AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0722930

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722930 MtrunA17_Chr5g0413961 95.614 228 10 0 3 230 125 352 5.53e-149 419
Msa0722930 MtrunA17_Chr3g0126101 44.298 228 122 2 3 229 117 340 9.94e-64 201
Msa0722930 MtrunA17_Chr4g0059311 40.870 230 131 3 3 228 124 352 4.89e-55 179
Msa0722930 MtrunA17_Chr7g0227921 41.921 229 129 4 3 228 123 350 1.27e-52 173
Msa0722930 MtrunA17_Chr5g0413921 38.261 230 132 2 4 230 120 342 4.39e-50 166
Msa0722930 MtrunA17_Chr5g0413941 40.385 208 121 1 4 208 120 327 6.20e-47 158
Msa0722930 MtrunA17_Chr5g0413951 41.148 209 116 2 4 207 120 326 9.40e-47 158
Msa0722930 MtrunA17_Chr1g0150151 38.559 236 126 3 3 229 124 349 5.49e-46 156
Msa0722930 MtrunA17_Chr5g0413931 36.681 229 140 2 4 229 119 345 6.47e-46 155
Msa0722930 MtrunA17_Chr6g0451211 38.793 232 133 5 3 229 126 353 1.70e-43 150
Msa0722930 MtrunA17_Chr6g0451191 37.445 227 136 4 5 228 1 224 5.60e-43 145
Msa0722930 MtrunA17_Chr6g0483401 36.111 216 131 2 3 211 122 337 3.07e-40 141
Msa0722930 MtrunA17_Chr3g0142131 34.583 240 138 3 3 223 132 371 1.23e-39 140
Msa0722930 MtrunA17_Chr6g0451251 40.086 232 130 4 3 229 125 352 2.66e-39 139
Msa0722930 MtrunA17_Chr6g0451201 38.767 227 137 2 3 228 122 347 5.43e-39 138
Msa0722930 MtrunA17_Chr1g0155761 34.498 229 129 2 4 211 134 362 3.92e-38 136
Msa0722930 MtrunA17_Chr6g0451171 37.991 229 136 4 3 228 124 349 2.03e-37 134
Msa0722930 MtrunA17_Chr1g0186611 32.301 226 139 3 4 221 129 348 7.89e-37 132
Msa0722930 MtrunA17_Chr3g0114731 36.404 228 139 3 3 225 130 356 8.08e-37 133
Msa0722930 MtrunA17_Chr3g0114691 34.685 222 135 3 1 212 130 351 3.27e-36 131
Msa0722930 MtrunA17_Chr4g0073241 31.624 234 149 4 6 229 126 358 1.42e-34 126
Msa0722930 MtrunA17_Chr2g0310441 32.353 204 136 1 5 206 126 329 2.56e-34 125
Msa0722930 MtrunA17_Chr2g0290611 33.333 213 137 2 3 210 124 336 7.01e-34 124
Msa0722930 MtrunA17_Chr8g0383731 32.301 226 143 2 4 220 118 342 1.01e-33 124
Msa0722930 MtrunA17_Chr1g0164831 30.769 221 149 2 5 221 115 335 1.38e-33 123
Msa0722930 MtrunA17_Chr4g0051021 33.491 212 136 2 2 208 125 336 1.49e-33 124
Msa0722930 MtrunA17_Chr5g0404811 31.628 215 138 2 4 211 6 218 2.86e-33 120
Msa0722930 MtrunA17_Chr2g0278541 32.870 216 130 4 6 208 127 340 3.90e-33 123
Msa0722930 MtrunA17_Chr6g0451261 34.759 187 119 1 4 187 124 310 7.03e-33 125
Msa0722930 MtrunA17_Chr1g0184221 32.683 205 137 1 3 207 142 345 9.19e-33 122
Msa0722930 MtrunA17_Chr3g0129601 33.778 225 140 4 4 221 142 364 1.21e-32 121
Msa0722930 MtrunA17_Chr1g0186561 35.407 209 132 2 4 209 129 337 2.34e-32 120
Msa0722930 MtrunA17_Chr1g0186641 32.727 220 145 3 4 221 126 344 5.94e-32 119
Msa0722930 MtrunA17_Chr4g0050931 32.569 218 133 4 3 208 85 300 7.32e-32 118
Msa0722930 MtrunA17_Chr1g0160171 34.615 208 133 2 3 207 128 335 1.32e-31 119
Msa0722930 MtrunA17_Chr7g0255561 30.047 213 142 1 3 208 126 338 2.31e-31 118
Msa0722930 MtrunA17_Chr7g0255581 30.047 213 142 1 3 208 126 338 2.31e-31 118
Msa0722930 MtrunA17_Chr8g0334761 30.000 230 156 2 4 230 124 351 3.46e-31 117
Msa0722930 MtrunA17_Chr1g0186571 31.100 209 142 2 3 209 125 333 4.05e-31 117
Msa0722930 MtrunA17_Chr6g0463971 33.333 219 139 3 5 217 129 346 4.69e-31 117
Msa0722930 MtrunA17_Chr4g0050881 31.132 212 140 1 1 206 118 329 4.71e-31 117
Msa0722930 MtrunA17_Chr4g0050891 33.493 209 131 2 1 201 123 331 5.92e-31 117
Msa0722930 MtrunA17_Chr2g0278551 32.075 212 139 2 2 208 123 334 6.19e-31 117
Msa0722930 MtrunA17_Chr1g0186601 30.594 219 150 2 4 220 129 347 1.34e-30 115
Msa0722930 MtrunA17_Chr3g0126091 32.328 232 151 3 4 230 127 357 1.67e-30 115
Msa0722930 MtrunA17_Chr2g0284261 31.579 209 142 1 1 208 118 326 4.11e-30 114
Msa0722930 MtrunA17_Chr1g0171301 31.308 214 135 3 4 209 129 338 6.55e-30 114
Msa0722930 MtrunA17_Chr8g0334751 31.390 223 142 2 5 224 126 340 1.55e-29 113
Msa0722930 MtrunA17_Chr8g0334771 31.220 205 138 1 5 206 125 329 2.17e-29 112
Msa0722930 MtrunA17_Chr2g0332001 32.301 226 148 3 3 225 150 373 2.52e-29 113
Msa0722930 MtrunA17_Chr1g0160181 33.641 217 128 5 3 208 130 341 2.59e-29 113
Msa0722930 MtrunA17_Chr3g0114711 34.959 246 115 5 3 206 126 368 2.96e-29 112
Msa0722930 MtrunA17_Chr1g0182291 32.456 228 147 4 4 228 128 351 4.94e-29 111
Msa0722930 MtrunA17_Chr3g0081421 32.547 212 133 3 4 206 130 340 8.62e-29 111
Msa0722930 MtrunA17_Chr7g0263101 33.488 215 125 6 3 206 125 332 1.82e-28 110
Msa0722930 MtrunA17_Chr4g0050941 32.719 217 132 3 4 208 126 340 3.60e-28 109
Msa0722930 MtrunA17_Chr3g0129571 29.870 231 144 6 3 225 121 341 3.71e-28 109
Msa0722930 MtrunA17_Chr2g0278561 31.455 213 134 5 5 208 129 338 1.05e-27 108
Msa0722930 MtrunA17_Chr7g0271561 30.909 220 140 3 3 211 119 337 2.50e-27 107
Msa0722930 MtrunA17_Chr8g0354121 30.213 235 138 6 4 225 126 347 4.77e-27 107
Msa0722930 MtrunA17_Chr3g0081511 31.280 211 136 3 4 207 130 338 7.83e-27 106
Msa0722930 MtrunA17_Chr1g0160111 29.817 218 144 3 3 211 119 336 1.98e-26 105
Msa0722930 MtrunA17_Chr3g0129591 27.897 233 151 3 3 228 119 341 2.06e-26 104
Msa0722930 MtrunA17_Chr5g0441761 28.230 209 138 2 3 206 126 327 1.05e-25 102
Msa0722930 MtrunA17_Chr2g0278021 29.825 228 144 3 5 220 1 224 1.37e-25 101
Msa0722930 MtrunA17_Chr3g0084091 30.435 207 140 2 4 206 43 249 1.89e-25 101
Msa0722930 MtrunA17_Chr5g0429001 27.523 218 136 2 4 206 64 274 3.02e-24 98.2
Msa0722930 MtrunA17_Chr5g0407971 26.829 246 153 8 6 230 126 365 3.60e-24 99.0
Msa0722930 MtrunA17_Chr5g0428881 28.571 217 135 2 3 206 130 339 3.86e-24 99.0
Msa0722930 MtrunA17_Chr8g0334721 39.706 136 71 4 103 228 6 140 6.05e-24 94.0
Msa0722930 MtrunA17_Chr3g0114701 35.185 216 126 6 3 208 121 332 1.79e-22 94.4
Msa0722930 MtrunA17_Chr3g0129581 28.326 233 150 4 3 228 119 341 1.11e-21 91.7
Msa0722930 MtrunA17_Chr4g0051001 27.513 189 131 1 2 184 142 330 1.22e-20 88.6
Msa0722930 MtrunA17_Chr5g0407991 26.295 251 149 6 5 229 123 363 2.51e-20 88.2
Msa0722930 MtrunA17_Chr5g0408001 26.230 244 161 5 4 229 123 365 3.09e-19 85.1
Msa0722930 MtrunA17_Chr8g0369841 25.514 243 158 6 6 228 124 363 1.46e-18 83.2
Msa0722930 MtrunA17_Chr5g0408031 26.496 234 151 4 5 218 124 356 5.49e-18 81.6
Msa0722930 MtrunA17_Chr5g0408041 24.490 245 163 4 5 229 125 367 5.67e-18 81.6
Msa0722930 MtrunA17_Chr6g0451241 44.330 97 52 2 134 229 7 102 9.55e-18 76.3
Msa0722930 MtrunA17_Chr1g0211801 30.657 137 91 1 1 133 119 255 1.60e-14 70.9
Msa0722930 MtrunA17_Chr1g0177231 36.000 75 48 0 134 208 28 102 3.36e-13 64.3
Msa0722930 MtrunA17_Chr1g0172891 38.235 68 42 0 141 208 13 80 3.80e-13 63.9
Msa0722930 MtrunA17_Chr1g0211811 36.905 84 46 2 140 221 5 83 1.24e-12 62.0
Msa0722930 MtrunA17_Chr1g0150651 42.529 87 37 2 5 82 1 83 2.13e-12 61.2
Msa0722930 MtrunA17_Chr4g0050921 32.143 84 57 0 104 187 21 104 2.81e-11 59.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0722930 AT3G28070.2 39.056 233 131 4 3 229 36 263 3.49e-50 165
Msa0722930 AT3G28070.1 39.056 233 131 4 3 229 128 355 4.37e-49 164
Msa0722930 AT3G28070.5 38.528 231 131 4 5 229 1 226 1.56e-48 159
Msa0722930 AT5G40240.1 39.352 216 119 2 3 209 131 343 2.99e-46 157
Msa0722930 AT5G40240.3 39.352 216 119 2 3 209 131 343 2.99e-46 157
Msa0722930 AT5G40240.2 39.352 216 119 2 3 209 145 357 4.57e-46 157
Msa0722930 AT5G40230.1 39.912 228 129 3 3 224 132 357 3.31e-45 155
Msa0722930 AT3G28050.1 36.402 239 138 3 3 228 123 360 9.89e-45 153
Msa0722930 AT3G28100.1 39.151 212 122 3 3 208 125 335 1.46e-44 152
Msa0722930 AT3G28130.5 37.872 235 132 5 3 230 38 265 1.59e-43 147
Msa0722930 AT3G28130.1 37.872 235 132 5 3 230 38 265 1.59e-43 147
Msa0722930 AT3G28130.2 37.872 235 132 5 3 230 124 351 1.05e-42 148
Msa0722930 AT3G28080.5 37.736 212 125 3 3 208 36 246 1.12e-42 145
Msa0722930 AT3G28080.7 37.736 212 125 3 3 208 36 246 1.12e-42 145
Msa0722930 AT3G28080.8 37.736 212 125 3 3 208 36 246 1.12e-42 145
Msa0722930 AT3G28080.6 37.736 212 125 3 3 208 36 246 1.12e-42 145
Msa0722930 AT3G28130.3 37.339 233 132 5 5 230 1 226 6.16e-42 142
Msa0722930 AT3G28080.2 37.736 212 125 3 3 208 117 327 1.03e-41 145
Msa0722930 AT3G28080.1 37.736 212 125 3 3 208 125 335 1.04e-41 145
Msa0722930 AT3G28080.9 37.143 210 125 3 5 208 1 209 3.72e-41 140
Msa0722930 AT4G08300.1 37.915 211 125 3 3 207 122 332 6.06e-41 144
Msa0722930 AT4G15540.1 38.739 222 127 3 3 224 128 340 3.60e-40 141
