 37.845 362 190 11 262 605 243 587 2.78e-60 214
Msa0922590 AT5G14870.1 32.719 434 242 10 186 605 182 579 2.91e-60 213
Msa0922590 AT3G17690.3 62.424 165 58 2 262 426 356 516 1.05e-58 205
Msa0922590 AT3G17690.3 42.797 236 122 4 29 263 5 228 3.48e-53 190
Msa0922590 AT5G54250.2 35.211 355 206 11 262 605 284 625 4.11e-52 191
Msa0922590 AT5G54250.2 37.500 72 45 0 192 263 78 149 9.95e-12 68.6
Msa0922590 AT5G54250.1 35.211 355 206 11 262 605 284 625 4.11e-52 191
Msa0922590 AT5G54250.1 37.500 72 45 0 192 263 78 149 9.95e-12 68.6
Msa0922590 AT5G54250.4 35.211 355 206 11 262 605 284 625 4.11e-52 191
Msa0922590 AT5G54250.4 37.500 72 45 0 192 263 78 149 9.95e-12 68.6
Msa0922590 AT5G15410.1 35.174 344 198 7 260 590 314 645 6.04e-50 185
Msa0922590 AT5G15410.2 35.174 344 198 7 260 590 313 644 1.02e-49 184
Msa0922590 AT5G54250.3 34.648 355 203 12 262 605 284 620 1.32e-48 181
Msa0922590 AT5G54250.3 37.500 72 45 0 192 263 78 149 9.57e-12 68.6
Msa0922590 AT2G46450.3 34.174 357 182 12 262 595 188 514 2.02e-46 173
Msa0922590 AT2G46450.2 34.174 357 182 12 262 595 201 527 2.14e-46 173
Msa0922590 AT2G46450.4 34.174 357 182 12 262 595 224 550 3.36e-46 173
Msa0922590 AT2G46450.1 34.174 357 182 12 262 595 224 550 3.36e-46 173
Msa0922590 AT2G46440.2 36.043 369 187 13 262 607 46 388 2.31e-45 167
Msa0922590 AT2G46440.1 36.043 369 187 12 262 607 224 566 2.34e-44 167

Find 127 sgRNAs with CRISPR-Local

Find 386 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATATGTATATTCATCATTT+TGG 0.038484 6_2:+61277183 Msa0922590:CDS
CTTCAAGGTCAGCTGCTCTT+AGG 0.221111 6_2:-61279603 None:intergenic
AGTTAAGAACAATACATTTA+TGG 0.225920 6_2:-61275187 None:intergenic
CTTGATGGATGATCCTATTC+TGG 0.259016 6_2:+61278800 Msa0922590:CDS
TCAGGGTCATTTGACTGTTT+TGG 0.269855 6_2:-61273930 None:intergenic
CTTAACCCTTAGTCTCATTC+AGG 0.276645 6_2:+61272756 None:intergenic
TTCTTCAAGCTCTTGGAAAA+AGG 0.291731 6_2:+61278096 Msa0922590:CDS
GTGTCCTAGGTACAAGATTC+TGG 0.292678 6_2:-61273965 None:intergenic
CAATGATTCCCATCGTAAAA+AGG 0.298027 6_2:-61278025 None:intergenic
CAAAACTTTCTTCAAGCTCT+TGG 0.312680 6_2:+61278089 Msa0922590:CDS
TTTCCTGAATATTATTCTTC+AGG 0.317245 6_2:+61275262 Msa0922590:CDS
CTACCTGAAGAATAATATTC+AGG 0.335391 6_2:-61275265 None:intergenic
ATATCCCTCTGAAGATCTTC+TGG 0.337480 6_2:-61278628 None:intergenic
ACGATGGGAATCATTGGATT+AGG 0.345089 6_2:+61278032 Msa0922590:CDS
CAGTTTCAGAATATTCTCTA+TGG 0.345130 6_2:+61274904 Msa0922590:intron
ACAAAGAATGAAGGATTCAT+AGG 0.347434 6_2:-61272804 None:intergenic
TTTATTAAGATCTGGTCAAT+TGG 0.348648 6_2:+61274262 Msa0922590:CDS
TCCTCAAGAATCTTGCAAAA+AGG 0.354000 6_2:-61279636 None:intergenic
CTTCTTGCTATCTGTGGATA+AGG 0.358848 6_2:+61275077 Msa0922590:CDS
AGGGATCAGATTGGGCTCAT+TGG 0.385371 6_2:+61277057 Msa0922590:CDS
AACTCAAAACCTCCTAAAAC+TGG 0.395532 6_2:-61272916 None:intergenic
TTCAAGGTCAGCTGCTCTTA+GGG 0.399648 6_2:-61279602 None:intergenic
ATTACCAGGCTTCAAATAGT+TGG 0.403211 6_2:+61272864 Msa0922590:intron
AAATTAGTATCCCTTTCATA+TGG 0.407197 6_2:-61274026 None:intergenic
TTGAGGAGTCCTGGTGTTCA+AGG 0.408867 6_2:+61279652 Msa0922590:CDS
TTCTGCCCGAAAAGATTTCC+AGG 0.409816 6_2:-61274131 None:intergenic
GACAAGCTGAACGTTACAAC+TGG 0.410522 6_2:+61278560 Msa0922590:CDS
TTATTAAGATCTGGTCAATT+GGG 0.413011 6_2:+61274263 Msa0922590:CDS
TGAGTAGCCTTGAAGTAAGT+TGG 0.415047 6_2:-61274317 None:intergenic
TACTTGTCCAACTTACTTCA+AGG 0.421951 6_2:+61274310 Msa0922590:CDS
GGTGTATGAGTAACATATAA+TGG 0.422666 6_2:-61274110 None:intergenic
TGTTCATTCATGCCACATAA+AGG 0.423457 6_2:-61274203 None:intergenic
TTGTCTTAGTCTCTCACAAA+TGG 0.427146 6_2:-61278826 None:intergenic
GCAAGATTCTTGAGGAGTCC+TGG 0.431788 6_2:+61279643 Msa0922590:CDS
TTCTATTCCCATGACTCCTA+TGG 0.433012 6_2:+61274001 Msa0922590:CDS
TCACAAATGGCGTCCAGAAT+AGG 0.438593 6_2:-61278813 None:intergenic
AATGAACATTTATTAAGATC+TGG 0.440670 6_2:+61274254 Msa0922590:CDS
ATAATAAACTTGTACATCAA+TGG 0.444677 6_2:+61274998 Msa0922590:CDS
AGTGCTTGTTTCACAGAAGA+TGG 0.448961 6_2:+61277098 Msa0922590:CDS
TTGGAGAGTATTGGTGAAGA+TGG 0.449435 6_2:+61278927 Msa0922590:CDS
AAAGGCTTGTAACTTCTTCA+AGG 0.452649 6_2:-61279618 None:intergenic
TCTCTTTAGATTTGTTAAGA+AGG 0.453607 6_2:+61278660 Msa0922590:CDS
AGGGACACACAGGTCCTCTA+AGG 0.453789 6_2:+61274051 Msa0922590:CDS
GGATTAGCATCTGACAGAAT+CGG 0.453968 6_2:-61273909 None:intergenic
TGTCAGTTGCAGCTCCAAAC+AGG 0.455342 6_2:+61272958 Msa0922590:five_prime_UTR
TAAGAGAGTAAAGACCTGTT+TGG 0.458977 6_2:-61272972 None:intergenic
AATCATGGAAGAAAAGTAAG+AGG 0.459442 6_2:-61272844 None:intergenic
ACATATAATGGACCACTCAT+TGG 0.460725 6_2:-61274098 None:intergenic
TGATGTACAAGTTTATTATG+TGG 0.462975 6_2:-61274994 None:intergenic
GATCATCTGCTAAGCGCCTA+TGG 0.464031 6_2:-61278363 None:intergenic
TTGCTAACAAGCCTTTGTCT+TGG 0.464265 6_2:-61279541 None:intergenic
CTATGGTGATGCAAAGGATT+GGG 0.464445 6_2:+61274921 Msa0922590:CDS
TGACAAGATACTATCAAAGT+TGG 0.465408 6_2:-61272940 None:intergenic
TTCTGGAATCTAGAACCGTC+AGG 0.465476 6_2:-61273948 None:intergenic
AAGCACTCAGGAATATCAAA+AGG 0.467226 6_2:+61277037 Msa0922590:CDS
AAACTCATTGATTGTGGTCA+TGG 0.469014 6_2:+61277014 Msa0922590:CDS
CAGATTTATACAAAGAATGA+AGG 0.473612 6_2:-61272813 None:intergenic
CAAACATTGCCTTCAGATAG+AGG 0.476731 6_2:-61278960 None:intergenic
CTATCTGAAGGCAATGTTTG+TGG 0.482506 6_2:+61278963 Msa0922590:CDS
TGAAAGGGATACTAATTTCA+AGG 0.489370 6_2:+61274031 Msa0922590:CDS
CACTGGTTTGCTCATTGGCA+CGG 0.491273 6_2:-61274159 None:intergenic
CTGGTGTTCAAGGAGCCATT+AGG 0.494541 6_2:+61279662 Msa0922590:CDS
ATATCAAAAGGGATCAGATT+GGG 0.495634 6_2:+61277049 Msa0922590:CDS
