Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243940 | XP_013463392.1 | 95.660 | 576 | 25 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1141 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243940 | A0A072VH05 | 95.660 | 576 | 25 | 0 | 1 | 576 | 1 | 576 | 0.0 | 1141 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0041000 | Msa0243940 | 0.848135 | 7.432887e-60 | -8.615850e-47 |
| Msa0043380 | Msa0243940 | 0.807453 | 5.018355e-50 | -8.615850e-47 |
| Msa0077390 | Msa0243940 | 0.802831 | 4.654748e-49 | -8.615850e-47 |
| Msa0088550 | Msa0243940 | 0.854966 | 8.651280e-62 | -8.615850e-47 |
| Msa0093440 | Msa0243940 | 0.826410 | 2.754758e-54 | -8.615850e-47 |
| Msa0101840 | Msa0243940 | 0.801340 | 9.428612e-49 | -8.615850e-47 |
| Msa0135360 | Msa0243940 | 0.853089 | 3.009522e-61 | -8.615850e-47 |
| Msa0135590 | Msa0243940 | 0.855139 | 7.707859e-62 | -8.615850e-47 |
| Msa0135630 | Msa0243940 | 0.810641 | 1.042057e-50 | -8.615850e-47 |
| Msa0141230 | Msa0243940 | 0.800615 | 1.326100e-48 | -8.615850e-47 |
| Msa0153440 | Msa0243940 | 0.834132 | 3.575829e-56 | -8.615850e-47 |
| Msa0179860 | Msa0243940 | 0.850229 | 1.943286e-60 | -8.615850e-47 |
| Msa0180290 | Msa0243940 | 0.807311 | 5.378664e-50 | -8.615850e-47 |
| Msa0190640 | Msa0243940 | 0.820519 | 6.572767e-53 | -8.615850e-47 |
| Msa0201330 | Msa0243940 | 0.872779 | 2.445488e-67 | -8.615850e-47 |
| Msa0201370 | Msa0243940 | 0.890221 | 1.198096e-73 | -8.615850e-47 |
| Msa0201390 | Msa0243940 | 0.951049 | 4.627521e-109 | -8.615850e-47 |
| Msa0203070 | Msa0243940 | 0.810286 | 1.242932e-50 | -8.615850e-47 |
| Msa0211670 | Msa0243940 | 0.809919 | 1.491406e-50 | -8.615850e-47 |
| Msa0232910 | Msa0243940 | 0.801254 | 9.822203e-49 | -8.615850e-47 |
| Msa0243910 | Msa0243940 | 0.864146 | 1.500284e-64 | -8.615850e-47 |
| Msa0243930 | Msa0243940 | 0.881552 | 2.183314e-70 | -8.615850e-47 |
| Msa0243940 | Msa0254190 | 0.810981 | 8.793886e-51 | -8.615850e-47 |
| Msa0243940 | Msa0256270 | 0.841344 | 5.029289e-58 | -8.615850e-47 |
| Msa0243940 | Msa0282590 | 0.852991 | 3.209690e-61 | -8.615850e-47 |
| Msa0243940 | Msa0282600 | 0.888032 | 8.455037e-73 | -8.615850e-47 |
| Msa0243940 | Msa0331430 | 0.800355 | 1.498180e-48 | -8.615850e-47 |
| Msa0243940 | Msa0362740 | 0.804935 | 1.701236e-49 | -8.615850e-47 |
| Msa0243940 | Msa0389050 | 0.800688 | 1.281701e-48 | -8.615850e-47 |
| Msa0243940 | Msa0405250 | -0.818777 | 1.642143e-52 | -8.615850e-47 |
| Msa0243940 | Msa0418960 | 0.805459 | 1.321373e-49 | -8.615850e-47 |
| Msa0243940 | Msa0437330 | 0.809985 | 1.443531e-50 | -8.615850e-47 |
| Msa0243940 | Msa0439700 | 0.809250 | 2.076738e-50 | -8.615850e-47 |
| Msa0243940 | Msa0457370 | 0.818018 | 2.439702e-52 | -8.615850e-47 |
| Msa0243940 | Msa0586430 | 0.828016 | 1.136377e-54 | -8.615850e-47 |
| Msa0243940 | Msa0589610 | 0.809928 | 1.484856e-50 | -8.615850e-47 |
| Msa0243940 | Msa0589660 | 0.800406 | 1.463016e-48 | -8.615850e-47 |
| Msa0243940 | Msa0607180 | 0.811392 | 7.165045e-51 | -8.615850e-47 |
| Msa0243940 | Msa0618430 | 0.804284 | 2.326099e-49 | -8.615850e-47 |
| Msa0243940 | Msa0626470 | 0.828564 | 8.384070e-55 | -8.615850e-47 |
| Msa0243940 | Msa0629890 | 0.809639 | 1.713224e-50 | -8.615850e-47 |
| Msa0243940 | Msa0641020 | 0.816838 | 4.499300e-52 | -8.615850e-47 |
| Msa0243940 | Msa0645460 | 0.804605 | 1.993439e-49 | -8.615850e-47 |
| Msa0243940 | Msa0647360 | 0.805362 | 1.384580e-49 | -8.615850e-47 |
| Msa0243940 | Msa0660870 | 0.831629 | 1.498068e-55 | -8.615850e-47 |
| Msa0243940 | Msa0664160 | 0.825484 | 4.571182e-54 | -8.615850e-47 |
| Msa0243940 | Msa0716750 | 0.820049 | 8.422522e-53 | -8.615850e-47 |
| Msa0243940 | Msa0733200 | 0.823433 | 1.388514e-53 | -8.615850e-47 |
| Msa0243940 | Msa0739390 | 0.804132 | 2.502018e-49 | -8.615850e-47 |
| Msa0243940 | Msa0744500 | 0.807198 | 5.683599e-50 | -8.615850e-47 |
| Msa0243940 | Msa0752580 | 0.810621 | 1.052345e-50 | -8.615850e-47 |
| Msa0243940 | Msa0754500 | 0.803529 | 3.337302e-49 | -8.615850e-47 |
| Msa0243940 | Msa0757980 | 0.823968 | 1.040523e-53 | -8.615850e-47 |
| Msa0243940 | Msa0799280 | 0.827317 | 1.672564e-54 | -8.615850e-47 |
| Msa0243940 | Msa0818030 | 0.808006 | 3.828879e-50 | -8.615850e-47 |
| Msa0243940 | Msa0818040 | 0.802549 | 5.322567e-49 | -8.615850e-47 |
| Msa0243940 | Msa0826650 | 0.809238 | 2.089125e-50 | -8.615850e-47 |
| Msa0243940 | Msa0837500 | 0.810932 | 9.013820e-51 | -8.615850e-47 |
| Msa0243940 | Msa0864690 | 0.809286 | 2.039301e-50 | -8.615850e-47 |
| Msa0243940 | Msa0883350 | 0.834847 | 2.365382e-56 | -8.615850e-47 |
| Msa0243940 | Msa0883660 | 0.805596 | 1.236869e-49 | -8.615850e-47 |
| Msa0243940 | Msa0886660 | 0.844530 | 7.142737e-59 | -8.615850e-47 |
| Msa0243940 | Msa0902980 | 0.822476 | 2.321603e-53 | -8.615850e-47 |
| Msa0243940 | Msa0912160 | 0.817132 | 3.864057e-52 | -8.615850e-47 |
| Msa0243940 | Msa0912210 | 0.807916 | 4.000508e-50 | -8.615850e-47 |
| Msa0243940 | Msa0912470 | 0.814620 | 1.404112e-51 | -8.615850e-47 |
| Msa0243940 | Msa0922590 | 0.813522 | 2.452724e-51 | -8.615850e-47 |
| Msa0243940 | Msa0938420 | 0.810162 | 1.321907e-50 | -8.615850e-47 |
| Msa0243940 | Msa0946680 | 0.832341 | 9.989407e-56 | -8.615850e-47 |
| Msa0243940 | Msa0976640 | 0.819238 | 1.289809e-52 | -8.615850e-47 |
| Msa0243940 | Msa0987860 | 0.800928 | 1.144824e-48 | -8.615850e-47 |
| Msa0243940 | Msa1006460 | 0.818165 | 2.259472e-52 | -8.615850e-47 |
| Msa0243940 | Msa1006680 | 0.819740 | 9.908521e-53 | -8.615850e-47 |
| Msa0243940 | Msa1008340 | 0.826526 | 2.585300e-54 | -8.615850e-47 |
| Msa0243940 | Msa1009170 | 0.808375 | 3.193694e-50 | -8.615850e-47 |
| Msa0243940 | Msa1026500 | 0.801974 | 6.990397e-49 | -8.615850e-47 |
| Msa0243940 | Msa1029090 | 0.815461 | 9.137986e-52 | -8.615850e-47 |
| Msa0243940 | Msa1044090 | 0.856240 | 3.677496e-62 | -8.615850e-47 |
| Msa0243940 | Msa1049950 | 0.805203 | 1.494914e-49 | -8.615850e-47 |
| Msa0243940 | Msa1050500 | 0.824267 | 8.854795e-54 | -8.615850e-47 |
| Msa0243940 | Msa1100170 | 0.842365 | 2.704157e-58 | -8.615850e-47 |
| Msa0243940 | Msa1111760 | 0.817302 | 3.537556e-52 | -8.615850e-47 |
| Msa0243940 | Msa1121660 | 0.807157 | 5.796324e-50 | -8.615850e-47 |
| Msa0243940 | Msa1130350 | 0.825829 | 3.787396e-54 | -8.615850e-47 |
| Msa0243940 | Msa1130630 | 0.805182 | 1.510426e-49 | -8.615850e-47 |
| Msa0243940 | Msa1135660 | 0.803756 | 2.994425e-49 | -8.615850e-47 |
| Msa0243940 | Msa1138480 | 0.819580 | 1.077865e-52 | -8.615850e-47 |
| Msa0243940 | Msa1139240 | 0.845123 | 4.941862e-59 | -8.615850e-47 |
| Msa0243940 | Msa1151550 | 0.807068 | 6.054896e-50 | -8.615850e-47 |
| Msa0243940 | Msa1154070 | 0.816094 | 6.600057e-52 | -8.615850e-47 |
| Msa0243940 | Msa1156180 | 0.821602 | 3.700051e-53 | -8.615850e-47 |
| Msa0243940 | Msa1249940 | 0.816349 | 5.788354e-52 | -8.615850e-47 |
| Msa0243940 | Msa1279330 | 0.824210 | 9.132695e-54 | -8.615850e-47 |
