Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249940 | XP_013445998.1 | 93.860 | 570 | 35 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1103 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249940 | sp|O80763|NRX1_ARATH | 62.281 | 570 | 209 | 3 | 6 | 570 | 10 | 578 | 0.0 | 751 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249940 | A0A072U2K5 | 93.860 | 570 | 35 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1103 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0006700 | Msa1249940 | 0.819854 | 9.330549e-53 | -8.615850e-47 |
| Msa0007230 | Msa1249940 | 0.819024 | 1.443226e-52 | -8.615850e-47 |
| Msa0040580 | Msa1249940 | 0.802435 | 5.617880e-49 | -8.615850e-47 |
| Msa0041000 | Msa1249940 | 0.809767 | 1.607942e-50 | -8.615850e-47 |
| Msa0055280 | Msa1249940 | 0.803692 | 3.088250e-49 | -8.615850e-47 |
| Msa0055590 | Msa1249940 | 0.821308 | 4.325584e-53 | -8.615850e-47 |
| Msa0082550 | Msa1249940 | 0.809442 | 1.888660e-50 | -8.615850e-47 |
| Msa0088550 | Msa1249940 | 0.833633 | 4.768465e-56 | -8.615850e-47 |
| Msa0094100 | Msa1249940 | 0.810680 | 1.021727e-50 | -8.615850e-47 |
| Msa0101060 | Msa1249940 | 0.803622 | 3.193197e-49 | -8.615850e-47 |
| Msa0609090 | Msa1249940 | 0.800236 | 1.584207e-48 | -8.615850e-47 |
| Msa0620640 | Msa1249940 | 0.809603 | 1.743736e-50 | -8.615850e-47 |
| Msa0626230 | Msa1249940 | 0.843378 | 1.453973e-58 | -8.615850e-47 |
| Msa0630060 | Msa1249940 | 0.804339 | 2.264856e-49 | -8.615850e-47 |
| Msa0632540 | Msa1249940 | 0.803337 | 3.657237e-49 | -8.615850e-47 |
| Msa0638280 | Msa1249940 | 0.816081 | 6.645742e-52 | -8.615850e-47 |
| Msa0638320 | Msa1249940 | 0.808770 | 2.630740e-50 | -8.615850e-47 |
| Msa0640380 | Msa1249940 | 0.804052 | 2.599533e-49 | -8.615850e-47 |
| Msa0641020 | Msa1249940 | 0.812152 | 4.895351e-51 | -8.615850e-47 |
| Msa0658570 | Msa1249940 | 0.825722 | 4.014335e-54 | -8.615850e-47 |
| Msa0685880 | Msa1249940 | 0.802390 | 5.739429e-49 | -8.615850e-47 |
| Msa0686850 | Msa1249940 | 0.813763 | 2.170537e-51 | -8.615850e-47 |
| Msa0697140 | Msa1249940 | 0.808956 | 2.399990e-50 | -8.615850e-47 |
| Msa0703490 | Msa1249940 | 0.806921 | 6.504471e-50 | -8.615850e-47 |
| Msa0715720 | Msa1249940 | 0.820789 | 5.695988e-53 | -8.615850e-47 |
| Msa0718470 | Msa1249940 | 0.801394 | 9.193554e-49 | -8.615850e-47 |
| Msa0719970 | Msa1249940 | 0.805831 | 1.104201e-49 | -8.615850e-47 |
| Msa0722930 | Msa1249940 | 0.847493 | 1.117206e-59 | -8.615850e-47 |
| Msa0723140 | Msa1249940 | 0.840622 | 7.784941e-58 | -8.615850e-47 |
| Msa0752580 | Msa1249940 | 0.838204 | 3.303804e-57 | -8.615850e-47 |
| Msa0754500 | Msa1249940 | 0.831409 | 1.696980e-55 | -8.615850e-47 |
| Msa0760890 | Msa1249940 | 0.822050 | 2.913718e-53 | -8.615850e-47 |
| Msa0769390 | Msa1249940 | 0.809045 | 2.297587e-50 | -8.615850e-47 |
| Msa0789690 | Msa1249940 | 0.817948 | 2.530448e-52 | -8.615850e-47 |
| Msa0790230 | Msa1249940 | 0.806800 | 6.897135e-50 | -8.615850e-47 |
| Msa0792510 | Msa1249940 | 0.839514 | 1.514379e-57 | -8.615850e-47 |
| Msa0801100 | Msa1249940 | 0.821617 | 3.669957e-53 | -8.615850e-47 |
| Msa0830900 | Msa1249940 | 0.810100 | 1.363102e-50 | -8.615850e-47 |
| Msa0832370 | Msa1249940 | 0.800067 | 1.714636e-48 | -8.615850e-47 |
| Msa0135360 | Msa1249940 | 0.829235 | 5.766520e-55 | -8.615850e-47 |
| Msa0138230 | Msa1249940 | 0.820648 | 6.139812e-53 | -8.615850e-47 |
| Msa0138240 | Msa1249940 | 0.809701 | 1.661350e-50 | -8.615850e-47 |
| Msa0153430 | Msa1249940 | 0.814773 | 1.298572e-51 | -8.615850e-47 |
| Msa0153440 | Msa1249940 | 0.852592 | 4.173196e-61 | -8.615850e-47 |
| Msa0162050 | Msa1249940 | 0.810059 | 1.391075e-50 | -8.615850e-47 |
| Msa0175630 | Msa1249940 | 0.805153 | 1.531274e-49 | -8.615850e-47 |
| Msa0175640 | Msa1249940 | 0.804090 | 2.552062e-49 | -8.615850e-47 |
| Msa0179860 | Msa1249940 | 0.822952 | 1.798982e-53 | -8.615850e-47 |
| Msa0185640 | Msa1249940 | -0.808717 | 2.700258e-50 | -8.615850e-47 |
| Msa0193760 | Msa1249940 | 0.810294 | 1.237917e-50 | -8.615850e-47 |
| Msa0201390 | Msa1249940 | 0.809872 | 1.526411e-50 | -8.615850e-47 |
| Msa0208630 | Msa1249940 | 0.813771 | 2.161774e-51 | -8.615850e-47 |
| Msa0211670 | Msa1249940 | 0.802925 | 4.452223e-49 | -8.615850e-47 |
| Msa0227800 | Msa1249940 | 0.801119 | 1.046398e-48 | -8.615850e-47 |
| Msa0235550 | Msa1249940 | 0.806569 | 7.718990e-50 | -8.615850e-47 |
| Msa1228210 | Msa1249940 | 0.801570 | 8.459223e-49 | -8.615850e-47 |
| Msa1238490 | Msa1249940 | 0.810120 | 1.349912e-50 | -8.615850e-47 |
| Msa1248600 | Msa1249940 | 0.807073 | 6.040142e-50 | -8.615850e-47 |
| Msa1249940 | Msa1256540 | -0.807928 | 3.976587e-50 | -8.615850e-47 |
| Msa1249940 | Msa1271200 | 0.804556 | 2.040714e-49 | -8.615850e-47 |
| Msa1249940 | Msa1289670 | 0.816193 | 6.274515e-52 | -8.615850e-47 |
| Msa1249940 | Msa1296960 | -0.810717 | 1.003318e-50 | -8.615850e-47 |
| Msa1249940 | Msa1298290 | 0.801397 | 9.181900e-49 | -8.615850e-47 |
| Msa1249940 | Msa1305750 | 0.819566 | 1.085610e-52 | -8.615850e-47 |
| Msa1249940 | Msa1308480 | 0.814750 | 1.314387e-51 | -8.615850e-47 |
| Msa1249940 | Msa1327770 | 0.858865 | 6.142355e-63 | -8.615850e-47 |
| Msa1249940 | Msa1328850 | 0.823190 | 1.582500e-53 | -8.615850e-47 |
| Msa1249940 | Msa1329990 | 0.831783 | 1.372205e-55 | -8.615850e-47 |
| Msa1249940 | Msa1336480 | 0.817953 | 2.524174e-52 | -8.615850e-47 |
| Msa1249940 | Msa1343340 | 0.831818 | 1.345477e-55 | -8.615850e-47 |
| Msa1249940 | Msa1351620 | 0.818929 | 1.516889e-52 | -8.615850e-47 |
| Msa1249940 | Msa1352060 | 0.820533 | 6.524799e-53 | -8.615850e-47 |
| Msa1249940 | Msa1358870 | -0.814798 | 1.282633e-51 | -8.615850e-47 |
| Msa1249940 | Msa1373950 | 0.838868 | 2.227134e-57 | -8.615850e-47 |
| Msa1249940 | Msa1376890 | 0.814007 | 1.918546e-51 | -8.615850e-47 |
| Msa1249940 | Msa1400460 | 0.805389 | 1.366503e-49 | -8.615850e-47 |
| Msa1249940 | Msa1400470 | 0.807978 | 3.882067e-50 | -8.615850e-47 |
| Msa1249940 | Msa1405400 | 0.819318 | 1.237062e-52 | -8.615850e-47 |
| Msa1249940 | Msa1440610 | 0.801557 | 8.512938e-49 | -8.615850e-47 |
| Msa1249940 | Msa1442290 | 0.813021 | 3.160084e-51 | -8.615850e-47 |
| Msa1249940 | Msa1444060 | -0.804314 | 2.292818e-49 | -8.615850e-47 |
| Msa1249940 | Msa1445250 | 0.805538 | 1.271855e-49 | -8.615850e-47 |
| Msa1249940 | Msa1447440 | 0.843054 | 1.773707e-58 | -8.615850e-47 |
| Msa1249940 | Msa1460310 | -0.804549 | 2.047764e-49 | -8.615850e-47 |
| Msa1249940 | Msa1466810 | 0.807085 | 6.004819e-50 | -8.615850e-47 |
| Msa0371540 | Msa1249940 | 0.805418 | 1.347871e-49 | -8.615850e-47 |
| Msa0371570 | Msa1249940 | 0.816797 | 4.593790e-52 | -8.615850e-47 |
| Msa0389050 | Msa1249940 | 0.813275 | 2.779247e-51 | -8.615850e-47 |
| Msa0409820 | Msa1249940 | 0.803008 | 4.279569e-49 | -8.615850e-47 |
| Msa0411000 | Msa1249940 | 0.830771 | 2.434743e-55 | -8.615850e-47 |
| Msa0416800 | Msa1249940 | 0.800699 | 1.274942e-48 | -8.615850e-47 |
| Msa0419620 | Msa1249940 | -0.801124 | 1.044228e-48 | -8.615850e-47 |