GAAGGATTCATAGGGTGAGT+GGG 0.497898 6_2:-61272795 None:intergenic
TTCGAGTCTGTTCAATCCTA+AGG 0.498305 6_2:+61274358 Msa0922590:CDS
TCCTATGGAACCATATGAAA+GGG 0.503658 6_2:+61274016 Msa0922590:CDS
AGAATGCCTCCACATTTGTT+AGG 0.505909 6_2:-61279579 None:intergenic
AGTGAATGAAGAACTACTCA+TGG 0.506027 6_2:+61278597 Msa0922590:CDS
TCTATGGTGATGCAAAGGAT+TGG 0.514601 6_2:+61274920 Msa0922590:CDS
GACAAAGGCTTGTTAGCAAT+AGG 0.514814 6_2:+61279545 Msa0922590:CDS
TTATGTGGATTTATAACTCT+AGG 0.514938 6_2:-61274979 None:intergenic
ATCGATACACTTCGTGTCCT+AGG 0.516359 6_2:-61273978 None:intergenic
TGTGCAGCAAATTAGTACTC+TGG 0.517279 6_2:+61277965 Msa0922590:intron
CAAAGAATGAAGGATTCATA+GGG 0.525986 6_2:-61272803 None:intergenic
CCAGGCTTCAAATAGTTGGA+TGG 0.526953 6_2:+61272868 Msa0922590:intron
AATATCAAAAGGGATCAGAT+TGG 0.529520 6_2:+61277048 Msa0922590:CDS
TCCCTTTCATATGGTTCCAT+AGG 0.532967 6_2:-61274017 None:intergenic
ATATGGTTCCATAGGAGTCA+TGG 0.537895 6_2:-61274009 None:intergenic
GATTCCAGAATCTTGTACCT+AGG 0.542494 6_2:+61273961 Msa0922590:CDS
CTAATGGCTCCTTGAACACC+AGG 0.548985 6_2:-61279661 None:intergenic
TGAAGGATTCATAGGGTGAG+TGG 0.549116 6_2:-61272796 None:intergenic
CTCCTATGGAACCATATGAA+AGG 0.550668 6_2:+61274015 Msa0922590:CDS
CAGCAAATTAGTACTCTGGC+GGG 0.552447 6_2:+61277969 Msa0922590:intron
AGGACAAAGAGAATACCTAA+TGG 0.555774 6_2:-61279677 None:intergenic
ACTTCCCAAATAAAATAGCT+TGG 0.555830 6_2:-61278002 None:intergenic
TTGAGCAATGGATGAGCCAT+AGG 0.558229 6_2:+61278347 Msa0922590:CDS
TGGTGTCTTGAGCATACCTC+AGG 0.559284 6_2:+61279002 Msa0922590:CDS
TATGGTTCCATAGGAGTCAT+GGG 0.563997 6_2:-61274008 None:intergenic
CGTGGAAAATTGGAGAGTAT+TGG 0.564772 6_2:+61278918 Msa0922590:CDS
GTGGTGAGGAACTTCTTACA+TGG 0.575137 6_2:+61278982 Msa0922590:CDS
GTTGGACAAGTAGTACAGTA+AGG 0.575654 6_2:-61274299 None:intergenic
AATCTAACCTTTGTTTCCTG+AGG 0.576688 6_2:-61279018 None:intergenic
TGGTGGCTTAGTAGAGAAGG+TGG 0.577105 6_2:+61278884 Msa0922590:CDS
AGCACTCAGGAATATCAAAA+GGG 0.581873 6_2:+61277038 Msa0922590:CDS
ATTCGAGTTCCTCTATCTGA+AGG 0.584225 6_2:+61278951 Msa0922590:CDS
CAGAATAGGATCATCCATCA+AGG 0.584944 6_2:-61278799 None:intergenic
AATCACAATTTCATAAACAT+AGG 0.587149 6_2:-61279697 None:intergenic
AAGGATTCATAGGGTGAGTG+GGG 0.589269 6_2:-61272794 None:intergenic
ACTAATTTCAAGGGACACAC+AGG 0.589893 6_2:+61274041 Msa0922590:CDS
GAAAGGGATACTAATTTCAA+GGG 0.590743 6_2:+61274032 Msa0922590:CDS
AAACAAGAATTCCAAGACAA+AGG 0.592365 6_2:+61279530 Msa0922590:CDS
AGTATTGTGCCTAACAAATG+TGG 0.596023 6_2:+61279570 Msa0922590:CDS
ATTTGCCAGAAGATCTTCAG+AGG 0.597220 6_2:+61278623 Msa0922590:CDS
TTATATGTTACTCATACACC+TGG 0.597765 6_2:+61274113 Msa0922590:CDS
TTTATAACTCTAGGTACATG+TGG 0.602488 6_2:-61274970 None:intergenic
ATCATGGAAGAAAAGTAAGA+GGG 0.606065 6_2:-61272843 None:intergenic
TACAACTGGGCTGCAACGAG+AGG 0.606077 6_2:+61278574 Msa0922590:CDS
GGTTTGCAGAATAACAATGC+TGG 0.606356 6_2:+61274227 Msa0922590:CDS
GCTTCATTTAATCCAATGAG+TGG 0.607338 6_2:+61274086 Msa0922590:CDS
AAAATCCTGAATGAGACTAA+GGG 0.609940 6_2:-61272761 None:intergenic
TATTCTCTATGGTGATGCAA+AGG 0.611058 6_2:+61274915 Msa0922590:CDS
GAGCATACCTCAGGAAACAA+AGG 0.620718 6_2:+61279011 Msa0922590:CDS
TTGTGGTCATGGAAGCACTC+AGG 0.623499 6_2:+61277025 Msa0922590:CDS
GACAACGCGATGTTGAGCAA+TGG 0.624136 6_2:+61278335 Msa0922590:CDS
TGCTCAAAACTCATTGATTG+TGG 0.634186 6_2:+61277008 Msa0922590:CDS
GCAGCAAATTAGTACTCTGG+CGG 0.635016 6_2:+61277968 Msa0922590:intron
TGATGGTGGCTTAGTAGAGA+AGG 0.636021 6_2:+61278881 Msa0922590:CDS
GCTTAGCAGATGATCTGAGA+AGG 0.650187 6_2:+61278371 Msa0922590:CDS
TTTGCCAGAAGATCTTCAGA+GGG 0.654562 6_2:+61278624 Msa0922590:CDS
TCTGGAATCTAGAACCGTCA+GGG 0.657585 6_2:-61273947 None:intergenic
TTATGTGGCATGAATGAACA+TGG 0.660239 6_2:+61274206 Msa0922590:CDS
ACAAGCTGAACGTTACAACT+GGG 0.661635 6_2:+61278561 Msa0922590:CDS
GCAGATTTGTGAACACAACA+TGG 0.667059 6_2:+61273863 Msa0922590:intron
AAACAGTCAAATGACCCTGA+CGG 0.675231 6_2:+61273933 Msa0922590:CDS
ATTGTGCCTAACAAATGTGG+AGG 0.678382 6_2:+61279573 Msa0922590:CDS
TGAAGGCAATGTTTGTGGTG+AGG 0.703863 6_2:+61278968 Msa0922590:CDS
GGCTGAGTTTGATAGTGACG+AGG 0.752528 6_2:+61273884 Msa0922590:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTTGAAAATCAAAATTATA+AGG - chr6_2:61275454-61275473 None:intergenic 10.0%
!!! ATTTTAATCTTATAATCTTA+AGG + chr6_2:61278730-61278749 Msa0922590:intron 10.0%
!! AAATATGAAAAGAAAAAGTA+TGG - chr6_2:61273433-61273452 None:intergenic 15.0%
!!! TAACATAACTAATGATTTTA+AGG - chr6_2:61273741-61273760 None:intergenic 15.0%
!!! AATGTATATTTTGATGAAAT+AGG + chr6_2:61274557-61274576 Msa0922590:intron 15.0%
!! AATATTTGAATCTAAATAGA+GGG - chr6_2:61275115-61275134 None:intergenic 15.0%
!! AAATTAGTCATGTAATTAAA+AGG - chr6_2:61275303-61275322 None:intergenic 15.0%
!!! ATAAAAATGATTAGTTATAG+AGG - chr6_2:61275381-61275400 None:intergenic 15.0%
!! TGAAAGAGAAAAAAAAAAAA+CGG - chr6_2:61276467-61276486 None:intergenic 15.0%
!!! ATATGTATATTCATCATTTT+GGG + chr6_2:61277184-61277203 Msa0922590:CDS 15.0%
!! TATGTTGAATTATATTTGAA+GGG - chr6_2:61277393-61277412 None:intergenic 15.0%
!!! TAGAATAATTTTCAAATTCT+AGG - chr6_2:61277815-61277834 None:intergenic 15.0%
!! AAACATGTTATTACTTATTA+AGG - chr6_2:61278271-61278290 None:intergenic 15.0%
!!! CTTATATTTCATTTTCTTAA+AGG + chr6_2:61278293-61278312 Msa0922590:intron 15.0%
!!! ACATAAATGTTATTTAAGAA+AGG - chr6_2:61278409-61278428 None:intergenic 15.0%
!! TTCTTAAATAACATTTATGT+AGG + chr6_2:61278409-61278428 Msa0922590:intron 15.0%
!! AATATGTTGAAAACAGTTTA+TGG - chr6_2:61273103-61273122 None:intergenic 20.0%