| Msa0243940 | Msa1279850 | 0.825457 | 4.639658e-54 | -8.615850e-47 |
| Msa0243940 | Msa1279860 | 0.811138 | 8.131824e-51 | -8.615850e-47 |
| Msa0243940 | Msa1352060 | 0.800785 | 1.224365e-48 | -8.615850e-47 |
| Msa0243940 | Msa1423970 | 0.812930 | 3.309105e-51 | -8.615850e-47 |
| Msa0243940 | Msa1427810 | 0.806191 | 9.273517e-50 | -8.615850e-47 |
| Msa0243940 | Msa1441200 | 0.830074 | 3.604690e-55 | -8.615850e-47 |
| Msa0243940 | Msa1445250 | 0.819486 | 1.132738e-52 | -8.615850e-47 |
| Msa0243940 | Msa1459170 | 0.812775 | 3.577435e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243940 | MtrunA17_Chr2g0297711 | 89.583 | 576 | 25 | 1 | 1 | 576 | 1 | 541 | 0.0 | 1053 |
| Msa0243940 | MtrunA17_Chr2g0297701 | 51.123 | 579 | 263 | 5 | 13 | 575 | 9 | 583 | 0.0 | 580 |
| Msa0243940 | MtrunA17_Chr2g0297691 | 48.511 | 571 | 267 | 8 | 30 | 575 | 137 | 705 | 0.0 | 543 |
| Msa0243940 | MtrunA17_Chr2g0297681 | 47.359 | 568 | 272 | 6 | 33 | 575 | 138 | 703 | 0.0 | 536 |
| Msa0243940 | MtrunA17_Chr2g0297651 | 47.292 | 554 | 271 | 5 | 41 | 575 | 153 | 704 | 3.38e-176 | 515 |
| Msa0243940 | MtrunA17_Chr2g0297481 | 47.154 | 492 | 233 | 6 | 104 | 575 | 1 | 485 | 1.81e-152 | 447 |
| Msa0243940 | MtrunA17_Chr2g0297491 | 49.618 | 393 | 177 | 6 | 202 | 575 | 1 | 391 | 1.21e-124 | 372 |
| Msa0243940 | MtrunA17_Chr1g0211531 | 28.327 | 526 | 342 | 11 | 46 | 554 | 20 | 527 | 3.56e-58 | 203 |
| Msa0243940 | MtrunA17_Chr5g0410201 | 35.494 | 324 | 202 | 5 | 240 | 561 | 7 | 325 | 1.79e-57 | 195 |
| Msa0243940 | MtrunA17_Chr1g0211541 | 28.963 | 511 | 342 | 8 | 55 | 555 | 3 | 502 | 4.77e-56 | 197 |
| Msa0243940 | MtrunA17_Chr5g0410271 | 39.516 | 248 | 148 | 1 | 273 | 518 | 36 | 283 | 2.15e-55 | 190 |
| Msa0243940 | MtrunA17_Chr5g0410171 | 36.177 | 293 | 179 | 3 | 273 | 561 | 443 | 731 | 6.02e-54 | 195 |
| Msa0243940 | MtrunA17_Chr3g0100301 | 30.930 | 430 | 257 | 11 | 136 | 558 | 11 | 407 | 1.47e-53 | 187 |
| Msa0243940 | MtrunA17_Chr2g0297631 | 45.918 | 196 | 104 | 1 | 33 | 226 | 148 | 343 | 5.10e-52 | 191 |
| Msa0243940 | MtrunA17_Chr5g0410371 | 35.294 | 289 | 183 | 2 | 277 | 562 | 8 | 295 | 9.77e-50 | 174 |
| Msa0243940 | MtrunA17_Chr5g0443001 | 34.797 | 296 | 190 | 2 | 267 | 562 | 310 | 602 | 1.16e-49 | 181 |
| Msa0243940 | MtrunA17_Chr5g0410341 | 35.154 | 293 | 186 | 3 | 271 | 561 | 453 | 743 | 2.18e-49 | 182 |
| Msa0243940 | MtrunA17_Chr5g0410341 | 27.273 | 220 | 135 | 8 | 45 | 241 | 117 | 334 | 2.41e-11 | 66.6 |
| Msa0243940 | MtrunA17_Chr5g0410461 | 35.932 | 295 | 182 | 3 | 273 | 562 | 171 | 463 | 2.69e-49 | 177 |
| Msa0243940 | MtrunA17_Chr6g0456141 | 33.030 | 330 | 211 | 6 | 241 | 566 | 66 | 389 | 3.71e-48 | 172 |
| Msa0243940 | MtrunA17_Chr3g0100741 | 25.135 | 557 | 361 | 7 | 49 | 552 | 34 | 587 | 1.70e-46 | 172 |
| Msa0243940 | MtrunA17_Chr6g0456101 | 33.048 | 351 | 215 | 6 | 240 | 575 | 405 | 750 | 6.83e-46 | 172 |
| Msa0243940 | MtrunA17_Chr6g0457101 | 34.539 | 304 | 188 | 5 | 273 | 573 | 400 | 695 | 7.68e-45 | 169 |
| Msa0243940 | MtrunA17_Chr5g0410581 | 35.246 | 244 | 157 | 1 | 273 | 515 | 502 | 745 | 4.99e-42 | 161 |
| Msa0243940 | MtrunA17_Chr2g0297531 | 39.901 | 203 | 104 | 4 | 104 | 288 | 1 | 203 | 5.63e-42 | 150 |
| Msa0243940 | MtrunA17_Chr3g0096941 | 25.333 | 525 | 336 | 8 | 49 | 519 | 34 | 556 | 9.96e-42 | 159 |
| Msa0243940 | MtrunA17_Chr2g0286601 | 31.488 | 289 | 188 | 4 | 273 | 557 | 393 | 675 | 1.25e-37 | 148 |
| Msa0243940 | MtrunA17_Chr2g0286601 | 31.746 | 189 | 118 | 3 | 51 | 229 | 9 | 196 | 7.69e-17 | 84.3 |
| Msa0243940 | MtrunA17_Chr2g0286551 | 30.903 | 288 | 190 | 4 | 273 | 557 | 373 | 654 | 1.00e-36 | 145 |
| Msa0243940 | MtrunA17_Chr2g0286551 | 32.804 | 189 | 116 | 3 | 51 | 229 | 9 | 196 | 9.72e-18 | 87.0 |
| Msa0243940 | MtrunA17_Chr3g0098481 | 29.710 | 276 | 188 | 4 | 292 | 562 | 58 | 332 | 2.14e-34 | 133 |
| Msa0243940 | MtrunA17_Chr2g0284501 | 30.970 | 268 | 173 | 4 | 290 | 554 | 389 | 647 | 5.94e-32 | 131 |
| Msa0243940 | MtrunA17_Chr3g0102001 | 29.773 | 309 | 206 | 4 | 259 | 560 | 430 | 734 | 9.11e-31 | 127 |
| Msa0243940 | MtrunA17_Chr3g0098531 | 28.309 | 272 | 190 | 4 | 292 | 559 | 11 | 281 | 5.80e-30 | 119 |
| Msa0243940 | MtrunA17_Chr5g0410191 | 37.162 | 148 | 93 | 0 | 371 | 518 | 2 | 149 | 6.92e-30 | 116 |
| Msa0243940 | MtrunA17_Chr5g0439061 | 30.690 | 290 | 195 | 3 | 273 | 558 | 440 | 727 | 1.74e-29 | 124 |
| Msa0243940 | MtrunA17_Chr5g0410451 | 37.500 | 152 | 95 | 0 | 364 | 515 | 34 | 185 | 1.66e-28 | 114 |
| Msa0243940 | MtrunA17_Chr2g0297621 | 50.862 | 116 | 55 | 2 | 240 | 353 | 7 | 122 | 2.34e-28 | 109 |
| Msa0243940 | MtrunA17_Chr5g0410541 | 37.662 | 154 | 93 | 2 | 362 | 515 | 16 | 166 | 7.14e-26 | 105 |
| Msa0243940 | MtrunA17_Chr2g0284541 | 28.620 | 297 | 201 | 5 | 258 | 554 | 344 | 629 | 2.41e-25 | 110 |
| Msa0243940 | MtrunA17_Chr2g0286561 | 29.798 | 198 | 136 | 2 | 361 | 557 | 5 | 200 | 4.68e-25 | 103 |
| Msa0243940 | MtrunA17_Chr5g0410511 | 32.620 | 187 | 120 | 3 | 371 | 551 | 2 | 188 | 1.73e-24 | 101 |
| Msa0243940 | MtrunA17_Chr3g0098301 | 27.106 | 273 | 189 | 6 | 292 | 557 | 124 | 393 | 2.05e-23 | 102 |
| Msa0243940 | MtrunA17_Chr2g0297521 | 51.163 | 86 | 41 | 1 | 363 | 448 | 1 | 85 | 2.93e-22 | 91.3 |
| Msa0243940 | MtrunA17_Chr2g0297611 | 48.780 | 82 | 41 | 1 | 377 | 458 | 1 | 81 | 6.82e-22 | 90.5 |
| Msa0243940 | MtrunA17_Chr1g0211511 | 27.815 | 302 | 201 | 10 | 260 | 551 | 4 | 298 | 3.28e-20 | 92.0 |
| Msa0243940 | MtrunA17_Chr2g0297501 | 41.935 | 93 | 54 | 0 | 104 | 196 | 1 | 93 | 5.18e-20 | 85.1 |
| Msa0243940 | MtrunA17_Chr5g0439081 | 29.586 | 169 | 116 | 2 | 386 | 554 | 31 | 196 | 1.96e-19 | 87.4 |
| Msa0243940 | MtrunA17_Chr5g0410181 | 40.000 | 90 | 54 | 0 | 429 | 518 | 1 | 90 | 1.19e-17 | 79.7 |
| Msa0243940 | MtrunA17_Chr5g0439051 | 32.768 | 177 | 117 | 2 | 384 | 560 | 33 | 207 | 3.00e-17 | 81.3 |
| Msa0243940 | MtrunA17_Chr2g0286571 | 29.064 | 203 | 133 | 3 | 51 | 243 | 9 | 210 | 4.12e-15 | 76.6 |
| Msa0243940 | MtrunA17_Chr4g0030551 | 22.500 | 480 | 283 | 13 | 15 | 466 | 3 | 421 | 5.49e-14 | 74.7 |
| Msa0243940 | MtrunA17_Chr5g0410291 | 30.818 | 159 | 97 | 6 | 84 | 229 | 17 | 175 | 1.65e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0243940 | AT3G18670.1 | 32.545 | 550 | 335 | 12 | 51 | 572 | 53 | 594 | 7.86e-92 | 294 |
| Msa0243940 | AT5G35810.1 | 40.000 | 340 | 196 | 4 | 242 | 575 | 8 | 345 | 2.20e-75 | 243 |
| Msa0243940 | AT3G18670.2 | 37.500 | 304 | 185 | 5 | 271 | 572 | 349 | 649 | 8.24e-63 | 218 |
| Msa0243940 | AT3G18670.2 | 30.526 | 190 | 120 | 3 | 51 | 228 | 53 | 242 | 5.37e-19 | 91.3 |
| Msa0243940 | AT5G04690.1 | 31.158 | 475 | 297 | 9 | 113 | 562 | 143 | 612 | 1.41e-60 | 212 |
| Msa0243940 | AT5G04730.1 | 36.601 | 306 | 191 | 2 | 271 | 575 | 299 | 602 | 9.48e-54 | 193 |
| Msa0243940 | AT5G04680.2 | 28.709 | 519 | 299 | 12 | 113 | 562 | 12 | 528 | 1.42e-53 | 191 |
| Msa0243940 | AT5G04680.4 | 28.709 | 519 | 299 | 12 | 113 | 562 | 135 | 651 | 1.07e-52 | 191 |