| Msa0419970 | Msa1249940 | 0.803137 | 4.024398e-49 | -8.615850e-47 |
| Msa0419990 | Msa1249940 | 0.800274 | 1.556634e-48 | -8.615850e-47 |
| Msa0426110 | Msa1249940 | 0.812717 | 3.684757e-51 | -8.615850e-47 |
| Msa0440110 | Msa1249940 | 0.821425 | 4.066475e-53 | -8.615850e-47 |
| Msa0455230 | Msa1249940 | 0.836270 | 1.032753e-56 | -8.615850e-47 |
| Msa0457370 | Msa1249940 | 0.804203 | 2.417979e-49 | -8.615850e-47 |
| Msa0466060 | Msa1249940 | 0.806413 | 8.324434e-50 | -8.615850e-47 |
| Msa0466390 | Msa1249940 | 0.800547 | 1.369118e-48 | -8.615850e-47 |
| Msa0980440 | Msa1249940 | 0.803659 | 3.136600e-49 | -8.615850e-47 |
| Msa0996130 | Msa1249940 | 0.834530 | 2.842732e-56 | -8.615850e-47 |
| Msa1000020 | Msa1249940 | 0.811640 | 6.327650e-51 | -8.615850e-47 |
| Msa1008340 | Msa1249940 | 0.809752 | 1.619681e-50 | -8.615850e-47 |
| Msa1008490 | Msa1249940 | 0.820568 | 6.402316e-53 | -8.615850e-47 |
| Msa1009000 | Msa1249940 | 0.807746 | 4.347678e-50 | -8.615850e-47 |
| Msa1026500 | Msa1249940 | 0.838748 | 2.391279e-57 | -8.615850e-47 |
| Msa1032350 | Msa1249940 | 0.805007 | 1.643581e-49 | -8.615850e-47 |
| Msa1036390 | Msa1249940 | 0.838494 | 2.781804e-57 | -8.615850e-47 |
| Msa1049950 | Msa1249940 | 0.816415 | 5.595122e-52 | -8.615850e-47 |
| Msa1054410 | Msa1249940 | 0.813557 | 2.409955e-51 | -8.615850e-47 |
| Msa1055430 | Msa1249940 | 0.820935 | 5.273195e-53 | -8.615850e-47 |
| Msa1074570 | Msa1249940 | 0.836619 | 8.415987e-57 | -8.615850e-47 |
| Msa1076680 | Msa1249940 | 0.837492 | 5.035393e-57 | -8.615850e-47 |
| Msa1083410 | Msa1249940 | 0.813125 | 2.998537e-51 | -8.615850e-47 |
| Msa1087530 | Msa1249940 | 0.836348 | 9.864435e-57 | -8.615850e-47 |
| Msa1093310 | Msa1249940 | 0.800682 | 1.285144e-48 | -8.615850e-47 |
| Msa0242480 | Msa1249940 | 0.816388 | 5.673653e-52 | -8.615850e-47 |
| Msa0243940 | Msa1249940 | 0.816349 | 5.788354e-52 | -8.615850e-47 |
| Msa0244740 | Msa1249940 | 0.801915 | 7.187921e-49 | -8.615850e-47 |
| Msa0253370 | Msa1249940 | 0.808099 | 3.657611e-50 | -8.615850e-47 |
| Msa0265820 | Msa1249940 | 0.812474 | 4.163312e-51 | -8.615850e-47 |
| Msa0266000 | Msa1249940 | -0.802146 | 6.442225e-49 | -8.615850e-47 |
| Msa0274520 | Msa1249940 | 0.816059 | 6.720613e-52 | -8.615850e-47 |
| Msa0302990 | Msa1249940 | -0.804551 | 2.046525e-49 | -8.615850e-47 |
| Msa0304740 | Msa1249940 | 0.809679 | 1.679739e-50 | -8.615850e-47 |
| Msa0304990 | Msa1249940 | 0.824039 | 1.001388e-53 | -8.615850e-47 |
| Msa0325470 | Msa1249940 | 0.811791 | 5.867605e-51 | -8.615850e-47 |
| Msa0342340 | Msa1249940 | -0.814695 | 1.351586e-51 | -8.615850e-47 |
| Msa0362740 | Msa1249940 | 0.812096 | 5.034935e-51 | -8.615850e-47 |
| Msa0363460 | Msa1249940 | 0.838157 | 3.397318e-57 | -8.615850e-47 |
| Msa1111760 | Msa1249940 | 0.838738 | 2.405273e-57 | -8.615850e-47 |
| Msa1138450 | Msa1249940 | 0.809157 | 2.173868e-50 | -8.615850e-47 |
| Msa1139240 | Msa1249940 | 0.800516 | 1.389585e-48 | -8.615850e-47 |
| Msa1154070 | Msa1249940 | 0.840701 | 7.419822e-58 | -8.615850e-47 |
| Msa1156180 | Msa1249940 | 0.802172 | 6.363914e-49 | -8.615850e-47 |
| Msa1161760 | Msa1249940 | 0.804294 | 2.314384e-49 | -8.615850e-47 |
| Msa1166970 | Msa1249940 | 0.806827 | 6.808459e-50 | -8.615850e-47 |
| Msa1170040 | Msa1249940 | -0.808027 | 3.788549e-50 | -8.615850e-47 |
| Msa1182830 | Msa1249940 | 0.802060 | 6.711272e-49 | -8.615850e-47 |
| Msa1194940 | Msa1249940 | 0.807125 | 5.890002e-50 | -8.615850e-47 |
| Msa1195750 | Msa1249940 | 0.836606 | 8.480065e-57 | -8.615850e-47 |
| Msa1195920 | Msa1249940 | 0.805492 | 1.300517e-49 | -8.615850e-47 |
| Msa1196040 | Msa1249940 | 0.804596 | 2.002048e-49 | -8.615850e-47 |
| Msa1197020 | Msa1249940 | 0.849134 | 3.929634e-60 | -8.615850e-47 |
| Msa1201990 | Msa1249940 | 0.820316 | 7.314192e-53 | -8.615850e-47 |
| Msa1205010 | Msa1249940 | -0.803336 | 3.659034e-49 | -8.615850e-47 |
| Msa1206020 | Msa1249940 | 0.834953 | 2.224796e-56 | -8.615850e-47 |
| Msa1221200 | Msa1249940 | -0.836989 | 6.773102e-57 | -8.615850e-47 |
| Msa0488940 | Msa1249940 | 0.801164 | 1.024515e-48 | -8.615850e-47 |
| Msa0492740 | Msa1249940 | 0.819774 | 9.731619e-53 | -8.615850e-47 |
| Msa0517340 | Msa1249940 | 0.804104 | 2.535733e-49 | -8.615850e-47 |
| Msa0524890 | Msa1249940 | -0.840627 | 7.761330e-58 | -8.615850e-47 |
| Msa0528970 | Msa1249940 | 0.820959 | 5.205777e-53 | -8.615850e-47 |
| Msa0540070 | Msa1249940 | 0.816987 | 4.164902e-52 | -8.615850e-47 |
| Msa0543900 | Msa1249940 | 0.807822 | 4.189512e-50 | -8.615850e-47 |
| Msa0549740 | Msa1249940 | 0.828623 | 8.109936e-55 | -8.615850e-47 |
| Msa0553460 | Msa1249940 | 0.800053 | 1.726083e-48 | -8.615850e-47 |
| Msa0564510 | Msa1249940 | 0.822572 | 2.204701e-53 | -8.615850e-47 |
| Msa0567020 | Msa1249940 | 0.807605 | 4.659076e-50 | -8.615850e-47 |
| Msa0599770 | Msa1249940 | 0.801409 | 9.127552e-49 | -8.615850e-47 |
| Msa0843280 | Msa1249940 | 0.817043 | 4.046381e-52 | -8.615850e-47 |
| Msa0844900 | Msa1249940 | 0.806721 | 7.169379e-50 | -8.615850e-47 |
| Msa0853540 | Msa1249940 | 0.801750 | 7.769422e-49 | -8.615850e-47 |
| Msa0883350 | Msa1249940 | 0.814110 | 1.820802e-51 | -8.615850e-47 |
| Msa0883660 | Msa1249940 | 0.806861 | 6.697118e-50 | -8.615850e-47 |
| Msa0883670 | Msa1249940 | 0.804157 | 2.472285e-49 | -8.615850e-47 |
| Msa0902980 | Msa1249940 | 0.825088 | 5.670888e-54 | -8.615850e-47 |
| Msa0909710 | Msa1249940 | 0.801758 | 7.741140e-49 | -8.615850e-47 |
| Msa0922590 | Msa1249940 | 0.804307 | 2.300447e-49 | -8.615850e-47 |
| Msa0951720 | Msa1249940 | 0.835719 | 1.424231e-56 | -8.615850e-47 |
| Msa0956390 | Msa1249940 | 0.812559 | 3.988302e-51 | -8.615850e-47 |
| Msa0961420 | Msa1249940 | -0.826107 | 3.252638e-54 | -8.615850e-47 |
| Msa0961490 | Msa1249940 | 0.802331 | 5.901244e-49 | -8.615850e-47 |
| Msa0964680 | Msa1249940 | 0.805466 | 1.317107e-49 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249940 | MtrunA17_Chr8g0365761 | 93.860 | 570 | 35 | 0 | 1 | 570 | 1 | 570 | 0.0 | 1103 |
| Msa1249940 | MtrunA17_Chr8g0365791 | 86.364 | 484 | 66 | 0 | 1 | 484 | 1 | 484 | 0.0 | 863 |
| Msa1249940 | MtrunA17_Chr8g0365791 | 35.928 | 334 | 211 | 3 | 9 | 340 | 169 | 501 | 3.64e-63 | 216 |
| Msa1249940 | MtrunA17_Chr8g0365791 | 33.702 | 181 | 117 | 2 | 328 | 507 | 8 | 186 | 2.35e-33 | 133 |
| Msa1249940 | MtrunA17_Chr3g0139141 | 38.904 | 365 | 222 | 1 | 175 | 539 | 19 | 382 | 6.76e-96 | 298 |
| Msa1249940 | MtrunA17_Chr3g0139141 | 34.954 | 329 | 209 | 5 | 9 | 335 | 13 | 338 | 8.67e-63 | 211 |
| Msa1249940 | MtrunA17_Chr3g0143311 | 40.000 | 390 | 216 | 5 | 175 | 546 | 40 | 429 | 1.44e-94 | 295 |
| Msa1249940 | MtrunA17_Chr3g0143311 | 42.722 | 316 | 166 | 4 | 15 | 315 | 40 | 355 | 4.54e-82 | 263 |
| Msa1249940 | MtrunA17_Chr3g0143311 | 45.161 | 155 | 72 | 4 | 14 | 156 | 203 | 356 | 2.81e-34 | 134 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1249940 | AT1G60420.1 | 62.281 | 570 | 209 | 3 | 6 | 570 | 10 | 578 | 0.0 | 751 |