Msa0722930 AT4G15540.2 38.739 222 127 3 3 224 128 340 3.60e-40 141
Msa0722930 AT1G44800.1 35.577 208 131 1 3 207 122 329 9.98e-40 140
Msa0722930 AT5G40210.1 36.404 228 128 5 3 228 124 336 1.20e-39 139
Msa0722930 AT1G75500.1 36.111 216 128 3 3 208 131 346 5.13e-39 139
Msa0722930 AT1G75500.2 36.111 216 128 3 3 208 131 346 5.13e-39 139
Msa0722930 AT1G43650.1 33.493 209 139 0 3 211 118 326 2.62e-38 136
Msa0722930 AT1G70260.1 34.298 242 141 3 6 229 129 370 8.65e-37 133
Msa0722930 AT3G18200.1 34.649 228 148 1 3 229 16 243 1.89e-35 126
Msa0722930 AT3G28070.3 37.234 188 111 3 3 184 128 314 3.62e-35 127
Msa0722930 AT3G53210.2 34.615 208 132 1 5 208 66 273 7.28e-35 126
Msa0722930 AT3G53210.1 34.615 208 132 1 5 208 123 330 2.44e-34 126
Msa0722930 AT3G18200.2 34.649 228 148 1 3 229 146 373 6.02e-34 125
Msa0722930 AT5G64700.1 30.901 233 148 3 3 223 119 350 2.86e-32 120
Msa0722930 AT1G60050.1 30.303 231 147 2 10 226 135 365 1.17e-31 119
Msa0722930 AT1G21890.1 28.512 242 158 2 3 229 122 363 5.09e-31 117
Msa0722930 AT4G30420.1 30.455 220 150 2 6 222 116 335 5.13e-31 117
Msa0722930 AT4G30420.2 30.455 220 150 2 6 222 126 345 5.67e-31 117
Msa0722930 AT4G01440.5 30.698 215 134 6 3 208 13 221 1.11e-30 114
Msa0722930 AT4G01440.2 30.698 215 134 6 3 208 13 221 1.11e-30 114
Msa0722930 AT4G01440.1 30.698 215 134 6 3 208 121 329 1.12e-29 114
Msa0722930 AT4G08290.1 30.973 226 144 3 3 220 124 345 3.43e-28 110
Msa0722930 AT3G30340.1 29.187 209 144 2 3 207 122 330 6.58e-28 109
Msa0722930 AT3G28080.4 32.701 211 83 3 3 208 36 192 1.21e-27 105
Msa0722930 AT1G09380.1 31.250 208 136 2 3 203 119 326 1.86e-27 108
Msa0722930 AT3G28080.3 32.701 211 83 3 3 208 125 281 7.76e-27 105
Msa0722930 AT1G68170.1 29.960 247 144 6 3 224 114 356 8.01e-27 106
Msa0722930 AT1G68170.2 29.960 247 144 6 3 224 124 366 1.08e-26 105
Msa0722930 AT2G39510.1 30.476 210 140 3 3 207 119 327 2.19e-26 105
Msa0722930 AT4G28040.1 30.275 218 142 3 6 222 124 332 5.28e-26 103
Msa0722930 AT4G28040.5 30.275 218 142 3 6 222 124 332 5.28e-26 103
Msa0722930 AT4G28040.3 30.275 218 142 3 6 222 124 332 5.28e-26 103
Msa0722930 AT4G28040.4 30.275 218 142 3 6 222 124 332 5.28e-26 103
Msa0722930 AT4G28040.2 30.275 218 142 3 6 222 124 332 5.28e-26 103
Msa0722930 AT2G40900.1 29.148 223 148 3 3 223 122 336 1.41e-25 103
Msa0722930 AT1G25270.1 29.310 232 144 6 3 221 114 338 3.03e-25 102
Msa0722930 AT1G01070.2 26.606 218 155 2 3 215 80 297 4.20e-25 100
Msa0722930 AT4G01440.3 30.890 191 117 6 3 184 121 305 4.45e-25 100
Msa0722930 AT1G01070.1 26.606 218 155 2 3 215 127 344 8.19e-25 100
Msa0722930 AT5G07050.1 30.000 220 139 3 3 209 129 346 1.85e-24 100
Msa0722930 AT1G11460.1 29.327 208 143 2 3 206 127 334 5.88e-23 95.5
Msa0722930 AT1G11450.1 27.556 225 152 5 3 221 35 254 7.83e-23 93.6
Msa0722930 AT5G45370.1 28.182 220 145 4 6 222 134 343 1.52e-22 94.7
Msa0722930 AT1G11450.5 27.556 225 152 5 3 221 83 302 2.21e-22 93.2
Msa0722930 AT1G11450.2 27.556 225 152 5 3 221 76 295 2.55e-22 93.2
Msa0722930 AT1G11450.3 26.906 223 156 4 3 221 127 346 3.09e-22 93.6
Msa0722930 AT4G19185.2 29.018 224 136 6 6 209 57 277 9.82e-22 91.7
Msa0722930 AT4G19185.1 29.018 224 136 6 6 209 135 355 1.85e-21 92.0
Msa0722930 AT2G37460.1 28.054 221 154 4 3 220 126 344 5.68e-21 90.5
Msa0722930 AT5G45370.6 28.151 238 146 7 6 222 32 265 6.25e-21 89.0
Msa0722930 AT5G45370.5 28.151 238 146 7 6 222 32 265 6.25e-21 89.0
Msa0722930 AT3G45870.5 27.830 212 138 3 4 201 49 259 8.25e-21 89.0
Msa0722930 AT5G45370.3 27.234 235 152 5 6 222 74 307 1.06e-20 89.0
Msa0722930 AT1G21890.2 27.320 194 129 1 3 184 122 315 1.16e-20 89.4
Msa0722930 AT4G01430.1 25.214 234 163 4 3 229 120 348 1.32e-20 89.4
Msa0722930 AT5G45370.2 28.151 238 146 7 6 222 134 367 1.73e-20 89.0
Msa0722930 AT5G45370.4 28.151 238 146 7 6 222 134 367 1.73e-20 89.0
Msa0722930 AT4G01430.3 24.537 216 152 3 20 229 1 211 2.24e-20 86.3
Msa0722930 AT5G13670.1 26.383 235 164 4 3 230 119 351 4.84e-20 87.8
Msa0722930 AT3G45870.1 27.619 210 137 3 6 201 126 334 1.18e-19 86.7
Msa0722930 AT2G37450.3 30.435 207 140 3 3 206 27 232 1.18e-17 79.7
Msa0722930 AT2G37450.2 30.435 207 140 3 3 206 99 304 3.41e-17 79.3
Msa0722930 AT3G56620.1 26.866 201 144 2 4 203 123 321 3.94e-17 79.7
Msa0722930 AT3G45870.2 29.577 142 99 1 60 201 43 183 2.42e-16 75.9
Msa0722930 AT3G28100.3 33.824 136 84 2 3 132 125 260 2.79e-16 76.3
Msa0722930 AT2G37450.1 29.612 206 141 3 4 206 61 265 3.87e-16 76.3
Msa0722930 AT3G53210.3 34.586 133 83 1 5 133 123 255 4.35e-16 75.5
Msa0722930 AT3G28130.4 34.694 147 82 4 3 142 124 263 9.98e-16 74.7
Msa0722930 AT3G45870.6 26.667 195 128 3 4 184 49 242 7.78e-15 72.0
Msa0722930 AT3G45870.7 26.667 195 128 3 4 184 49 242 7.78e-15 72.0
Msa0722930 AT1G11450.4 25.269 186 134 3 3 184 127 311 2.62e-14 71.2
Msa0722930 AT3G28060.1 32.407 108 71 2 78 184 48 154 4.10e-14 67.8
Msa0722930 AT3G45870.8 26.425 193 127 3 6 184 126 317 7.85e-14 69.7
Msa0722930 AT1G43650.2 30.534 131 91 0 3 133 118 248 1.07e-13 68.9
Msa0722930 AT4G01440.4 30.714 140 82 6 3 133 121 254 5.09e-13 67.0
Msa0722930 AT4G01430.2 24.339 189 136 3 3 184 120 308 1.71e-12 65.9
Msa0722930 AT4G01450.1 23.626 182 138 1 3 184 121 301 1.50e-11 63.5
Msa0722930 AT4G01450.2 25.688 218 160 2 3 220 121 336 1.53e-11 63.5
Msa0722930 AT5G64700.2 28.169 142 90 2 3 133 119 259 8.13e-11 60.8

Find 70 sgRNAs with CRISPR-Local

Find 568 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ACCAAATTTGAATTGGATTT+TGG 0.037445 5_1:+20457928 Msa0722930:CDS
CCCAAAATCCAATTCAAATT+TGG 0.154023 5_1:-20457929 None:intergenic
TTGATCTCTGACCACAATTA+AGG 0.282299 5_1:-20458193 None:intergenic
TACTATAGTTCCTATTGCTT+TGG 0.311918 5_1:-20457813 None:intergenic
TTAGGATTGAAAGAATATAT+TGG 0.312093 5_1:+20457771 Msa0722930:intron
TTCAATGTGGTACATATATC+AGG 0.347163 5_1:+20457985 Msa0722930:CDS
TTTATTCATTCCATCTTTCA+TGG 0.347498 5_1:-20455231 None:intergenic
CCTTAGCTTTGTTTATCAAC+AGG 0.352160 5_1:+20455303 Msa0722930:five_prime_UTR
ATGGGAACTAAAGCTTGATA+TGG 0.364178 5_1:+20458221 Msa0722930:CDS
TAACAGGCAATAGCTGCAAT+AGG 0.395737 5_1:+20460028 Msa0722930:intron
ATAGTTATGTGTTCTTGTTA+AGG 0.405116 5_1:-20460519 None:intergenic
CCAAAGTGCAGAGAAAGTTA+AGG 0.408072 5_1:-20455490 None:intergenic
ATGACTCTTTGCAGTTTGAT+TGG 0.423275 5_1:+20460292 Msa0722930:intron
TGTAATGGTTGTTTATTCCA+TGG 0.425563 5_1:+20455256 Msa0722930:five_prime_UTR
TCAGCACAGATAATGACTTA+TGG 0.428918 5_1:+20455867 Msa0722930:five_prime_UTR
CTTATTTATCACAATTCAAA+CGG 0.430678 5_1:+20458161 Msa0722930:CDS
AGTAGCCAAGCCAAAGCAAT+AGG 0.431540 5_1:+20457803 Msa0722930:CDS
CCTTAACTTTCTCTGCACTT+TGG 0.436623 5_1:+20455490 Msa0722930:five_prime_UTR
TGGGAACTAAAGCTTGATAT+GGG 0.448002 5_1:+20458222 Msa0722930:CDS
GCAGAGAAAGAGAGAGATGG+TGG 0.450004 5_1:+20455109 Msa0722930:five_prime_UTR
ATTAAAGTTGCCATGAAAGA+TGG 0.461241 5_1:+20455221 Msa0722930:five_prime_UTR
GATATAATCATTCCCACAAA+AGG 0.462366 5_1:-20455167 None:intergenic
AATAGGAACTATAGTATCAA+TGG 0.467878 5_1:+20457820 Msa0722930:CDS
GATGAATGTATCTTGAAGAT+TGG 0.472697 5_1:-20457878 None:intergenic
TAGTTCCTATTGCTTTGGCT+TGG 0.473979 5_1:-20457808 None:intergenic
GTAATGGTTGTTTATTCCAT+GGG 0.479195 5_1:+20455257 Msa0722930:five_prime_UTR
ATTTGTTGTCATATTATACA+AGG 0.490744 5_1:+20457850 Msa0722930:CDS
CAAAGTGCAGAGAAAGTTAA+GGG 0.497706 5_1:-20455489 None:intergenic
TTTATTAGATAAAACTCGGA+TGG 0.506084 5_1:+20456061 Msa0722930:intron
AACAGGCAATAGCTGCAATA+GGG 0.513949 5_1:+20460029 Msa0722930:intron
TTATTTATCACAATTCAAAC+GGG 0.516413 5_1:+20458162 Msa0722930:CDS
CCTGTTGATAAACAAAGCTA+AGG 0.521025 5_1:-20455303 None:intergenic
TGTGCTATGTTTAAACCGAT+CGG 0.521072 5_1:+20460103 Msa0722930:CDS
GCAAGTACAAAAGTGAAAGC+TGG 0.527966 5_1:-20455942 None:intergenic
TTAAACATAGCACAAAATAG+AGG 0.532153 5_1:-20460094 None:intergenic
TAAGGGAAGAAGCAAGATGC+TGG 0.545226 5_1:-20455285 None:intergenic
CAGAGAAAGAGAGAGATGGT+GGG 0.548363 5_1:+20455110 Msa0722930:five_prime_UTR
AAAACAGCATAGAGAGAGAG+AGG 0.549028 5_1:+20455085 Msa0722930:five_prime_UTR
TTGTAACAATGGAACAACAT+TGG 0.549077 5_1:-20460410 None:intergenic
AAGACTATGACTATTACAGC+AGG 0.552572 5_1:-20458129 None:intergenic
ACATGGTGCGTGCAAAGAGC+TGG 0.555731 5_1:+20460070 Msa0722930:CDS
GAAAGAGAGAGATGGTGGGA+TGG 0.556396 5_1:+20455114 Msa0722930:five_prime_UTR