| Msa0243940 | AT5G04680.3 | 28.295 | 516 | 291 | 12 | 113 | 562 | 135 | 637 | 1.76e-51 | 187 |
| Msa0243940 | AT5G04700.1 | 35.274 | 292 | 186 | 3 | 273 | 562 | 366 | 656 | 1.07e-50 | 186 |
| Msa0243940 | AT5G04690.3 | 32.990 | 291 | 189 | 4 | 273 | 562 | 347 | 632 | 6.49e-46 | 172 |
| Msa0243940 | AT5G04690.2 | 32.990 | 291 | 189 | 4 | 273 | 562 | 361 | 646 | 7.22e-46 | 172 |
| Msa0243940 | AT5G04680.1 | 32.226 | 301 | 191 | 4 | 273 | 562 | 382 | 680 | 3.53e-43 | 164 |
| Msa0243940 | AT3G54065.1 | 41.704 | 223 | 123 | 3 | 357 | 573 | 8 | 229 | 6.06e-43 | 154 |
| Msa0243940 | AT5G35830.1 | 38.764 | 178 | 102 | 3 | 24 | 196 | 62 | 237 | 5.47e-29 | 117 |
| Msa0243940 | AT3G54070.1 | 35.567 | 194 | 114 | 4 | 51 | 235 | 54 | 245 | 6.83e-26 | 107 |
| Msa0243940 | AT5G54710.1 | 24.085 | 519 | 309 | 20 | 78 | 543 | 64 | 550 | 2.85e-14 | 76.3 |
| Msa0243940 | AT5G54710.2 | 24.085 | 519 | 309 | 20 | 78 | 543 | 109 | 595 | 3.07e-14 | 76.3 |
| Msa0243940 | AT1G34050.1 | 24.756 | 513 | 303 | 22 | 83 | 551 | 55 | 528 | 8.02e-13 | 71.6 |
| Msa0243940 | AT2G24600.3 | 24.521 | 522 | 316 | 19 | 84 | 549 | 39 | 538 | 4.55e-11 | 66.2 |
| Msa0243940 | AT2G24600.4 | 24.521 | 522 | 316 | 19 | 84 | 549 | 39 | 538 | 4.55e-11 | 66.2 |
Find 88 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTCCTTTGCATTTGGGTTT+TGG | 0.168744 | 2_2:+21723947 | Msa0243940:five_prime_UTR |
| TGGAACTTGTTAGATGTCTT+TGG | 0.191053 | 2_2:+21728779 | Msa0243940:CDS |
| AATTTCTTCAGGGAAATATT+TGG | 0.196684 | 2_2:+21726339 | Msa0243940:intron |
| GAAGAGCACAAGTCCATTTC+TGG | 0.204770 | 2_2:+21728759 | Msa0243940:CDS |
| GAAGAGCTGCTCCTGAAATT+AGG | 0.245053 | 2_2:-21729122 | None:intergenic |
| GGAACTTGTTAGATGTCTTT+GGG | 0.248529 | 2_2:+21728780 | Msa0243940:CDS |
| AGGAATGACCCCTCTTACTA+TGG | 0.258797 | 2_2:+21726675 | Msa0243940:CDS |
| GGTCTGAACCTGATTTAATA+AGG | 0.275713 | 2_2:+21728920 | Msa0243940:CDS |
| TGCAAGCTTCCTTTGCATTT+GGG | 0.277855 | 2_2:+21723941 | Msa0243940:five_prime_UTR |
| ATTACTTGACTCAAAAGATT+TGG | 0.283267 | 2_2:+21726534 | Msa0243940:CDS |
| TCTCAGCTTAACCTAATTTC+AGG | 0.291297 | 2_2:+21729111 | Msa0243940:CDS |
| CTGTCTCCTTGTTCATATTT+CGG | 0.292695 | 2_2:-21727094 | None:intergenic |
| TTGCAAGCTTCCTTTGCATT+TGG | 0.297900 | 2_2:+21723940 | Msa0243940:five_prime_UTR |
| TGGAAATGAGTGTTGAAATT+AGG | 0.300644 | 2_2:-21729885 | None:intergenic |
| TTGTGCTTAGCTGCTGTATC+TGG | 0.304673 | 2_2:+21726586 | Msa0243940:CDS |
| TTGGAACTACAAAACAATAA+AGG | 0.331416 | 2_2:+21726553 | Msa0243940:CDS |
| TCAATATAATAACAATTTGT+AGG | 0.331722 | 2_2:-21726612 | None:intergenic |
| AAATGACACATGAAATACTA+TGG | 0.337385 | 2_2:+21729145 | Msa0243940:CDS |
| TCCACATCCCTTATTAAATC+AGG | 0.349899 | 2_2:-21728928 | None:intergenic |
| TCCTCGGCAAATATCTCATC+TGG | 0.366001 | 2_2:-21729802 | None:intergenic |
| GCTGCAATAACAAAGGATTA+TGG | 0.370183 | 2_2:+21726451 | Msa0243940:CDS |
| TTTAGTCTAATACATGAGTT+AGG | 0.380843 | 2_2:+21729006 | Msa0243940:CDS |
| ACATTTGATGCTACAAAAGT+TGG | 0.388589 | 2_2:+21728868 | Msa0243940:CDS |
| TGCATCAACAATGATTTGTA+TGG | 0.395835 | 2_2:+21726793 | Msa0243940:CDS |
| ATTTCCATGGTTTGATGTCA+TGG | 0.396226 | 2_2:+21730196 | Msa0243940:CDS |
| CCTTTGTTATTGCAGCGTTT+AGG | 0.409812 | 2_2:-21726444 | None:intergenic |
| GAGGAGTAGGGCATGATAAT+TGG | 0.411921 | 2_2:-21725868 | None:intergenic |
| TGGAACTACAAAACAATAAA+GGG | 0.421879 | 2_2:+21726554 | Msa0243940:CDS |
| GTCTCTATCTATCATGCCCT+TGG | 0.431769 | 2_2:-21726413 | None:intergenic |
| CAGCCATACAGTAGACATAT+TGG | 0.433950 | 2_2:+21726738 | Msa0243940:CDS |
| AAAGGAAGCTTGCAATGTTC+AGG | 0.444473 | 2_2:-21723932 | None:intergenic |
| CATCTAACAAGTTCCAGAAA+TGG | 0.446457 | 2_2:-21728772 | None:intergenic |
| TTTCCATGGTTTGATGTCAT+GGG | 0.452042 | 2_2:+21730197 | Msa0243940:CDS |
| TGGGGCATACTTCTCAATCA+TGG | 0.455534 | 2_2:+21728799 | Msa0243940:CDS |
| AGAACTTTGAATAAAACTAT+AGG | 0.461435 | 2_2:-21730252 | None:intergenic |
| GGAGACAGGCTTACATATCT+TGG | 0.470787 | 2_2:+21727109 | Msa0243940:CDS |
| AAGTTCTTGTATTTCCACTT+TGG | 0.476004 | 2_2:+21730268 | Msa0243940:CDS |
| CAGCAATGTGAAATATGCTT+CGG | 0.476131 | 2_2:-21728960 | None:intergenic |
| CTTCCAATATGTCTACTGTA+TGG | 0.477785 | 2_2:-21726741 | None:intergenic |
| GGGTGTCGATGTTGAGGAGT+AGG | 0.478741 | 2_2:-21725881 | None:intergenic |
| CTTCCTTCCAAGTTGCTATG+TGG | 0.483661 | 2_2:+21730105 | Msa0243940:CDS |
| TTAACTAGCTTGGAAAATAG+AGG | 0.493969 | 2_2:+21730352 | Msa0243940:exon |
| ATTTCAACACTCATTTCCAC+TGG | 0.495892 | 2_2:+21729889 | Msa0243940:CDS |
| TAGTAGCTCTTTATGCTCCT+CGG | 0.507619 | 2_2:-21729818 | None:intergenic |
| AGGTGATTGGATTGCATCCA+AGG | 0.507821 | 2_2:+21726396 | Msa0243940:CDS |
| GTCTGAACCTGATTTAATAA+GGG | 0.510014 | 2_2:+21728921 | Msa0243940:CDS |
| CGAAATATGAACAAGGAGAC+AGG | 0.510389 | 2_2:+21727095 | Msa0243940:CDS |
| CCTCGGCAAATATCTCATCT+GGG | 0.515049 | 2_2:-21729801 | None:intergenic |
| TACTAACAAAAGCAGAATCA+TGG | 0.521260 | 2_2:+21729836 | Msa0243940:CDS |
| ACAAATCATTGTTGATGCAA+AGG | 0.521580 | 2_2:-21726789 | None:intergenic |
| GAAATTAGGTTAAGCTGAGA+AGG | 0.526903 | 2_2:-21729108 | None:intergenic |
| CCTTGAGCACCTCGAATATG+TGG | 0.531423 | 2_2:-21726655 | None:intergenic |
| CCACATATTCGAGGTGCTCA+AGG | 0.533805 | 2_2:+21726655 | Msa0243940:CDS |
| ACATATTGGAAGAGGAGGAA+TGG | 0.535583 | 2_2:+21726752 | Msa0243940:CDS |
| AAAACAGTCAACACTGGCAT+TGG | 0.536607 | 2_2:+21727070 | Msa0243940:CDS |
| TACAGTAGACATATTGGAAG+AGG | 0.544937 | 2_2:+21726744 | Msa0243940:CDS |
| AGGGAAGGGTGTCGATGTTG+AGG | 0.546374 | 2_2:-21725887 | None:intergenic |
| AGATTCAATTATAGATCTTG+AGG | 0.546456 | 2_2:+21729038 | Msa0243940:CDS |
| ACATGAAATACTATGGTTTG+AGG | 0.547148 | 2_2:+21729152 | Msa0243940:CDS |
| TCTTGTAATAGGTGAAGGGA+AGG | 0.551117 | 2_2:-21725902 | None:intergenic |
| ACAGCAACATTTAACATACC+TGG | 0.552645 | 2_2:+21729919 | Msa0243940:CDS |
| TGCTATCATCATGCTTGTGA+TGG | 0.554623 | 2_2:-21730148 | None:intergenic |
| ACCTGATTTAATAAGGGATG+TGG | 0.556513 | 2_2:+21728927 | Msa0243940:CDS |
| TTTATCTTGTAATAGGTGAA+GGG | 0.563192 | 2_2:-21725906 | None:intergenic |
| GAACTTGTTAGATGTCTTTG+GGG | 0.568188 | 2_2:+21728781 | Msa0243940:CDS |
| GGTGTCGATGTTGAGGAGTA+GGG | 0.571518 | 2_2:-21725880 | None:intergenic |
| AATCCACATAGCAACTTGGA+AGG | 0.579484 | 2_2:-21730108 | None:intergenic |
| AAAGACTTACTAAGATCAGA+AGG | 0.584008 | 2_2:-21727140 | None:intergenic |
| CTTCCAAAACCCAAATGCAA+AGG | 0.601966 | 2_2:-21723950 | None:intergenic |
| AGTAGACATATTGGAAGAGG+AGG | 0.604673 | 2_2:+21726747 | Msa0243940:CDS |
| AATCAATCCACATAGCAACT+TGG | 0.607038 | 2_2:-21730112 | None:intergenic |
| TCATGTGCTTGCGATTGTGA+TGG | 0.610062 | 2_2:-21725839 | None:intergenic |
| CCTAAACGCTGCAATAACAA+AGG | 0.620975 | 2_2:+21726444 | Msa0243940:CDS |
| GGATGTCTACCACATATTCG+AGG | 0.624828 | 2_2:+21726646 | Msa0243940:CDS |