| Msa1249940 | AT4G31240.1 | 38.211 | 369 | 227 | 1 | 172 | 540 | 17 | 384 | 4.40e-93 | 291 |
| Msa1249940 | AT4G31240.1 | 34.494 | 316 | 203 | 4 | 11 | 324 | 16 | 329 | 7.63e-63 | 212 |
| Msa1249940 | AT4G31240.2 | 38.211 | 369 | 227 | 1 | 172 | 540 | 17 | 384 | 4.40e-93 | 291 |
| Msa1249940 | AT4G31240.2 | 34.494 | 316 | 203 | 4 | 11 | 324 | 16 | 329 | 7.63e-63 | 212 |
Find 160 sgRNAs with CRISPR-Local
Find 309 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CGAGGTCTGGTTGGGCTTTA+TGG | 0.070923 | 8_2:-45106034 | Msa1249940:CDS |
| CTCCCTACCTTGGTTGTTAT+TGG | 0.136370 | 8_2:-45106704 | Msa1249940:CDS |
| TATGAAATAATTTGAATCTT+TGG | 0.191450 | 8_2:-45105616 | Msa1249940:three_prime_UTR |
| GTTCACATTATCCGTGTTTA+TGG | 0.195004 | 8_2:-45107235 | Msa1249940:CDS |
| TGACTCTTCTTCATTATCTA+AGG | 0.210482 | 8_2:+45106820 | None:intergenic |
| TCCCGCAAAGAATTCATTAA+AGG | 0.224770 | 8_2:+45106183 | None:intergenic |
| AGATATAACAAGCAGATTTC+AGG | 0.242247 | 8_2:+45105700 | None:intergenic |
| ATCACAAACCCATCCATCTT+TGG | 0.250320 | 8_2:+45105742 | None:intergenic |
| GAGGTCTGGTTGGGCTTTAT+GGG | 0.250764 | 8_2:-45106033 | Msa1249940:CDS |
| ATCCCCAAGCTCGTGGCAAT+TGG | 0.257472 | 8_2:-45106088 | Msa1249940:CDS |
| TCCCTACCTTGGTTGTTATT+GGG | 0.259713 | 8_2:-45106703 | Msa1249940:CDS |
| TGTTATATCTTAGTGATTAC+TGG | 0.272154 | 8_2:-45105687 | Msa1249940:three_prime_UTR |
| GGCCCAATTGCCACGAGCTT+GGG | 0.272891 | 8_2:+45106085 | None:intergenic |
| CGTGTCTCTGAATCAGAAAA+TGG | 0.283652 | 8_2:+45107346 | None:intergenic |
| AAAAGCCTCATCATCTTTAT+CGG | 0.320709 | 8_2:+45107405 | None:intergenic |
| AACAAGGACGTCTTATTTAT+AGG | 0.337922 | 8_2:+45108898 | None:intergenic |
| TTGTCTCCCAGCGCACAATT+TGG | 0.341919 | 8_2:+45105800 | None:intergenic |
| TCTATTTAATCAAAAGCTTA+AGG | 0.343684 | 8_2:-45106897 | Msa1249940:CDS |
| GATTCAGGTGTCAGAGTTAG+AGG | 0.346328 | 8_2:-45106356 | Msa1249940:CDS |
| TGGTATGCTTCAATGAGTTT+TGG | 0.350245 | 8_2:+45106274 | None:intergenic |
| TTTGGGCTTCTCTTCTTCCT+TGG | 0.354126 | 8_2:+45105760 | None:intergenic |
| TCAAACACTTGAGTCAGTTT+TGG | 0.355313 | 8_2:-45106555 | Msa1249940:CDS |
| AACAAGCAGATTTCAGGCTT+TGG | 0.367079 | 8_2:+45105706 | None:intergenic |
| TGAAGCATACCATAAGATTA+AGG | 0.374850 | 8_2:-45106263 | Msa1249940:CDS |
| GGAGACAAAGGAAGCATAAA+TGG | 0.378642 | 8_2:-45105785 | Msa1249940:CDS |
| TGGCCCAATTGCCACGAGCT+TGG | 0.380921 | 8_2:+45106084 | None:intergenic |
| AGTCGCAAATTCAAGGTATC+TGG | 0.382318 | 8_2:-45106112 | Msa1249940:CDS |
| CCATGGCTGGCACTTCCCTT+TGG | 0.383022 | 8_2:-45106157 | Msa1249940:CDS |
| CTCTCCAAACGGTGACTTTG+AGG | 0.395188 | 8_2:-45107443 | Msa1249940:CDS |
| TCCTTTAATGAATTCTTTGC+GGG | 0.398362 | 8_2:-45106184 | Msa1249940:CDS |
| TCACAAACCCATCCATCTTT+GGG | 0.399851 | 8_2:+45105743 | None:intergenic |
| GTGAGGATGAGGGAGATAAT+TGG | 0.409851 | 8_2:-45105859 | Msa1249940:CDS |
| GATGAACTGTTTCATGTAAA+CGG | 0.411174 | 8_2:-45107313 | Msa1249940:CDS |
| CTTGCATTGCTTGATGAAGC+TGG | 0.412538 | 8_2:-45107280 | Msa1249940:CDS |
| TCAATGGCCTCAGCGGCATT+AGG | 0.415477 | 8_2:+45106659 | None:intergenic |
| TCTTCGCAACACCGGCGATC+AGG | 0.422776 | 8_2:-45108748 | Msa1249940:intron |
| AATCTTGTGCATGAGTCATC+AGG | 0.433588 | 8_2:-45105555 | Msa1249940:three_prime_UTR |
| GTTTCATGCGTCACCTTCTC+AGG | 0.435152 | 8_2:+45105935 | None:intergenic |
| GGAAAAGTTATTACTGAAGA+TGG | 0.435795 | 8_2:-45107259 | Msa1249940:CDS |
| ATCCTTTAATGAATTCTTTG+CGG | 0.438767 | 8_2:-45106185 | Msa1249940:CDS |
| GCTGAGGCCATTGAGGATCA+TGG | 0.439830 | 8_2:-45106650 | Msa1249940:CDS |
| AAAAGAAATAGAGGCACAAA+AGG | 0.441932 | 8_2:-45105978 | Msa1249940:CDS |
| GAGCTTCTTTCGTGACAGTC+TGG | 0.442158 | 8_2:+45106056 | None:intergenic |
| CGAAGAAGAAAGTCTCTATC+AGG | 0.446671 | 8_2:+45108765 | None:intergenic |
| CCAGTCCTTGAGATCGGTAT+TGG | 0.447975 | 8_2:-45107140 | Msa1249940:CDS |
| TCCCCAAGCTCGTGGCAATT+GGG | 0.449928 | 8_2:-45106087 | Msa1249940:CDS |
| AGCTTGAAGGGAAAGAAACT+TGG | 0.454943 | 8_2:-45107541 | Msa1249940:CDS |
| TCCTCTACTTCTCAGCCCAC+TGG | 0.456326 | 8_2:-45106321 | Msa1249940:CDS |
| TTCGTGACAGTCTGGCCACT+TGG | 0.457604 | 8_2:+45106064 | None:intergenic |
| CTGAGGCCATTGAGGATCAT+GGG | 0.457780 | 8_2:-45106649 | Msa1249940:CDS |
| TTTCCCTCAAGCTCAGAGAT+AGG | 0.462545 | 8_2:+45106965 | None:intergenic |
| CACGAAAGAAGCTCGAGGTC+TGG | 0.464365 | 8_2:-45106047 | Msa1249940:CDS |
| CTCCATCCAAATTGTGCGCT+GGG | 0.466966 | 8_2:-45105806 | Msa1249940:CDS |
| ACAGAATCCGCCATTGTTCG+TGG | 0.467666 | 8_2:+45108828 | None:intergenic |
| TTGGTTATCCTTGCCTCTCA+AGG | 0.468978 | 8_2:-45106771 | Msa1249940:CDS |
| CTTTGCGGGAATGCCATGGC+TGG | 0.471268 | 8_2:-45106170 | Msa1249940:CDS |
| GTTAAAATTGATAGCTTGAA+GGG | 0.473772 | 8_2:-45107553 | Msa1249940:CDS |
| AAGAAGCTCGAGGTCTGGTT+GGG | 0.474272 | 8_2:-45106042 | Msa1249940:CDS |
| ATTCTTGAGTCGCAAATTCA+AGG | 0.476921 | 8_2:-45106119 | Msa1249940:CDS |
| TTGGAAGAAAAGCACGGCAT+GGG | 0.477928 | 8_2:+45106293 | None:intergenic |
| AAGTGTTTGAGATGCCTCCT+TGG | 0.478467 | 8_2:+45106568 | None:intergenic |
| ACAACCTCAAAGTCACCGTT+TGG | 0.479366 | 8_2:+45107439 | None:intergenic |
| GGAGAGAATAAAAGAAATAG+AGG | 0.489082 | 8_2:-45105987 | Msa1249940:CDS |
| GAGCTTGAGGGAAAGACAGT+TGG | 0.489851 | 8_2:-45106956 | Msa1249940:CDS |
| TTGGTTGTTATTGGGCCAGA+TGG | 0.490790 | 8_2:-45106695 | Msa1249940:CDS |
| GGTTAAAATTGATAGCTTGA+AGG | 0.491854 | 8_2:-45107554 | Msa1249940:CDS |
| AAACATTGATGCACTTGAAG+TGG | 0.494137 | 8_2:-45106236 | Msa1249940:CDS |
| TGAACCCTTTCTGATGTGAA+AGG | 0.494644 | 8_2:+45107199 | None:intergenic |
| CTAGCTTACTTCATTTCCAT+CGG | 0.501319 | 8_2:+45107087 | None:intergenic |
| AAAGAAGCTCGAGGTCTGGT+TGG | 0.502824 | 8_2:-45106043 | Msa1249940:CDS |
| GACTTTCTTCTTCGCAACAC+CGG | 0.503020 | 8_2:-45108756 | Msa1249940:CDS |
| GATAGCCAGCCATGGCATCT+TGG | 0.503945 | 8_2:+45107369 | None:intergenic |
| CATTGACAAAGATGCGAAGA+AGG | 0.508076 | 8_2:-45106510 | Msa1249940:intron |
| GAACCCTTTCTGATGTGAAA+GGG | 0.508847 | 8_2:+45107200 | None:intergenic |
| CTCCCAGCGCACAATTTGGA+TGG | 0.511436 | 8_2:+45105804 | None:intergenic |
| ATACCTATCTCTGAGCTTGA+GGG | 0.516850 | 8_2:-45106968 | Msa1249940:CDS |
| CTGCGATGGTTGTGAGGATG+AGG | 0.519245 | 8_2:-45105870 | Msa1249940:CDS |
| CGCAATGTTTATTGCTGCGA+TGG | 0.524639 | 8_2:-45105884 | Msa1249940:CDS |
| GATACCTATCTCTGAGCTTG+AGG | 0.524940 | 8_2:-45106969 | Msa1249940:CDS |
| TCTCCATCCAAATTGTGCGC+TGG | 0.526783 | 8_2:-45105807 | Msa1249940:CDS |
| GATACCCTTTCACATCAGAA+AGG | 0.527989 | 8_2:-45107204 | Msa1249940:CDS |
| GAAGAAGAGAAGCCCAAAGA+TGG | 0.528620 | 8_2:-45105755 | Msa1249940:CDS |
| ACCAGTGGGCTGAGAAGTAG+AGG | 0.529711 | 8_2:+45106320 | None:intergenic |
| TACGATGAACTCTCTCCAAA+CGG | 0.530988 | 8_2:-45107454 | Msa1249940:CDS |
| GACTCTTCTTCATTATCTAA+GGG | 0.532377 | 8_2:+45106821 | None:intergenic |
| TTTATTCTCTCCTCAGTGAA+AGG | 0.534022 | 8_2:+45105998 | None:intergenic |
| AAGAATTAGAAAGTGTGCCT+TGG | 0.535581 | 8_2:-45106790 | Msa1249940:CDS |
| CAAAAGGATGACATTGCAAA+GGG | 0.536467 | 8_2:-45105962 | Msa1249940:CDS |