TGAAGCTTTGCCCCATTGCA+CGG 0.560055 5_1:-20460344 None:intergenic
GGGGCAGAGAAAGAGAGAGA+TGG 0.566526 5_1:+20455106 Msa0722930:five_prime_UTR
GGAACTATAGTATCAATGGC+TGG 0.566753 5_1:+20457824 Msa0722930:CDS
GGTGCTGTTATAATCGTGGT+AGG 0.568407 5_1:+20460313 Msa0722930:CDS
TGGTCAGAGATCAAAGTGCA+TGG 0.568914 5_1:+20458202 Msa0722930:CDS
GAATGTATCTTGAAGATTGG+TGG 0.575361 5_1:-20457875 None:intergenic
CAAAAGTGAAAGCTGGAATG+AGG 0.578615 5_1:-20455935 None:intergenic
GAATTGTGATAAATAAGACT+TGG 0.583094 5_1:-20458155 None:intergenic
ATTCTTTACTTTCTTCAATG+TGG 0.587667 5_1:+20457972 Msa0722930:CDS
TGGAATGAATAAATATGTAA+TGG 0.590938 5_1:+20455241 Msa0722930:five_prime_UTR
TTTAGCTCAAAGTGGAAGCA+TGG 0.596575 5_1:+20455193 Msa0722930:five_prime_UTR
AAACAGCATAGAGAGAGAGA+GGG 0.605454 5_1:+20455086 Msa0722930:five_prime_UTR
CAAGATGCTGGAAAGTCCCA+TGG 0.607920 5_1:-20455273 None:intergenic
TTCGATACTTGTTACAAACA+TGG 0.608790 5_1:+20460053 Msa0722930:CDS
GTGGGATGGCTGAACTTGAA+TGG 0.611210 5_1:+20455128 Msa0722930:five_prime_UTR
ACGGTGAAGATTATTCCGAT+CGG 0.613970 5_1:-20460118 None:intergenic
TTTGTTGTCATATTATACAA+GGG 0.622068 5_1:+20457851 Msa0722930:CDS
GGGAGTGTATGCCTTAATTG+TGG 0.634297 5_1:+20458182 Msa0722930:CDS
GATTGGTGCTGTTATAATCG+TGG 0.634315 5_1:+20460309 Msa0722930:CDS
GGTCAGAGATCAAAGTGCAT+GGG 0.636822 5_1:+20458203 Msa0722930:CDS
CTGTTGATAAACAAAGCTAA+GGG 0.652776 5_1:-20455302 None:intergenic
ATAACATATGTACAAAGTCG+TGG 0.654026 5_1:-20455051 None:intergenic
GCACAGATAATGACTTATGG+TGG 0.656302 5_1:+20455870 Msa0722930:five_prime_UTR
AGCATTGCAGATGCAAGAGT+AGG 0.675175 5_1:-20455909 None:intergenic
AGCTCAAAGTGGAAGCATGG+TGG 0.675538 5_1:+20455196 Msa0722930:five_prime_UTR
GGGAACTAAAGCTTGATATG+GGG 0.684135 5_1:+20458223 Msa0722930:CDS
AGACTATGACTATTACAGCA+GGG 0.696834 5_1:-20458128 None:intergenic
AGTGCAGAGAAAGTTAAGGG+AGG 0.725600 5_1:-20455486 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! GAATTAATAAAATAAAAAAG+GGG - chr5_1:20455331-20455350 None:intergenic 10.0%
!! GAGAATTAATAAAATAAAAA+AGG - chr5_1:20455333-20455352 None:intergenic 10.0%
!!! GTATAATTTTTAAACTTTAT+TGG + chr5_1:20455984-20456003 Msa0722930:intron 10.0%
!!! TTTATTGATTAAAATTCATT+CGG - chr5_1:20456129-20456148 None:intergenic 10.0%
!! AATAATAATATGTAATAGAA+GGG - chr5_1:20456675-20456694 None:intergenic 10.0%
!! TTTATAAATTGTTCAATATT+TGG - chr5_1:20456955-20456974 None:intergenic 10.0%
!! AAAAAAAAATCTCAATTTAA+TGG + chr5_1:20457743-20457762 Msa0722930:intron 10.0%
!! GAATTAATAAAATAAAAAAG+GGG - chr5_1:20455331-20455350 None:intergenic 10.0%
!! GAGAATTAATAAAATAAAAA+AGG - chr5_1:20455333-20455352 None:intergenic 10.0%
!!! GTATAATTTTTAAACTTTAT+TGG + chr5_1:20455984-20456003 Msa0722930:intron 10.0%
!!! TTTATTGATTAAAATTCATT+CGG - chr5_1:20456129-20456148 None:intergenic 10.0%
!! AATAATAATATGTAATAGAA+GGG - chr5_1:20456675-20456694 None:intergenic 10.0%
!! TTTATAAATTGTTCAATATT+TGG - chr5_1:20456955-20456974 None:intergenic 10.0%
!! AAAAAAAAATCTCAATTTAA+TGG + chr5_1:20457743-20457762 Msa0722930:intron 10.0%
!!! TTTTTTTGTTTAATTTTCCT+CGG + chr5_1:20455429-20455448 Msa0722930:intron 15.0%
!! TAAAGTTTAAAAATTATACG+AGG - chr5_1:20455983-20456002 None:intergenic 15.0%
!!! AATTTTTAAACTTTATTGGA+AGG + chr5_1:20455988-20456007 Msa0722930:intron 15.0%
!!! TTCTTTTATTAGATAAAACT+CGG + chr5_1:20456057-20456076 Msa0722930:intron 15.0%
!!! TTATTGATTAAAATTCATTC+GGG - chr5_1:20456128-20456147 None:intergenic 15.0%
!! TCACAAATATAAATAAAAGA+TGG + chr5_1:20456279-20456298 Msa0722930:intron 15.0%
!!! TTTTTCATTTGTATTTGTAT+TGG + chr5_1:20456403-20456422 Msa0722930:intron 15.0%
!!! TTTGAAGTTAATTAAATGTT+GGG + chr5_1:20456559-20456578 Msa0722930:intron 15.0%
!! GAATAATAATATGTAATAGA+AGG - chr5_1:20456676-20456695 None:intergenic 15.0%
!! TCAATATGTAAATCAATATT+GGG + chr5_1:20456744-20456763 Msa0722930:intron 15.0%
!! TCAATATGTAAATCAATATT+GGG + chr5_1:20456744-20456763 Msa0722930:intron 15.0%
!!! AAAATCATATGAATTGTTTT+TGG - chr5_1:20456984-20457003 None:intergenic 15.0%
!!! CAGAAAAACAAATTTTATAT+TGG - chr5_1:20457120-20457139 None:intergenic 15.0%
!! AATAAACTAAACAATTTGAA+TGG - chr5_1:20457251-20457270 None:intergenic 15.0%
!!! TCTTTGATACTTTATTTAAA+AGG + chr5_1:20457274-20457293 Msa0722930:intron 15.0%
!!! ATTTTTAATAATGATGTATG+AGG - chr5_1:20457423-20457442 None:intergenic 15.0%
!!! ATTATTTTGTGATTTTTGTT+GGG - chr5_1:20457546-20457565 None:intergenic 15.0%
!!! AATTATTTTGTGATTTTTGT+TGG - chr5_1:20457547-20457566 None:intergenic 15.0%
!!! TTTATAAAACTTTTAAATGG+AGG + chr5_1:20457594-20457613 Msa0722930:intron 15.0%
!! TCTATAAACATGAAATTTAT+TGG + chr5_1:20458288-20458307 Msa0722930:intron 15.0%
!! CTATAAACATGAAATTTATT+GGG + chr5_1:20458289-20458308 Msa0722930:intron 15.0%
!!! ATATTATTTGAGCAATTTTT+CGG - chr5_1:20458533-20458552 None:intergenic 15.0%
!! AAAAAAAATTTGATTATGAC+AGG + chr5_1:20458676-20458695 Msa0722930:intron 15.0%
!!! AACAAATTATCATTTTTCTT+CGG - chr5_1:20459163-20459182 None:intergenic 15.0%
!!! TTTTTTTGTTTAATTTTCCT+CGG + chr5_1:20455429-20455448 Msa0722930:intron 15.0%
!! TAAAGTTTAAAAATTATACG+AGG - chr5_1:20455983-20456002 None:intergenic 15.0%
!!! AATTTTTAAACTTTATTGGA+AGG + chr5_1:20455988-20456007 Msa0722930:intron 15.0%
!!! TTCTTTTATTAGATAAAACT+CGG + chr5_1:20456057-20456076 Msa0722930:intron 15.0%
!!! TTATTGATTAAAATTCATTC+GGG - chr5_1:20456128-20456147 None:intergenic 15.0%
!! TCACAAATATAAATAAAAGA+TGG + chr5_1:20456279-20456298 Msa0722930:intron 15.0%
!!! TTTTTCATTTGTATTTGTAT+TGG + chr5_1:20456403-20456422 Msa0722930:intron 15.0%
!!! TTTGAAGTTAATTAAATGTT+GGG + chr5_1:20456559-20456578 Msa0722930:intron 15.0%
!! GAATAATAATATGTAATAGA+AGG - chr5_1:20456676-20456695 None:intergenic 15.0%
!! TCAATATGTAAATCAATATT+GGG + chr5_1:20456744-20456763 Msa0722930:intron 15.0%
!! TCAATATGTAAATCAATATT+GGG + chr5_1:20456744-20456763 Msa0722930:intron 15.0%
!!! AAAATCATATGAATTGTTTT+TGG - chr5_1:20456984-20457003 None:intergenic 15.0%
!!! CAGAAAAACAAATTTTATAT+TGG - chr5_1:20457120-20457139 None:intergenic 15.0%
!! AATAAACTAAACAATTTGAA+TGG - chr5_1:20457251-20457270 None:intergenic 15.0%
!!! TCTTTGATACTTTATTTAAA+AGG + chr5_1:20457274-20457293 Msa0722930:intron 15.0%
!!! ATTTTTAATAATGATGTATG+AGG - chr5_1:20457423-20457442 None:intergenic 15.0%
!!! ATTATTTTGTGATTTTTGTT+GGG - chr5_1:20457546-20457565 None:intergenic 15.0%
!!! AATTATTTTGTGATTTTTGT+TGG - chr5_1:20457547-20457566 None:intergenic 15.0%
!!! TTTATAAAACTTTTAAATGG+AGG + chr5_1:20457594-20457613 Msa0722930:intron 15.0%
!! TCTATAAACATGAAATTTAT+TGG + chr5_1:20458288-20458307 Msa0722930:intron 15.0%
!! CTATAAACATGAAATTTATT+GGG + chr5_1:20458289-20458308 Msa0722930:intron 15.0%
!!! ATATTATTTGAGCAATTTTT+CGG - chr5_1:20458533-20458552 None:intergenic 15.0%
!! AAAAAAAATTTGATTATGAC+AGG + chr5_1:20458676-20458695 Msa0722930:intron 15.0%
!!! AACAAATTATCATTTTTCTT+CGG - chr5_1:20459163-20459182 None:intergenic 15.0%
!! TGGAATGAATAAATATGTAA+TGG + chr5_1:20455241-20455260 Msa0722930:five_prime_UTR 20.0%
!!! AAATATGATATGTTTTGAGT+GGG - chr5_1:20455647-20455666 None:intergenic 20.0%
!!! TAAATATGATATGTTTTGAG+TGG - chr5_1:20455648-20455667 None:intergenic 20.0%
!!! ATTTTTTGTCACTTACTAAA+AGG - chr5_1:20455722-20455741 None:intergenic 20.0%
!! AATAATTTAATCCAAGAGAA+AGG - chr5_1:20455832-20455851 None:intergenic 20.0%
!!! GAAATCCATTTTTAAAATGT+GGG - chr5_1:20456089-20456108 None:intergenic 20.0%
!!! TGAAATCCATTTTTAAAATG+TGG - chr5_1:20456090-20456109 None:intergenic 20.0%
!!! ACATTTTAAAAATGGATTTC+AGG + chr5_1:20456089-20456108 Msa0722930:exon 20.0%
!!! AATAAAATCCTATTGTTTTC+AGG - chr5_1:20456206-20456225 None:intergenic 20.0%
!!! TATTTGTGAAATGAAGATTT+TGG + chr5_1:20456222-20456241 Msa0722930:intron 20.0%
!! TGAAAAAAGTTTAGACATAA+TGG - chr5_1:20456390-20456409 None:intergenic 20.0%
!!! CTTTGAAGTTAATTAAATGT+TGG + chr5_1:20456558-20456577 Msa0722930:intron 20.0%
!! TTGAAGTTAATTAAATGTTG+GGG + chr5_1:20456560-20456579 Msa0722930:intron 20.0%
!! TACATAAAGTGTAAATTAGT+AGG - chr5_1:20456621-20456640 None:intergenic 20.0%
!! CTCAATATGTAAATCAATAT+TGG + chr5_1:20456743-20456762 Msa0722930:intron 20.0%
!! AAAAAAATCTCATAAAAGCA+AGG - chr5_1:20456787-20456806 None:intergenic 20.0%
!! CTCAATATGTAAATCAATAT+TGG + chr5_1:20456743-20456762 Msa0722930:intron 20.0%