| CGGATAATATCAGACCAAAG+TGG | 0.625015 | 2_2:-21730282 | None:intergenic |
| CTCGGCAAATATCTCATCTG+GGG | 0.630881 | 2_2:-21729800 | None:intergenic |
| TGTTCTAAGAGAGCTTCTTG+AGG | 0.638785 | 2_2:+21724028 | Msa0243940:five_prime_UTR |
| AAAAGCAGCCATAGTAAGAG+GGG | 0.640611 | 2_2:-21726683 | None:intergenic |
| ATCACAATCGCAAGCACATG+AGG | 0.641135 | 2_2:+21725841 | Msa0243940:CDS |
| ATTAGGTTAAGCTGAGAAGG+AGG | 0.642478 | 2_2:-21729105 | None:intergenic |
| TGTTGCTGTAAATACTCCAG+TGG | 0.647306 | 2_2:-21729905 | None:intergenic |
| GGTGATTGGATTGCATCCAA+GGG | 0.650992 | 2_2:+21726397 | Msa0243940:CDS |
| CCCAGATGAGATATTTGCCG+AGG | 0.656847 | 2_2:+21729801 | Msa0243940:CDS |
| CTTGTAATAGGTGAAGGGAA+GGG | 0.660733 | 2_2:-21725901 | None:intergenic |
| ATGGATGTACAGAAACACAT+AGG | 0.663164 | 2_2:+21728818 | Msa0243940:CDS |
| GAACCCATGACATCAAACCA+TGG | 0.676071 | 2_2:-21730200 | None:intergenic |
| ATTGGTCCGAAATATGAACA+AGG | 0.697800 | 2_2:+21727088 | Msa0243940:CDS |
| GCAACATTTAACATACCTGG+TGG | 0.715981 | 2_2:+21729922 | Msa0243940:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATATTATAATTTATATTTT+TGG | + | chr2_2:21724332-21724351 | Msa0243940:intron | 0.0% |
| !!! | TTTATTTTTTTTATAGAATG+AGG | + | chr2_2:21725964-21725983 | Msa0243940:intron | 10.0% |
| !!! | TCAATTTTCAAATATTTTAT+TGG | - | chr2_2:21727306-21727325 | None:intergenic | 10.0% |
| !!! | AGAAACTATATTAATTTTAT+AGG | + | chr2_2:21728643-21728662 | Msa0243940:intron | 10.0% |
| !! | TGCTTAGAAAAAATATAATT+AGG | - | chr2_2:21724098-21724117 | None:intergenic | 15.0% |
| !! | GATTTAAGAAAAAATATGTT+AGG | - | chr2_2:21724179-21724198 | None:intergenic | 15.0% |
| !! | AACAAATTTATAGATATGAT+TGG | - | chr2_2:21724417-21724436 | None:intergenic | 15.0% |
| !! | GTTTACATCAAAATTAAATA+TGG | - | chr2_2:21724845-21724864 | None:intergenic | 15.0% |
| !!! | TCATATAGATTTTTTTTTAG+AGG | + | chr2_2:21724879-21724898 | Msa0243940:intron | 15.0% |
| !!! | CAAAAATTTGAAATTATTCT+TGG | + | chr2_2:21724933-21724952 | Msa0243940:intron | 15.0% |
| !!! | GTTTTAAGCATATTTATTAA+AGG | - | chr2_2:21724988-21725007 | None:intergenic | 15.0% |
| !! | ATGCATATTATCATTTAATT+AGG | + | chr2_2:21725102-21725121 | Msa0243940:intron | 15.0% |
| !!! | ATTGATATTTTAAAACTTGA+TGG | - | chr2_2:21725439-21725458 | None:intergenic | 15.0% |
| !!! | AACATTATTATTTCTATCAA+AGG | + | chr2_2:21725470-21725489 | Msa0243940:intron | 15.0% |
| !!! | TAATTTTAGTTACAGAAAAA+TGG | + | chr2_2:21725787-21725806 | Msa0243940:intron | 15.0% |
| !! | CAAAATAAATTATGTATTTC+AGG | + | chr2_2:21726201-21726220 | Msa0243940:intron | 15.0% |
| !! | TCAATATAATAACAATTTGT+AGG | - | chr2_2:21726615-21726634 | None:intergenic | 15.0% |
| !! | AATTATAAGAATTTGATCAA+TGG | - | chr2_2:21727249-21727268 | None:intergenic | 15.0% |
| !!! | GAATGTTTCAATAATTATTT+TGG | + | chr2_2:21727522-21727541 | Msa0243940:intron | 15.0% |
| !!! | TTAAATGCTCTTTATTTTTT+TGG | + | chr2_2:21727597-21727616 | Msa0243940:intron | 15.0% |
| !! | TATTCAATATATCTAAAAAG+TGG | - | chr2_2:21727686-21727705 | None:intergenic | 15.0% |
| !!! | GATTTTTGTCAAAAAAAAAA+AGG | + | chr2_2:21727894-21727913 | Msa0243940:intron | 15.0% |
| !! | GTCATAATATAATGTATATA+AGG | - | chr2_2:21729715-21729734 | None:intergenic | 15.0% |
| !!! | TTTTTCTTCTTTATTTCTAT+TGG | - | chr2_2:21729766-21729785 | None:intergenic | 15.0% |
| !! | ATAAAGAAGAAAAATTCTAA+TGG | + | chr2_2:21729772-21729791 | Msa0243940:CDS | 15.0% |
| !! | AAAGAATTAAGAAAGAGAAT+TGG | - | chr2_2:21724140-21724159 | None:intergenic | 20.0% |
| !!! | ATTCTCAGAATTTTTTTTAG+CGG | - | chr2_2:21724229-21724248 | None:intergenic | 20.0% |
| !!! | TTTCAAAATCTTTTTCTTGA+AGG | + | chr2_2:21724466-21724485 | Msa0243940:intron | 20.0% |
| !! | TCTGTATTAATAAATTGGAA+AGG | - | chr2_2:21724571-21724590 | None:intergenic | 20.0% |
| !!! | ATATTTTACAAACTAGTTGT+TGG | + | chr2_2:21724816-21724835 | Msa0243940:intron | 20.0% |
| !! | GTTTACATGATTAATCTATA+TGG | - | chr2_2:21724908-21724927 | None:intergenic | 20.0% |
| !! | TAAAGGACATCAAATAATTT+GGG | - | chr2_2:21724971-21724990 | None:intergenic | 20.0% |
| !! | TTAAAGGACATCAAATAATT+TGG | - | chr2_2:21724972-21724991 | None:intergenic | 20.0% |
| !! | TGTTTAGGAATAAAATTAAG+AGG | + | chr2_2:21725192-21725211 | Msa0243940:intron | 20.0% |
| !!! | TCAAACTTTTATCTTGTAAT+AGG | - | chr2_2:21725916-21725935 | None:intergenic | 20.0% |
| !!! | TTCTAGTGCTTTTTTATATA+GGG | - | chr2_2:21726377-21726396 | None:intergenic | 20.0% |
| !! | ATTATATTGACCAAGAAAAA+TGG | + | chr2_2:21726625-21726644 | Msa0243940:CDS | 20.0% |
| !! | TGGAGGAATAATAATAATTA+TGG | - | chr2_2:21726984-21727003 | None:intergenic | 20.0% |
| !!! | CTTAGTTTTCTAAATAAACA+TGG | - | chr2_2:21727175-21727194 | None:intergenic | 20.0% |
| !!! | ATAATTTTTTATGCCTTCAA+TGG | + | chr2_2:21727263-21727282 | Msa0243940:intron | 20.0% |
| !!! | TAATTTTTTATGCCTTCAAT+GGG | + | chr2_2:21727264-21727283 | Msa0243940:intron | 20.0% |
| !!! | TGGTTTTTGTCAAAAAAAAA+AGG | - | chr2_2:21727471-21727490 | None:intergenic | 20.0% |
| !! | TATTCAATGTATCTAAAAAG+TGG | + | chr2_2:21727747-21727766 | Msa0243940:intron | 20.0% |
| !!! | GAATGTTTCAATCATTATTT+TGG | - | chr2_2:21727842-21727861 | None:intergenic | 20.0% |
| !!! | TTCTAAAATTCGATTTCATT+TGG | + | chr2_2:21728317-21728336 | Msa0243940:intron | 20.0% |
| !!! | TCACAAAAAATTATTTTCCT+TGG | - | chr2_2:21728514-21728533 | None:intergenic | 20.0% |
| !!! | TTTTTGAAAAATGACCATTA+TGG | - | chr2_2:21728543-21728562 | None:intergenic | 20.0% |
| !!! | AAAACCTACTGTTTTTTTTT+GGG | + | chr2_2:21728618-21728637 | Msa0243940:intron | 20.0% |
| !! | TTATACATATGACATATGTA+TGG | - | chr2_2:21729197-21729216 | None:intergenic | 20.0% |
| !!! | TTTTATGTGTAAGCATTAAT+CGG | + | chr2_2:21729372-21729391 | Msa0243940:intron | 20.0% |
| !! | AATTAGTAATTGATTGAGTT+GGG | - | chr2_2:21729458-21729477 | None:intergenic | 20.0% |
| !! | AAATTAGTAATTGATTGAGT+TGG | - | chr2_2:21729459-21729478 | None:intergenic | 20.0% |
| !! | ACTCAGTATATTACTTTATT+AGG | + | chr2_2:21729614-21729633 | Msa0243940:intron | 20.0% |
| !! | CAAAATAAAAAAATAACACC+AGG | - | chr2_2:21729640-21729659 | None:intergenic | 20.0% |
| !!! | AGGTCTTAAAACAAATTTTA+TGG | - | chr2_2:21729673-21729692 | None:intergenic | 20.0% |
| !! | AATATAATGTATATAAGGAC+CGG | - | chr2_2:21729710-21729729 | None:intergenic | 20.0% |
| !! | ACATTATATTATGACATTGT+AGG | + | chr2_2:21729720-21729739 | Msa0243940:intron | 20.0% |
| !!! | TTTTTCATTACATATTTCCA+TGG | + | chr2_2:21730183-21730202 | Msa0243940:CDS | 20.0% |
| !! | GCAAAAACAGAAATAAAATA+TGG | - | chr2_2:21730225-21730244 | None:intergenic | 20.0% |
| !! | AGAACTTTGAATAAAACTAT+AGG | - | chr2_2:21730255-21730274 | None:intergenic | 20.0% |
| !! | ACATACAAAAATAAGAAGAT+CGG | - | chr2_2:21730305-21730324 | None:intergenic | 20.0% |
| !!! | TTCTCAGAATTTTTTTTAGC+GGG | - | chr2_2:21724228-21724247 | None:intergenic | 25.0% |
| ! | AAGCATGAATTAAACTCAAA+CGG | - | chr2_2:21724252-21724271 | None:intergenic | 25.0% |