!!! AGTTTCTAATTATTTTTGGA+GGG - chr6_2:61273580-61273599 None:intergenic 20.0%
!!! GTTGAGTTTCTAATTATTTT+TGG - chr6_2:61273584-61273603 None:intergenic 20.0%
!! ATAAGTATAACATATAGTAG+TGG - chr6_2:61273651-61273670 None:intergenic 20.0%
!! AATGAACATTTATTAAGATC+TGG + chr6_2:61274254-61274273 Msa0922590:CDS 20.0%
!!! AAGAATAGTATGTTTTAAGA+AGG - chr6_2:61274386-61274405 None:intergenic 20.0%
!!! ACTATTCTTTCTTTTAGTAT+AGG + chr6_2:61274397-61274416 Msa0922590:intron 20.0%
!! ATAATAAACTTGTACATCAA+TGG + chr6_2:61274998-61275017 Msa0922590:CDS 20.0%
!! ATATTTGAATCTAAATAGAG+GGG - chr6_2:61275114-61275133 None:intergenic 20.0%
!! CAATATTTGAATCTAAATAG+AGG - chr6_2:61275116-61275135 None:intergenic 20.0%
!! AGTTAAGAACAATACATTTA+TGG - chr6_2:61275190-61275209 None:intergenic 20.0%
!!! ATGGATGTATTTTATGTTTA+AGG - chr6_2:61275486-61275505 None:intergenic 20.0%
!! GGATAAACAATTTAATTAAG+CGG + chr6_2:61275991-61276010 Msa0922590:intron 20.0%
!! GGGAAAATTATTATGAATAA+CGG - chr6_2:61276440-61276459 None:intergenic 20.0%
!! AAAGAGAAAAAAAAAAAACG+GGG - chr6_2:61276465-61276484 None:intergenic 20.0%
!! GAAAGAGAAAAAAAAAAAAC+GGG - chr6_2:61276466-61276485 None:intergenic 20.0%
!! TATCACTGTTATATTACTTT+CGG + chr6_2:61276898-61276917 Msa0922590:intron 20.0%
!!! GATATGTATATTCATCATTT+TGG + chr6_2:61277183-61277202 Msa0922590:CDS 20.0%
!!! TATGTATATTCATCATTTTG+GGG + chr6_2:61277185-61277204 Msa0922590:CDS 20.0%
!! GTATGTTGAATTATATTTGA+AGG - chr6_2:61277394-61277413 None:intergenic 20.0%
!! AATATAATTCAACATACTTC+AGG + chr6_2:61277397-61277416 Msa0922590:intron 20.0%
!! AACTTATATTTACATTGTTC+TGG - chr6_2:61277747-61277766 None:intergenic 20.0%
!! TAAGATATTCAATTTAGCTA+TGG + chr6_2:61277872-61277891 Msa0922590:intron 20.0%
!! AAATACTGACATATAAAAAG+TGG - chr6_2:61278244-61278263 None:intergenic 20.0%
!!! ATATTTCATTTTCTTAAAGG+AGG + chr6_2:61278296-61278315 Msa0922590:intron 20.0%
!!! AATTGCCATTTATATATTGT+AGG + chr6_2:61278764-61278783 Msa0922590:intron 20.0%
!! AGACAAAAAATTTACATCAA+AGG + chr6_2:61278843-61278862 Msa0922590:CDS 20.0%
!!! ATTATTTCTTTTAGTCATAC+AGG + chr6_2:61279448-61279467 Msa0922590:intron 20.0%
! CAGATTTATACAAAGAATGA+AGG - chr6_2:61272816-61272835 None:intergenic 25.0%
! GTTGTTTATTTGTGTTAACT+TGG + chr6_2:61272995-61273014 Msa0922590:intron 25.0%
!!! GAGTTTCTAATTATTTTTGG+AGG - chr6_2:61273581-61273600 None:intergenic 25.0%
!! ATACTTATCTCTTTGTTTAG+TGG + chr6_2:61273663-61273682 Msa0922590:intron 25.0%
!!! TTTTTTGCGACAACTATTTA+AGG + chr6_2:61273783-61273802 Msa0922590:intron 25.0%
!! TTTTTGCGACAACTATTTAA+GGG + chr6_2:61273784-61273803 Msa0922590:intron 25.0%
! AAATTAGTATCCCTTTCATA+TGG - chr6_2:61274029-61274048 None:intergenic 25.0%
! ACTGAAAAATTTCCTTTATG+TGG + chr6_2:61274191-61274210 Msa0922590:CDS 25.0%
! TTTATTAAGATCTGGTCAAT+TGG + chr6_2:61274262-61274281 Msa0922590:CDS 25.0%
! TTATTAAGATCTGGTCAATT+GGG + chr6_2:61274263-61274282 Msa0922590:CDS 25.0%
! AAAATAAGCCCTAAATACAT+AGG - chr6_2:61274476-61274495 None:intergenic 25.0%
!!! TTTCCCTTTTAAGAATTTTG+AGG - chr6_2:61274679-61274698 None:intergenic 25.0%
!! TAATGTCTTAAATGCAGTTT+TGG - chr6_2:61274758-61274777 None:intergenic 25.0%
! TGTTCTCATTATCATTATCT+AGG + chr6_2:61274841-61274860 Msa0922590:intron 25.0%
! TTATGTGGATTTATAACTCT+AGG - chr6_2:61274982-61275001 None:intergenic 25.0%
! TGATGTACAAGTTTATTATG+TGG - chr6_2:61274997-61275016 None:intergenic 25.0%
!!! ATTTTTTGCAATTTGTTGCT+TGG + chr6_2:61275026-61275045 Msa0922590:CDS 25.0%
! GATAGCAAGAAGAAAAATAA+TGG - chr6_2:61275069-61275088 None:intergenic 25.0%
! TATTTGAATCTAAATAGAGG+GGG - chr6_2:61275113-61275132 None:intergenic 25.0%
! TTTCCTGAATATTATTCTTC+AGG + chr6_2:61275262-61275281 Msa0922590:CDS 25.0%
! AATAACAATACAGAATCAAC+AGG - chr6_2:61275337-61275356 None:intergenic 25.0%
!! AAATGATTAGTTATAGAGGA+AGG - chr6_2:61275377-61275396 None:intergenic 25.0%
!!! TGATCTGATCATTTTTCTTA+TGG - chr6_2:61275505-61275524 None:intergenic 25.0%
! AATAAGCTGAAAACAGTTTA+TGG + chr6_2:61276127-61276146 Msa0922590:intron 25.0%
!! GTATTGTAGAAAGTATACTT+GGG - chr6_2:61276255-61276274 None:intergenic 25.0%
!! TGTATTGTAGAAAGTATACT+TGG - chr6_2:61276256-61276275 None:intergenic 25.0%
! CAATACAAAGTAATGTAGAT+TGG + chr6_2:61276269-61276288 Msa0922590:intron 25.0%
!! GAACATTAGATTTTGTAGTA+AGG - chr6_2:61277157-61277176 None:intergenic 25.0%
!! GGAATACCATTTTCTAATTA+TGG + chr6_2:61277518-61277537 Msa0922590:intron 25.0%
! TTTATGGAATTTCAGATTTG+TGG - chr6_2:61277770-61277789 None:intergenic 25.0%
! ATGATTTCACTTAAGGTTTA+TGG - chr6_2:61277786-61277805 None:intergenic 25.0%
!! CACATTATTGAAGTTTTCTT+CGG + chr6_2:61277847-61277866 Msa0922590:intron 25.0%
!!! TCTCTTTAGATTTGTTAAGA+AGG + chr6_2:61278660-61278679 Msa0922590:CDS 25.0%
! TCGAACCTACAATATATAAA+TGG - chr6_2:61278772-61278791 None:intergenic 25.0%
! AAATTGTTCCATAATATGTC+AGG - chr6_2:61279162-61279181 None:intergenic 25.0%
! TTAGCTTCTTAGTATCTATT+TGG - chr6_2:61279259-61279278 None:intergenic 25.0%
! TTAGAAAAGAAACAGTTTAG+TGG - chr6_2:61279358-61279377 None:intergenic 25.0%
!! TAAAGTTGTTAACTTTTGCA+AGG - chr6_2:61279483-61279502 None:intergenic 25.0%
AAAATCCTGAATGAGACTAA+GGG - chr6_2:61272764-61272783 None:intergenic 30.0%
AAAAATCCTGAATGAGACTA+AGG - chr6_2:61272765-61272784 None:intergenic 30.0%
CAAAGAATGAAGGATTCATA+GGG - chr6_2:61272806-61272825 None:intergenic 30.0%
ACAAAGAATGAAGGATTCAT+AGG - chr6_2:61272807-61272826 None:intergenic 30.0%
ATCATGGAAGAAAAGTAAGA+GGG - chr6_2:61272846-61272865 None:intergenic 30.0%
AATCATGGAAGAAAAGTAAG+AGG - chr6_2:61272847-61272866 None:intergenic 30.0%