!! AAAAAAATCTCATAAAAGCA+AGG - chr5_1:20456787-20456806 None:intergenic 20.0%
!! CACAAAAAAAAATGTTAATC+TGG - chr5_1:20457033-20457052 None:intergenic 20.0%
!!! CAGATTAACATTTTTTTTTG+TGG + chr5_1:20457031-20457050 Msa0722930:intron 20.0%
!! AGAGACATCATTATTAAATT+TGG + chr5_1:20457395-20457414 Msa0722930:intron 20.0%
!! GAATTATCTCAAAAATTGTT+GGG - chr5_1:20457455-20457474 None:intergenic 20.0%
!! AGAATTATCTCAAAAATTGT+TGG - chr5_1:20457456-20457475 None:intergenic 20.0%
!! CTCAATTTAATGGTTTAATT+AGG + chr5_1:20457753-20457772 Msa0722930:intron 20.0%
!! TTAGGATTGAAAGAATATAT+TGG + chr5_1:20457771-20457790 Msa0722930:intron 20.0%
!!! ATTTGTTGTCATATTATACA+AGG + chr5_1:20457850-20457869 Msa0722930:CDS 20.0%
!!! TTTGTTGTCATATTATACAA+GGG + chr5_1:20457851-20457870 Msa0722930:CDS 20.0%
!!! AATTTTCACCAAATTTGAAT+TGG + chr5_1:20457921-20457940 Msa0722930:CDS 20.0%
!!! TACACTTTTTACCATAATAT+GGG + chr5_1:20458011-20458030 Msa0722930:intron 20.0%
!! ACATATTACTCAAAAGAAAA+AGG - chr5_1:20458038-20458057 None:intergenic 20.0%
!!! GTAATATGTTTTTTACCATA+AGG + chr5_1:20458049-20458068 Msa0722930:intron 20.0%
!! CCAAAAATTAATTTACCTTA+TGG - chr5_1:20458067-20458086 None:intergenic 20.0%
!!! CCATAAGGTAAATTAATTTT+TGG + chr5_1:20458064-20458083 Msa0722930:intron 20.0%
!! CTTATTTATCACAATTCAAA+CGG + chr5_1:20458161-20458180 Msa0722930:CDS 20.0%
!! TTATTTATCACAATTCAAAC+GGG + chr5_1:20458162-20458181 Msa0722930:CDS 20.0%
!! ATAATAAATGAATGATTACC+TGG - chr5_1:20458266-20458285 None:intergenic 20.0%
!!! GGTAGGTTTTTTTTTTTTTT+TGG + chr5_1:20458310-20458329 Msa0722930:intron 20.0%
!!! TTTTTTTTTTGGTACACTAT+TGG + chr5_1:20458321-20458340 Msa0722930:intron 20.0%
!!! TTTTTTTTTGGTACACTATT+GGG + chr5_1:20458322-20458341 Msa0722930:intron 20.0%
!!! TTTTCTCTCTTTATTGTTTT+AGG + chr5_1:20458450-20458469 Msa0722930:intron 20.0%
!! AATAAAAATCATTCAACTTG+TGG + chr5_1:20458800-20458819 Msa0722930:intron 20.0%
!!! TCATAAATCATTATTTTCTG+TGG - chr5_1:20458860-20458879 None:intergenic 20.0%
!! AAAATGTAAGCTTAATAATG+TGG - chr5_1:20458931-20458950 None:intergenic 20.0%
!!! CTACTGATTAAAAAATAGTA+CGG - chr5_1:20459320-20459339 None:intergenic 20.0%
!! AAAGAAGTAATCTTATGTAA+CGG - chr5_1:20459404-20459423 None:intergenic 20.0%
!!! ACAATAGTGTTTTAAATTAG+TGG + chr5_1:20459651-20459670 Msa0722930:intron 20.0%
!! AAAAATTGAACCCAAAAAAA+CGG - chr5_1:20460140-20460159 None:intergenic 20.0%
!!! TATACTTTGTTTTGTAACAA+TGG - chr5_1:20460424-20460443 None:intergenic 20.0%
!! TGGAATGAATAAATATGTAA+TGG + chr5_1:20455241-20455260 Msa0722930:five_prime_UTR 20.0%
!!! AAATATGATATGTTTTGAGT+GGG - chr5_1:20455647-20455666 None:intergenic 20.0%
!!! TAAATATGATATGTTTTGAG+TGG - chr5_1:20455648-20455667 None:intergenic 20.0%
!!! ATTTTTTGTCACTTACTAAA+AGG - chr5_1:20455722-20455741 None:intergenic 20.0%
!! AATAATTTAATCCAAGAGAA+AGG - chr5_1:20455832-20455851 None:intergenic 20.0%
!!! GAAATCCATTTTTAAAATGT+GGG - chr5_1:20456089-20456108 None:intergenic 20.0%
!!! TGAAATCCATTTTTAAAATG+TGG - chr5_1:20456090-20456109 None:intergenic 20.0%
!!! ACATTTTAAAAATGGATTTC+AGG + chr5_1:20456089-20456108 Msa0722930:exon 20.0%
!!! AATAAAATCCTATTGTTTTC+AGG - chr5_1:20456206-20456225 None:intergenic 20.0%
!!! TATTTGTGAAATGAAGATTT+TGG + chr5_1:20456222-20456241 Msa0722930:intron 20.0%
!! TGAAAAAAGTTTAGACATAA+TGG - chr5_1:20456390-20456409 None:intergenic 20.0%
!!! CTTTGAAGTTAATTAAATGT+TGG + chr5_1:20456558-20456577 Msa0722930:intron 20.0%
!! TTGAAGTTAATTAAATGTTG+GGG + chr5_1:20456560-20456579 Msa0722930:intron 20.0%
!! TACATAAAGTGTAAATTAGT+AGG - chr5_1:20456621-20456640 None:intergenic 20.0%
!! CTCAATATGTAAATCAATAT+TGG + chr5_1:20456743-20456762 Msa0722930:intron 20.0%
!! AAAAAAATCTCATAAAAGCA+AGG - chr5_1:20456787-20456806 None:intergenic 20.0%
!! CTCAATATGTAAATCAATAT+TGG + chr5_1:20456743-20456762 Msa0722930:intron 20.0%
!! AAAAAAATCTCATAAAAGCA+AGG - chr5_1:20456787-20456806 None:intergenic 20.0%
!! CACAAAAAAAAATGTTAATC+TGG - chr5_1:20457033-20457052 None:intergenic 20.0%
!!! CAGATTAACATTTTTTTTTG+TGG + chr5_1:20457031-20457050 Msa0722930:intron 20.0%
!! AGAGACATCATTATTAAATT+TGG + chr5_1:20457395-20457414 Msa0722930:intron 20.0%
!! GAATTATCTCAAAAATTGTT+GGG - chr5_1:20457455-20457474 None:intergenic 20.0%
!! AGAATTATCTCAAAAATTGT+TGG - chr5_1:20457456-20457475 None:intergenic 20.0%
!! CTCAATTTAATGGTTTAATT+AGG + chr5_1:20457753-20457772 Msa0722930:intron 20.0%
!! TTAGGATTGAAAGAATATAT+TGG + chr5_1:20457771-20457790 Msa0722930:intron 20.0%
!!! ATTTGTTGTCATATTATACA+AGG + chr5_1:20457850-20457869 Msa0722930:CDS 20.0%
!!! TTTGTTGTCATATTATACAA+GGG + chr5_1:20457851-20457870 Msa0722930:CDS 20.0%
!!! AATTTTCACCAAATTTGAAT+TGG + chr5_1:20457921-20457940 Msa0722930:CDS 20.0%
!!! TACACTTTTTACCATAATAT+GGG + chr5_1:20458011-20458030 Msa0722930:intron 20.0%
!! ACATATTACTCAAAAGAAAA+AGG - chr5_1:20458038-20458057 None:intergenic 20.0%
!!! GTAATATGTTTTTTACCATA+AGG + chr5_1:20458049-20458068 Msa0722930:intron 20.0%
!! CCAAAAATTAATTTACCTTA+TGG - chr5_1:20458067-20458086 None:intergenic 20.0%
!!! CCATAAGGTAAATTAATTTT+TGG + chr5_1:20458064-20458083 Msa0722930:intron 20.0%
!! CTTATTTATCACAATTCAAA+CGG + chr5_1:20458161-20458180 Msa0722930:CDS 20.0%
!! TTATTTATCACAATTCAAAC+GGG + chr5_1:20458162-20458181 Msa0722930:CDS 20.0%
!! ATAATAAATGAATGATTACC+TGG - chr5_1:20458266-20458285 None:intergenic 20.0%
!!! GGTAGGTTTTTTTTTTTTTT+TGG + chr5_1:20458310-20458329 Msa0722930:intron 20.0%
!!! TTTTTTTTTTGGTACACTAT+TGG + chr5_1:20458321-20458340 Msa0722930:intron 20.0%
!!! TTTTTTTTTGGTACACTATT+GGG + chr5_1:20458322-20458341 Msa0722930:intron 20.0%
!!! TTTTCTCTCTTTATTGTTTT+AGG + chr5_1:20458450-20458469 Msa0722930:intron 20.0%
!! AATAAAAATCATTCAACTTG+TGG + chr5_1:20458800-20458819 Msa0722930:intron 20.0%
!!! TCATAAATCATTATTTTCTG+TGG - chr5_1:20458860-20458879 None:intergenic 20.0%
!! AAAATGTAAGCTTAATAATG+TGG - chr5_1:20458931-20458950 None:intergenic 20.0%
!!! CTACTGATTAAAAAATAGTA+CGG - chr5_1:20459320-20459339 None:intergenic 20.0%
!! AAAGAAGTAATCTTATGTAA+CGG - chr5_1:20459404-20459423 None:intergenic 20.0%
!!! ACAATAGTGTTTTAAATTAG+TGG + chr5_1:20459651-20459670 Msa0722930:intron 20.0%
!! AAAAATTGAACCCAAAAAAA+CGG - chr5_1:20460140-20460159 None:intergenic 20.0%
!!! TATACTTTGTTTTGTAACAA+TGG - chr5_1:20460424-20460443 None:intergenic 20.0%
!! AAGCAAATTATTACCTTTTG+TGG + chr5_1:20455154-20455173 Msa0722930:five_prime_UTR 25.0%
!! AGCAAATTATTACCTTTTGT+GGG + chr5_1:20455155-20455174 Msa0722930:five_prime_UTR 25.0%
! TTTATTCATTCCATCTTTCA+TGG - chr5_1:20455234-20455253 None:intergenic 25.0%
!! TTATTGGAAGGTGAATTTTA+TGG + chr5_1:20456000-20456019 Msa0722930:intron 25.0%
! TTTATTAGATAAAACTCGGA+TGG + chr5_1:20456061-20456080 Msa0722930:intron 25.0%
!! AAAATGGATTTCAGGTAAAA+TGG + chr5_1:20456097-20456116 Msa0722930:intron 25.0%
! TTATCTTACCTGAAAACAAT+AGG + chr5_1:20456195-20456214 Msa0722930:intron 25.0%
! CTTCAAAGTTCAACTATTAT+TGG - chr5_1:20456546-20456565 None:intergenic 25.0%
! GTACTAAGTACTATTATATG+AGG + chr5_1:20456585-20456604 Msa0722930:intron 25.0%
! CATAAAAGCAAGGTAAATTA+TGG - chr5_1:20456777-20456796 None:intergenic 25.0%
! CATAAAAGCAAGGTAAATTA+TGG - chr5_1:20456777-20456796 None:intergenic 25.0%
! GTTAATCTGGTTAAAAAAGA+GGG - chr5_1:20457020-20457039 None:intergenic 25.0%
! TGTTAATCTGGTTAAAAAAG+AGG - chr5_1:20457021-20457040 None:intergenic 25.0%
!!! TTTTTGTGGTTTTATATGCA+TGG + chr5_1:20457045-20457064 Msa0722930:intron 25.0%
! ATACTCTAGATTACAATTTG+TGG + chr5_1:20457299-20457318 Msa0722930:intron 25.0%
! TAAAAAGAGAGAAAAGAAGA+AGG + chr5_1:20457516-20457535 Msa0722930:intron 25.0%
! AATAGGAACTATAGTATCAA+TGG + chr5_1:20457820-20457839 Msa0722930:CDS 25.0%
!! ACCAAATTTGAATTGGATTT+TGG + chr5_1:20457928-20457947 Msa0722930:CDS 25.0%
!! CCAAATTTGAATTGGATTTT+GGG + chr5_1:20457929-20457948 Msa0722930:CDS 25.0%
! ATTCTTTACTTTCTTCAATG+TGG + chr5_1:20457972-20457991 Msa0722930:CDS 25.0%
!! CATATTATGGTAAAAAGTGT+AGG - chr5_1:20458012-20458031 None:intergenic 25.0%
!!! CTACACTTTTTACCATAATA+TGG + chr5_1:20458010-20458029 Msa0722930:intron 25.0%
! GAATTGTGATAAATAAGACT+TGG - chr5_1:20458158-20458177 None:intergenic 25.0%
! AAACATGAAATTTATTGGGT+AGG + chr5_1:20458293-20458312 Msa0722930:intron 25.0%
! TGTTTAGTAGTTTGAAAAAG+AGG - chr5_1:20458557-20458576 None:intergenic 25.0%