| ! | TAAGTTTCAAAATAAACACG+TGG | + | chr2_2:21724298-21724317 | Msa0243940:intron | 25.0% |
| ! | TGTAAAAGAATAGGAAGAAA+AGG | - | chr2_2:21724500-21724519 | None:intergenic | 25.0% |
| ! | AAGAACTTGTGTAAAAGAAT+AGG | - | chr2_2:21724509-21724528 | None:intergenic | 25.0% |
| ! | CGCTATCTGTATTAATAAAT+TGG | - | chr2_2:21724576-21724595 | None:intergenic | 25.0% |
| !!! | TTTTTTTGTCAAGTAACCTA+GGG | + | chr2_2:21724660-21724679 | Msa0243940:intron | 25.0% |
| ! | AAGTCAATAGTACATTATGT+GGG | - | chr2_2:21725128-21725147 | None:intergenic | 25.0% |
| ! | AAAGTCAATAGTACATTATG+TGG | - | chr2_2:21725129-21725148 | None:intergenic | 25.0% |
| !! | TTTTAGTCAACCATAAATCT+TGG | + | chr2_2:21725146-21725165 | Msa0243940:intron | 25.0% |
| ! | ATACCTTTAACCAAGATTTA+TGG | - | chr2_2:21725159-21725178 | None:intergenic | 25.0% |
| ! | ATAAATCTTGGTTAAAGGTA+TGG | + | chr2_2:21725158-21725177 | Msa0243940:intron | 25.0% |
| !! | ATAAAATTAAGAGGTGTGTA+AGG | + | chr2_2:21725201-21725220 | Msa0243940:intron | 25.0% |
| !! | TAAAATTAAGAGGTGTGTAA+GGG | + | chr2_2:21725202-21725221 | Msa0243940:intron | 25.0% |
| ! | TTGTATCAACTTGCAATAAT+AGG | - | chr2_2:21725365-21725384 | None:intergenic | 25.0% |
| ! | ATTAGTAATAGAAAGTAGCT+AGG | + | chr2_2:21725546-21725565 | Msa0243940:intron | 25.0% |
| ! | TGAAATAATGAAACGATTGA+AGG | + | chr2_2:21725601-21725620 | Msa0243940:intron | 25.0% |
| ! | GAAATAATGAAACGATTGAA+GGG | + | chr2_2:21725602-21725621 | Msa0243940:intron | 25.0% |
| ! | ATCTCTCAAAAATAACTCAA+AGG | - | chr2_2:21725731-21725750 | None:intergenic | 25.0% |
| ! | TTTATCTTGTAATAGGTGAA+GGG | - | chr2_2:21725909-21725928 | None:intergenic | 25.0% |
| !! | TTTTATCTTGTAATAGGTGA+AGG | - | chr2_2:21725910-21725929 | None:intergenic | 25.0% |
| !! | AGTTTCATGAGTGATTTTAT+TGG | + | chr2_2:21726091-21726110 | Msa0243940:intron | 25.0% |
| !!! | CTTTACTTTTAGTCAAAGTA+GGG | - | chr2_2:21726140-21726159 | None:intergenic | 25.0% |
| !!! | ACTTTACTTTTAGTCAAAGT+AGG | - | chr2_2:21726141-21726160 | None:intergenic | 25.0% |
| ! | TACTTTGACTAAAAGTAAAG+TGG | + | chr2_2:21726140-21726159 | Msa0243940:intron | 25.0% |
| ! | TCAACTTTACTTCTACAAAA+TGG | + | chr2_2:21726226-21726245 | Msa0243940:intron | 25.0% |
| !!! | GGGTAATGTGTTTTTTTTAA+AGG | - | chr2_2:21726252-21726271 | None:intergenic | 25.0% |
| !! | TGTTTCGTTTCATTTTGTAT+GGG | - | chr2_2:21726272-21726291 | None:intergenic | 25.0% |
| !! | ATGTTTCGTTTCATTTTGTA+TGG | - | chr2_2:21726273-21726292 | None:intergenic | 25.0% |
| !!! | AACTCTCTTTTAATTTCTTC+AGG | + | chr2_2:21726328-21726347 | Msa0243940:intron | 25.0% |
| !!! | ACTCTCTTTTAATTTCTTCA+GGG | + | chr2_2:21726329-21726348 | Msa0243940:intron | 25.0% |
| ! | AATTTCTTCAGGGAAATATT+TGG | + | chr2_2:21726339-21726358 | Msa0243940:intron | 25.0% |
| !!! | TCTAGTGCTTTTTTATATAG+GGG | - | chr2_2:21726376-21726395 | None:intergenic | 25.0% |
| !!! | CTTCTAGTGCTTTTTTATAT+AGG | - | chr2_2:21726378-21726397 | None:intergenic | 25.0% |
| !!! | CTATATAAAAAAGCACTAGA+AGG | + | chr2_2:21726376-21726395 | Msa0243940:CDS | 25.0% |
| !! | AAATCATACTCATTTTGTAG+AGG | + | chr2_2:21726501-21726520 | Msa0243940:CDS | 25.0% |
| ! | ATTACTTGACTCAAAAGATT+TGG | + | chr2_2:21726534-21726553 | Msa0243940:CDS | 25.0% |
| ! | TTGGAACTACAAAACAATAA+AGG | + | chr2_2:21726553-21726572 | Msa0243940:CDS | 25.0% |
| ! | TGGAACTACAAAACAATAAA+GGG | + | chr2_2:21726554-21726573 | Msa0243940:CDS | 25.0% |
| ! | AAACATATTTAACCCATTGA+AGG | - | chr2_2:21727279-21727298 | None:intergenic | 25.0% |
| !!! | AAAAAAGGTTTGATTTTCCT+CGG | - | chr2_2:21727456-21727475 | None:intergenic | 25.0% |
| !!! | ACTCATTGAAATGTTTTTTG+AGG | + | chr2_2:21727572-21727591 | Msa0243940:intron | 25.0% |
| ! | GTCAAAAAAAAAAAGGTTTG+AGG | + | chr2_2:21727901-21727920 | Msa0243940:intron | 25.0% |
| ! | CAGAATTGTTAGTAATGATT+CGG | - | chr2_2:21728215-21728234 | None:intergenic | 25.0% |
| ! | TAGTTCATGATTTATCAGTA+TGG | + | chr2_2:21728264-21728283 | Msa0243940:intron | 25.0% |
| !!! | GAAAACCTACTGTTTTTTTT+TGG | + | chr2_2:21728617-21728636 | Msa0243940:intron | 25.0% |
| !!! | GCATCAAATGTTATTTTTGA+CGG | - | chr2_2:21728859-21728878 | None:intergenic | 25.0% |
| ! | TTTAGTCTAATACATGAGTT+AGG | + | chr2_2:21729006-21729025 | Msa0243940:CDS | 25.0% |
| ! | AGATTCAATTATAGATCTTG+AGG | + | chr2_2:21729038-21729057 | Msa0243940:CDS | 25.0% |
| ! | AAATGACACATGAAATACTA+TGG | + | chr2_2:21729145-21729164 | Msa0243940:CDS | 25.0% |
| ! | AGATAATATATAGGAGCAAT+TGG | + | chr2_2:21729295-21729314 | Msa0243940:intron | 25.0% |
| ! | TTTATGTGTAAGCATTAATC+GGG | + | chr2_2:21729373-21729392 | Msa0243940:intron | 25.0% |
| !!! | GCTTGTTTTTGTAAATAGTT+TGG | - | chr2_2:21729970-21729989 | None:intergenic | 25.0% |
| !!! | GTTTTTTCTTGGTTGAAATA+GGG | - | chr2_2:21730328-21730347 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTTGGTTGAAAT+AGG | - | chr2_2:21730329-21730348 | None:intergenic | 25.0% |
| !!! | TAGTTAAGCATGTTTTTTCT+TGG | - | chr2_2:21730339-21730358 | None:intergenic | 25.0% |
| !!! | GTTTTTTTGTCAAGTAACCT+AGG | + | chr2_2:21724659-21724678 | Msa0243940:intron | 30.0% |
| AAAAGTGAATTCTAAACCCT+AGG | - | chr2_2:21724679-21724698 | None:intergenic | 30.0% | |
| !! | AGGGTTTAGAATTCACTTTT+AGG | + | chr2_2:21724679-21724698 | Msa0243940:intron | 30.0% |
| !! | GGGTTTAGAATTCACTTTTA+GGG | + | chr2_2:21724680-21724699 | Msa0243940:intron | 30.0% |
| ATTGTAATATATAGCAGTCG+AGG | - | chr2_2:21724734-21724753 | None:intergenic | 30.0% | |
| CAACCATAAATCTTGGTTAA+AGG | + | chr2_2:21725153-21725172 | Msa0243940:intron | 30.0% | |
| !! | ATGGATTGGAAAAACTGTTT+AGG | + | chr2_2:21725177-21725196 | Msa0243940:intron | 30.0% |
| !! | GTGCTTTTTGTTAAGTCAAT+TGG | + | chr2_2:21725236-21725255 | Msa0243940:intron | 30.0% |
| TGATGGAAAACTGATATCAA+AGG | - | chr2_2:21725422-21725441 | None:intergenic | 30.0% | |
| TAGTAGATACACCTTTAGAT+CGG | - | chr2_2:21725639-21725658 | None:intergenic | 30.0% | |
| TAGTTACAGAAAAATGGAGA+TGG | + | chr2_2:21725793-21725812 | Msa0243940:intron | 30.0% | |
| ACAAATCATTGTTGATGCAA+AGG | - | chr2_2:21726792-21726811 | None:intergenic | 30.0% | |
| ! | TGCATCAACAATGATTTGTA+TGG | + | chr2_2:21726793-21726812 | Msa0243940:CDS | 30.0% |
| TCCATAATTATAACCCACTT+GGG | + | chr2_2:21726831-21726850 | Msa0243940:intron | 30.0% | |
| AAAATTTCCCAAAAACTGCT+AGG | - | chr2_2:21727024-21727043 | None:intergenic | 30.0% | |
| AAAGACTTACTAAGATCAGA+AGG | - | chr2_2:21727143-21727162 | None:intergenic | 30.0% | |
| ! | TTAATTGCAGAAGTTTTCCT+CGG | - | chr2_2:21727430-21727449 | None:intergenic | 30.0% |
| TTATTAAGATATACTCCCTC+CGG | + | chr2_2:21727640-21727659 | Msa0243940:intron | 30.0% | |
| ! | GTTTTGCTTATAATAGTGAC+CGG | - | chr2_2:21727662-21727681 | None:intergenic | 30.0% |
| TTGCTTATAATAGTGACTAG+AGG | + | chr2_2:21727774-21727793 | Msa0243940:intron | 30.0% | |
| TGCTTATAATAGTGACTAGA+GGG | + | chr2_2:21727775-21727794 | Msa0243940:intron | 30.0% | |