TGACAAGATACTATCAAAGT+TGG - chr6_2:61272943-61272962 None:intergenic 30.0%
TATAAACACGTGAGACTATT+TGG + chr6_2:61273059-61273078 Msa0922590:intron 30.0%
ACTAACAAAAGCAAGCAAAA+GGG - chr6_2:61273275-61273294 None:intergenic 30.0%
! CATGAATAGTGTTGTTCAAT+TGG + chr6_2:61273353-61273372 Msa0922590:intron 30.0%
!! CTTTAGTCTTTTATGAAGTG+TGG + chr6_2:61273504-61273523 Msa0922590:intron 30.0%
! TTTTGCGACAACTATTTAAG+GGG + chr6_2:61273785-61273804 Msa0922590:intron 30.0%
TGAAAGGGATACTAATTTCA+AGG + chr6_2:61274031-61274050 Msa0922590:CDS 30.0%
GAAAGGGATACTAATTTCAA+GGG + chr6_2:61274032-61274051 Msa0922590:CDS 30.0%
GGTGTATGAGTAACATATAA+TGG - chr6_2:61274113-61274132 None:intergenic 30.0%
TTATATGTTACTCATACACC+TGG + chr6_2:61274113-61274132 Msa0922590:CDS 30.0%
!! TTTTCAGTCTTACTTTTCAC+TGG - chr6_2:61274179-61274198 None:intergenic 30.0%
!!! ATGTTTTAAGAAGGTACCTT+AGG - chr6_2:61274377-61274396 None:intergenic 30.0%
ATAGTGTCTAGCATCAAATT+TGG + chr6_2:61274514-61274533 Msa0922590:intron 30.0%
TCAGCCTCAAAATTCTTAAA+AGG + chr6_2:61274672-61274691 Msa0922590:intron 30.0%
CAGCCTCAAAATTCTTAAAA+GGG + chr6_2:61274673-61274692 Msa0922590:intron 30.0%
AAAGCCGAACATTTAGAAAT+AGG + chr6_2:61274697-61274716 Msa0922590:intron 30.0%
!! TTCGCCTATTTCTAAATGTT+CGG - chr6_2:61274704-61274723 None:intergenic 30.0%
!! TTTTGTGTCATTCGTGATTT+TGG - chr6_2:61274727-61274746 None:intergenic 30.0%
CAGTTTCAGAATATTCTCTA+TGG + chr6_2:61274904-61274923 Msa0922590:intron 30.0%
TTTATAACTCTAGGTACATG+TGG - chr6_2:61274973-61274992 None:intergenic 30.0%
!! ATTTTTCTTCTTGCTATCTG+TGG + chr6_2:61275071-61275090 Msa0922590:CDS 30.0%
ATTTGAATCTAAATAGAGGG+GGG - chr6_2:61275112-61275131 None:intergenic 30.0%
TATTGCATATTGTTCTATGC+AGG + chr6_2:61275163-61275182 Msa0922590:intron 30.0%
CTACCTGAAGAATAATATTC+AGG - chr6_2:61275268-61275287 None:intergenic 30.0%
!! ATCATTTTTGTGTAGAAGAG+AGG + chr6_2:61275698-61275717 Msa0922590:intron 30.0%
GAGGAATGATAAGTATATCT+TGG + chr6_2:61275717-61275736 Msa0922590:intron 30.0%
TAAACTGCAAAGAATGAACT+TGG - chr6_2:61275780-61275799 None:intergenic 30.0%
AAGTTCATTCTTTGCAGTTT+AGG + chr6_2:61275779-61275798 Msa0922590:intron 30.0%
!! TAGTGAAGAGCTATTTTCTT+AGG - chr6_2:61275862-61275881 None:intergenic 30.0%
GATACACAATAAGCAACAAA+GGG - chr6_2:61275955-61275974 None:intergenic 30.0%
TGCTTATTGTGTATCGTATA+AGG + chr6_2:61275960-61275979 Msa0922590:intron 30.0%
TTCAAATTAGACTGTCTGTT+TGG - chr6_2:61276222-61276241 None:intergenic 30.0%
! AGTTTGACTTTGTAACTTCA+AGG + chr6_2:61276365-61276384 Msa0922590:intron 30.0%
! GTTTGACTTTGTAACTTCAA+GGG + chr6_2:61276366-61276385 Msa0922590:intron 30.0%
GAAAAAAAAAAAACGGGGAA+GGG - chr6_2:61276460-61276479 None:intergenic 30.0%
AGAAAAAAAAAAAACGGGGA+AGG - chr6_2:61276461-61276480 None:intergenic 30.0%
ATACTACAATCTCCTTATCA+TGG + chr6_2:61276499-61276518 Msa0922590:intron 30.0%
CATTGCATTAAACCATGATA+AGG - chr6_2:61276514-61276533 None:intergenic 30.0%
TTTGTCATTCCAAAACACTT+GGG + chr6_2:61276558-61276577 Msa0922590:intron 30.0%
CAGTTGGATAAATTAGCATT+GGG - chr6_2:61276665-61276684 None:intergenic 30.0%
TAAGCTCAAATGATAATTGC+TGG - chr6_2:61276821-61276840 None:intergenic 30.0%
AATATCAAAAGGGATCAGAT+TGG + chr6_2:61277048-61277067 Msa0922590:CDS 30.0%
ATATCAAAAGGGATCAGATT+GGG + chr6_2:61277049-61277068 Msa0922590:CDS 30.0%
TTTCCTAGTTACGAAAATTG+AGG + chr6_2:61277289-61277308 Msa0922590:intron 30.0%
TATAAATGATTGGGAGAAAC+AGG - chr6_2:61277368-61277387 None:intergenic 30.0%
! TGAAGGGAGTATAAATGATT+GGG - chr6_2:61277377-61277396 None:intergenic 30.0%
! TTGAAGGGAGTATAAATGAT+TGG - chr6_2:61277378-61277397 None:intergenic 30.0%
! GCTCTAAATGATTTCACTTA+AGG - chr6_2:61277793-61277812 None:intergenic 30.0%
AATTCTACTAATGCTATGAC+TGG + chr6_2:61277935-61277954 Msa0922590:intron 30.0%
ATTCTACTAATGCTATGACT+GGG + chr6_2:61277936-61277955 Msa0922590:intron 30.0%
!! TGACACCAAGCTATTTTATT+TGG + chr6_2:61277997-61278016 Msa0922590:CDS 30.0%
!! GACACCAAGCTATTTTATTT+GGG + chr6_2:61277998-61278017 Msa0922590:CDS 30.0%
ACTTCCCAAATAAAATAGCT+TGG - chr6_2:61278005-61278024 None:intergenic 30.0%
!! AAAGTCTTTGAGATTTCTGT+CGG + chr6_2:61278503-61278522 Msa0922590:intron 30.0%
TTCTGTCGGATTATAATGTT+TGG + chr6_2:61278517-61278536 Msa0922590:intron 30.0%
! GGAAGCAAAATTTTGTATGA+TGG + chr6_2:61278864-61278883 Msa0922590:CDS 30.0%
! AGCAAAATTTTGTATGATGG+TGG + chr6_2:61278867-61278886 Msa0922590:CDS 30.0%
AAACGCTTATGAGACTATTA+CGG - chr6_2:61279207-61279226 None:intergenic 30.0%
TTCTTAGTATCTATTTGGAC+TGG - chr6_2:61279254-61279273 None:intergenic 30.0%
AAACAAGAATTCCAAGACAA+AGG + chr6_2:61279530-61279549 Msa0922590:CDS 30.0%
! ACTTTTCTTCCATGATTACC+AGG + chr6_2:61272850-61272869 Msa0922590:intron 35.0%
! TATTTGAAGCCTGGTAATCA+TGG - chr6_2:61272862-61272881 None:intergenic 35.0%
ATTACCAGGCTTCAAATAGT+TGG + chr6_2:61272864-61272883 Msa0922590:intron 35.0%
! TGTCATCAGTTACCAGTTTT+AGG + chr6_2:61272904-61272923 Msa0922590:five_prime_UTR 35.0%
AACTCAAAACCTCCTAAAAC+TGG - chr6_2:61272919-61272938 None:intergenic 35.0%
TAAGAGAGTAAAGACCTGTT+TGG - chr6_2:61272975-61272994 None:intergenic 35.0%
GACTAACAAAAGCAAGCAAA+AGG - chr6_2:61273276-61273295 None:intergenic 35.0%
! GAATAGTGTTGTTCAATTGG+AGG + chr6_2:61273356-61273375 Msa0922590:intron 35.0%
! TCATATTTTCAGTCCTCATG+TGG + chr6_2:61273445-61273464 Msa0922590:intron 35.0%
! CATATTTTCAGTCCTCATGT+GGG + chr6_2:61273446-61273465 Msa0922590:intron 35.0%
GGAAAAGAGATAACACATAG+TGG + chr6_2:61273545-61273564 Msa0922590:intron 35.0%
! AGATAACACATAGTGGAGAA+AGG + chr6_2:61273552-61273571 Msa0922590:intron 35.0%