! CTACTAAACAAAATGTAACA+CGG + chr5_1:20458567-20458586 Msa0722930:intron 25.0%
!!! TATTTAGAGAGAATTTGTTG+AGG + chr5_1:20458608-20458627 Msa0722930:intron 25.0%
!!! ATTTAGAGAGAATTTGTTGA+GGG + chr5_1:20458609-20458628 Msa0722930:intron 25.0%
! TATGATATATACTTGTAGAG+AGG + chr5_1:20458634-20458653 Msa0722930:intron 25.0%
! ATGATATATACTTGTAGAGA+GGG + chr5_1:20458635-20458654 Msa0722930:intron 25.0%
! ATTTGATTATGACAGGAATT+TGG + chr5_1:20458683-20458702 Msa0722930:intron 25.0%
!! TTTTAATCAGTAGTGCTATA+TGG + chr5_1:20459327-20459346 Msa0722930:intron 25.0%
! AAGAAGTAATCTTATGTAAC+GGG - chr5_1:20459403-20459422 None:intergenic 25.0%
! TAGTCAAAGTTATCCAATAA+TGG + chr5_1:20459471-20459490 Msa0722930:intron 25.0%
! AGTCAAAGTTATCCAATAAT+GGG + chr5_1:20459472-20459491 Msa0722930:intron 25.0%
! TTAACTAGTTATCCCATTAT+TGG - chr5_1:20459487-20459506 None:intergenic 25.0%
!!! ACTAGTTAAGTCTCATTTTT+CGG + chr5_1:20459498-20459517 Msa0722930:intron 25.0%
!! ATAAATATAGCAGAGGTATA+AGG - chr5_1:20459615-20459634 None:intergenic 25.0%
! ACACTAAATAAATATAGCAG+AGG - chr5_1:20459622-20459641 None:intergenic 25.0%
!!! AAGGGTTAAATTTGTCATTT+TGG + chr5_1:20459752-20459771 Msa0722930:intron 25.0%
! AAATAAGTGATAGGGAAAAA+AGG + chr5_1:20459778-20459797 Msa0722930:intron 25.0%
! TTAAACATAGCACAAAATAG+AGG - chr5_1:20460097-20460116 None:intergenic 25.0%
!!! AATAATCTTCACCGTTTTTT+TGG + chr5_1:20460126-20460145 Msa0722930:CDS 25.0%
!!! ATAATCTTCACCGTTTTTTT+GGG + chr5_1:20460127-20460146 Msa0722930:CDS 25.0%
!!! TTTTTGGGTTCAATTTTTCT+AGG + chr5_1:20460142-20460161 Msa0722930:CDS 25.0%
! ATAGTTATGTGTTCTTGTTA+AGG - chr5_1:20460522-20460541 None:intergenic 25.0%
!! AAGCAAATTATTACCTTTTG+TGG + chr5_1:20455154-20455173 Msa0722930:five_prime_UTR 25.0%
!! AGCAAATTATTACCTTTTGT+GGG + chr5_1:20455155-20455174 Msa0722930:five_prime_UTR 25.0%
! TTTATTCATTCCATCTTTCA+TGG - chr5_1:20455234-20455253 None:intergenic 25.0%
!! TTATTGGAAGGTGAATTTTA+TGG + chr5_1:20456000-20456019 Msa0722930:intron 25.0%
! TTTATTAGATAAAACTCGGA+TGG + chr5_1:20456061-20456080 Msa0722930:intron 25.0%
!! AAAATGGATTTCAGGTAAAA+TGG + chr5_1:20456097-20456116 Msa0722930:intron 25.0%
! TTATCTTACCTGAAAACAAT+AGG + chr5_1:20456195-20456214 Msa0722930:intron 25.0%
! CTTCAAAGTTCAACTATTAT+TGG - chr5_1:20456546-20456565 None:intergenic 25.0%
! GTACTAAGTACTATTATATG+AGG + chr5_1:20456585-20456604 Msa0722930:intron 25.0%
! CATAAAAGCAAGGTAAATTA+TGG - chr5_1:20456777-20456796 None:intergenic 25.0%
! CATAAAAGCAAGGTAAATTA+TGG - chr5_1:20456777-20456796 None:intergenic 25.0%
! GTTAATCTGGTTAAAAAAGA+GGG - chr5_1:20457020-20457039 None:intergenic 25.0%
! TGTTAATCTGGTTAAAAAAG+AGG - chr5_1:20457021-20457040 None:intergenic 25.0%
!!! TTTTTGTGGTTTTATATGCA+TGG + chr5_1:20457045-20457064 Msa0722930:intron 25.0%
! ATACTCTAGATTACAATTTG+TGG + chr5_1:20457299-20457318 Msa0722930:intron 25.0%
! TAAAAAGAGAGAAAAGAAGA+AGG + chr5_1:20457516-20457535 Msa0722930:intron 25.0%
! AATAGGAACTATAGTATCAA+TGG + chr5_1:20457820-20457839 Msa0722930:CDS 25.0%
!! ACCAAATTTGAATTGGATTT+TGG + chr5_1:20457928-20457947 Msa0722930:CDS 25.0%
!! CCAAATTTGAATTGGATTTT+GGG + chr5_1:20457929-20457948 Msa0722930:CDS 25.0%
! ATTCTTTACTTTCTTCAATG+TGG + chr5_1:20457972-20457991 Msa0722930:CDS 25.0%
!! CATATTATGGTAAAAAGTGT+AGG - chr5_1:20458012-20458031 None:intergenic 25.0%
!!! CTACACTTTTTACCATAATA+TGG + chr5_1:20458010-20458029 Msa0722930:intron 25.0%
! GAATTGTGATAAATAAGACT+TGG - chr5_1:20458158-20458177 None:intergenic 25.0%
! AAACATGAAATTTATTGGGT+AGG + chr5_1:20458293-20458312 Msa0722930:intron 25.0%
! TGTTTAGTAGTTTGAAAAAG+AGG - chr5_1:20458557-20458576 None:intergenic 25.0%
! CTACTAAACAAAATGTAACA+CGG + chr5_1:20458567-20458586 Msa0722930:intron 25.0%
!!! TATTTAGAGAGAATTTGTTG+AGG + chr5_1:20458608-20458627 Msa0722930:intron 25.0%
!!! ATTTAGAGAGAATTTGTTGA+GGG + chr5_1:20458609-20458628 Msa0722930:intron 25.0%
! TATGATATATACTTGTAGAG+AGG + chr5_1:20458634-20458653 Msa0722930:intron 25.0%
! ATGATATATACTTGTAGAGA+GGG + chr5_1:20458635-20458654 Msa0722930:intron 25.0%
! ATTTGATTATGACAGGAATT+TGG + chr5_1:20458683-20458702 Msa0722930:intron 25.0%
!! TTTTAATCAGTAGTGCTATA+TGG + chr5_1:20459327-20459346 Msa0722930:intron 25.0%
! AAGAAGTAATCTTATGTAAC+GGG - chr5_1:20459403-20459422 None:intergenic 25.0%
! TAGTCAAAGTTATCCAATAA+TGG + chr5_1:20459471-20459490 Msa0722930:intron 25.0%
! AGTCAAAGTTATCCAATAAT+GGG + chr5_1:20459472-20459491 Msa0722930:intron 25.0%
! TTAACTAGTTATCCCATTAT+TGG - chr5_1:20459487-20459506 None:intergenic 25.0%
!!! ACTAGTTAAGTCTCATTTTT+CGG + chr5_1:20459498-20459517 Msa0722930:intron 25.0%
!! ATAAATATAGCAGAGGTATA+AGG - chr5_1:20459615-20459634 None:intergenic 25.0%
! ACACTAAATAAATATAGCAG+AGG - chr5_1:20459622-20459641 None:intergenic 25.0%
!!! AAGGGTTAAATTTGTCATTT+TGG + chr5_1:20459752-20459771 Msa0722930:intron 25.0%
! AAATAAGTGATAGGGAAAAA+AGG + chr5_1:20459778-20459797 Msa0722930:intron 25.0%
! TTAAACATAGCACAAAATAG+AGG - chr5_1:20460097-20460116 None:intergenic 25.0%
!!! AATAATCTTCACCGTTTTTT+TGG + chr5_1:20460126-20460145 Msa0722930:CDS 25.0%
!!! ATAATCTTCACCGTTTTTTT+GGG + chr5_1:20460127-20460146 Msa0722930:CDS 25.0%
!!! TTTTTGGGTTCAATTTTTCT+AGG + chr5_1:20460142-20460161 Msa0722930:CDS 25.0%
! ATAGTTATGTGTTCTTGTTA+AGG - chr5_1:20460522-20460541 None:intergenic 25.0%
ATAACATATGTACAAAGTCG+TGG - chr5_1:20455054-20455073 None:intergenic 30.0%
GATATAATCATTCCCACAAA+AGG - chr5_1:20455170-20455189 None:intergenic 30.0%
!!! ATATCTGTTTTAGCTCAAAG+TGG + chr5_1:20455185-20455204 Msa0722930:five_prime_UTR 30.0%
ATTAAAGTTGCCATGAAAGA+TGG + chr5_1:20455221-20455240 Msa0722930:five_prime_UTR 30.0%
TGTAATGGTTGTTTATTCCA+TGG + chr5_1:20455256-20455275 Msa0722930:five_prime_UTR 30.0%
GTAATGGTTGTTTATTCCAT+GGG + chr5_1:20455257-20455276 Msa0722930:five_prime_UTR 30.0%
! CTGTTGATAAACAAAGCTAA+GGG - chr5_1:20455305-20455324 None:intergenic 30.0%
TGCCAATAAAAGAAGAGAAA+AGG - chr5_1:20455455-20455474 None:intergenic 30.0%
! TTTTCTCTTCTTTTATTGGC+AGG + chr5_1:20455454-20455473 Msa0722930:intron 30.0%
!! TGGATCCCACATTTTAAAAA+TGG + chr5_1:20456081-20456100 Msa0722930:exon 30.0%
!!! AAGATTTTGGAGCATATCAT+CGG + chr5_1:20456235-20456254 Msa0722930:intron 30.0%
TGTATCACATCTAAAGACAA+GGG - chr5_1:20456514-20456533 None:intergenic 30.0%
TTGTATCACATCTAAAGACA+AGG - chr5_1:20456515-20456534 None:intergenic 30.0%
AAGTTAATTAAATGTTGGGG+CGG + chr5_1:20456563-20456582 Msa0722930:intron 30.0%
! GTTTTTCTGAATCCAATCAT+TGG + chr5_1:20457131-20457150 Msa0722930:intron 30.0%
ATTATCATATCACTAGACCA+TGG - chr5_1:20457655-20457674 None:intergenic 30.0%
TACTATAGTTCCTATTGCTT+TGG - chr5_1:20457816-20457835 None:intergenic 30.0%
GATGAATGTATCTTGAAGAT+TGG - chr5_1:20457881-20457900 None:intergenic 30.0%
CCCAAAATCCAATTCAAATT+TGG - chr5_1:20457932-20457951 None:intergenic 30.0%
! AATTTGAATTGGATTTTGGG+AGG + chr5_1:20457932-20457951 Msa0722930:CDS 30.0%
!! ATTTGAATTGGATTTTGGGA+GGG + chr5_1:20457933-20457952 Msa0722930:CDS 30.0%
TTCAATGTGGTACATATATC+AGG + chr5_1:20457985-20458004 Msa0722930:CDS 30.0%
AAGAAAAAGGTCCCATATTA+TGG - chr5_1:20458025-20458044 None:intergenic 30.0%
TGAAACCTAAAATATGTAGC+GGG - chr5_1:20458094-20458113 None:intergenic 30.0%
CTGAAACCTAAAATATGTAG+CGG - chr5_1:20458095-20458114 None:intergenic 30.0%
!!! GTTGATTGTCATTTTATACC+AGG + chr5_1:20458245-20458264 Msa0722930:CDS 30.0%
!! TTTAGAGAGAATTTGTTGAG+GGG + chr5_1:20458610-20458629 Msa0722930:intron 30.0%
TGATATATACTTGTAGAGAG+GGG + chr5_1:20458636-20458655 Msa0722930:intron 30.0%
GATACTCACAATTTCTTGAA+AGG - chr5_1:20458766-20458785 None:intergenic 30.0%
! CCTTATAACTAATGGACAAA+TGG - chr5_1:20458890-20458909 None:intergenic 30.0%
CCATTTGTCCATTAGTTATA+AGG + chr5_1:20458887-20458906 Msa0722930:intron 30.0%
!! AATGATAATTTGTTCGCTCA+AGG + chr5_1:20459169-20459188 Msa0722930:intron 30.0%
TTAAAAAATAGTACGGTACG+AGG - chr5_1:20459313-20459332 None:intergenic 30.0%
AAGATTATTGCAAACTTCAG+TGG - chr5_1:20459558-20459577 None:intergenic 30.0%
!! AGTGTTTTAAATTAGTGGAG+AGG + chr5_1:20459656-20459675 Msa0722930:intron 30.0%
GAAATATGTTGTACATCAGT+CGG + chr5_1:20459682-20459701 Msa0722930:intron 30.0%
GATTTCATAGACACGTTTAA+GGG + chr5_1:20459734-20459753 Msa0722930:intron 30.0%
!! TTTTGGCTGAAATAAGTGAT+AGG + chr5_1:20459769-20459788 Msa0722930:intron 30.0%