| ATACCCTTTCACATCAGAAA+GGG | 0.537407 | 8_2:-45107203 | Msa1249940:CDS |
| GCTATCAGATCTCCCTACCT+TGG | 0.538008 | 8_2:-45106714 | Msa1249940:CDS |
| TGCAAAGGGGTGGCCTGAGA+AGG | 0.540645 | 8_2:-45105948 | Msa1249940:CDS |
| GTGTCTCTGAATCAGAAAAT+GGG | 0.541094 | 8_2:+45107347 | None:intergenic |
| GAACACAGACTAGGCGAACA+AGG | 0.542322 | 8_2:+45108882 | None:intergenic |
| ATCAAGAAGAGGAAGCTAAG+AGG | 0.542413 | 8_2:-45107165 | Msa1249940:CDS |
| ATCCGTGTTTATGGAGCTGA+AGG | 0.542459 | 8_2:-45107226 | Msa1249940:CDS |
| GCCCAATTGCCACGAGCTTG+GGG | 0.546174 | 8_2:+45106086 | None:intergenic |
| AAGAGAAGCCCAAAGATGGA+TGG | 0.550982 | 8_2:-45105751 | Msa1249940:CDS |
| TGGTTGTTATTGGGCCAGAT+GGG | 0.552045 | 8_2:-45106694 | Msa1249940:CDS |
| AGAGTTGAAAGATCAAGAAG+AGG | 0.554619 | 8_2:-45107176 | Msa1249940:CDS |
| ATCAACCCCATGATCCTCAA+TGG | 0.561806 | 8_2:+45106643 | None:intergenic |
| GGACGTCTTATTTATAGGAG+TGG | 0.562679 | 8_2:+45108903 | None:intergenic |
| GTATTGAATTAGTTTCGCAC+AGG | 0.568373 | 8_2:+45106742 | None:intergenic |
| AGGTCTGGTTGGGCTTTATG+GGG | 0.570437 | 8_2:-45106032 | Msa1249940:CDS |
| TAATGCCGCTGAGGCCATTG+AGG | 0.572119 | 8_2:-45106657 | Msa1249940:CDS |
| TCATGGTGTGGTCCGTGTCG+AGG | 0.572429 | 8_2:-45107502 | Msa1249940:CDS |
| GGCCCAATAACAACCAAGGT+AGG | 0.575985 | 8_2:+45106701 | None:intergenic |
| TTACATGAAACAGTTCATCA+AGG | 0.576778 | 8_2:+45107317 | None:intergenic |
| AGAGAAGCCCAAAGATGGAT+GGG | 0.577163 | 8_2:-45105750 | Msa1249940:CDS |
| AATTGTGCGCTGGGAGACAA+AGG | 0.578428 | 8_2:-45105797 | Msa1249940:CDS |
| TTTGGAAGAAAAGCACGGCA+TGG | 0.578921 | 8_2:+45106292 | None:intergenic |
| TGGAAGAAAAGCACGGCATG+GGG | 0.579522 | 8_2:+45106294 | None:intergenic |
| ATTCAGGTGTCAGAGTTAGA+GGG | 0.579909 | 8_2:-45106355 | Msa1249940:CDS |
| CACTCACTCTCCACGAACAA+TGG | 0.579999 | 8_2:-45108838 | Msa1249940:exon |
| ATTCACTCCAACGTTGGTGG+AGG | 0.582019 | 8_2:-45107479 | Msa1249940:CDS |
| CTCGTGGCAATTGGGCCAAG+TGG | 0.588439 | 8_2:-45106079 | Msa1249940:CDS |
| ATTTAATCAAAAGCTTAAGG+AGG | 0.590041 | 8_2:-45106894 | Msa1249940:CDS |
| GCCCAATAACAACCAAGGTA+GGG | 0.594443 | 8_2:+45106702 | None:intergenic |
| TCGAGGATTCACTCCAACGT+TGG | 0.595933 | 8_2:-45107485 | Msa1249940:CDS |
| CGATGAAATAGCAAAGGCCA+AGG | 0.596494 | 8_2:-45106585 | Msa1249940:CDS |
| CCAATACCGATCTCAAGGAC+TGG | 0.597503 | 8_2:+45107140 | None:intergenic |
| GAGGAACCAGTCCTTGAGAT+CGG | 0.598222 | 8_2:-45107146 | Msa1249940:CDS |
| CACAAAGTCACGGGAACGAG+AGG | 0.599551 | 8_2:+45107117 | None:intergenic |
| GACTTTGTGATATCATCCGA+TGG | 0.599839 | 8_2:-45107103 | Msa1249940:CDS |
| AGGAAGCATAAATGGTGCCA+AGG | 0.600015 | 8_2:-45105777 | Msa1249940:CDS |
| TTCAGGTGTCAGAGTTAGAG+GGG | 0.601142 | 8_2:-45106354 | Msa1249940:CDS |
| ACAAAAGGATGACATTGCAA+AGG | 0.603905 | 8_2:-45105963 | Msa1249940:CDS |
| AGGATTCACTCCAACGTTGG+TGG | 0.604343 | 8_2:-45107482 | Msa1249940:CDS |
| AAAGATGGATGGGTTTGTGA+TGG | 0.605439 | 8_2:-45105740 | Msa1249940:CDS |
| AGAGGCCAATACCGATCTCA+AGG | 0.608936 | 8_2:+45107135 | None:intergenic |
| GGATGATATCACAAAGTCAC+GGG | 0.610022 | 8_2:+45107108 | None:intergenic |
| AAACAAGAAGAACACAGACT+AGG | 0.610971 | 8_2:+45108873 | None:intergenic |
| CGGATGATATCACAAAGTCA+CGG | 0.612088 | 8_2:+45107107 | None:intergenic |
| CTCAGCCGATAAAGATGATG+AGG | 0.619000 | 8_2:-45107410 | Msa1249940:CDS |
| TCATCAAGCAATGCAAGATG+AGG | 0.620375 | 8_2:+45107286 | None:intergenic |
| CCAAAGGGAAGTGCCAGCCA+TGG | 0.621888 | 8_2:+45106157 | None:intergenic |
| ATGATCCTCAATGGCCTCAG+CGG | 0.626422 | 8_2:+45106652 | None:intergenic |
| AATTCTTTGCGGGAATGCCA+TGG | 0.628513 | 8_2:-45106174 | Msa1249940:CDS |
| CAGTTGTAGTACCTGATCGC+CGG | 0.631584 | 8_2:+45108737 | None:intergenic |
| AGGATGACATTGCAAAGGGG+TGG | 0.634262 | 8_2:-45105958 | Msa1249940:CDS |
| ATCCTTCAGCTCCATAAACA+CGG | 0.636117 | 8_2:+45107224 | None:intergenic |
| ATCTGGCATCCCCAAGCTCG+TGG | 0.647534 | 8_2:-45106095 | Msa1249940:CDS |
| TGAACTCGATGAAATAGCAA+AGG | 0.647912 | 8_2:-45106591 | Msa1249940:CDS |
| AGTGGGCTGAGAAGTAGAGG+AGG | 0.655615 | 8_2:+45106323 | None:intergenic |
| TCACTCTCCACGAACAATGG+CGG | 0.656243 | 8_2:-45108835 | Msa1249940:exon |
| ATCTGGCCCAATAACAACCA+AGG | 0.657451 | 8_2:+45106697 | None:intergenic |
| TGAGGCCATTGAGGATCATG+GGG | 0.663531 | 8_2:-45106648 | Msa1249940:CDS |
| GAAAATGGGATAGCCAGCCA+TGG | 0.663538 | 8_2:+45107361 | None:intergenic |
| TTATTGCTGCGATGGTTGTG+AGG | 0.670136 | 8_2:-45105876 | Msa1249940:CDS |
| ATTTATAGGAGTGGAAAGCG+TGG | 0.675779 | 8_2:+45108912 | None:intergenic |
| TCTACATCCTAATGCCGCTG+AGG | 0.677477 | 8_2:-45106666 | Msa1249940:CDS |
| TGAAATAGCAAAGGCCAAGG+AGG | 0.686521 | 8_2:-45106582 | Msa1249940:CDS |
| TGCGATGGTTGTGAGGATGA+GGG | 0.687770 | 8_2:-45105869 | Msa1249940:CDS |
| ACTGTCACGAAAGAAGCTCG+AGG | 0.699376 | 8_2:-45106052 | Msa1249940:CDS |
| TATAGGAGTGGAAAGCGTGG+AGG | 0.701516 | 8_2:+45108915 | None:intergenic |
| TTGAGAGGCAAGGATAACCA+AGG | 0.706344 | 8_2:+45106773 | None:intergenic |
| TCGTAGACCTCCACCAACGT+TGG | 0.707472 | 8_2:+45107472 | None:intergenic |
| GGAAGAAAAGCACGGCATGG+GGG | 0.711566 | 8_2:+45106295 | None:intergenic |
| AAAAGGATGACATTGCAAAG+GGG | 0.748471 | 8_2:-45105961 | Msa1249940:CDS |
| GTTGGAGTGAATCCTCGACA+CGG | 0.764812 | 8_2:+45107490 | None:intergenic |
| AGATGCTTATCCTTTCACTG+AGG | 0.785205 | 8_2:-45106008 | Msa1249940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAATTATTAGG+GGG | - | chr8_2:45106633-45106652 | Msa1249940:CDS | 10.0% |
| !! | TTAATAACAAATTAAAAAGA+GGG | + | chr8_2:45108049-45108068 | None:intergenic | 10.0% |
| !! | ATTAATAACAAATTAAAAAG+AGG | + | chr8_2:45108050-45108069 | None:intergenic | 10.0% |
| !!! | AAACAAAACTATACAATTTT+TGG | - | chr8_2:45105885-45105904 | Msa1249940:CDS | 15.0% |
| !! | ATGTTGGTATATAATATATT+TGG | + | chr8_2:45106487-45106506 | None:intergenic | 15.0% |
| !! | TATGAAATAATTTGAATCTT+TGG | - | chr8_2:45108861-45108880 | Msa1249940:five_prime_UTR | 15.0% |
| !! | TTCATAAAACACAACAAAAA+AGG | + | chr8_2:45105794-45105813 | None:intergenic | 20.0% |
| !!! | ATAAATTGGATTTGAAATGA+GGG | + | chr8_2:45106237-45106256 | None:intergenic | 20.0% |
| !!! | TATAAATTGGATTTGAAATG+AGG | + | chr8_2:45106238-45106257 | None:intergenic | 20.0% |
| !! | TTCTTTCAAAAAAGTGAATT+CGG | - | chr8_2:45106328-45106347 | Msa1249940:CDS | 20.0% |
| !! | GTTGGAAATATATAGAAAAA+TGG | + | chr8_2:45106713-45106732 | None:intergenic | 20.0% |
| !!! | TCTCATATTTTGAAATTTAC+AGG | - | chr8_2:45106902-45106921 | Msa1249940:CDS | 20.0% |
| !! | TCTATTTAATCAAAAGCTTA+AGG | - | chr8_2:45107580-45107599 | Msa1249940:intron | 20.0% |
| ! | TTAATTGCATATATGCAACA+AGG | + | chr8_2:45105976-45105995 | None:intergenic | 25.0% |
| ! | TTGTTGCATATATGCAATTA+AGG | - | chr8_2:45105975-45105994 | Msa1249940:CDS | 25.0% |
| ! | TGTTGCATATATGCAATTAA+GGG | - | chr8_2:45105976-45105995 | Msa1249940:CDS | 25.0% |
| !! | TAAATTGGATTTGAAATGAG+GGG | + | chr8_2:45106236-45106255 | None:intergenic | 25.0% |