| TTAACTAACGAGGAAAACTT+CGG | - | chr2_2:21727946-21727965 | None:intergenic | 30.0% | |
| !! | CCGTATCAAATTTTAGAAGA+GGG | - | chr2_2:21728113-21728132 | None:intergenic | 30.0% |
| !! | CCCTCTTCTAAAATTTGATA+CGG | + | chr2_2:21728110-21728129 | Msa0243940:intron | 30.0% |
| !! | ACCGTATCAAATTTTAGAAG+AGG | - | chr2_2:21728114-21728133 | None:intergenic | 30.0% |
| CGAATCATTACTAACAATTC+TGG | + | chr2_2:21728213-21728232 | Msa0243940:intron | 30.0% | |
| TGAATTGAAACAATCCAGTT+CGG | + | chr2_2:21728239-21728258 | Msa0243940:intron | 30.0% | |
| CAGTATGGTTCAAAACAATT+CGG | + | chr2_2:21728279-21728298 | Msa0243940:intron | 30.0% | |
| ! | CAGTTCAGTTTGAAATAGTT+TGG | + | chr2_2:21728378-21728397 | Msa0243940:intron | 30.0% |
| !!! | TGGTTTGTTTTGAAACAGTT+CGG | + | chr2_2:21728398-21728417 | Msa0243940:intron | 30.0% |
| !! | TTGGTATTGACTAAGAACTT+GGG | - | chr2_2:21728495-21728514 | None:intergenic | 30.0% |
| AAAAATGACCATTATGGTGT+TGG | - | chr2_2:21728537-21728556 | None:intergenic | 30.0% | |
| AAGAGGGAAGTTATAATATG+TGG | - | chr2_2:21728686-21728705 | None:intergenic | 30.0% | |
| ACATATTATAACTTCCCTCT+TGG | + | chr2_2:21728685-21728704 | Msa0243940:intron | 30.0% | |
| TGAAATATTCATGACCAAGA+GGG | - | chr2_2:21728702-21728721 | None:intergenic | 30.0% | |
| TTGAAATATTCATGACCAAG+AGG | - | chr2_2:21728703-21728722 | None:intergenic | 30.0% | |
| ACCAATCAAATTATGTGTGT+AGG | + | chr2_2:21728733-21728752 | Msa0243940:intron | 30.0% | |
| ACATTTGATGCTACAAAAGT+TGG | + | chr2_2:21728868-21728887 | Msa0243940:CDS | 30.0% | |
| ! | AGTTGGAAATTTTCACTTTG+TGG | + | chr2_2:21728885-21728904 | Msa0243940:CDS | 30.0% |
| GTCTGAACCTGATTTAATAA+GGG | + | chr2_2:21728921-21728940 | Msa0243940:CDS | 30.0% | |
| ACATGAAATACTATGGTTTG+AGG | + | chr2_2:21729152-21729171 | Msa0243940:CDS | 30.0% | |
| CATATGTATGGTGAAATAGT+GGG | - | chr2_2:21729185-21729204 | None:intergenic | 30.0% | |
| ACATATGTATGGTGAAATAG+TGG | - | chr2_2:21729186-21729205 | None:intergenic | 30.0% | |
| TTATGTGTAAGCATTAATCG+GGG | + | chr2_2:21729374-21729393 | Msa0243940:intron | 30.0% | |
| ! | TTTTTCGTTAAGTAGTCTAG+TGG | + | chr2_2:21729482-21729501 | Msa0243940:intron | 30.0% |
| AGATTCACACAATTTACATG+TGG | + | chr2_2:21729508-21729527 | Msa0243940:intron | 30.0% | |
| GTATATTACTTTATTAGGCC+TGG | + | chr2_2:21729619-21729638 | Msa0243940:intron | 30.0% | |
| TACTAACAAAAGCAGAATCA+TGG | + | chr2_2:21729836-21729855 | Msa0243940:CDS | 30.0% | |
| !! | TGGAAATGAGTGTTGAAATT+AGG | - | chr2_2:21729888-21729907 | None:intergenic | 30.0% |
| AAGTTCTTGTATTTCCACTT+TGG | + | chr2_2:21730268-21730287 | Msa0243940:CDS | 30.0% | |
| AAAAACATGCTTAACTAGCT+TGG | + | chr2_2:21730342-21730361 | Msa0243940:exon | 30.0% | |
| ! | TTAACTAGCTTGGAAAATAG+AGG | + | chr2_2:21730352-21730371 | Msa0243940:exon | 30.0% |
| GAGAAGGATAGTTGTAAGAA+TGG | - | chr2_2:21724204-21724223 | None:intergenic | 35.0% | |
| !!! | ATTTTTTTTAGCGGGAGAGA+AGG | - | chr2_2:21724220-21724239 | None:intergenic | 35.0% |
| !!! | ACTTTTAGGGTGAACAAATG+AGG | + | chr2_2:21724693-21724712 | Msa0243940:intron | 35.0% |
| ! | GGTGAACAAATGAGGTATTT+GGG | + | chr2_2:21724701-21724720 | Msa0243940:intron | 35.0% |
| ! | GTGAACAAATGAGGTATTTG+GGG | + | chr2_2:21724702-21724721 | Msa0243940:intron | 35.0% |
| TAATATATAGCAGTCGAGGT+TGG | - | chr2_2:21724730-21724749 | None:intergenic | 35.0% | |
| ! | TCTTGGTTAAAGGTATGGAT+TGG | + | chr2_2:21725163-21725182 | Msa0243940:intron | 35.0% |
| AAAGCAAATGCTAGCTAACT+AGG | + | chr2_2:21725314-21725333 | Msa0243940:intron | 35.0% | |
| TGGAAAACTGATATCAAAGG+CGG | - | chr2_2:21725419-21725438 | None:intergenic | 35.0% | |
| ATGAACAAACACGAGAAATG+TGG | - | chr2_2:21725504-21725523 | None:intergenic | 35.0% | |
| TAATGAAACGATTGAAGGGA+AGG | + | chr2_2:21725606-21725625 | Msa0243940:intron | 35.0% | |
| AATGAAACGATTGAAGGGAA+GGG | + | chr2_2:21725607-21725626 | Msa0243940:intron | 35.0% | |
| AGTAGATACACCTTTAGATC+GGG | - | chr2_2:21725638-21725657 | None:intergenic | 35.0% | |
| !! | AAAAAGCACTAGAAGGTGAT+TGG | + | chr2_2:21726383-21726402 | Msa0243940:CDS | 35.0% |
| GCTGCAATAACAAAGGATTA+TGG | + | chr2_2:21726451-21726470 | Msa0243940:CDS | 35.0% | |
| ! | TACTCATTTTGTAGAGGAGT+TGG | + | chr2_2:21726507-21726526 | Msa0243940:CDS | 35.0% |
| !! | TGGTAGACATCCATTTTTCT+TGG | - | chr2_2:21726638-21726657 | None:intergenic | 35.0% |
| AAAAAGCAGCCATAGTAAGA+GGG | - | chr2_2:21726687-21726706 | None:intergenic | 35.0% | |
| TAAAAAGCAGCCATAGTAAG+AGG | - | chr2_2:21726688-21726707 | None:intergenic | 35.0% | |
| !!! | CTTACTATGGCTGCTTTTTA+TGG | + | chr2_2:21726688-21726707 | Msa0243940:CDS | 35.0% |
| CTTCCAATATGTCTACTGTA+TGG | - | chr2_2:21726744-21726763 | None:intergenic | 35.0% | |
| TACAGTAGACATATTGGAAG+AGG | + | chr2_2:21726744-21726763 | Msa0243940:CDS | 35.0% | |
| GTCCATAATTATAACCCACT+TGG | + | chr2_2:21726830-21726849 | Msa0243940:intron | 35.0% | |
| !! | ACCCAAGTGGGTTATAATTA+TGG | - | chr2_2:21726835-21726854 | None:intergenic | 35.0% |
| TAATTATAACCCACTTGGGT+TGG | + | chr2_2:21726835-21726854 | Msa0243940:intron | 35.0% | |
| !! | ATTCTCTCTGGAGTCAATTT+AGG | + | chr2_2:21726915-21726934 | Msa0243940:intron | 35.0% |
| ! | AATTCACTCCTAGCAGTTTT+TGG | + | chr2_2:21727013-21727032 | Msa0243940:intron | 35.0% |
| ! | ATTCACTCCTAGCAGTTTTT+GGG | + | chr2_2:21727014-21727033 | Msa0243940:intron | 35.0% |
| GTTACAAAAACAGTCAACAC+TGG | + | chr2_2:21727064-21727083 | Msa0243940:CDS | 35.0% | |
| ATTGGTCCGAAATATGAACA+AGG | + | chr2_2:21727088-21727107 | Msa0243940:CDS | 35.0% | |
| CTGTCTCCTTGTTCATATTT+CGG | - | chr2_2:21727097-21727116 | None:intergenic | 35.0% | |
| TGATGTTGACACATATGCAA+AGG | + | chr2_2:21727323-21727342 | Msa0243940:intron | 35.0% | |
| ! | AAAAAGGTTTGAGGTTTCCT+CGG | + | chr2_2:21727910-21727929 | Msa0243940:intron | 35.0% |
| ! | TTAACTGCAGAAGTTTTCCT+CGG | + | chr2_2:21727962-21727981 | Msa0243940:intron | 35.0% |
| TAAATTACTCAAATGCCCCT+CGG | - | chr2_2:21728028-21728047 | None:intergenic | 35.0% | |
| !!! | GATACGGTTGTTTTTAGTAG+AGG | + | chr2_2:21728126-21728145 | Msa0243940:intron | 35.0% |
| !!! | CGGTGTTTTTTAGTTTGCTT+CGG | - | chr2_2:21728195-21728214 | None:intergenic | 35.0% |
| AATCATGAACTAAACCGAAC+TGG | - | chr2_2:21728256-21728275 | None:intergenic | 35.0% | |
| TGGTTCAAAACAATTCGGTT+CGG | + | chr2_2:21728284-21728303 | Msa0243940:intron | 35.0% | |
| !! | CTTGGTATTGACTAAGAACT+TGG | - | chr2_2:21728496-21728515 | None:intergenic | 35.0% |
| CAAGTTCTTAGTCAATACCA+AGG | + | chr2_2:21728494-21728513 | Msa0243940:intron | 35.0% | |
| ! | TTTTGTGACCAACACCATAA+TGG | + | chr2_2:21728526-21728545 | Msa0243940:intron | 35.0% |
| CTTGCCCAAAAAAAAACAGT+AGG | - | chr2_2:21728625-21728644 | None:intergenic | 35.0% | |
| GCCTACACACATAATTTGAT+TGG | - | chr2_2:21728737-21728756 | None:intergenic | 35.0% | |
| CATCTAACAAGTTCCAGAAA+TGG | - | chr2_2:21728775-21728794 | None:intergenic | 35.0% | |