TTTGGCTGAAATAAGTGATA+GGG + chr5_1:20459770-20459789 Msa0722930:intron 30.0%
AAGGAATGAAGGATATCATA+CGG + chr5_1:20459797-20459816 Msa0722930:intron 30.0%
TTGAATAGGTCATCTCATTT+AGG - chr5_1:20459988-20460007 None:intergenic 30.0%
! TTCGATACTTGTTACAAACA+TGG + chr5_1:20460053-20460072 Msa0722930:CDS 30.0%
AAAGCTTCAGAAGAAAAAGT+TGG + chr5_1:20460358-20460377 Msa0722930:CDS 30.0%
AAGCTTCAGAAGAAAAAGTT+GGG + chr5_1:20460359-20460378 Msa0722930:CDS 30.0%
TTGTAACAATGGAACAACAT+TGG - chr5_1:20460413-20460432 None:intergenic 30.0%
ATAACATATGTACAAAGTCG+TGG - chr5_1:20455054-20455073 None:intergenic 30.0%
GATATAATCATTCCCACAAA+AGG - chr5_1:20455170-20455189 None:intergenic 30.0%
!!! ATATCTGTTTTAGCTCAAAG+TGG + chr5_1:20455185-20455204 Msa0722930:five_prime_UTR 30.0%
ATTAAAGTTGCCATGAAAGA+TGG + chr5_1:20455221-20455240 Msa0722930:five_prime_UTR 30.0%
TGTAATGGTTGTTTATTCCA+TGG + chr5_1:20455256-20455275 Msa0722930:five_prime_UTR 30.0%
GTAATGGTTGTTTATTCCAT+GGG + chr5_1:20455257-20455276 Msa0722930:five_prime_UTR 30.0%
! CTGTTGATAAACAAAGCTAA+GGG - chr5_1:20455305-20455324 None:intergenic 30.0%
TGCCAATAAAAGAAGAGAAA+AGG - chr5_1:20455455-20455474 None:intergenic 30.0%
! TTTTCTCTTCTTTTATTGGC+AGG + chr5_1:20455454-20455473 Msa0722930:intron 30.0%
!! TGGATCCCACATTTTAAAAA+TGG + chr5_1:20456081-20456100 Msa0722930:exon 30.0%
!!! AAGATTTTGGAGCATATCAT+CGG + chr5_1:20456235-20456254 Msa0722930:intron 30.0%
TGTATCACATCTAAAGACAA+GGG - chr5_1:20456514-20456533 None:intergenic 30.0%
TTGTATCACATCTAAAGACA+AGG - chr5_1:20456515-20456534 None:intergenic 30.0%
AAGTTAATTAAATGTTGGGG+CGG + chr5_1:20456563-20456582 Msa0722930:intron 30.0%
! GTTTTTCTGAATCCAATCAT+TGG + chr5_1:20457131-20457150 Msa0722930:intron 30.0%
ATTATCATATCACTAGACCA+TGG - chr5_1:20457655-20457674 None:intergenic 30.0%
TACTATAGTTCCTATTGCTT+TGG - chr5_1:20457816-20457835 None:intergenic 30.0%
GATGAATGTATCTTGAAGAT+TGG - chr5_1:20457881-20457900 None:intergenic 30.0%
CCCAAAATCCAATTCAAATT+TGG - chr5_1:20457932-20457951 None:intergenic 30.0%
! AATTTGAATTGGATTTTGGG+AGG + chr5_1:20457932-20457951 Msa0722930:CDS 30.0%
!! ATTTGAATTGGATTTTGGGA+GGG + chr5_1:20457933-20457952 Msa0722930:CDS 30.0%
TTCAATGTGGTACATATATC+AGG + chr5_1:20457985-20458004 Msa0722930:CDS 30.0%
AAGAAAAAGGTCCCATATTA+TGG - chr5_1:20458025-20458044 None:intergenic 30.0%
TGAAACCTAAAATATGTAGC+GGG - chr5_1:20458094-20458113 None:intergenic 30.0%
CTGAAACCTAAAATATGTAG+CGG - chr5_1:20458095-20458114 None:intergenic 30.0%
!!! GTTGATTGTCATTTTATACC+AGG + chr5_1:20458245-20458264 Msa0722930:CDS 30.0%
!! TTTAGAGAGAATTTGTTGAG+GGG + chr5_1:20458610-20458629 Msa0722930:intron 30.0%
TGATATATACTTGTAGAGAG+GGG + chr5_1:20458636-20458655 Msa0722930:intron 30.0%
GATACTCACAATTTCTTGAA+AGG - chr5_1:20458766-20458785 None:intergenic 30.0%
! CCTTATAACTAATGGACAAA+TGG - chr5_1:20458890-20458909 None:intergenic 30.0%
CCATTTGTCCATTAGTTATA+AGG + chr5_1:20458887-20458906 Msa0722930:intron 30.0%
!! AATGATAATTTGTTCGCTCA+AGG + chr5_1:20459169-20459188 Msa0722930:intron 30.0%
TTAAAAAATAGTACGGTACG+AGG - chr5_1:20459313-20459332 None:intergenic 30.0%
AAGATTATTGCAAACTTCAG+TGG - chr5_1:20459558-20459577 None:intergenic 30.0%
!! AGTGTTTTAAATTAGTGGAG+AGG + chr5_1:20459656-20459675 Msa0722930:intron 30.0%
GAAATATGTTGTACATCAGT+CGG + chr5_1:20459682-20459701 Msa0722930:intron 30.0%
GATTTCATAGACACGTTTAA+GGG + chr5_1:20459734-20459753 Msa0722930:intron 30.0%
!! TTTTGGCTGAAATAAGTGAT+AGG + chr5_1:20459769-20459788 Msa0722930:intron 30.0%
TTTGGCTGAAATAAGTGATA+GGG + chr5_1:20459770-20459789 Msa0722930:intron 30.0%
AAGGAATGAAGGATATCATA+CGG + chr5_1:20459797-20459816 Msa0722930:intron 30.0%
TTGAATAGGTCATCTCATTT+AGG - chr5_1:20459988-20460007 None:intergenic 30.0%
! TTCGATACTTGTTACAAACA+TGG + chr5_1:20460053-20460072 Msa0722930:CDS 30.0%
AAAGCTTCAGAAGAAAAAGT+TGG + chr5_1:20460358-20460377 Msa0722930:CDS 30.0%
AAGCTTCAGAAGAAAAAGTT+GGG + chr5_1:20460359-20460378 Msa0722930:CDS 30.0%
TTGTAACAATGGAACAACAT+TGG - chr5_1:20460413-20460432 None:intergenic 30.0%
! CCTGTTGATAAACAAAGCTA+AGG - chr5_1:20455306-20455325 None:intergenic 35.0%
!! CCTTAGCTTTGTTTATCAAC+AGG + chr5_1:20455303-20455322 Msa0722930:five_prime_UTR 35.0%
! GGCCTTTTCTCTTCTTTTAT+TGG + chr5_1:20455450-20455469 Msa0722930:intron 35.0%
CAAAGTGCAGAGAAAGTTAA+GGG - chr5_1:20455492-20455511 None:intergenic 35.0%
! TTCTTTTTGCTTGCTCTCAT+AGG + chr5_1:20455516-20455535 Msa0722930:five_prime_UTR 35.0%
! TCTTTTTGCTTGCTCTCATA+GGG + chr5_1:20455517-20455536 Msa0722930:five_prime_UTR 35.0%
!! TATGATATGTTTTGAGTGGG+TGG - chr5_1:20455644-20455663 None:intergenic 35.0%
TTCCAAAACTTCCTTTCTCT+TGG + chr5_1:20455818-20455837 Msa0722930:intron 35.0%
! ATCCAAGAGAAAGGAAGTTT+TGG - chr5_1:20455823-20455842 None:intergenic 35.0%
TCAGCACAGATAATGACTTA+TGG + chr5_1:20455867-20455886 Msa0722930:five_prime_UTR 35.0%
!!! TTGTACTTGCACTGATTTTC+AGG + chr5_1:20455955-20455974 Msa0722930:five_prime_UTR 35.0%
CTTAGTCGTGATATTGGAAT+TGG - chr5_1:20457176-20457195 None:intergenic 35.0%
ATTCCAATATCACGACTAAG+AGG + chr5_1:20457176-20457195 Msa0722930:intron 35.0%
ATTCCTCTTAGTCGTGATAT+TGG - chr5_1:20457182-20457201 None:intergenic 35.0%
TAAATGGAGGCAAAACATCA+AGG + chr5_1:20457607-20457626 Msa0722930:intron 35.0%
GAATGTATCTTGAAGATTGG+TGG - chr5_1:20457878-20457897 None:intergenic 35.0%
! GTTTTCCCGCTACATATTTT+AGG + chr5_1:20458086-20458105 Msa0722930:intron 35.0%
AGACTATGACTATTACAGCA+GGG - chr5_1:20458131-20458150 None:intergenic 35.0%
AAGACTATGACTATTACAGC+AGG - chr5_1:20458132-20458151 None:intergenic 35.0%
TTGATCTCTGACCACAATTA+AGG - chr5_1:20458196-20458215 None:intergenic 35.0%
ATGGGAACTAAAGCTTGATA+TGG + chr5_1:20458221-20458240 Msa0722930:CDS 35.0%
TGGGAACTAAAGCTTGATAT+GGG + chr5_1:20458222-20458241 Msa0722930:CDS 35.0%
!! TTTTTGGTACACTATTGGGA+TGG + chr5_1:20458326-20458345 Msa0722930:intron 35.0%
AATTGTGAGTATCTCTGTCA+AGG + chr5_1:20458773-20458792 Msa0722930:intron 35.0%
ATTGTGAGTATCTCTGTCAA+GGG + chr5_1:20458774-20458793 Msa0722930:intron 35.0%
TGTGGTATTCCTTCTTATCT+TGG + chr5_1:20458818-20458837 Msa0722930:intron 35.0%
TTATGTGTGCCAAGATAAGA+AGG - chr5_1:20458830-20458849 None:intergenic 35.0%
TGTCCATTAGTTATAAGGAC+CGG + chr5_1:20458892-20458911 Msa0722930:intron 35.0%
TCTGCATTGCACTATATAGA+TGG - chr5_1:20459581-20459600 None:intergenic 35.0%
AAACGTGTCTATGAAATCGT+GGG - chr5_1:20459732-20459751 None:intergenic 35.0%
TAAACGTGTCTATGAAATCG+TGG - chr5_1:20459733-20459752 None:intergenic 35.0%
CGATTTCATAGACACGTTTA+AGG + chr5_1:20459733-20459752 Msa0722930:intron 35.0%
GATAGGGAAAAAAGGAATGA+AGG + chr5_1:20459786-20459805 Msa0722930:intron 35.0%
TGTGCTATGTTTAAACCGAT+CGG + chr5_1:20460103-20460122 Msa0722930:CDS 35.0%
ATGACTCTTTGCAGTTTGAT+TGG + chr5_1:20460292-20460311 Msa0722930:intron 35.0%
TCAGAAGAAAAAGTTGGGAA+AGG + chr5_1:20460364-20460383 Msa0722930:CDS 35.0%
CAGAAGAAAAAGTTGGGAAA+GGG + chr5_1:20460365-20460384 Msa0722930:CDS 35.0%
! CCTGTTGATAAACAAAGCTA+AGG - chr5_1:20455306-20455325 None:intergenic 35.0%
!! CCTTAGCTTTGTTTATCAAC+AGG + chr5_1:20455303-20455322 Msa0722930:five_prime_UTR 35.0%
! GGCCTTTTCTCTTCTTTTAT+TGG + chr5_1:20455450-20455469 Msa0722930:intron 35.0%
CAAAGTGCAGAGAAAGTTAA+GGG - chr5_1:20455492-20455511 None:intergenic 35.0%
! TTCTTTTTGCTTGCTCTCAT+AGG + chr5_1:20455516-20455535 Msa0722930:five_prime_UTR 35.0%
! TCTTTTTGCTTGCTCTCATA+GGG + chr5_1:20455517-20455536 Msa0722930:five_prime_UTR 35.0%
!! TATGATATGTTTTGAGTGGG+TGG - chr5_1:20455644-20455663 None:intergenic 35.0%
TTCCAAAACTTCCTTTCTCT+TGG + chr5_1:20455818-20455837 Msa0722930:intron 35.0%
! ATCCAAGAGAAAGGAAGTTT+TGG - chr5_1:20455823-20455842 None:intergenic 35.0%
TCAGCACAGATAATGACTTA+TGG + chr5_1:20455867-20455886 Msa0722930:five_prime_UTR 35.0%
!!! TTGTACTTGCACTGATTTTC+AGG + chr5_1:20455955-20455974 Msa0722930:five_prime_UTR 35.0%
CTTAGTCGTGATATTGGAAT+TGG - chr5_1:20457176-20457195 None:intergenic 35.0%
ATTCCAATATCACGACTAAG+AGG + chr5_1:20457176-20457195 Msa0722930:intron 35.0%
ATTCCTCTTAGTCGTGATAT+TGG - chr5_1:20457182-20457201 None:intergenic 35.0%
TAAATGGAGGCAAAACATCA+AGG + chr5_1:20457607-20457626 Msa0722930:intron 35.0%
GAATGTATCTTGAAGATTGG+TGG - chr5_1:20457878-20457897 None:intergenic 35.0%
! GTTTTCCCGCTACATATTTT+AGG + chr5_1:20458086-20458105 Msa0722930:intron 35.0%