| !!! | CTATTGTGGTGATATTTTTT+TGG | + | chr8_2:45106443-45106462 | None:intergenic | 25.0% |
| !! | TGAAAACTTAGACTTTGTTT+GGG | + | chr8_2:45106771-45106790 | None:intergenic | 25.0% |
| ! | ATGAAAACTTAGACTTTGTT+TGG | + | chr8_2:45106772-45106791 | None:intergenic | 25.0% |
| ! | TTTATGACAGTTATTTGAAG+TGG | - | chr8_2:45106830-45106849 | Msa1249940:CDS | 25.0% |
| !! | GTTAAAATTGATAGCTTGAA+GGG | - | chr8_2:45106924-45106943 | Msa1249940:CDS | 25.0% |
| ! | TTAACTCAGTATGATATAGT+AGG | - | chr8_2:45107417-45107436 | Msa1249940:CDS | 25.0% |
| ! | AACAACCAGATAATAACAAA+AGG | + | chr8_2:45107445-45107464 | None:intergenic | 25.0% |
| !!! | TTTGTTATTATCTGGTTGTT+TGG | - | chr8_2:45107445-45107464 | Msa1249940:CDS | 25.0% |
| !!! | TTTTGATTAAATAGAGTGCA+TGG | + | chr8_2:45107575-45107594 | None:intergenic | 25.0% |
| ! | ATTTAATCAAAAGCTTAAGG+AGG | - | chr8_2:45107583-45107602 | Msa1249940:intron | 25.0% |
| ! | ATCTTGCAACATAAATTTAC+TGG | - | chr8_2:45107996-45108015 | Msa1249940:intron | 25.0% |
| ! | AATTAAAAAGAGGGAATGAT+GGG | + | chr8_2:45108040-45108059 | None:intergenic | 25.0% |
| ! | AAATTAAAAAGAGGGAATGA+TGG | + | chr8_2:45108041-45108060 | None:intergenic | 25.0% |
| ! | ATCCTTTAATGAATTCTTTG+CGG | - | chr8_2:45108292-45108311 | Msa1249940:intron | 25.0% |
| ! | TGTTATATCTTAGTGATTAC+TGG | - | chr8_2:45108790-45108809 | Msa1249940:CDS | 25.0% |
| ! | AATCTTTGGATATTGTGATA+TGG | - | chr8_2:45108875-45108894 | Msa1249940:five_prime_UTR | 25.0% |
| !! | AGGAGAATAACCATAATTTT+TGG | + | chr8_2:45108948-45108967 | None:intergenic | 25.0% |
| !! | AACAAGGACGTCTTATTTAT+AGG | + | chr8_2:45105582-45105601 | None:intergenic | 30.0% |
| AAAAAGGAGAAGAGAAGTAA+CGG | + | chr8_2:45105778-45105797 | None:intergenic | 30.0% | |
| TGGAAGAAATAGAAGACATT+GGG | - | chr8_2:45106165-45106184 | Msa1249940:CDS | 30.0% | |
| ! | AAATTGGATTTGAAATGAGG+GGG | + | chr8_2:45106235-45106254 | None:intergenic | 30.0% |
| TTTCAAAAAAGTGAATTCGG+TGG | - | chr8_2:45106331-45106350 | Msa1249940:CDS | 30.0% | |
| !! | TGTGAACTAAAAGTGTCTTA+GGG | - | chr8_2:45106585-45106604 | Msa1249940:CDS | 30.0% |
| ATGGACAAAAAATTCACACA+GGG | + | chr8_2:45106694-45106713 | None:intergenic | 30.0% | |
| AATGGACAAAAAATTCACAC+AGG | + | chr8_2:45106695-45106714 | None:intergenic | 30.0% | |
| ! | ACAAAGTCTAAGTTTTCATG+TGG | - | chr8_2:45106773-45106792 | Msa1249940:CDS | 30.0% |
| TTTATTTGTACTTGTACCGA+TGG | - | chr8_2:45106857-45106876 | Msa1249940:CDS | 30.0% | |
| ! | GGTTAAAATTGATAGCTTGA+AGG | - | chr8_2:45106923-45106942 | Msa1249940:CDS | 30.0% |
| !! | GTTTCTATTTTTCAGCATCA+TGG | - | chr8_2:45106958-45106977 | Msa1249940:CDS | 30.0% |
| AAAAGCCTCATCATCTTTAT+CGG | + | chr8_2:45107075-45107094 | None:intergenic | 30.0% | |
| TTACATGAAACAGTTCATCA+AGG | + | chr8_2:45107163-45107182 | None:intergenic | 30.0% | |
| GATGAACTGTTTCATGTAAA+CGG | - | chr8_2:45107164-45107183 | Msa1249940:CDS | 30.0% | |
| GGAAAAGTTATTACTGAAGA+TGG | - | chr8_2:45107218-45107237 | Msa1249940:CDS | 30.0% | |
| !!! | AGGTTCCTTTTGTTATTATC+TGG | - | chr8_2:45107437-45107456 | Msa1249940:CDS | 30.0% |
| TACAAAAAGCTGAAGGAAAA+TGG | - | chr8_2:45107608-45107627 | Msa1249940:intron | 30.0% | |
| ACAAAAAGCTGAAGGAAAAT+GGG | - | chr8_2:45107609-45107628 | Msa1249940:intron | 30.0% | |
| GACTCTTCTTCATTATCTAA+GGG | + | chr8_2:45107659-45107678 | None:intergenic | 30.0% | |
| TGACTCTTCTTCATTATCTA+AGG | + | chr8_2:45107660-45107679 | None:intergenic | 30.0% | |
| ATTAAAAAGAGGGAATGATG+GGG | + | chr8_2:45108039-45108058 | None:intergenic | 30.0% | |
| TTTATCTCCATTTCAGATTC+AGG | - | chr8_2:45108106-45108125 | Msa1249940:intron | 30.0% | |
| TGAAGCATACCATAAGATTA+AGG | - | chr8_2:45108214-45108233 | Msa1249940:intron | 30.0% | |
| ! | TGTTTTGTGCCTTAATCTTA+TGG | + | chr8_2:45108226-45108245 | None:intergenic | 30.0% |
| TCCTTTAATGAATTCTTTGC+GGG | - | chr8_2:45108293-45108312 | Msa1249940:intron | 30.0% | |
| GGAGAGAATAAAAGAAATAG+AGG | - | chr8_2:45108490-45108509 | Msa1249940:intron | 30.0% | |
| ! | AAAAGAAATAGAGGCACAAA+AGG | - | chr8_2:45108499-45108518 | Msa1249940:intron | 30.0% |
| AGATATAACAAGCAGATTTC+AGG | + | chr8_2:45108780-45108799 | None:intergenic | 30.0% | |
| AAACAAGAAGAACACAGACT+AGG | + | chr8_2:45105607-45105626 | None:intergenic | 35.0% | |
| ! | ACGTATTCTATCAGAAGTGT+CGG | + | chr8_2:45106017-45106036 | None:intergenic | 35.0% |
| ATACGTGGTAGATTTAGTAG+TGG | - | chr8_2:45106031-45106050 | Msa1249940:CDS | 35.0% | |
| !! | TAAGGCTTTGTTTGAGAGTT+TGG | - | chr8_2:45106100-45106119 | Msa1249940:CDS | 35.0% |
| GTGGAAGAAATAGAAGACAT+TGG | - | chr8_2:45106164-45106183 | Msa1249940:CDS | 35.0% | |
| AAGAAATAGAAGACATTGGG+AGG | - | chr8_2:45106168-45106187 | Msa1249940:CDS | 35.0% | |
| !! | GTGTGAACTAAAAGTGTCTT+AGG | - | chr8_2:45106584-45106603 | Msa1249940:CDS | 35.0% |
| !! | GTGAACTAAAAGTGTCTTAG+GGG | - | chr8_2:45106586-45106605 | Msa1249940:CDS | 35.0% |
| TGGACAAAAAATTCACACAG+GGG | + | chr8_2:45106693-45106712 | None:intergenic | 35.0% | |
| ! | TTAGACTTTGTTTGGGAGTT+TGG | + | chr8_2:45106764-45106783 | None:intergenic | 35.0% |
| ! | GTTTTTCTTACTTGACACTG+TGG | - | chr8_2:45106807-45106826 | Msa1249940:CDS | 35.0% |
| ACCACAACACAATATTCCAT+CGG | + | chr8_2:45106876-45106895 | None:intergenic | 35.0% | |
| !! | TATTTTTCAGCATCATGGTG+TGG | - | chr8_2:45106963-45106982 | Msa1249940:CDS | 35.0% |
| GTGTCTCTGAATCAGAAAAT+GGG | + | chr8_2:45107133-45107152 | None:intergenic | 35.0% | |
| GTTCACATTATCCGTGTTTA+TGG | - | chr8_2:45107242-45107261 | Msa1249940:CDS | 35.0% | |
| ATACCCTTTCACATCAGAAA+GGG | - | chr8_2:45107274-45107293 | Msa1249940:CDS | 35.0% | |
| AGAGTTGAAAGATCAAGAAG+AGG | - | chr8_2:45107301-45107320 | Msa1249940:CDS | 35.0% | |
| CTAGCTTACTTCATTTCCAT+CGG | + | chr8_2:45107393-45107412 | None:intergenic | 35.0% | |
| CATGAAAGGAAAAGTGAGAT+TGG | + | chr8_2:45107479-45107498 | None:intergenic | 35.0% | |
| CAAAAAGCTGAAGGAAAATG+GGG | - | chr8_2:45107610-45107629 | Msa1249940:intron | 35.0% | |
| ! | AAGAATTAGAAAGTGTGCCT+TGG | - | chr8_2:45107687-45107706 | Msa1249940:intron | 35.0% |
| ! | GTATTGAATTAGTTTCGCAC+AGG | + | chr8_2:45107738-45107757 | None:intergenic | 35.0% |
| !! | GAAAACTTTTCAGGAGTGAA+TGG | + | chr8_2:45107866-45107885 | None:intergenic | 35.0% |
| ! | TCGAGTTCAGAAAACTTTTC+AGG | + | chr8_2:45107875-45107894 | None:intergenic | 35.0% |
| TGAACTCGATGAAATAGCAA+AGG | - | chr8_2:45107886-45107905 | Msa1249940:intron | 35.0% | |
| ! | TCAAACACTTGAGTCAGTTT+TGG | - | chr8_2:45107922-45107941 | Msa1249940:intron | 35.0% |
| TTAAAAAGAGGGAATGATGG+GGG | + | chr8_2:45108038-45108057 | None:intergenic | 35.0% | |
| !!! | TGAGTTTTGGAAGAAAAGCA+CGG | + | chr8_2:45108193-45108212 | None:intergenic | 35.0% |
| ! | TGGTATGCTTCAATGAGTTT+TGG | + | chr8_2:45108206-45108225 | None:intergenic | 35.0% |
| AAACATTGATGCACTTGAAG+TGG | - | chr8_2:45108241-45108260 | Msa1249940:intron | 35.0% | |
| TCCCGCAAAGAATTCATTAA+AGG | + | chr8_2:45108297-45108316 | None:intergenic | 35.0% | |
| ! | TCTTTTCTTGTGTCACCAAA+GGG | + | chr8_2:45108338-45108357 | None:intergenic | 35.0% |