| !! | TGGAACTTGTTAGATGTCTT+TGG | + | chr2_2:21728779-21728798 | Msa0243940:CDS | 35.0% |
| !! | GGAACTTGTTAGATGTCTTT+GGG | + | chr2_2:21728780-21728799 | Msa0243940:CDS | 35.0% |
| !! | GAACTTGTTAGATGTCTTTG+GGG | + | chr2_2:21728781-21728800 | Msa0243940:CDS | 35.0% |
| ATGGATGTACAGAAACACAT+AGG | + | chr2_2:21728818-21728837 | Msa0243940:CDS | 35.0% | |
| GGTCTGAACCTGATTTAATA+AGG | + | chr2_2:21728920-21728939 | Msa0243940:CDS | 35.0% | |
| ACCTGATTTAATAAGGGATG+TGG | + | chr2_2:21728927-21728946 | Msa0243940:CDS | 35.0% | |
| TCCACATCCCTTATTAAATC+AGG | - | chr2_2:21728931-21728950 | None:intergenic | 35.0% | |
| CAGCAATGTGAAATATGCTT+CGG | - | chr2_2:21728963-21728982 | None:intergenic | 35.0% | |
| GAAATTAGGTTAAGCTGAGA+AGG | - | chr2_2:21729111-21729130 | None:intergenic | 35.0% | |
| TCTCAGCTTAACCTAATTTC+AGG | + | chr2_2:21729111-21729130 | Msa0243940:CDS | 35.0% | |
| !!! | ATACCCTAGTTTTGGATGTT+TGG | - | chr2_2:21729412-21729431 | None:intergenic | 35.0% |
| ! | GAAGCTTAATACCCTAGTTT+TGG | - | chr2_2:21729420-21729439 | None:intergenic | 35.0% |
| ! | AGGGTATTAAGCTTCAAACT+AGG | + | chr2_2:21729425-21729444 | Msa0243940:intron | 35.0% |
| GGGTATTAAGCTTCAAACTA+GGG | + | chr2_2:21729426-21729445 | Msa0243940:intron | 35.0% | |
| ! | ATAGATCAGTTTTCGAACCT+CGG | - | chr2_2:21729547-21729566 | None:intergenic | 35.0% |
| ACCAATTGAGATGTGCTTAA+AGG | + | chr2_2:21729589-21729608 | Msa0243940:intron | 35.0% | |
| TCCTTTAAGCACATCTCAAT+TGG | - | chr2_2:21729593-21729612 | None:intergenic | 35.0% | |
| ATTTCAACACTCATTTCCAC+TGG | + | chr2_2:21729889-21729908 | Msa0243940:CDS | 35.0% | |
| ACAGCAACATTTAACATACC+TGG | + | chr2_2:21729919-21729938 | Msa0243940:CDS | 35.0% | |
| AATCAATCCACATAGCAACT+TGG | - | chr2_2:21730115-21730134 | None:intergenic | 35.0% | |
| ATTTCCATGGTTTGATGTCA+TGG | + | chr2_2:21730196-21730215 | Msa0243940:CDS | 35.0% | |
| TTTCCATGGTTTGATGTCAT+GGG | + | chr2_2:21730197-21730216 | Msa0243940:CDS | 35.0% | |
| TTGCAAGCTTCCTTTGCATT+TGG | + | chr2_2:21723940-21723959 | Msa0243940:five_prime_UTR | 40.0% | |
| TGCAAGCTTCCTTTGCATTT+GGG | + | chr2_2:21723941-21723960 | Msa0243940:five_prime_UTR | 40.0% | |
| !! | CTTCCTTTGCATTTGGGTTT+TGG | + | chr2_2:21723947-21723966 | Msa0243940:five_prime_UTR | 40.0% |
| CTTCCAAAACCCAAATGCAA+AGG | - | chr2_2:21723953-21723972 | None:intergenic | 40.0% | |
| !! | TGTTCTAAGAGAGCTTCTTG+AGG | + | chr2_2:21724028-21724047 | Msa0243940:five_prime_UTR | 40.0% |
| AGCGAGAAAGAACTACAAAG+AGG | - | chr2_2:21724358-21724377 | None:intergenic | 40.0% | |
| AAAGCCAAAACTGCAAACGA+AGG | - | chr2_2:21724388-21724407 | None:intergenic | 40.0% | |
| ! | GGGTGAACAAATGAGGTATT+TGG | + | chr2_2:21724700-21724719 | Msa0243940:intron | 40.0% |
| AAGGGAATATCCCGATCTAA+AGG | + | chr2_2:21725625-21725644 | Msa0243940:intron | 40.0% | |
| CTTGTAATAGGTGAAGGGAA+GGG | - | chr2_2:21725904-21725923 | None:intergenic | 40.0% | |
| TCTTGTAATAGGTGAAGGGA+AGG | - | chr2_2:21725905-21725924 | None:intergenic | 40.0% | |
| !! | CCTTTGTTATTGCAGCGTTT+AGG | - | chr2_2:21726447-21726466 | None:intergenic | 40.0% |
| CCTAAACGCTGCAATAACAA+AGG | + | chr2_2:21726444-21726463 | Msa0243940:CDS | 40.0% | |
| AAAAGCAGCCATAGTAAGAG+GGG | - | chr2_2:21726686-21726705 | None:intergenic | 40.0% | |
| CAGCCATACAGTAGACATAT+TGG | + | chr2_2:21726738-21726757 | Msa0243940:CDS | 40.0% | |
| AGTAGACATATTGGAAGAGG+AGG | + | chr2_2:21726747-21726766 | Msa0243940:CDS | 40.0% | |
| ACATATTGGAAGAGGAGGAA+TGG | + | chr2_2:21726752-21726771 | Msa0243940:CDS | 40.0% | |
| GAATCGAACATGAGATCTTG+AGG | - | chr2_2:21726899-21726918 | None:intergenic | 40.0% | |
| ATCTCATGTTCGATTCTCTC+TGG | + | chr2_2:21726903-21726922 | Msa0243940:intron | 40.0% | |
| !! | TCTCTGGAGTCAATTTAGGT+GGG | + | chr2_2:21726919-21726938 | Msa0243940:intron | 40.0% |
| ! | AGTGAATTTGCAGGTAATGG+AGG | - | chr2_2:21727001-21727020 | None:intergenic | 40.0% |
| AGGAGTGAATTTGCAGGTAA+TGG | - | chr2_2:21727004-21727023 | None:intergenic | 40.0% | |
| AAAACAGTCAACACTGGCAT+TGG | + | chr2_2:21727070-21727089 | Msa0243940:CDS | 40.0% | |
| CGAAATATGAACAAGGAGAC+AGG | + | chr2_2:21727095-21727114 | Msa0243940:CDS | 40.0% | |
| CATAATTCGGCAGTTAACTG+CGG | - | chr2_2:21728005-21728024 | None:intergenic | 40.0% | |
| ! | CTGCAGTCGGTTTCATAATT+CGG | - | chr2_2:21727396-21727415 | None:intergenic | 40.0% |
| GGTGGTTAATTAACTGCAGT+CGG | - | chr2_2:21727409-21727428 | None:intergenic | 40.0% | |
| ACTTCTGCAATTAACTACCG+AGG | + | chr2_2:21727436-21727455 | Msa0243940:intron | 40.0% | |
| TGCTTATAATAGTGACCGGA+GGG | - | chr2_2:21727658-21727677 | None:intergenic | 40.0% | |
| TTGCTTATAATAGTGACCGG+AGG | - | chr2_2:21727659-21727678 | None:intergenic | 40.0% | |
| ACTTCTGCAGTTAACTAACG+AGG | - | chr2_2:21727956-21727975 | None:intergenic | 40.0% | |
| TAACTGCCGAATTATGGAAC+CGG | - | chr2_2:21728001-21728020 | None:intergenic | 40.0% | |
| TGCTGTTGACACATATGCAA+AGG | - | chr2_2:21728065-21728084 | None:intergenic | 40.0% | |
| !!! | ACGGTTGTTTTTAGTAGAGG+TGG | + | chr2_2:21728129-21728148 | Msa0243940:intron | 40.0% |
| !!! | CGGTTGTTTTTAGTAGAGGT+GGG | + | chr2_2:21728130-21728149 | Msa0243940:intron | 40.0% |
| ! | AGCAGTTCGGTTCAGATTTT+TGG | - | chr2_2:21728164-21728183 | None:intergenic | 40.0% |
| ! | ACTTTGTGGCTGAACTTTTG+AGG | + | chr2_2:21728899-21728918 | Msa0243940:CDS | 40.0% |
| ATTAGGTTAAGCTGAGAAGG+AGG | - | chr2_2:21729108-21729127 | None:intergenic | 40.0% | |
| ! | ATGTATGGTGAAATAGTGGG+AGG | - | chr2_2:21729182-21729201 | None:intergenic | 40.0% |
| TAGTAGCTCTTTATGCTCCT+CGG | - | chr2_2:21729821-21729840 | None:intergenic | 40.0% | |
| TGTTGCTGTAAATACTCCAG+TGG | - | chr2_2:21729908-21729927 | None:intergenic | 40.0% | |
| GCAACATTTAACATACCTGG+TGG | + | chr2_2:21729922-21729941 | Msa0243940:CDS | 40.0% | |
| !! | GTATTTTTGTTGAAGCCACC+AGG | - | chr2_2:21729940-21729959 | None:intergenic | 40.0% |
| GGTGGCTTCAACAAAAATAC+AGG | + | chr2_2:21729940-21729959 | Msa0243940:CDS | 40.0% | |
| AATCCACATAGCAACTTGGA+AGG | - | chr2_2:21730111-21730130 | None:intergenic | 40.0% | |
| TGCTATCATCATGCTTGTGA+TGG | - | chr2_2:21730151-21730170 | None:intergenic | 40.0% | |
| CGGATAATATCAGACCAAAG+TGG | - | chr2_2:21730285-21730304 | None:intergenic | 40.0% | |
| ! | TGCTCCTTCGTTTGCAGTTT+TGG | + | chr2_2:21724381-21724400 | Msa0243940:intron | 45.0% |
| TCATGTGCTTGCGATTGTGA+TGG | - | chr2_2:21725842-21725861 | None:intergenic | 45.0% | |
| ATCACAATCGCAAGCACATG+AGG | + | chr2_2:21725841-21725860 | Msa0243940:CDS | 45.0% | |
| GAGGAGTAGGGCATGATAAT+TGG | - | chr2_2:21725871-21725890 | None:intergenic | 45.0% | |
| AGGTGATTGGATTGCATCCA+AGG | + | chr2_2:21726396-21726415 | Msa0243940:CDS | 45.0% | |
| GGTGATTGGATTGCATCCAA+GGG | + | chr2_2:21726397-21726416 | Msa0243940:CDS | 45.0% | |
| GTCTCTATCTATCATGCCCT+TGG | - | chr2_2:21726416-21726435 | None:intergenic | 45.0% | |