AGACTATGACTATTACAGCA+GGG - chr5_1:20458131-20458150 None:intergenic 35.0%
AAGACTATGACTATTACAGC+AGG - chr5_1:20458132-20458151 None:intergenic 35.0%
TTGATCTCTGACCACAATTA+AGG - chr5_1:20458196-20458215 None:intergenic 35.0%
ATGGGAACTAAAGCTTGATA+TGG + chr5_1:20458221-20458240 Msa0722930:CDS 35.0%
TGGGAACTAAAGCTTGATAT+GGG + chr5_1:20458222-20458241 Msa0722930:CDS 35.0%
!! TTTTTGGTACACTATTGGGA+TGG + chr5_1:20458326-20458345 Msa0722930:intron 35.0%
AATTGTGAGTATCTCTGTCA+AGG + chr5_1:20458773-20458792 Msa0722930:intron 35.0%
ATTGTGAGTATCTCTGTCAA+GGG + chr5_1:20458774-20458793 Msa0722930:intron 35.0%
TGTGGTATTCCTTCTTATCT+TGG + chr5_1:20458818-20458837 Msa0722930:intron 35.0%
TTATGTGTGCCAAGATAAGA+AGG - chr5_1:20458830-20458849 None:intergenic 35.0%
TGTCCATTAGTTATAAGGAC+CGG + chr5_1:20458892-20458911 Msa0722930:intron 35.0%
TCTGCATTGCACTATATAGA+TGG - chr5_1:20459581-20459600 None:intergenic 35.0%
AAACGTGTCTATGAAATCGT+GGG - chr5_1:20459732-20459751 None:intergenic 35.0%
TAAACGTGTCTATGAAATCG+TGG - chr5_1:20459733-20459752 None:intergenic 35.0%
CGATTTCATAGACACGTTTA+AGG + chr5_1:20459733-20459752 Msa0722930:intron 35.0%
GATAGGGAAAAAAGGAATGA+AGG + chr5_1:20459786-20459805 Msa0722930:intron 35.0%
TGTGCTATGTTTAAACCGAT+CGG + chr5_1:20460103-20460122 Msa0722930:CDS 35.0%
ATGACTCTTTGCAGTTTGAT+TGG + chr5_1:20460292-20460311 Msa0722930:intron 35.0%
TCAGAAGAAAAAGTTGGGAA+AGG + chr5_1:20460364-20460383 Msa0722930:CDS 35.0%
CAGAAGAAAAAGTTGGGAAA+GGG + chr5_1:20460365-20460384 Msa0722930:CDS 35.0%
AAAACAGCATAGAGAGAGAG+AGG + chr5_1:20455085-20455104 Msa0722930:five_prime_UTR 40.0%
AAACAGCATAGAGAGAGAGA+GGG + chr5_1:20455086-20455105 Msa0722930:five_prime_UTR 40.0%
! TTTAGCTCAAAGTGGAAGCA+TGG + chr5_1:20455193-20455212 Msa0722930:five_prime_UTR 40.0%
TAAAAGAAGAGAAAAGGCCG+AGG - chr5_1:20455449-20455468 None:intergenic 40.0%
CCAAAGTGCAGAGAAAGTTA+AGG - chr5_1:20455493-20455512 None:intergenic 40.0%
CCTTAACTTTCTCTGCACTT+TGG + chr5_1:20455490-20455509 Msa0722930:five_prime_UTR 40.0%
GAATAATGACCTTTGCCTCA+GGG - chr5_1:20455700-20455719 None:intergenic 40.0%
GCACAGATAATGACTTATGG+TGG + chr5_1:20455870-20455889 Msa0722930:five_prime_UTR 40.0%
CAAAAGTGAAAGCTGGAATG+AGG - chr5_1:20455938-20455957 None:intergenic 40.0%
GCAAGTACAAAAGTGAAAGC+TGG - chr5_1:20455945-20455964 None:intergenic 40.0%
TCTGAATCCAATCATTGGAG+TGG + chr5_1:20457136-20457155 Msa0722930:intron 40.0%
GATATCACCACTCCAATGAT+TGG - chr5_1:20457146-20457165 None:intergenic 40.0%
CTTGATTCTATGTGATGCCA+TGG + chr5_1:20457635-20457654 Msa0722930:intron 40.0%
TAGTTCCTATTGCTTTGGCT+TGG - chr5_1:20457811-20457830 None:intergenic 40.0%
GGAACTATAGTATCAATGGC+TGG + chr5_1:20457824-20457843 Msa0722930:CDS 40.0%
GGGAACTAAAGCTTGATATG+GGG + chr5_1:20458223-20458242 Msa0722930:CDS 40.0%
! TTTTCGGTGAGACAACTTGT+TGG - chr5_1:20458517-20458536 None:intergenic 40.0%
! AACACGGCAGTATCTTTTTG+TGG + chr5_1:20458583-20458602 Msa0722930:intron 40.0%
ATATACTTGTAGAGAGGGGT+AGG + chr5_1:20458640-20458659 Msa0722930:intron 40.0%
TATACTTGTAGAGAGGGGTA+GGG + chr5_1:20458641-20458660 Msa0722930:intron 40.0%
TTGTGAGTATCTCTGTCAAG+GGG + chr5_1:20458775-20458794 Msa0722930:intron 40.0%
TGTCCGGTCCTTATAACTAA+TGG - chr5_1:20458898-20458917 None:intergenic 40.0%
ATATGTTGTACATCAGTCGG+TGG + chr5_1:20459685-20459704 Msa0722930:intron 40.0%
AATGATACAACTCATTCGCG+TGG + chr5_1:20459825-20459844 Msa0722930:intron 40.0%
TAACAGGCAATAGCTGCAAT+AGG + chr5_1:20460028-20460047 Msa0722930:intron 40.0%
AACAGGCAATAGCTGCAATA+GGG + chr5_1:20460029-20460048 Msa0722930:intron 40.0%
ACGGTGAAGATTATTCCGAT+CGG - chr5_1:20460121-20460140 None:intergenic 40.0%
! CTAGGAGACGACTTTTATCT+TGG + chr5_1:20460160-20460179 Msa0722930:CDS 40.0%
! GAGACGACTTTTATCTTGGA+AGG + chr5_1:20460164-20460183 Msa0722930:CDS 40.0%
!! GATTGGTGCTGTTATAATCG+TGG + chr5_1:20460309-20460328 Msa0722930:CDS 40.0%
! TAGGATTTTATGCCGTGCAA+TGG + chr5_1:20460332-20460351 Msa0722930:CDS 40.0%
! AGGATTTTATGCCGTGCAAT+GGG + chr5_1:20460333-20460352 Msa0722930:CDS 40.0%
AAAACAGCATAGAGAGAGAG+AGG + chr5_1:20455085-20455104 Msa0722930:five_prime_UTR 40.0%
AAACAGCATAGAGAGAGAGA+GGG + chr5_1:20455086-20455105 Msa0722930:five_prime_UTR 40.0%
! TTTAGCTCAAAGTGGAAGCA+TGG + chr5_1:20455193-20455212 Msa0722930:five_prime_UTR 40.0%
TAAAAGAAGAGAAAAGGCCG+AGG - chr5_1:20455449-20455468 None:intergenic 40.0%
CCAAAGTGCAGAGAAAGTTA+AGG - chr5_1:20455493-20455512 None:intergenic 40.0%
CCTTAACTTTCTCTGCACTT+TGG + chr5_1:20455490-20455509 Msa0722930:five_prime_UTR 40.0%
GAATAATGACCTTTGCCTCA+GGG - chr5_1:20455700-20455719 None:intergenic 40.0%
GCACAGATAATGACTTATGG+TGG + chr5_1:20455870-20455889 Msa0722930:five_prime_UTR 40.0%
CAAAAGTGAAAGCTGGAATG+AGG - chr5_1:20455938-20455957 None:intergenic 40.0%
GCAAGTACAAAAGTGAAAGC+TGG - chr5_1:20455945-20455964 None:intergenic 40.0%
TCTGAATCCAATCATTGGAG+TGG + chr5_1:20457136-20457155 Msa0722930:intron 40.0%
GATATCACCACTCCAATGAT+TGG - chr5_1:20457146-20457165 None:intergenic 40.0%
CTTGATTCTATGTGATGCCA+TGG + chr5_1:20457635-20457654 Msa0722930:intron 40.0%
TAGTTCCTATTGCTTTGGCT+TGG - chr5_1:20457811-20457830 None:intergenic 40.0%
GGAACTATAGTATCAATGGC+TGG + chr5_1:20457824-20457843 Msa0722930:CDS 40.0%
GGGAACTAAAGCTTGATATG+GGG + chr5_1:20458223-20458242 Msa0722930:CDS 40.0%
! TTTTCGGTGAGACAACTTGT+TGG - chr5_1:20458517-20458536 None:intergenic 40.0%
! AACACGGCAGTATCTTTTTG+TGG + chr5_1:20458583-20458602 Msa0722930:intron 40.0%
ATATACTTGTAGAGAGGGGT+AGG + chr5_1:20458640-20458659 Msa0722930:intron 40.0%
TATACTTGTAGAGAGGGGTA+GGG + chr5_1:20458641-20458660 Msa0722930:intron 40.0%
TTGTGAGTATCTCTGTCAAG+GGG + chr5_1:20458775-20458794 Msa0722930:intron 40.0%
TGTCCGGTCCTTATAACTAA+TGG - chr5_1:20458898-20458917 None:intergenic 40.0%
ATATGTTGTACATCAGTCGG+TGG + chr5_1:20459685-20459704 Msa0722930:intron 40.0%
AATGATACAACTCATTCGCG+TGG + chr5_1:20459825-20459844 Msa0722930:intron 40.0%
TAACAGGCAATAGCTGCAAT+AGG + chr5_1:20460028-20460047 Msa0722930:intron 40.0%
AACAGGCAATAGCTGCAATA+GGG + chr5_1:20460029-20460048 Msa0722930:intron 40.0%
ACGGTGAAGATTATTCCGAT+CGG - chr5_1:20460121-20460140 None:intergenic 40.0%
! CTAGGAGACGACTTTTATCT+TGG + chr5_1:20460160-20460179 Msa0722930:CDS 40.0%
! GAGACGACTTTTATCTTGGA+AGG + chr5_1:20460164-20460183 Msa0722930:CDS 40.0%
!! GATTGGTGCTGTTATAATCG+TGG + chr5_1:20460309-20460328 Msa0722930:CDS 40.0%
! TAGGATTTTATGCCGTGCAA+TGG + chr5_1:20460332-20460351 Msa0722930:CDS 40.0%
! AGGATTTTATGCCGTGCAAT+GGG + chr5_1:20460333-20460352 Msa0722930:CDS 40.0%
AACAGCATAGAGAGAGAGAG+GGG + chr5_1:20455087-20455106 Msa0722930:five_prime_UTR 45.0%
CAGAGAAAGAGAGAGATGGT+GGG + chr5_1:20455110-20455129 Msa0722930:five_prime_UTR 45.0%
TAAGGGAAGAAGCAAGATGC+TGG - chr5_1:20455288-20455307 None:intergenic 45.0%
AGTGCAGAGAAAGTTAAGGG+AGG - chr5_1:20455489-20455508 None:intergenic 45.0%
CCTCAGGGAAAAGTCGATTA+TGG - chr5_1:20455685-20455704 None:intergenic 45.0%
!! CCATAATCGACTTTTCCCTG+AGG + chr5_1:20455682-20455701 Msa0722930:intron 45.0%
GGAATAATGACCTTTGCCTC+AGG - chr5_1:20455701-20455720 None:intergenic 45.0%
ATCTGTGCTGAAGATCTGCA+AGG - chr5_1:20455858-20455877 None:intergenic 45.0%
AGCATTGCAGATGCAAGAGT+AGG - chr5_1:20455912-20455931 None:intergenic 45.0%
AGTAGCCAAGCCAAAGCAAT+AGG + chr5_1:20457803-20457822 Msa0722930:CDS 45.0%
! TTGGGAGGGTTTTTATGTGC+TGG + chr5_1:20457947-20457966 Msa0722930:CDS 45.0%
! GGGAGTGTATGCCTTAATTG+TGG + chr5_1:20458182-20458201 Msa0722930:CDS 45.0%
TGGTCAGAGATCAAAGTGCA+TGG + chr5_1:20458202-20458221 Msa0722930:CDS 45.0%
GGTCAGAGATCAAAGTGCAT+GGG + chr5_1:20458203-20458222 Msa0722930:CDS 45.0%
ATAAGGACCGGACAACATTC+AGG + chr5_1:20458904-20458923 Msa0722930:intron 45.0%
ATGTGGTCCTGAATGTTGTC+CGG - chr5_1:20458914-20458933 None:intergenic 45.0%
AGTAGTGCTATATGGTGCGA+AGG + chr5_1:20459335-20459354 Msa0722930:intron 45.0%
ATACAACTCATTCGCGTGGA+TGG + chr5_1:20459829-20459848 Msa0722930:intron 45.0%
GCAGCTATTGCCTGTTAACA+GGG - chr5_1:20460025-20460044 None:intergenic 45.0%
TGCAGCTATTGCCTGTTAAC+AGG - chr5_1:20460026-20460045 None:intergenic 45.0%
!! GGTGCTGTTATAATCGTGGT+AGG + chr5_1:20460313-20460332 Msa0722930:CDS 45.0%
! GGATTTTATGCCGTGCAATG+GGG + chr5_1:20460334-20460353 Msa0722930:CDS 45.0%
AACAGCATAGAGAGAGAGAG+GGG + chr5_1:20455087-20455106 Msa0722930:five_prime_UTR 45.0%