| ! | TTCTTTTCTTGTGTCACCAA+AGG | + | chr8_2:45108339-45108358 | None:intergenic | 35.0% |
| ATTCTTGAGTCGCAAATTCA+AGG | - | chr8_2:45108358-45108377 | Msa1249940:intron | 35.0% | |
| TTTATTCTCTCCTCAGTGAA+AGG | + | chr8_2:45108482-45108501 | None:intergenic | 35.0% | |
| ACAAAAGGATGACATTGCAA+AGG | - | chr8_2:45108514-45108533 | Msa1249940:intron | 35.0% | |
| CAAAAGGATGACATTGCAAA+GGG | - | chr8_2:45108515-45108534 | Msa1249940:intron | 35.0% | |
| AAAAGGATGACATTGCAAAG+GGG | - | chr8_2:45108516-45108535 | Msa1249940:intron | 35.0% | |
| AGTCATCAGGCCAAAAATTA+TGG | - | chr8_2:45108935-45108954 | Msa1249940:five_prime_UTR | 35.0% | |
| ATTTATAGGAGTGGAAAGCG+TGG | + | chr8_2:45105568-45105587 | None:intergenic | 40.0% | |
| !! | GGACGTCTTATTTATAGGAG+TGG | + | chr8_2:45105577-45105596 | None:intergenic | 40.0% |
| CGAAGAAGAAAGTCTCTATC+AGG | + | chr8_2:45105715-45105734 | None:intergenic | 40.0% | |
| ! | GAAGAGAAGTAACGGAGTTA+CGG | + | chr8_2:45105770-45105789 | None:intergenic | 40.0% |
| GACACTTCTGATAGAATACG+TGG | - | chr8_2:45106016-45106035 | Msa1249940:CDS | 40.0% | |
| ACATTGACCAGAGTTGACTA+AGG | - | chr8_2:45106082-45106101 | Msa1249940:CDS | 40.0% | |
| AACAAAGCCTTAGTCAACTC+TGG | + | chr8_2:45106092-45106111 | None:intergenic | 40.0% | |
| !! | GCTTTGTTTGAGAGTTTGGA+GGG | - | chr8_2:45106104-45106123 | Msa1249940:CDS | 40.0% |
| ! | CTTTGTTTGAGAGTTTGGAG+GGG | - | chr8_2:45106105-45106124 | Msa1249940:CDS | 40.0% |
| !! | GGAGGATTTTGGAAAAAGGA+AGG | - | chr8_2:45106136-45106155 | Msa1249940:CDS | 40.0% |
| TGGAAAAAGGAAGGAACAAG+TGG | - | chr8_2:45106145-45106164 | Msa1249940:CDS | 40.0% | |
| ! | CAAAAAAGTGAATTCGGTGG+CGG | - | chr8_2:45106334-45106353 | Msa1249940:CDS | 40.0% |
| CGGATCTTGCCGAAAATATT+GGG | - | chr8_2:45106354-45106373 | Msa1249940:CDS | 40.0% | |
| GGATCTTGCCGAAAATATTG+GGG | - | chr8_2:45106355-45106374 | Msa1249940:CDS | 40.0% | |
| GATCTTGCCGAAAATATTGG+GGG | - | chr8_2:45106356-45106375 | Msa1249940:CDS | 40.0% | |
| ATCTTGCCGAAAATATTGGG+GGG | - | chr8_2:45106357-45106376 | Msa1249940:CDS | 40.0% | |
| !! | GAATCGCGTTTTGATACATG+AGG | - | chr8_2:45106516-45106535 | Msa1249940:CDS | 40.0% |
| TTTGATACATGAGGATGGAG+AGG | - | chr8_2:45106525-45106544 | Msa1249940:CDS | 40.0% | |
| ! | TTTTGTCTGAGTCTCTCTCT+CGG | + | chr8_2:45106561-45106580 | None:intergenic | 40.0% |
| !! | AAAATTATTAGGGGGTGCCA+CGG | - | chr8_2:45106641-45106660 | Msa1249940:CDS | 40.0% |
| ACAAAAAATTCACACAGGGG+CGG | + | chr8_2:45106690-45106709 | None:intergenic | 40.0% | |
| ! | ACTTTGTTTGGGAGTTTGGA+GGG | + | chr8_2:45106760-45106779 | None:intergenic | 40.0% |
| ACCGATGGAATATTGTGTTG+TGG | - | chr8_2:45106872-45106891 | Msa1249940:CDS | 40.0% | |
| AGCTTGAAGGGAAAGAAACT+TGG | - | chr8_2:45106936-45106955 | Msa1249940:CDS | 40.0% | |
| TACGATGAACTCTCTCCAAA+CGG | - | chr8_2:45107023-45107042 | Msa1249940:intron | 40.0% | |
| CGTGTCTCTGAATCAGAAAA+TGG | + | chr8_2:45107134-45107153 | None:intergenic | 40.0% | |
| TCATCAAGCAATGCAAGATG+AGG | + | chr8_2:45107194-45107213 | None:intergenic | 40.0% | |
| ATCCTTCAGCTCCATAAACA+CGG | + | chr8_2:45107256-45107275 | None:intergenic | 40.0% | |
| GATACCCTTTCACATCAGAA+AGG | - | chr8_2:45107273-45107292 | Msa1249940:CDS | 40.0% | |
| GAACCCTTTCTGATGTGAAA+GGG | + | chr8_2:45107280-45107299 | None:intergenic | 40.0% | |
| TGAACCCTTTCTGATGTGAA+AGG | + | chr8_2:45107281-45107300 | None:intergenic | 40.0% | |
| ATCAAGAAGAGGAAGCTAAG+AGG | - | chr8_2:45107312-45107331 | Msa1249940:CDS | 40.0% | |
| GGATGATATCACAAAGTCAC+GGG | + | chr8_2:45107372-45107391 | None:intergenic | 40.0% | |
| CGGATGATATCACAAAGTCA+CGG | + | chr8_2:45107373-45107392 | None:intergenic | 40.0% | |
| GACTTTGTGATATCATCCGA+TGG | - | chr8_2:45107374-45107393 | Msa1249940:CDS | 40.0% | |
| GTATCTGTTGTGCACATGAA+AGG | + | chr8_2:45107493-45107512 | None:intergenic | 40.0% | |
| ATACCTATCTCTGAGCTTGA+GGG | - | chr8_2:45107509-45107528 | Msa1249940:CDS | 40.0% | |
| GGAGGTTTACAAAAAGCTGA+AGG | - | chr8_2:45107601-45107620 | Msa1249940:intron | 40.0% | |
| ! | TCCCTACCTTGGTTGTTATT+GGG | - | chr8_2:45107774-45107793 | Msa1249940:intron | 40.0% |
| CATTGACAAAGATGCGAAGA+AGG | - | chr8_2:45107967-45107986 | Msa1249940:intron | 40.0% | |
| TCTGACACCTGAATCTGAAA+TGG | + | chr8_2:45108116-45108135 | None:intergenic | 40.0% | |
| ATTCAGGTGTCAGAGTTAGA+GGG | - | chr8_2:45108122-45108141 | Msa1249940:intron | 40.0% | |
| ! | TGGTTTTCATCTCAAGTGAC+AGG | - | chr8_2:45108261-45108280 | Msa1249940:intron | 40.0% |
| ! | GGTTTTCATCTCAAGTGACA+GGG | - | chr8_2:45108262-45108281 | Msa1249940:intron | 40.0% |
| ! | AGTCGCAAATTCAAGGTATC+TGG | - | chr8_2:45108365-45108384 | Msa1249940:intron | 40.0% |
| AGATGCTTATCCTTTCACTG+AGG | - | chr8_2:45108469-45108488 | Msa1249940:intron | 40.0% | |
| ! | GGAGACAAAGGAAGCATAAA+TGG | - | chr8_2:45108692-45108711 | Msa1249940:intron | 40.0% |
| TCACAAACCCATCCATCTTT+GGG | + | chr8_2:45108737-45108756 | None:intergenic | 40.0% | |
| ATCACAAACCCATCCATCTT+TGG | + | chr8_2:45108738-45108757 | None:intergenic | 40.0% | |
| ! | AAAGATGGATGGGTTTGTGA+TGG | - | chr8_2:45108737-45108756 | Msa1249940:intron | 40.0% |
| AACAAGCAGATTTCAGGCTT+TGG | + | chr8_2:45108774-45108793 | None:intergenic | 40.0% | |
| AATCTTGTGCATGAGTCATC+AGG | - | chr8_2:45108922-45108941 | Msa1249940:five_prime_UTR | 40.0% | |
| GACTTTCTTCTTCGCAACAC+CGG | - | chr8_2:45105721-45105740 | Msa1249940:CDS | 45.0% | |
| !! | GGCTTTGTTTGAGAGTTTGG+AGG | - | chr8_2:45106103-45106122 | Msa1249940:CDS | 45.0% |
| !! | GAGGGGAGGATTTTGGAAAA+AGG | - | chr8_2:45106132-45106151 | Msa1249940:CDS | 45.0% |
| ATAGAAGACATTGGGAGGAG+AGG | - | chr8_2:45106173-45106192 | Msa1249940:CDS | 45.0% | |
| TAGAAGACATTGGGAGGAGA+GGG | - | chr8_2:45106174-45106193 | Msa1249940:CDS | 45.0% | |
| GCGGATCTTGCCGAAAATAT+TGG | - | chr8_2:45106353-45106372 | Msa1249940:CDS | 45.0% | |
| GTCTCGTGTTTGAGCTATTG+TGG | + | chr8_2:45106457-45106476 | None:intergenic | 45.0% | |
| GCGATTCTCACTTCTCATGT+TGG | + | chr8_2:45106503-45106522 | None:intergenic | 45.0% | |
| !! | CGCGTTTTGATACATGAGGA+TGG | - | chr8_2:45106520-45106539 | Msa1249940:CDS | 45.0% |
| ! | CTTTGTTTGGGAGTTTGGAG+GGG | + | chr8_2:45106759-45106778 | None:intergenic | 45.0% |
| ! | GACTTTGTTTGGGAGTTTGG+AGG | + | chr8_2:45106761-45106780 | None:intergenic | 45.0% |
| ACAACCTCAAAGTCACCGTT+TGG | + | chr8_2:45107041-45107060 | None:intergenic | 45.0% | |
| CTCAGCCGATAAAGATGATG+AGG | - | chr8_2:45107067-45107086 | Msa1249940:intron | 45.0% | |
| !!! | GCTACTTTTCCAAGATGCCA+TGG | - | chr8_2:45107099-45107118 | Msa1249940:CDS | 45.0% |
| CTTGCATTGCTTGATGAAGC+TGG | - | chr8_2:45107197-45107216 | Msa1249940:CDS | 45.0% | |
| ATCCGTGTTTATGGAGCTGA+AGG | - | chr8_2:45107251-45107270 | Msa1249940:CDS | 45.0% | |
| GATACCTATCTCTGAGCTTG+AGG | - | chr8_2:45107508-45107527 | Msa1249940:CDS | 45.0% | |
| TTTCCCTCAAGCTCAGAGAT+AGG | + | chr8_2:45107515-45107534 | None:intergenic | 45.0% | |
| TTGAGAGGCAAGGATAACCA+AGG | + | chr8_2:45107707-45107726 | None:intergenic | 45.0% | |