! GATAACACATAGTGGAGAAA+GGG + chr6_2:61273553-61273572 Msa0922590:intron 35.0%
TCCTATGGAACCATATGAAA+GGG + chr6_2:61274016-61274035 Msa0922590:CDS 35.0%
GCTTCATTTAATCCAATGAG+TGG + chr6_2:61274086-61274105 Msa0922590:CDS 35.0%
!! ACATATAATGGACCACTCAT+TGG - chr6_2:61274101-61274120 None:intergenic 35.0%
! CATACACCTGGAAATCTTTT+CGG + chr6_2:61274125-61274144 Msa0922590:CDS 35.0%
! ATACACCTGGAAATCTTTTC+GGG + chr6_2:61274126-61274145 Msa0922590:CDS 35.0%
!! AAATCTTTTCGGGCAGAATA+TGG + chr6_2:61274136-61274155 Msa0922590:CDS 35.0%
TGTTCATTCATGCCACATAA+AGG - chr6_2:61274206-61274225 None:intergenic 35.0%
TTATGTGGCATGAATGAACA+TGG + chr6_2:61274206-61274225 Msa0922590:CDS 35.0%
TACTTGTCCAACTTACTTCA+AGG + chr6_2:61274310-61274329 Msa0922590:CDS 35.0%
ATAAGCCCTAAATACATAGG+CGG - chr6_2:61274473-61274492 None:intergenic 35.0%
TATCACACCATCAATTGAGT+TGG + chr6_2:61274615-61274634 Msa0922590:intron 35.0%
TAATGTGCCAACTCAATTGA+TGG - chr6_2:61274625-61274644 None:intergenic 35.0%
! TATTCTCTATGGTGATGCAA+AGG + chr6_2:61274915-61274934 Msa0922590:CDS 35.0%
!!! TTTTGCAATTTGTTGCTTGG+TGG + chr6_2:61275029-61275048 Msa0922590:CDS 35.0%
! GGTTCTTCTAAGAGAACATT+TGG - chr6_2:61275433-61275452 None:intergenic 35.0%
TACTCTTCTGTGATGTAGTA+GGG + chr6_2:61275740-61275759 Msa0922590:intron 35.0%
TCATTCTTTGCAGTTTAGGT+TGG + chr6_2:61275783-61275802 Msa0922590:intron 35.0%
!! GAAGAGCTATTTTCTTAGGA+TGG - chr6_2:61275858-61275877 None:intergenic 35.0%
CGATACACAATAAGCAACAA+AGG - chr6_2:61275956-61275975 None:intergenic 35.0%
GTATCGTATAAGGCTCTATT+TGG + chr6_2:61275970-61275989 Msa0922590:intron 35.0%
AATTAAGCGGTTATCGTATG+AGG + chr6_2:61276004-61276023 Msa0922590:intron 35.0%
ATTAAGCGGTTATCGTATGA+GGG + chr6_2:61276005-61276024 Msa0922590:intron 35.0%
ATCACTAAGCTGACATTTCT+TGG - chr6_2:61276342-61276361 None:intergenic 35.0%
ATGAATAACGGTGACACTAA+TGG - chr6_2:61276428-61276447 None:intergenic 35.0%
GTTTGTCATTCCAAAACACT+TGG + chr6_2:61276557-61276576 Msa0922590:intron 35.0%
CCAGTTGGATAAATTAGCAT+TGG - chr6_2:61276666-61276685 None:intergenic 35.0%
CCAATGCTAATTTATCCAAC+TGG + chr6_2:61276663-61276682 Msa0922590:intron 35.0%
! CTTTTTACCTTTATGCTGTC+TGG + chr6_2:61276726-61276745 Msa0922590:intron 35.0%
!! TTTGGTTTGCAGGTAATGTT+AGG + chr6_2:61276777-61276796 Msa0922590:intron 35.0%
CATCTGTAAAATTTCGCTGT+CGG - chr6_2:61276855-61276874 None:intergenic 35.0%
! TAGACATTGATTAACCCTCT+GGG - chr6_2:61276955-61276974 None:intergenic 35.0%
! TGCTCAAAACTCATTGATTG+TGG + chr6_2:61277008-61277027 Msa0922590:CDS 35.0%
! AAACTCATTGATTGTGGTCA+TGG + chr6_2:61277014-61277033 Msa0922590:CDS 35.0%
AAGCACTCAGGAATATCAAA+AGG + chr6_2:61277037-61277056 Msa0922590:CDS 35.0%
AGCACTCAGGAATATCAAAA+GGG + chr6_2:61277038-61277057 Msa0922590:CDS 35.0%
!!! ACAGAAGATGGTTTTGAGTA+TGG + chr6_2:61277110-61277129 Msa0922590:CDS 35.0%
!! TTCATCATTTTGGGGATTTC+AGG + chr6_2:61277193-61277212 Msa0922590:CDS 35.0%
! TTGCCTCAATTTTCGTAACT+AGG - chr6_2:61277295-61277314 None:intergenic 35.0%
CAACATACTTCAGGAAACAA+AGG + chr6_2:61277406-61277425 Msa0922590:intron 35.0%
GGCGTTCCATAATTAGAAAA+TGG - chr6_2:61277527-61277546 None:intergenic 35.0%
! AGAGTGTTTGATCATGTCAT+AGG + chr6_2:61277653-61277672 Msa0922590:intron 35.0%
ATCGTATATCTCAAACAGCA+CGG + chr6_2:61277678-61277697 Msa0922590:intron 35.0%
! TGTAGGTTTGACTACTCTTT+TGG + chr6_2:61277716-61277735 Msa0922590:intron 35.0%
CAATGATTCCCATCGTAAAA+AGG - chr6_2:61278028-61278047 None:intergenic 35.0%
! CTTTTTACGATGGGAATCAT+TGG + chr6_2:61278026-61278045 Msa0922590:CDS 35.0%
CAAAACTTTCTTCAAGCTCT+TGG + chr6_2:61278089-61278108 Msa0922590:CDS 35.0%
TTCTTCAAGCTCTTGGAAAA+AGG + chr6_2:61278096-61278115 Msa0922590:CDS 35.0%
!! TAATGTTTGGTTTGTGATGC+AGG + chr6_2:61278530-61278549 Msa0922590:intron 35.0%
AGTGAATGAAGAACTACTCA+TGG + chr6_2:61278597-61278616 Msa0922590:CDS 35.0%
TATTAGTATTTCCGACGATG+AGG + chr6_2:61278689-61278708 Msa0922590:intron 35.0%
! GGTTCGAATATTTTCCTTGA+TGG + chr6_2:61278785-61278804 Msa0922590:intron 35.0%
TTGTCTTAGTCTCTCACAAA+TGG - chr6_2:61278829-61278848 None:intergenic 35.0%
! AATCTAACCTTTGTTTCCTG+AGG - chr6_2:61277416-61277435 None:intergenic 35.0%
! GTTTAGCTCATATGTCAAAC+AGG - chr6_2:61279115-61279134 None:intergenic 35.0%
TAAGCTCTCCTGACATATTA+TGG + chr6_2:61279151-61279170 Msa0922590:intron 35.0%
GGTTATTTGAGCTTATCTAC+TGG - chr6_2:61279233-61279252 None:intergenic 35.0%
!!! TGTTTTAGCACAAACTGCAA+GGG - chr6_2:61279515-61279534 None:intergenic 35.0%
!!! TTGTTTTAGCACAAACTGCA+AGG - chr6_2:61279516-61279535 None:intergenic 35.0%
AGTATTGTGCCTAACAAATG+TGG + chr6_2:61279570-61279589 Msa0922590:CDS 35.0%
AAAGGCTTGTAACTTCTTCA+AGG - chr6_2:61279621-61279640 None:intergenic 35.0%
TCCTCAAGAATCTTGCAAAA+AGG - chr6_2:61279639-61279658 None:intergenic 35.0%
AGGACAAAGAGAATACCTAA+TGG - chr6_2:61279680-61279699 None:intergenic 35.0%
!!! CATCAGTTACCAGTTTTAGG+AGG + chr6_2:61272907-61272926 Msa0922590:five_prime_UTR 40.0%
! GTGTTGTTCAATTGGAGGAA+AGG + chr6_2:61273361-61273380 Msa0922590:intron 40.0%
TACTTTCCAAATCCCACATG+AGG - chr6_2:61273461-61273480 None:intergenic 40.0%
TGGAACTTTGTGTAGAGTTC+AGG + chr6_2:61273524-61273543 Msa0922590:intron 40.0%
GCAGATTTGTGAACACAACA+TGG + chr6_2:61273863-61273882 Msa0922590:intron 40.0%
! GGATTAGCATCTGACAGAAT+CGG - chr6_2:61273912-61273931 None:intergenic 40.0%
! TCAGGGTCATTTGACTGTTT+TGG - chr6_2:61273933-61273952 None:intergenic 40.0%
AAACAGTCAAATGACCCTGA+CGG + chr6_2:61273933-61273952 Msa0922590:CDS 40.0%
GATTCCAGAATCTTGTACCT+AGG + chr6_2:61273961-61273980 Msa0922590:CDS 40.0%
TTCTATTCCCATGACTCCTA+TGG + chr6_2:61274001-61274020 Msa0922590:CDS 40.0%