CAGAGAAAGAGAGAGATGGT+GGG + chr5_1:20455110-20455129 Msa0722930:five_prime_UTR 45.0%
TAAGGGAAGAAGCAAGATGC+TGG - chr5_1:20455288-20455307 None:intergenic 45.0%
AGTGCAGAGAAAGTTAAGGG+AGG - chr5_1:20455489-20455508 None:intergenic 45.0%
CCTCAGGGAAAAGTCGATTA+TGG - chr5_1:20455685-20455704 None:intergenic 45.0%
!! CCATAATCGACTTTTCCCTG+AGG + chr5_1:20455682-20455701 Msa0722930:intron 45.0%
GGAATAATGACCTTTGCCTC+AGG - chr5_1:20455701-20455720 None:intergenic 45.0%
ATCTGTGCTGAAGATCTGCA+AGG - chr5_1:20455858-20455877 None:intergenic 45.0%
AGCATTGCAGATGCAAGAGT+AGG - chr5_1:20455912-20455931 None:intergenic 45.0%
AGTAGCCAAGCCAAAGCAAT+AGG + chr5_1:20457803-20457822 Msa0722930:CDS 45.0%
! TTGGGAGGGTTTTTATGTGC+TGG + chr5_1:20457947-20457966 Msa0722930:CDS 45.0%
! GGGAGTGTATGCCTTAATTG+TGG + chr5_1:20458182-20458201 Msa0722930:CDS 45.0%
TGGTCAGAGATCAAAGTGCA+TGG + chr5_1:20458202-20458221 Msa0722930:CDS 45.0%
GGTCAGAGATCAAAGTGCAT+GGG + chr5_1:20458203-20458222 Msa0722930:CDS 45.0%
ATAAGGACCGGACAACATTC+AGG + chr5_1:20458904-20458923 Msa0722930:intron 45.0%
ATGTGGTCCTGAATGTTGTC+CGG - chr5_1:20458914-20458933 None:intergenic 45.0%
AGTAGTGCTATATGGTGCGA+AGG + chr5_1:20459335-20459354 Msa0722930:intron 45.0%
ATACAACTCATTCGCGTGGA+TGG + chr5_1:20459829-20459848 Msa0722930:intron 45.0%
GCAGCTATTGCCTGTTAACA+GGG - chr5_1:20460025-20460044 None:intergenic 45.0%
TGCAGCTATTGCCTGTTAAC+AGG - chr5_1:20460026-20460045 None:intergenic 45.0%
!! GGTGCTGTTATAATCGTGGT+AGG + chr5_1:20460313-20460332 Msa0722930:CDS 45.0%
! GGATTTTATGCCGTGCAATG+GGG + chr5_1:20460334-20460353 Msa0722930:CDS 45.0%
!! AGAATTAATAAAATAAAAAA+GGG - chr5_1:20455332-20455351 None:intergenic 5.0%
!!! AAATTTATAAAACTTTTAAA+TGG + chr5_1:20457591-20457610 Msa0722930:intron 5.0%
!! ATAATATACAAAAAAAATTT+AGG - chr5_1:20458488-20458507 None:intergenic 5.0%
!!! TAAATTTTTTTTGTATATTA+TGG + chr5_1:20458487-20458506 Msa0722930:intron 5.0%
!!! TACTTTTTTTTATAAATTTA+TGG - chr5_1:20459014-20459033 None:intergenic 5.0%
!! ATAACATTTAATATTAAAAA+AGG - chr5_1:20459887-20459906 None:intergenic 5.0%
!! AGAATTAATAAAATAAAAAA+GGG - chr5_1:20455332-20455351 None:intergenic 5.0%
!!! AAATTTATAAAACTTTTAAA+TGG + chr5_1:20457591-20457610 Msa0722930:intron 5.0%
!! ATAATATACAAAAAAAATTT+AGG - chr5_1:20458488-20458507 None:intergenic 5.0%
!!! TAAATTTTTTTTGTATATTA+TGG + chr5_1:20458487-20458506 Msa0722930:intron 5.0%
!!! TACTTTTTTTTATAAATTTA+TGG - chr5_1:20459014-20459033 None:intergenic 5.0%
!! ATAACATTTAATATTAAAAA+AGG - chr5_1:20459887-20459906 None:intergenic 5.0%
GCAGAGAAAGAGAGAGATGG+TGG + chr5_1:20455109-20455128 Msa0722930:five_prime_UTR 50.0%
!! GAAAGAGAGAGATGGTGGGA+TGG + chr5_1:20455114-20455133 Msa0722930:five_prime_UTR 50.0%
GTGGGATGGCTGAACTTGAA+TGG + chr5_1:20455128-20455147 Msa0722930:five_prime_UTR 50.0%
! AGCTCAAAGTGGAAGCATGG+TGG + chr5_1:20455196-20455215 Msa0722930:five_prime_UTR 50.0%
CAAGATGCTGGAAAGTCCCA+TGG - chr5_1:20455276-20455295 None:intergenic 50.0%
! TCGACTTTTCCCTGAGGCAA+AGG + chr5_1:20455688-20455707 Msa0722930:intron 50.0%
ACGGGTTTGCACGTAAAGCT+CGG - chr5_1:20459385-20459404 None:intergenic 50.0%
TCGGTAACCACCTCTTTGCA+TGG + chr5_1:20459517-20459536 Msa0722930:intron 50.0%
AACTTCAGTGGCAGCAATGG+TGG - chr5_1:20459546-20459565 None:intergenic 50.0%
GCAAACTTCAGTGGCAGCAA+TGG - chr5_1:20459549-20459568 None:intergenic 50.0%
! GAAATCGTGGGTGTTGTGCT+GGG - chr5_1:20459720-20459739 None:intergenic 50.0%
! TGAAATCGTGGGTGTTGTGC+TGG - chr5_1:20459721-20459740 None:intergenic 50.0%
TGAAGCTTTGCCCCATTGCA+CGG - chr5_1:20460347-20460366 None:intergenic 50.0%
GCAGAGAAAGAGAGAGATGG+TGG + chr5_1:20455109-20455128 Msa0722930:five_prime_UTR 50.0%
!! GAAAGAGAGAGATGGTGGGA+TGG + chr5_1:20455114-20455133 Msa0722930:five_prime_UTR 50.0%
GTGGGATGGCTGAACTTGAA+TGG + chr5_1:20455128-20455147 Msa0722930:five_prime_UTR 50.0%
! AGCTCAAAGTGGAAGCATGG+TGG + chr5_1:20455196-20455215 Msa0722930:five_prime_UTR 50.0%
CAAGATGCTGGAAAGTCCCA+TGG - chr5_1:20455276-20455295 None:intergenic 50.0%
! TCGACTTTTCCCTGAGGCAA+AGG + chr5_1:20455688-20455707 Msa0722930:intron 50.0%
ACGGGTTTGCACGTAAAGCT+CGG - chr5_1:20459385-20459404 None:intergenic 50.0%
TCGGTAACCACCTCTTTGCA+TGG + chr5_1:20459517-20459536 Msa0722930:intron 50.0%
AACTTCAGTGGCAGCAATGG+TGG - chr5_1:20459546-20459565 None:intergenic 50.0%
GCAAACTTCAGTGGCAGCAA+TGG - chr5_1:20459549-20459568 None:intergenic 50.0%
! GAAATCGTGGGTGTTGTGCT+GGG - chr5_1:20459720-20459739 None:intergenic 50.0%
! TGAAATCGTGGGTGTTGTGC+TGG - chr5_1:20459721-20459740 None:intergenic 50.0%
TGAAGCTTTGCCCCATTGCA+CGG - chr5_1:20460347-20460366 None:intergenic 50.0%
GGGGCAGAGAAAGAGAGAGA+TGG + chr5_1:20455106-20455125 Msa0722930:five_prime_UTR 55.0%
ATGGTGGCAGCCATGCAAAG+AGG - chr5_1:20459530-20459549 None:intergenic 55.0%
ACATGGTGCGTGCAAAGAGC+TGG + chr5_1:20460070-20460089 Msa0722930:CDS 55.0%
GGGGCAGAGAAAGAGAGAGA+TGG + chr5_1:20455106-20455125 Msa0722930:five_prime_UTR 55.0%
ATGGTGGCAGCCATGCAAAG+AGG - chr5_1:20459530-20459549 None:intergenic 55.0%
ACATGGTGCGTGCAAAGAGC+TGG + chr5_1:20460070-20460089 Msa0722930:CDS 55.0%
GTGGCAGCCATGCAAAGAGG+TGG - chr5_1:20459527-20459546 None:intergenic 60.0%
GTGGCAGCCATGCAAAGAGG+TGG - chr5_1:20459527-20459546 None:intergenic 60.0%
Chromosome Type Strat End Strand Name
chr5_1 gene 20455019 20460543 20455019 ID=Msa0722930;Name=Msa0722930
chr5_1 mRNA 20455019 20460543 20455019 ID=Msa0722930-mRNA-1;Parent=Msa0722930;Name=Msa0722930-mRNA-1;_AED=0.10;_eAED=0.10;_QI=514|1|1|1|0.71|0.62|8|99|230
chr5_1 exon 20455019 20455324 20455019 ID=Msa0722930-mRNA-1:exon:7755;Parent=Msa0722930-mRNA-1
chr5_1 exon 20455476 20455538 20455476 ID=Msa0722930-mRNA-1:exon:7756;Parent=Msa0722930-mRNA-1
chr5_1 exon 20455863 20455976 20455863 ID=Msa0722930-mRNA-1:exon:7757;Parent=Msa0722930-mRNA-1
chr5_1 exon 20456069 20456110 20456069 ID=Msa0722930-mRNA-1:exon:7758;Parent=Msa0722930-mRNA-1
chr5_1 exon 20457775 20458006 20457775 ID=Msa0722930-mRNA-1:exon:7759;Parent=Msa0722930-mRNA-1
chr5_1 exon 20458108 20458266 20458108 ID=Msa0722930-mRNA-1:exon:7760;Parent=Msa0722930-mRNA-1
chr5_1 exon 20460034 20460185 20460034 ID=Msa0722930-mRNA-1:exon:7761;Parent=Msa0722930-mRNA-1
chr5_1 exon 20460306 20460543 20460306 ID=Msa0722930-mRNA-1:exon:7762;Parent=Msa0722930-mRNA-1
chr5_1 five_prime_UTR 20455019 20455324 20455019 ID=Msa0722930-mRNA-1:five_prime_utr;Parent=Msa0722930-mRNA-1
chr5_1 five_prime_UTR 20455476 20455538 20455476 ID=Msa0722930-mRNA-1:five_prime_utr;Parent=Msa0722930-mRNA-1
chr5_1 five_prime_UTR 20455863 20455976 20455863 ID=Msa0722930-mRNA-1:five_prime_utr;Parent=Msa0722930-mRNA-1
chr5_1 five_prime_UTR 20456069 20456099 20456069 ID=Msa0722930-mRNA-1:five_prime_utr;Parent=Msa0722930-mRNA-1
chr5_1 CDS 20456100 20456110 20456100 ID=Msa0722930-mRNA-1:cds;Parent=Msa0722930-mRNA-1
chr5_1 CDS 20457775 20458006 20457775 ID=Msa0722930-mRNA-1:cds;Parent=Msa0722930-mRNA-1
chr5_1 CDS 20458108 20458266 20458108 ID=Msa0722930-mRNA-1:cds;Parent=Msa0722930-mRNA-1
chr5_1 CDS 20460034 20460185 20460034 ID=Msa0722930-mRNA-1:cds;Parent=Msa0722930-mRNA-1
chr5_1 CDS 20460306 20460444 20460306 ID=Msa0722930-mRNA-1:cds;Parent=Msa0722930-mRNA-1
chr5_1 three_prime_UTR 20460445 20460543 20460445 ID=Msa0722930-mRNA-1:three_prime_utr;Parent=Msa0722930-mRNA-1
Gene Sequence

>Msa0722930

ATGGATTTCAGGATTGAAAGAATATATTGGAGACACTCTAGTAGCCAAGCCAAAGCAATAGGAACTATAGTATCAATGGCTGGAGCATTTGTTGTCATATTATACAAGGGTCCACCAATCTTCAAGATACATTCATCAATTTCTTACAACACACTTCAATTTTCACCAAATTTGAATTGGATTTTGGGAGGGTTTTTATGTGCTGGAGATTCTTTACTTTCTTCAATGTGGTACATATATCAGGTTTCAGTAACAAAGAAATACCCTGCTGTAATAGTCATAGTCTTCTTCCAAGTCTTATTTATCACAATTCAAACGGGAGTGTATGCCTTAATTGTGGTCAGAGATCAAAGTGCATGGGAACTAAAGCTTGATATGGGGTTGATTGTCATTTTATACCAGGCAATAGCTGCAATAGGGATTCGATACTTGTTACAAACATGGTGCGTGCAAAGAGCTGGTCCTCTATTTTGTGCTATGTTTAAACCGATCGGAATAATCTTCACCGTTTTTTTGGGTTCAATTTTTCTAGGAGACGACTTTTATCTTGGAAGTTTGATTGGTGCTGTTATAATCGTGGTAGGATTTTATGCCGTGCAATGGGGCAAAGCTTCAGAAGAAAAAGTTGGGAAAGGGATTCAAAACTTAGAGACACAGTCCAATGTTGTTCCATTGTTACAAAACAAAGTATAA
Protein sequence

>Msa0722930

MDFRIERIYWRHSSSQAKAIGTIVSMAGAFVVILYKGPPIFKIHSSISYNTLQFSPNLNWILGGFLCAGDSLLSSMWYIYQVSVTKKYPAVIVIVFFQVLFITIQTGVYALIVVRDQSAWELKLDMGLIVILYQAIAAIGIRYLLQTWCVQRAGPLFCAMFKPIGIIFTVFLGSIFLGDDFYLGSLIGAVIIVVGFYAVQWGKASEEKVGKGIQNLETQSNVVPLLQNKV*