| TTGGTTATCCTTGCCTCTCA+AGG | - | chr8_2:45107706-45107725 | Msa1249940:intron | 45.0% | |
| CTCCCTACCTTGGTTGTTAT+TGG | - | chr8_2:45107773-45107792 | Msa1249940:intron | 45.0% | |
| GCCCAATAACAACCAAGGTA+GGG | + | chr8_2:45107778-45107797 | None:intergenic | 45.0% | |
| ATCTGGCCCAATAACAACCA+AGG | + | chr8_2:45107783-45107802 | None:intergenic | 45.0% | |
| ! | TTGGTTGTTATTGGGCCAGA+TGG | - | chr8_2:45107782-45107801 | Msa1249940:intron | 45.0% |
| ! | TGGTTGTTATTGGGCCAGAT+GGG | - | chr8_2:45107783-45107802 | Msa1249940:intron | 45.0% |
| ! | GGATGTAGAGTTTTCCCATC+TGG | + | chr8_2:45107800-45107819 | None:intergenic | 45.0% |
| ATCAACCCCATGATCCTCAA+TGG | + | chr8_2:45107837-45107856 | None:intergenic | 45.0% | |
| CGATGAAATAGCAAAGGCCA+AGG | - | chr8_2:45107892-45107911 | Msa1249940:intron | 45.0% | |
| TGAAATAGCAAAGGCCAAGG+AGG | - | chr8_2:45107895-45107914 | Msa1249940:intron | 45.0% | |
| ! | AAGTGTTTGAGATGCCTCCT+TGG | + | chr8_2:45107912-45107931 | None:intergenic | 45.0% |
| !!! | CTTGAGTCAGTTTTGGTGTC+TGG | - | chr8_2:45107929-45107948 | Msa1249940:intron | 45.0% |
| GATTCAGGTGTCAGAGTTAG+AGG | - | chr8_2:45108121-45108140 | Msa1249940:intron | 45.0% | |
| TTCAGGTGTCAGAGTTAGAG+GGG | - | chr8_2:45108123-45108142 | Msa1249940:intron | 45.0% | |
| ! | TTGGAAGAAAAGCACGGCAT+GGG | + | chr8_2:45108187-45108206 | None:intergenic | 45.0% |
| ! | TTTGGAAGAAAAGCACGGCA+TGG | + | chr8_2:45108188-45108207 | None:intergenic | 45.0% |
| AATTCTTTGCGGGAATGCCA+TGG | - | chr8_2:45108303-45108322 | Msa1249940:intron | 45.0% | |
| CGCAATGTTTATTGCTGCGA+TGG | - | chr8_2:45108593-45108612 | Msa1249940:intron | 45.0% | |
| TTATTGCTGCGATGGTTGTG+AGG | - | chr8_2:45108601-45108620 | Msa1249940:intron | 45.0% | |
| GTGAGGATGAGGGAGATAAT+TGG | - | chr8_2:45108618-45108637 | Msa1249940:intron | 45.0% | |
| ! | AGGAAGCATAAATGGTGCCA+AGG | - | chr8_2:45108700-45108719 | Msa1249940:intron | 45.0% |
| TTTGGGCTTCTCTTCTTCCT+TGG | + | chr8_2:45108720-45108739 | None:intergenic | 45.0% | |
| GAAGAAGAGAAGCCCAAAGA+TGG | - | chr8_2:45108722-45108741 | Msa1249940:intron | 45.0% | |
| AAGAGAAGCCCAAAGATGGA+TGG | - | chr8_2:45108726-45108745 | Msa1249940:intron | 45.0% | |
| AGAGAAGCCCAAAGATGGAT+GGG | - | chr8_2:45108727-45108746 | Msa1249940:intron | 45.0% | |
| !! | AATATAATAACAATATAAAT+TGG | + | chr8_2:45106251-45106270 | None:intergenic | 5.0% |
| !! | ACAAAAAAAAAAAAATTATT+AGG | - | chr8_2:45106630-45106649 | Msa1249940:CDS | 5.0% |
| !! | CAAAAAAAAAAAAATTATTA+GGG | - | chr8_2:45106631-45106650 | Msa1249940:CDS | 5.0% |
| !! | AAAAAAAAAAAAATTATTAG+GGG | - | chr8_2:45106632-45106651 | Msa1249940:CDS | 5.0% |
| !!! | TATTAATAACAATTTTTTTT+TGG | + | chr8_2:45108078-45108097 | None:intergenic | 5.0% |
| ! | TATAGGAGTGGAAAGCGTGG+AGG | + | chr8_2:45105565-45105584 | None:intergenic | 50.0% |
| GAACACAGACTAGGCGAACA+AGG | + | chr8_2:45105598-45105617 | None:intergenic | 50.0% | |
| CACTCACTCTCCACGAACAA+TGG | - | chr8_2:45105639-45105658 | Msa1249940:three_prime_UTR | 50.0% | |
| TCACTCTCCACGAACAATGG+CGG | - | chr8_2:45105642-45105661 | Msa1249940:three_prime_UTR | 50.0% | |
| ACAGAATCCGCCATTGTTCG+TGG | + | chr8_2:45105652-45105671 | None:intergenic | 50.0% | |
| CAGTTGTAGTACCTGATCGC+CGG | + | chr8_2:45105743-45105762 | None:intergenic | 50.0% | |
| ! | GAGAAGTAACGGAGTTACGG+TGG | + | chr8_2:45105767-45105786 | None:intergenic | 50.0% |
| TGTTTGAGAGTTTGGAGGGG+AGG | - | chr8_2:45106108-45106127 | Msa1249940:CDS | 50.0% | |
| GTTTGAGAGTTTGGAGGGGA+GGG | - | chr8_2:45106109-45106128 | Msa1249940:CDS | 50.0% | |
| TTTGAGAGTTTGGAGGGGAG+GGG | - | chr8_2:45106110-45106129 | Msa1249940:CDS | 50.0% | |
| ! | ACCGCACCCCCCAATATTTT+CGG | + | chr8_2:45106366-45106385 | None:intergenic | 50.0% |
| TACATGAGGATGGAGAGGAG+AGG | - | chr8_2:45106530-45106549 | Msa1249940:CDS | 50.0% | |
| ACATGAGGATGGAGAGGAGA+GGG | - | chr8_2:45106531-45106550 | Msa1249940:CDS | 50.0% | |
| TTTGGGAGTTTGGAGGGGAA+GGG | + | chr8_2:45106754-45106773 | None:intergenic | 50.0% | |
| GTTGGAGTGAATCCTCGACA+CGG | + | chr8_2:45106990-45107009 | None:intergenic | 50.0% | |
| TCGAGGATTCACTCCAACGT+TGG | - | chr8_2:45106992-45107011 | Msa1249940:intron | 50.0% | |
| AGGATTCACTCCAACGTTGG+TGG | - | chr8_2:45106995-45107014 | Msa1249940:intron | 50.0% | |
| ! | ATTCACTCCAACGTTGGTGG+AGG | - | chr8_2:45106998-45107017 | Msa1249940:intron | 50.0% |
| CTCTCCAAACGGTGACTTTG+AGG | - | chr8_2:45107034-45107053 | Msa1249940:intron | 50.0% | |
| ! | CTTTTCCAAGATGCCATGGC+TGG | - | chr8_2:45107103-45107122 | Msa1249940:CDS | 50.0% |
| GAAAATGGGATAGCCAGCCA+TGG | + | chr8_2:45107119-45107138 | None:intergenic | 50.0% | |
| GAGGAACCAGTCCTTGAGAT+CGG | - | chr8_2:45107331-45107350 | Msa1249940:CDS | 50.0% | |
| CCAATACCGATCTCAAGGAC+TGG | + | chr8_2:45107340-45107359 | None:intergenic | 50.0% | |
| CCAGTCCTTGAGATCGGTAT+TGG | - | chr8_2:45107337-45107356 | Msa1249940:CDS | 50.0% | |
| AGAGGCCAATACCGATCTCA+AGG | + | chr8_2:45107345-45107364 | None:intergenic | 50.0% | |
| GAGCTTGAGGGAAAGACAGT+TGG | - | chr8_2:45107521-45107540 | Msa1249940:CDS | 50.0% | |
| !! | GGTTTTGTCCTTGAGAGGCA+AGG | + | chr8_2:45107717-45107736 | None:intergenic | 50.0% |
| !! | GCACAGGTTTTGTCCTTGAG+AGG | + | chr8_2:45107722-45107741 | None:intergenic | 50.0% |
| GCTATCAGATCTCCCTACCT+TGG | - | chr8_2:45107763-45107782 | Msa1249940:intron | 50.0% | |
| GGCCCAATAACAACCAAGGT+AGG | + | chr8_2:45107779-45107798 | None:intergenic | 50.0% | |
| TCTACATCCTAATGCCGCTG+AGG | - | chr8_2:45107811-45107830 | Msa1249940:intron | 50.0% | |
| ATGATCCTCAATGGCCTCAG+CGG | + | chr8_2:45107828-45107847 | None:intergenic | 50.0% | |
| CTGAGGCCATTGAGGATCAT+GGG | - | chr8_2:45107828-45107847 | Msa1249940:intron | 50.0% | |
| TGAGGCCATTGAGGATCATG+GGG | - | chr8_2:45107829-45107848 | Msa1249940:intron | 50.0% | |
| ! | TGGAAGAAAAGCACGGCATG+GGG | + | chr8_2:45108186-45108205 | None:intergenic | 50.0% |
| GAGCTTCTTTCGTGACAGTC+TGG | + | chr8_2:45108424-45108443 | None:intergenic | 50.0% | |
| ACTGTCACGAAAGAAGCTCG+AGG | - | chr8_2:45108425-45108444 | Msa1249940:intron | 50.0% | |
| AAAGAAGCTCGAGGTCTGGT+TGG | - | chr8_2:45108434-45108453 | Msa1249940:intron | 50.0% | |
| AAGAAGCTCGAGGTCTGGTT+GGG | - | chr8_2:45108435-45108454 | Msa1249940:intron | 50.0% | |
| ! | GAGGTCTGGTTGGGCTTTAT+GGG | - | chr8_2:45108444-45108463 | Msa1249940:intron | 50.0% |
| ! | AGGTCTGGTTGGGCTTTATG+GGG | - | chr8_2:45108445-45108464 | Msa1249940:intron | 50.0% |
| AGGATGACATTGCAAAGGGG+TGG | - | chr8_2:45108519-45108538 | Msa1249940:intron | 50.0% | |
| GTTTCATGCGTCACCTTCTC+AGG | + | chr8_2:45108545-45108564 | None:intergenic | 50.0% | |
| TGCGATGGTTGTGAGGATGA+GGG | - | chr8_2:45108608-45108627 | Msa1249940:intron | 50.0% | |
| TCTCCATCCAAATTGTGCGC+TGG | - | chr8_2:45108670-45108689 | Msa1249940:intron | 50.0% | |
| CTCCATCCAAATTGTGCGCT+GGG | - | chr8_2:45108671-45108690 | Msa1249940:intron | 50.0% | |
| TTGTCTCCCAGCGCACAATT+TGG | + | chr8_2:45108680-45108699 | None:intergenic | 50.0% | |