TATGGTTCCATAGGAGTCAT+GGG - chr6_2:61274011-61274030 None:intergenic 40.0%
ATATGGTTCCATAGGAGTCA+TGG - chr6_2:61274012-61274031 None:intergenic 40.0%
CTCCTATGGAACCATATGAA+AGG + chr6_2:61274015-61274034 Msa0922590:CDS 40.0%
TCCCTTTCATATGGTTCCAT+AGG - chr6_2:61274020-61274039 None:intergenic 40.0%
ACTAATTTCAAGGGACACAC+AGG + chr6_2:61274041-61274060 Msa0922590:CDS 40.0%
! GCTTTTCTTTGACTCCTTAG+AGG - chr6_2:61274068-61274087 None:intergenic 40.0%
!!! CTTTTCACTGGTTTGCTCAT+TGG - chr6_2:61274167-61274186 None:intergenic 40.0%
GGTTTGCAGAATAACAATGC+TGG + chr6_2:61274227-61274246 Msa0922590:CDS 40.0%
GTTGGACAAGTAGTACAGTA+AGG - chr6_2:61274302-61274321 None:intergenic 40.0%
! TGAGTAGCCTTGAAGTAAGT+TGG - chr6_2:61274320-61274339 None:intergenic 40.0%
TTCGAGTCTGTTCAATCCTA+AGG + chr6_2:61274358-61274377 Msa0922590:CDS 40.0%
CAGGCATGAAGCAAGATATA+AGG - chr6_2:61274441-61274460 None:intergenic 40.0%
TTTCCCCGCCTATGTATTTA+GGG + chr6_2:61274465-61274484 Msa0922590:intron 40.0%
TAAGCCCTAAATACATAGGC+GGG - chr6_2:61274472-61274491 None:intergenic 40.0%
TGATGCTAGACACTATCTTG+CGG - chr6_2:61274510-61274529 None:intergenic 40.0%
GATGGTGTGATACTTTGTCT+AGG - chr6_2:61274607-61274626 None:intergenic 40.0%
! TCTATGGTGATGCAAAGGAT+TGG + chr6_2:61274920-61274939 Msa0922590:CDS 40.0%
! CTATGGTGATGCAAAGGATT+GGG + chr6_2:61274921-61274940 Msa0922590:CDS 40.0%
!! TTGCTTGGTGGCAATTTTTG+TGG + chr6_2:61275041-61275060 Msa0922590:CDS 40.0%
! CTTCTTGCTATCTGTGGATA+AGG + chr6_2:61275077-61275096 Msa0922590:CDS 40.0%
TGCTATCTGTGGATAAGGTA+TGG + chr6_2:61275082-61275101 Msa0922590:intron 40.0%
TGCAGCAGTGTTAACATTAG+CGG - chr6_2:61275633-61275652 None:intergenic 40.0%
GTACTCTTCTGTGATGTAGT+AGG + chr6_2:61275739-61275758 Msa0922590:intron 40.0%
TCACAAGTACTTATGTCCGT+AGG + chr6_2:61276177-61276196 Msa0922590:intron 40.0%
AGCTCATTTGAGCTTACCTA+CGG - chr6_2:61276196-61276215 None:intergenic 40.0%
CTTTGTAACTTCAAGGGACA+TGG + chr6_2:61276372-61276391 Msa0922590:intron 40.0%
ATCTTGGAATGTACTGAGCA+AGG - chr6_2:61276629-61276648 None:intergenic 40.0%
GGGAGAAATCTACACAATCT+TGG - chr6_2:61276645-61276664 None:intergenic 40.0%
AACTGGATTCATCTTCGAGT+CGG + chr6_2:61276680-61276699 Msa0922590:intron 40.0%
ACATTACCTGCAAACCAAAG+AGG - chr6_2:61276776-61276795 None:intergenic 40.0%
ATTCTTCTTTCTTGTCCCAG+AGG + chr6_2:61276937-61276956 Msa0922590:intron 40.0%
TTCTTCTTTCTTGTCCCAGA+GGG + chr6_2:61276938-61276957 Msa0922590:intron 40.0%
! GTAGACATTGATTAACCCTC+TGG - chr6_2:61276956-61276975 None:intergenic 40.0%
AGTGCTTGTTTCACAGAAGA+TGG + chr6_2:61277098-61277117 Msa0922590:CDS 40.0%
TCCTTACTAGTGCTTTGTCA+AGG - chr6_2:61277501-61277520 None:intergenic 40.0%
! GTCTGGTCAGAAGTATAACA+TGG + chr6_2:61277578-61277597 Msa0922590:intron 40.0%
! GGTCAGAAGTATAACATGGA+CGG + chr6_2:61277582-61277601 Msa0922590:intron 40.0%
TATAACATGGACGGCTATGA+CGG + chr6_2:61277591-61277610 Msa0922590:intron 40.0%
! AGTCACTCCTTTTTACTCGA+AGG - chr6_2:61277617-61277636 None:intergenic 40.0%
ATCAAACACTCTCGAACCAT+AGG - chr6_2:61277645-61277664 None:intergenic 40.0%
AACCTACATCAAACTCGAGT+GGG - chr6_2:61277704-61277723 None:intergenic 40.0%
AAACCTACATCAAACTCGAG+TGG - chr6_2:61277705-61277724 None:intergenic 40.0%
TGTGCAGCAAATTAGTACTC+TGG + chr6_2:61277965-61277984 Msa0922590:intron 40.0%
! TTGGGAAGTCCTTTTTACGA+TGG + chr6_2:61278016-61278035 Msa0922590:CDS 40.0%
! TGGGAAGTCCTTTTTACGAT+GGG + chr6_2:61278017-61278036 Msa0922590:CDS 40.0%
ACGATGGGAATCATTGGATT+AGG + chr6_2:61278032-61278051 Msa0922590:CDS 40.0%
!! TTGCTTTTCGCTCTTCTCAT+TGG + chr6_2:61278059-61278078 Msa0922590:CDS 40.0%
ACAAGCTGAACGTTACAACT+GGG + chr6_2:61278561-61278580 Msa0922590:CDS 40.0%
ATTTGCCAGAAGATCTTCAG+AGG + chr6_2:61278623-61278642 Msa0922590:CDS 40.0%
TTTGCCAGAAGATCTTCAGA+GGG + chr6_2:61278624-61278643 Msa0922590:CDS 40.0%
! ATATCCCTCTGAAGATCTTC+TGG - chr6_2:61278631-61278650 None:intergenic 40.0%
CTAAACAAACACCTCATCGT+CGG - chr6_2:61278703-61278722 None:intergenic 40.0%
CAGAATAGGATCATCCATCA+AGG - chr6_2:61278802-61278821 None:intergenic 40.0%
! CTTGATGGATGATCCTATTC+TGG + chr6_2:61278800-61278819 Msa0922590:CDS 40.0%
! TTTTGTCGTGCGTGGAAAAT+TGG + chr6_2:61278908-61278927 Msa0922590:CDS 40.0%
! CGTGGAAAATTGGAGAGTAT+TGG + chr6_2:61278918-61278937 Msa0922590:CDS 40.0%
!! TTGGAGAGTATTGGTGAAGA+TGG + chr6_2:61278927-61278946 Msa0922590:CDS 40.0%
! ATTCGAGTTCCTCTATCTGA+AGG + chr6_2:61278951-61278970 Msa0922590:CDS 40.0%
CAAACATTGCCTTCAGATAG+AGG - chr6_2:61278963-61278982 None:intergenic 40.0%
CTATCTGAAGGCAATGTTTG+TGG + chr6_2:61278963-61278982 Msa0922590:CDS 40.0%
GGAGAGATATCATGAGACTA+AGG - chr6_2:61279094-61279113 None:intergenic 40.0%
TTGCTAACAAGCCTTTGTCT+TGG - chr6_2:61279544-61279563 None:intergenic 40.0%
!! GACAAAGGCTTGTTAGCAAT+AGG + chr6_2:61279545-61279564 Msa0922590:CDS 40.0%
ATTGTGCCTAACAAATGTGG+AGG + chr6_2:61279573-61279592 Msa0922590:CDS 40.0%
AGAATGCCTCCACATTTGTT+AGG - chr6_2:61279582-61279601 None:intergenic 40.0%
! GCCTTTTTGCAAGATTCTTG+AGG + chr6_2:61279635-61279654 Msa0922590:CDS 40.0%
AAGGATTCATAGGGTGAGTG+GGG - chr6_2:61272797-61272816 None:intergenic 45.0%
GAAGGATTCATAGGGTGAGT+GGG - chr6_2:61272798-61272817 None:intergenic 45.0%
TGAAGGATTCATAGGGTGAG+TGG - chr6_2:61272799-61272818 None:intergenic 45.0%
! CCATCCAACTATTTGAAGCC+TGG - chr6_2:61272871-61272890 None:intergenic 45.0%
CCAGGCTTCAAATAGTTGGA+TGG + chr6_2:61272868-61272887 Msa0922590:intron 45.0%
TAAGCTATCCTGAGCTAGCT+AGG + chr6_2:61273127-61273146 Msa0922590:intron 45.0%
TAAGCTATCCTAGCTAGCTC+AGG - chr6_2:61273138-61273157 None:intergenic 45.0%