| TTGTGCTTAGCTGCTGTATC+TGG | + | chr2_2:21726586-21726605 | Msa0243940:CDS | 45.0% | |
| GGATGTCTACCACATATTCG+AGG | + | chr2_2:21726646-21726665 | Msa0243940:CDS | 45.0% | |
| AGGAATGACCCCTCTTACTA+TGG | + | chr2_2:21726675-21726694 | Msa0243940:CDS | 45.0% | |
| GGTCTCAAGTCAATACCACT+AGG | - | chr2_2:21726861-21726880 | None:intergenic | 45.0% | |
| TCGAACATGAGATCTTGAGG+AGG | - | chr2_2:21726896-21726915 | None:intergenic | 45.0% | |
| !! | CTCTCTGGAGTCAATTTAGG+TGG | + | chr2_2:21726918-21726937 | Msa0243940:intron | 45.0% |
| ACTGCTAGGAGTGAATTTGC+AGG | - | chr2_2:21727010-21727029 | None:intergenic | 45.0% | |
| GGAGACAGGCTTACATATCT+TGG | + | chr2_2:21727109-21727128 | Msa0243940:CDS | 45.0% | |
| CTGCAGTTAATTAACCACCG+AGG | + | chr2_2:21727410-21727429 | Msa0243940:intron | 45.0% | |
| ! | ATTGCAGAAGTTTTCCTCGG+TGG | - | chr2_2:21727427-21727446 | None:intergenic | 45.0% |
| GGCAGTTAACTGCCGAATTA+TGG | - | chr2_2:21728007-21728026 | None:intergenic | 45.0% | |
| TTCGGTTCAGTTCAGCAGTT+CGG | - | chr2_2:21728177-21728196 | None:intergenic | 45.0% | |
| ! | ACTTGGGTTGCACATGGTTT+CGG | - | chr2_2:21728479-21728498 | None:intergenic | 45.0% |
| ! | CTAAGAACTTGGGTTGCACA+TGG | - | chr2_2:21728485-21728504 | None:intergenic | 45.0% |
| ! | GAAGAGCACAAGTCCATTTC+TGG | + | chr2_2:21728759-21728778 | Msa0243940:CDS | 45.0% |
| TGGGGCATACTTCTCAATCA+TGG | + | chr2_2:21728799-21728818 | Msa0243940:CDS | 45.0% | |
| GAAGAGCTGCTCCTGAAATT+AGG | - | chr2_2:21729125-21729144 | None:intergenic | 45.0% | |
| !!! | AGTTTTGGATGTTTGGCCCT+TGG | - | chr2_2:21729405-21729424 | None:intergenic | 45.0% |
| AGGGCCAAACATCCAAAACT+AGG | + | chr2_2:21729405-21729424 | Msa0243940:intron | 45.0% | |
| GGGCCAAACATCCAAAACTA+GGG | + | chr2_2:21729406-21729425 | Msa0243940:intron | 45.0% | |
| ! | CATCTCAATTGGTAGCTGCA+AGG | - | chr2_2:21729582-21729601 | None:intergenic | 45.0% |
| ! | GACCTCTAAACAAGTTGAGC+CGG | + | chr2_2:21729688-21729707 | Msa0243940:intron | 45.0% |
| CTCGGCAAATATCTCATCTG+GGG | - | chr2_2:21729803-21729822 | None:intergenic | 45.0% | |
| CCTCGGCAAATATCTCATCT+GGG | - | chr2_2:21729804-21729823 | None:intergenic | 45.0% | |
| TCCTCGGCAAATATCTCATC+TGG | - | chr2_2:21729805-21729824 | None:intergenic | 45.0% | |
| CTTCCTTCCAAGTTGCTATG+TGG | + | chr2_2:21730105-21730124 | Msa0243940:CDS | 45.0% | |
| GAACCCATGACATCAAACCA+TGG | - | chr2_2:21730203-21730222 | None:intergenic | 45.0% | |
| !! | ATATTAATAATAACAATTTA+TGG | - | chr2_2:21727491-21727510 | None:intergenic | 5.0% |
| !!! | TTTTTTATATTTTTTTTCAA+AGG | + | chr2_2:21728341-21728360 | Msa0243940:intron | 5.0% |
| !!! | AATAATTTAAGATAATATAT+AGG | + | chr2_2:21729286-21729305 | Msa0243940:intron | 5.0% |
| !! | GGTGTCGATGTTGAGGAGTA+GGG | - | chr2_2:21725883-21725902 | None:intergenic | 50.0% |
| CCTTGAGCACCTCGAATATG+TGG | - | chr2_2:21726658-21726677 | None:intergenic | 50.0% | |
| ! | CCACATATTCGAGGTGCTCA+AGG | + | chr2_2:21726655-21726674 | Msa0243940:CDS | 50.0% |
| TTGAGGAGGAGCAAACTCTC+AGG | - | chr2_2:21726882-21726901 | None:intergenic | 50.0% | |
| ATTCGGCAGTTAACTGCGGA+GGG | - | chr2_2:21727379-21727398 | None:intergenic | 50.0% | |
| AATTCGGCAGTTAACTGCGG+AGG | - | chr2_2:21727380-21727399 | None:intergenic | 50.0% | |
| ! | CTGCAGCCGGTTCCATAATT+CGG | + | chr2_2:21727992-21728011 | Msa0243940:intron | 50.0% |
| AATTCGGCAGTTAACTGCCG+AGG | + | chr2_2:21728008-21728027 | Msa0243940:intron | 50.0% | |
| ATTCGGCAGTTAACTGCCGA+GGG | + | chr2_2:21728009-21728028 | Msa0243940:intron | 50.0% | |
| GTTGCACATGGTTTCGGTTC+GGG | - | chr2_2:21728473-21728492 | None:intergenic | 50.0% | |
| GGTTGCACATGGTTTCGGTT+CGG | - | chr2_2:21728474-21728493 | None:intergenic | 50.0% | |
| GTGTAAGCATTAATCGGGGC+TGG | + | chr2_2:21729378-21729397 | Msa0243940:intron | 50.0% | |
| !! | ATTAATCGGGGCTGGTCCAA+GGG | + | chr2_2:21729386-21729405 | Msa0243940:intron | 50.0% |
| ! | GACCGGCTCAACTTGTTTAG+AGG | - | chr2_2:21729693-21729712 | None:intergenic | 50.0% |
| CCCAGATGAGATATTTGCCG+AGG | + | chr2_2:21729801-21729820 | Msa0243940:CDS | 50.0% | |
| !! | GGGTGTCGATGTTGAGGAGT+AGG | - | chr2_2:21725884-21725903 | None:intergenic | 55.0% |
| !! | AGGGAAGGGTGTCGATGTTG+AGG | - | chr2_2:21725890-21725909 | None:intergenic | 55.0% |
| ACCACTAGGCCAACCCAAGT+GGG | - | chr2_2:21726847-21726866 | None:intergenic | 55.0% | |
| TACCACTAGGCCAACCCAAG+TGG | - | chr2_2:21726848-21726867 | None:intergenic | 55.0% | |
| TTCGGCAGTTAACTGCGGAG+GGG | - | chr2_2:21727378-21727397 | None:intergenic | 55.0% | |
| CCTCGGTAGTTAACTGCAGC+CGG | + | chr2_2:21727979-21727998 | Msa0243940:intron | 55.0% | |
| TTCGGCAGTTAACTGCCGAG+GGG | + | chr2_2:21728010-21728029 | Msa0243940:intron | 55.0% | |
| !! | CATTAATCGGGGCTGGTCCA+AGG | + | chr2_2:21729385-21729404 | Msa0243940:intron | 55.0% |
| GTGGAGAAGTGATGAGTCCG+AGG | + | chr2_2:21729527-21729546 | Msa0243940:intron | 55.0% | |
| !! | ACCCACTTGGGTTGGCCTAG+TGG | + | chr2_2:21726843-21726862 | Msa0243940:intron | 60.0% |
| CCGGCTGCAGTTAACTACCG+AGG | - | chr2_2:21727982-21728001 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2_2 | gene | 21723935 | 21730440 | 21723935 | ID=Msa0243940;Name=Msa0243940 |
| chr2_2 | mRNA | 21723935 | 21730440 | 21723935 | ID=Msa0243940-mRNA-1;Parent=Msa0243940;Name=Msa0243940-mRNA-1;_AED=0.13;_eAED=0.13;_QI=119|1|1|1|0.8|0.66|6|81|576 |
| chr2_2 | exon | 21723935 | 21724049 | 21723935 | ID=Msa0243940-mRNA-1:exon:8516;Parent=Msa0243940-mRNA-1 |
| chr2_2 | exon | 21725802 | 21725929 | 21725802 | ID=Msa0243940-mRNA-1:exon:8517;Parent=Msa0243940-mRNA-1 |
| chr2_2 | exon | 21726350 | 21726814 | 21726350 | ID=Msa0243940-mRNA-1:exon:8518;Parent=Msa0243940-mRNA-1 |
| chr2_2 | exon | 21727048 | 21727152 | 21727048 | ID=Msa0243940-mRNA-1:exon:8519;Parent=Msa0243940-mRNA-1 |
| chr2_2 | exon | 21728755 | 21729173 | 21728755 | ID=Msa0243940-mRNA-1:exon:8520;Parent=Msa0243940-mRNA-1 |
| chr2_2 | exon | 21729742 | 21730440 | 21729742 | ID=Msa0243940-mRNA-1:exon:8521;Parent=Msa0243940-mRNA-1 |
| chr2_2 | five_prime_UTR | 21723935 | 21724049 | 21723935 | ID=Msa0243940-mRNA-1:five_prime_utr;Parent=Msa0243940-mRNA-1 |
| chr2_2 | five_prime_UTR | 21725802 | 21725805 | 21725802 | ID=Msa0243940-mRNA-1:five_prime_utr;Parent=Msa0243940-mRNA-1 |
| chr2_2 | CDS | 21725806 | 21725929 | 21725806 | ID=Msa0243940-mRNA-1:cds;Parent=Msa0243940-mRNA-1 |
| chr2_2 | CDS | 21726350 | 21726814 | 21726350 | ID=Msa0243940-mRNA-1:cds;Parent=Msa0243940-mRNA-1 |
| chr2_2 | CDS | 21727048 | 21727152 | 21727048 | ID=Msa0243940-mRNA-1:cds;Parent=Msa0243940-mRNA-1 |
| chr2_2 | CDS | 21728755 | 21729173 | 21728755 | ID=Msa0243940-mRNA-1:cds;Parent=Msa0243940-mRNA-1 |
| chr2_2 | CDS | 21729742 | 21730359 | 21729742 | ID=Msa0243940-mRNA-1:cds;Parent=Msa0243940-mRNA-1 |
| chr2_2 | three_prime_UTR | 21730360 | 21730440 | 21730360 | ID=Msa0243940-mRNA-1:three_prime_utr;Parent=Msa0243940-mRNA-1 |
| Gene Sequence |
| Protein sequence |