| AATTGTGCGCTGGGAGACAA+AGG | - | chr8_2:45108680-45108699 | Msa1249940:intron | 50.0% | |
| ACATTGGGAGGAGAGGGCTT+TGG | - | chr8_2:45106180-45106199 | Msa1249940:CDS | 55.0% | |
| GCCGAAAATATTGGGGGGTG+CGG | - | chr8_2:45106362-45106381 | Msa1249940:intron | 55.0% | |
| CATGAGGATGGAGAGGAGAG+GGG | - | chr8_2:45106532-45106551 | Msa1249940:CDS | 55.0% | |
| ATGAGGATGGAGAGGAGAGG+GGG | - | chr8_2:45106533-45106552 | Msa1249940:CDS | 55.0% | |
| GGATCTCTATTGAGACCCCC+AGG | + | chr8_2:45106669-45106688 | None:intergenic | 55.0% | |
| GTTTGGGAGTTTGGAGGGGA+AGG | + | chr8_2:45106755-45106774 | None:intergenic | 55.0% | |
| TCGTAGACCTCCACCAACGT+TGG | + | chr8_2:45107008-45107027 | None:intergenic | 55.0% | |
| GATAGCCAGCCATGGCATCT+TGG | + | chr8_2:45107111-45107130 | None:intergenic | 55.0% | |
| CACAAAGTCACGGGAACGAG+AGG | + | chr8_2:45107363-45107382 | None:intergenic | 55.0% | |
| TCAATGGCCTCAGCGGCATT+AGG | + | chr8_2:45107821-45107840 | None:intergenic | 55.0% | |
| TAATGCCGCTGAGGCCATTG+AGG | - | chr8_2:45107820-45107839 | Msa1249940:intron | 55.0% | |
| GCTGAGGCCATTGAGGATCA+TGG | - | chr8_2:45107827-45107846 | Msa1249940:intron | 55.0% | |
| !! | AGTGGGCTGAGAAGTAGAGG+AGG | + | chr8_2:45108157-45108176 | None:intergenic | 55.0% |
| TCCTCTACTTCTCAGCCCAC+TGG | - | chr8_2:45108156-45108175 | Msa1249940:intron | 55.0% | |
| !! | ACCAGTGGGCTGAGAAGTAG+AGG | + | chr8_2:45108160-45108179 | None:intergenic | 55.0% |
| ! | GGAAGAAAAGCACGGCATGG+GGG | + | chr8_2:45108185-45108204 | None:intergenic | 55.0% |
| ATCCCCAAGCTCGTGGCAAT+TGG | - | chr8_2:45108389-45108408 | Msa1249940:intron | 55.0% | |
| TCCCCAAGCTCGTGGCAATT+GGG | - | chr8_2:45108390-45108409 | Msa1249940:intron | 55.0% | |
| TTCGTGACAGTCTGGCCACT+TGG | + | chr8_2:45108416-45108435 | None:intergenic | 55.0% | |
| CACGAAAGAAGCTCGAGGTC+TGG | - | chr8_2:45108430-45108449 | Msa1249940:intron | 55.0% | |
| CGAGGTCTGGTTGGGCTTTA+TGG | - | chr8_2:45108443-45108462 | Msa1249940:intron | 55.0% | |
| CTGCGATGGTTGTGAGGATG+AGG | - | chr8_2:45108607-45108626 | Msa1249940:intron | 55.0% | |
| CTCCCAGCGCACAATTTGGA+TGG | + | chr8_2:45108676-45108695 | None:intergenic | 55.0% | |
| TCTTCGCAACACCGGCGATC+AGG | - | chr8_2:45105729-45105748 | Msa1249940:CDS | 60.0% | |
| AGAGTTTGGAGGGGAGGGGA+GGG | - | chr8_2:45106114-45106133 | Msa1249940:CDS | 60.0% | |
| ! | TTGGGAGGAGAGGGCTTTGG+AGG | - | chr8_2:45106183-45106202 | Msa1249940:CDS | 60.0% |
| GAGTTTGGAGGGGAAGGGAG+GGG | + | chr8_2:45106749-45106768 | None:intergenic | 60.0% | |
| GGAGTTTGGAGGGGAAGGGA+GGG | + | chr8_2:45106750-45106769 | None:intergenic | 60.0% | |
| TCATGGTGTGGTCCGTGTCG+AGG | - | chr8_2:45106975-45106994 | Msa1249940:intron | 60.0% | |
| CTTTGCGGGAATGCCATGGC+TGG | - | chr8_2:45108307-45108326 | Msa1249940:intron | 60.0% | |
| !! | CCAAAGGGAAGTGCCAGCCA+TGG | + | chr8_2:45108323-45108342 | None:intergenic | 60.0% |
| CCATGGCTGGCACTTCCCTT+TGG | - | chr8_2:45108320-45108339 | Msa1249940:intron | 60.0% | |
| ATCTGGCATCCCCAAGCTCG+TGG | - | chr8_2:45108382-45108401 | Msa1249940:intron | 60.0% | |
| GCCCAATTGCCACGAGCTTG+GGG | + | chr8_2:45108394-45108413 | None:intergenic | 60.0% | |
| GGCCCAATTGCCACGAGCTT+GGG | + | chr8_2:45108395-45108414 | None:intergenic | 60.0% | |
| TGGCCCAATTGCCACGAGCT+TGG | + | chr8_2:45108396-45108415 | None:intergenic | 60.0% | |
| CTCGTGGCAATTGGGCCAAG+TGG | - | chr8_2:45108398-45108417 | Msa1249940:intron | 60.0% | |
| TGCAAAGGGGTGGCCTGAGA+AGG | - | chr8_2:45108529-45108548 | Msa1249940:intron | 60.0% | |
| GAGAGTTTGGAGGGGAGGGG+AGG | - | chr8_2:45106113-45106132 | Msa1249940:CDS | 65.0% | |
| GAGTTTGGAGGGGAGGGGAG+GGG | - | chr8_2:45106115-45106134 | Msa1249940:CDS | 65.0% | |
| ! | GGGAGGGGAGGGGAGGATTT+TGG | - | chr8_2:45106125-45106144 | Msa1249940:CDS | 65.0% |
| ! | ATTGAGACCCCCAGGTGCCG+TGG | + | chr8_2:45106661-45106680 | None:intergenic | 65.0% |
| ! | AAGGGAGGGGAGGGCTTTGG+GGG | + | chr8_2:45106736-45106755 | None:intergenic | 65.0% |
| GAAGGGAGGGGAGGGCTTTG+GGG | + | chr8_2:45106737-45106756 | None:intergenic | 65.0% | |
| GGAAGGGAGGGGAGGGCTTT+GGG | + | chr8_2:45106738-45106757 | None:intergenic | 65.0% | |
| TTGGAGGGGAAGGGAGGGGA+GGG | + | chr8_2:45106745-45106764 | None:intergenic | 65.0% | |
| TTTGGAGGGGAAGGGAGGGG+AGG | + | chr8_2:45106746-45106765 | None:intergenic | 65.0% | |
| GGGAGTTTGGAGGGGAAGGG+AGG | + | chr8_2:45106751-45106770 | None:intergenic | 65.0% | |
| ACGGCATGGGGGACACCAGT+GGG | + | chr8_2:45108174-45108193 | None:intergenic | 65.0% | |
| TTTGGAGGGGAGGGGAGGGG+AGG | - | chr8_2:45106118-45106137 | Msa1249940:CDS | 70.0% | |
| !! | TTAGGGGGTGCCACGGCACC+TGG | - | chr8_2:45106648-45106667 | Msa1249940:CDS | 70.0% |
| !! | TAGGGGGTGCCACGGCACCT+GGG | - | chr8_2:45106649-45106668 | Msa1249940:CDS | 70.0% |
| !! | AGGGGAGGGCTTTGGGGGGT+TGG | + | chr8_2:45106731-45106750 | None:intergenic | 70.0% |
| !! | AGGGAGGGGAGGGCTTTGGG+GGG | + | chr8_2:45106735-45106754 | None:intergenic | 70.0% |
| GGGAAGGGAGGGGAGGGCTT+TGG | + | chr8_2:45106739-45106758 | None:intergenic | 70.0% | |
| CACGGCATGGGGGACACCAG+TGG | + | chr8_2:45108175-45108194 | None:intergenic | 70.0% | |
| !! | AGGGGGTGCCACGGCACCTG+GGG | - | chr8_2:45106650-45106669 | Msa1249940:CDS | 75.0% |
| !!! | GGGGGTGCCACGGCACCTGG+GGG | - | chr8_2:45106651-45106670 | Msa1249940:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_2 | gene | 45105527 | 45108972 | 45105527 | ID=Msa1249940;Name=Msa1249940 |
| chr8_2 | mRNA | 45105527 | 45108972 | 45105527 | ID=Msa1249940-mRNA-1;Parent=Msa1249940;Name=Msa1249940-mRNA-1;_AED=0.29;_eAED=0.29;_QI=131|1|1|1|0.75|0.6|5|165|570 |
| chr8_2 | exon | 45105527 | 45105581 | 45105527 | ID=Msa1249940-mRNA-1:exon:13678;Parent=Msa1249940-mRNA-1 |
| chr8_2 | exon | 45105608 | 45106377 | 45105608 | ID=Msa1249940-mRNA-1:exon:13677;Parent=Msa1249940-mRNA-1 |
| chr8_2 | exon | 45106511 | 45106990 | 45106511 | ID=Msa1249940-mRNA-1:exon:13676;Parent=Msa1249940-mRNA-1 |
| chr8_2 | exon | 45107096 | 45107575 | 45107096 | ID=Msa1249940-mRNA-1:exon:13675;Parent=Msa1249940-mRNA-1 |
| chr8_2 | exon | 45108749 | 45108972 | 45108749 | ID=Msa1249940-mRNA-1:exon:13674;Parent=Msa1249940-mRNA-1 |
| chr8_2 | five_prime_UTR | 45108842 | 45108972 | 45108842 | ID=Msa1249940-mRNA-1:five_prime_utr;Parent=Msa1249940-mRNA-1 |
| chr8_2 | CDS | 45108749 | 45108841 | 45108749 | ID=Msa1249940-mRNA-1:cds;Parent=Msa1249940-mRNA-1 |
| chr8_2 | CDS | 45107096 | 45107575 | 45107096 | ID=Msa1249940-mRNA-1:cds;Parent=Msa1249940-mRNA-1 |
| chr8_2 | CDS | 45106511 | 45106990 | 45106511 | ID=Msa1249940-mRNA-1:cds;Parent=Msa1249940-mRNA-1 |
| chr8_2 | CDS | 45105718 | 45106377 | 45105718 | ID=Msa1249940-mRNA-1:cds;Parent=Msa1249940-mRNA-1 |
| chr8_2 | three_prime_UTR | 45105608 | 45105717 | 45105608 | ID=Msa1249940-mRNA-1:three_prime_utr;Parent=Msa1249940-mRNA-1 |
| chr8_2 | three_prime_UTR | 45105527 | 45105581 | 45105527 | ID=Msa1249940-mRNA-1:three_prime_utr;Parent=Msa1249940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