TGGAGGAAAGGATAAGCTTG+TGG + chr6_2:61273373-61273392 Msa0922590:intron 45.0%
AGGAAAGGATAAGCTTGTGG+TGG + chr6_2:61273376-61273395 Msa0922590:intron 45.0%
TTCAGTCCTCATGTGGGATT+TGG + chr6_2:61273452-61273471 Msa0922590:intron 45.0%
GGCTCAAACAACTCAAACAG+TGG - chr6_2:61273720-61273739 None:intergenic 45.0%
! TCTGGAATCTAGAACCGTCA+GGG - chr6_2:61273950-61273969 None:intergenic 45.0%
!! TTCTGGAATCTAGAACCGTC+AGG - chr6_2:61273951-61273970 None:intergenic 45.0%
GTGTCCTAGGTACAAGATTC+TGG - chr6_2:61273968-61273987 None:intergenic 45.0%
ATCGATACACTTCGTGTCCT+AGG - chr6_2:61273981-61274000 None:intergenic 45.0%
TTCTGCCCGAAAAGATTTCC+AGG - chr6_2:61274134-61274153 None:intergenic 45.0%
GTTTCCCCGCCTATGTATTT+AGG + chr6_2:61274464-61274483 Msa0922590:intron 45.0%
AAGCCCTAAATACATAGGCG+GGG - chr6_2:61274471-61274490 None:intergenic 45.0%
GATGCTAGACACTATCTTGC+GGG - chr6_2:61274509-61274528 None:intergenic 45.0%
GGTGTGATACTTTGTCTAGG+TGG - chr6_2:61274604-61274623 None:intergenic 45.0%
!! GCAGTTTAGGTTGGCTTATG+TGG + chr6_2:61275792-61275811 Msa0922590:intron 45.0%
TGTTGTACTTCCACTTCCTC+AGG + chr6_2:61275912-61275931 Msa0922590:intron 45.0%
GATTGAGAGAGAGTTACCTG+AGG - chr6_2:61275931-61275950 None:intergenic 45.0%
GGGACATGGTTCAAATCTCT+CGG + chr6_2:61276386-61276405 Msa0922590:intron 45.0%
GGACATGGTTCAAATCTCTC+GGG + chr6_2:61276387-61276406 Msa0922590:intron 45.0%
! CCTGATGTTCCCAAGTGTTT+TGG - chr6_2:61276570-61276589 None:intergenic 45.0%
CCAAAACACTTGGGAACATC+AGG + chr6_2:61276567-61276586 Msa0922590:intron 45.0%
AATGTACTGAGCAAGGACGA+CGG - chr6_2:61276622-61276641 None:intergenic 45.0%
GACTCGAAGATGAATCCAGT+TGG - chr6_2:61276681-61276700 None:intergenic 45.0%
ATTCATCTTCGAGTCGGCAT+GGG + chr6_2:61276686-61276705 Msa0922590:intron 45.0%
AACATGGCCAGACAGCATAA+AGG - chr6_2:61276736-61276755 None:intergenic 45.0%
CTTTGTCAAGGCCAACACTT+GGG - chr6_2:61277489-61277508 None:intergenic 45.0%
! GCCTTGACAAAGCACTAGTA+AGG + chr6_2:61277497-61277516 Msa0922590:intron 45.0%
ATGACGGCCTTCGAGTAAAA+AGG + chr6_2:61277607-61277626 Msa0922590:intron 45.0%
! AAGGAGTGACTTGTGTCCTA+TGG + chr6_2:61277626-61277645 Msa0922590:intron 45.0%
GCAGCAAATTAGTACTCTGG+CGG + chr6_2:61277968-61277987 Msa0922590:intron 45.0%
CAGCAAATTAGTACTCTGGC+GGG + chr6_2:61277969-61277988 Msa0922590:intron 45.0%
TTGAGCAATGGATGAGCCAT+AGG + chr6_2:61278347-61278366 Msa0922590:CDS 45.0%
GCTTAGCAGATGATCTGAGA+AGG + chr6_2:61278371-61278390 Msa0922590:CDS 45.0%
GACAAGCTGAACGTTACAAC+TGG + chr6_2:61278560-61278579 Msa0922590:CDS 45.0%
TCACAAATGGCGTCCAGAAT+AGG - chr6_2:61278816-61278835 None:intergenic 45.0%
!! TGATGGTGGCTTAGTAGAGA+AGG + chr6_2:61278881-61278900 Msa0922590:CDS 45.0%
TGAAGGCAATGTTTGTGGTG+AGG + chr6_2:61278968-61278987 Msa0922590:CDS 45.0%
GTGGTGAGGAACTTCTTACA+TGG + chr6_2:61278982-61279001 Msa0922590:CDS 45.0%
GAGCATACCTCAGGAAACAA+AGG + chr6_2:61279011-61279030 Msa0922590:CDS 45.0%
TTCAAGGTCAGCTGCTCTTA+GGG - chr6_2:61279605-61279624 None:intergenic 45.0%
!! TAAAAAATTATGTATAATTA+TGG - chr6_2:61274814-61274833 None:intergenic 5.0%
TGTCAGTTGCAGCTCCAAAC+AGG + chr6_2:61272958-61272977 Msa0922590:five_prime_UTR 50.0%
!! GGCTGAGTTTGATAGTGACG+AGG + chr6_2:61273884-61273903 Msa0922590:CDS 50.0%
!! CACTGGTTTGCTCATTGGCA+CGG - chr6_2:61274162-61274181 None:intergenic 50.0%
ACCAACCACTCTAGACTCAG+GGG - chr6_2:61275818-61275837 None:intergenic 50.0%
CACCAACCACTCTAGACTCA+GGG - chr6_2:61275819-61275838 None:intergenic 50.0%
GAGAGAGTTACCTGAGGAAG+TGG - chr6_2:61275925-61275944 None:intergenic 50.0%
GATTCATCTTCGAGTCGGCA+TGG + chr6_2:61276685-61276704 Msa0922590:intron 50.0%
!! GTGGTACCTCTTTGGTTTGC+AGG + chr6_2:61276767-61276786 Msa0922590:intron 50.0%
!! TTGTGGTCATGGAAGCACTC+AGG + chr6_2:61277025-61277044 Msa0922590:CDS 50.0%
AGGGATCAGATTGGGCTCAT+TGG + chr6_2:61277057-61277076 Msa0922590:CDS 50.0%
GCTTTGTCAAGGCCAACACT+TGG - chr6_2:61277490-61277509 None:intergenic 50.0%
CAACGCTCCATTGTGTCTCA+CGG - chr6_2:61277555-61277574 None:intergenic 50.0%
!! ACAATGGAGCGTTGGATGTC+TGG + chr6_2:61277561-61277580 Msa0922590:intron 50.0%
GACAACGCGATGTTGAGCAA+TGG + chr6_2:61278335-61278354 Msa0922590:CDS 50.0%
GATCATCTGCTAAGCGCCTA+TGG - chr6_2:61278366-61278385 None:intergenic 50.0%
TGGTGGCTTAGTAGAGAAGG+TGG + chr6_2:61278884-61278903 Msa0922590:CDS 50.0%
! AAGGTGGTTTTTGTCGTGCG+TGG + chr6_2:61278900-61278919 Msa0922590:CDS 50.0%
TGGTGTCTTGAGCATACCTC+AGG + chr6_2:61279002-61279021 Msa0922590:CDS 50.0%
CTTCAAGGTCAGCTGCTCTT+AGG - chr6_2:61279606-61279625 None:intergenic 50.0%
GCAAGATTCTTGAGGAGTCC+TGG + chr6_2:61279643-61279662 Msa0922590:CDS 50.0%
TTGAGGAGTCCTGGTGTTCA+AGG + chr6_2:61279652-61279671 Msa0922590:CDS 50.0%
CTAATGGCTCCTTGAACACC+AGG - chr6_2:61279664-61279683 None:intergenic 50.0%
CTGGTGTTCAAGGAGCCATT+AGG + chr6_2:61279662-61279681 Msa0922590:CDS 50.0%
AGGGACACACAGGTCCTCTA+AGG + chr6_2:61274051-61274070 Msa0922590:CDS 55.0%
ACATAGGCGGGGAAACTGTC+AGG - chr6_2:61274460-61274479 None:intergenic 55.0%
GCACCAACCACTCTAGACTC+AGG - chr6_2:61275820-61275839 None:intergenic 55.0%
! GAGTCTAGAGTGGTTGGTGC+TGG + chr6_2:61275820-61275839 Msa0922590:intron 55.0%
GGCTCATGGTGGTACCTCTT+TGG + chr6_2:61276759-61276778 Msa0922590:intron 55.0%
CAAGGCCAACACTTGGGCAT+CGG - chr6_2:61277483-61277502 None:intergenic 55.0%
CCATTGTGTCTCACGGATGG+AGG - chr6_2:61277548-61277567 None:intergenic 55.0%
CCTCCATCCGTGAGACACAA+TGG + chr6_2:61277545-61277564 Msa0922590:intron 55.0%
GCTCCATTGTGTCTCACGGA+TGG - chr6_2:61277551-61277570 None:intergenic 55.0%
CGTGAGACACAATGGAGCGT+TGG + chr6_2:61277553-61277572 Msa0922590:intron 55.0%
GGCCCACTCGAGTTTGATGT+AGG + chr6_2:61277699-61277718 Msa0922590:intron 55.0%
TACAACTGGGCTGCAACGAG+AGG + chr6_2:61278574-61278593 Msa0922590:CDS 55.0%
TGTGGCCCCTGAGTCTAGAG+TGG + chr6_2:61275810-61275829 Msa0922590:intron 60.0%
! GCCCCTGAGTCTAGAGTGGT+TGG + chr6_2:61275814-61275833 Msa0922590:intron 60.0%
TACCGCCGATGCCCAAGTGT+TGG + chr6_2:61277475-61277494 Msa0922590:intron 60.0%
!! GGCATCGGCGGTACACTCAC+AGG - chr6_2:61277468-61277487 None:intergenic 65.0%
!! GGCCAACACTTGGGCATCGG+CGG - chr6_2:61277480-61277499 None:intergenic 65.0%
Chromosome Type Strat End Strand Name
chr6_2 gene 61272757 61279717 61272757 ID=Msa0922590;Name=Msa0922590
chr6_2 mRNA 61272757 61279717 61272757 ID=Msa0922590-mRNA-1;Parent=Msa0922590;Name=Msa0922590-mRNA-1;_AED=0.23;_eAED=0.24;_QI=218|0.9|0.90|1|0.7|0.72|11|0|614
chr6_2 exon 61272757 61272851 61272757 ID=Msa0922590-mRNA-1:exon:9457;Parent=Msa0922590-mRNA-1
chr6_2 exon 61272872 61272979 61272872 ID=Msa0922590-mRNA-1:exon:9458;Parent=Msa0922590-mRNA-1
chr6_2 exon 61273867 61274379 61273867 ID=Msa0922590-mRNA-1:exon:9459;Parent=Msa0922590-mRNA-1
chr6_2 exon 61274907 61275098 61274907 ID=Msa0922590-mRNA-1:exon:9460;Parent=Msa0922590-mRNA-1
chr6_2 exon 61275185 61275283 61275185 ID=Msa0922590-mRNA-1:exon:9461;Parent=Msa0922590-mRNA-1
chr6_2 exon 61276957 61277214 61276957 ID=Msa0922590-mRNA-1:exon:9462;Parent=Msa0922590-mRNA-1
chr6_2 exon 61277972 61278117 61277972 ID=Msa0922590-mRNA-1:exon:9463;Parent=Msa0922590-mRNA-1
chr6_2 exon 61278315 61278392 61278315 ID=Msa0922590-mRNA-1:exon:9464;Parent=Msa0922590-mRNA-1
chr6_2 exon 61278552 61278681 61278552 ID=Msa0922590-mRNA-1:exon:9465;Parent=Msa0922590-mRNA-1
chr6_2 exon 61278786 61279032 61278786 ID=Msa0922590-mRNA-1:exon:9466;Parent=Msa0922590-mRNA-1
chr6_2 exon 61279521 61279717 61279521 ID=Msa0922590-mRNA-1:exon:9467;Parent=Msa0922590-mRNA-1
chr6_2 five_prime_UTR 61272757 61272851 61272757 ID=Msa0922590-mRNA-1:five_prime_utr;Parent=Msa0922590-mRNA-1
chr6_2 five_prime_UTR 61272872 61272979 61272872 ID=Msa0922590-mRNA-1:five_prime_utr;Parent=Msa0922590-mRNA-1
chr6_2 five_prime_UTR 61273867 61273881 61273867 ID=Msa0922590-mRNA-1:five_prime_utr;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61273882 61274379 61273882 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61274907 61275098 61274907 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61275185 61275283 61275185 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61276957 61277214 61276957 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61277972 61278117 61277972 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61278315 61278392 61278315 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61278552 61278681 61278552 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61278786 61279032 61278786 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
chr6_2 CDS 61279521 61279717 61279521 ID=Msa0922590-mRNA-1:cds;Parent=Msa0922590-mRNA-1
Gene Sequence

>Msa0922590

ATGGCTGAGTTTGATAGTGACGAGGTGCCGATTCTGTCAGATGCTAATCCAAAACAGTCAAATGACCCTGACGGTTCTAGATTCCAGAATCTTGTACCTAGGACACGAAGTGTATCGATTTCTATTCCCATGACTCCTATGGAACCATATGAAAGGGATACTAATTTCAAGGGACACACAGGTCCTCTAAGGAGTCAAAGAAAAGCTTCATTTAATCCAATGAGTGGTCCATTATATGTTACTCATACACCTGGAAATCTTTTCGGGCAGAATATGGCCGTGCCAATGAGCAAACCAGTGAAAAGTAAGACTGAAAAATTTCCTTTATGTGGCATGAATGAACATGGTTTGCAGAATAACAATGCTGGTAAAAATGAACATTTATTAAGATCTGGTCAATTGGGAATGTGTAATGATCCTTACTGTACTACTTGTCCAACTTACTTCAAGGCTACTCAACAAAGCGATTTGAAAAGTTCGAGTCTGTTCAATCCTAAGTTTCAGAATATTCTCTATGGTGATGCAAAGGATTGGGCAAGAAGAATGTTTGCTTTCTTGATTCCACATGTACCTAGAGTTATAAATCCACATAATAAACTTGTACATCAATGGAATAAATTTTTTGCAATTTGTTGCTTGGTGGCAATTTTTGTGGATCCATTATTTTTCTTCTTGCTATCTGTGGATAAGGACCATAAATGTATTGTTCTTAACTCAACAATGACAACAGTGCTTGTTTTTCTTAGAAGTGTGAATGATTTCATACATTTCCTGAATATTATTCTTCAGAGGGTTAATCAATGTCTACGAAATGCGTGCAAGCATATATATTTTGATGAATGCTCAAAACTCATTGATTGTGGTCATGGAAGCACTCAGGAATATCAAAAGGGATCAGATTGGGCTCATTGGATGAAAAATGACAATGCAAGTGCTTGTTTCACAGAAGATGGTTTTGAGTATGGAATCTATCTTAAAGCAGTCAACCTTACTACAAAATCTAATGTTCTTACAAGATATGTATATTCATCATTTTGGGGATTTCAGCAAATTAGTACTCTGGCGGGAAATTTGACACCAAGCTATTTTATTTGGGAAGTCCTTTTTACGATGGGAATCATTGGATTAGGACTCTTGCTTTTCGCTCTTCTCATTGGAAACATACAAAACTTTCTTCAAGCTCTTGGAAAAAGGAGGCTAGAAATGTCACTTAGACAACGCGATGTTGAGCAATGGATGAGCCATAGGCGCTTAGCAGATGATCTGAGAAGGAGAGTGCGACAAGCTGAACGTTACAACTGGGCTGCAACGAGAGGAGTGAATGAAGAACTACTCATGGAGAATTTGCCAGAAGATCTTCAGAGGGATATAAGACGACATCTCTTTAGATTTGTTAAGAAGGTTCGAATATTTTCCTTGATGGATGATCCTATTCTGGACGCCATTTGTGAGAGACTAAGACAAAAAATTTACATCAAAGGAAGCAAAATTTTGTATGATGGTGGCTTAGTAGAGAAGGTGGTTTTTGTCGTGCGTGGAAAATTGGAGAGTATTGGTGAAGATGGAATTCGAGTTCCTCTATCTGAAGGCAATGTTTGTGGTGAGGAACTTCTTACATGGTGTCTTGAGCATACCTCAGGAAACAAAGTTTGTGCTAAAACAAGAATTCCAAGACAAAGGCTTGTTAGCAATAGGACAGTATTGTGCCTAACAAATGTGGAGGCATTCTCCCTAAGAGCAGCTGACCTTGAAGAAGTTACAAGCCTTTTTGCAAGATTCTTGAGGAGTCCTGGTGTTCAAGGAGCCATTAGGTATTCTCTTTGTCCTATGTTTATGAAATTGTGA
Protein sequence

>Msa0922590

MAEFDSDEVPILSDANPKQSNDPDGSRFQNLVPRTRSVSISIPMTPMEPYERDTNFKGHTGPLRSQRKASFNPMSGPLYVTHTPGNLFGQNMAVPMSKPVKSKTEKFPLCGMNEHGLQNNNAGKNEHLLRSGQLGMCNDPYCTTCPTYFKATQQSDLKSSSLFNPKFQNILYGDAKDWARRMFAFLIPHVPRVINPHNKLVHQWNKFFAICCLVAIFVDPLFFFLLSVDKDHKCIVLNSTMTTVLVFLRSVNDFIHFLNIILQRVNQCLRNACKHIYFDECSKLIDCGHGSTQEYQKGSDWAHWMKNDNASACFTEDGFEYGIYLKAVNLTTKSNVLTRYVYSSFWGFQQISTLAGNLTPSYFIWEVLFTMGIIGLGLLLFALLIGNIQNFLQALGKRRLEMSLRQRDVEQWMSHRRLADDLRRRVRQAERYNWAATRGVNEELLMENLPEDLQRDIRRHLFRFVKKVRIFSLMDDPILDAICERLRQKIYIKGSKILYDGGLVEKVVFVVRGKLESIGEDGIRVPLSEGNVCGEELLTWCLEHTSGNKVCAKTRIPRQRLVSNRTVLCLTNVEAFSLRAADLEEVTSLFARFLRSPGVQGAIRYSLCPMFMKL*