Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926950 | KEH27158.1 | 42.276 | 246 | 64 | 3 | 1 | 220 | 1 | 194 | 2.07e-44 | 160 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0926950 | Msa1228210 | 0.802136 | 6.472290e-49 | -8.615850e-47 |
| Msa0926950 | Msa1271280 | 0.800483 | 1.410889e-48 | -8.615850e-47 |
| Msa0926950 | Msa1283860 | 0.802214 | 6.238149e-49 | -8.615850e-47 |
| Msa0926950 | Msa1410640 | 0.822770 | 1.982692e-53 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0926950 | MtrunA17_Chr6g0486181 | 42.276 | 246 | 64 | 3 | 1 | 220 | 1 | 194 | 1.90e-48 | 160 |
| Msa0926950 | MtrunA17_Chr6g0486151 | 32.432 | 222 | 106 | 10 | 13 | 220 | 22 | 213 | 5.78e-13 | 66.6 |
| Msa0926950 | MtrunA17_Chr6g0486141 | 43.023 | 86 | 47 | 2 | 137 | 220 | 110 | 195 | 5.82e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 37 sgRNAs with CRISPR-Local
Find 449 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAAGTCGCGGATTCTTTA+AGG | 0.149783 | 6_2:-71026388 | Msa0926950:CDS |
| AAATAATATGTTATTTGATA+TGG | 0.194576 | 6_2:+71026188 | None:intergenic |
| TATATCTGCTATCAATAAAA+TGG | 0.255177 | 6_2:+71033066 | None:intergenic |
| AGTGGAAATAAAATAGATAT+TGG | 0.266231 | 6_2:-71026234 | Msa0926950:CDS |
| GATATTAAGGACAAGAGTTT+AGG | 0.308639 | 6_2:-71026643 | Msa0926950:intron |
| AATAGATATTGGACTTTCAA+TGG | 0.360085 | 6_2:-71026223 | Msa0926950:CDS |
| TTCTTTCATGGAGGAGGAAG+GGG | 0.389696 | 6_2:-71026354 | Msa0926950:CDS |
| AAAGAATCCGCGACTTTCAT+AGG | 0.395410 | 6_2:+71026392 | None:intergenic |
| ATGTTGGATGTGGGGACAGC+GGG | 0.422056 | 6_2:-71033178 | Msa0926950:CDS |
| GATAGAGATGGTAGCGTTCA+AGG | 0.422815 | 6_2:-71033098 | Msa0926950:CDS |
| GAGGATAAGGATAAGAATGT+TGG | 0.425693 | 6_2:-71033194 | Msa0926950:CDS |
| TGTGCCACAGTAACTTTGTA+AGG | 0.430676 | 6_2:+71026288 | None:intergenic |
| TCTATCAAATACTCTAGTTA+AGG | 0.433105 | 6_2:+71026559 | None:intergenic |
| AGGATAAGAATGTTGGATGT+GGG | 0.439944 | 6_2:-71033187 | Msa0926950:CDS |
| CAGAATCATGCTCATTGAAC+AGG | 0.443890 | 6_2:+71026150 | None:intergenic |
| GATAGAGTATTTGATAGAGA+TGG | 0.446222 | 6_2:-71033110 | Msa0926950:CDS |
| AGCTAAAGCTGAAAATGATC+TGG | 0.457923 | 6_2:-71026463 | Msa0926950:CDS |
| AAGGATAAGAATGTTGGATG+TGG | 0.482438 | 6_2:-71033188 | Msa0926950:CDS |
| GATAGAGATGGTAGCACTCA+AGG | 0.505801 | 6_2:-71026542 | Msa0926950:intron |
| ATATTATTTGTTTCAGCGGA+GGG | 0.515871 | 6_2:-71026174 | Msa0926950:CDS |
| ACTAGAGTATTTGATAGAGA+TGG | 0.527025 | 6_2:-71026554 | Msa0926950:CDS |
| TAACATATTATTTGTTTCAG+CGG | 0.536777 | 6_2:-71026178 | Msa0926950:CDS |
| TTTCTTTCATGGAGGAGGAA+GGG | 0.543712 | 6_2:-71026355 | Msa0926950:CDS |
| GAAGTGAAATACATCATTGA+CGG | 0.544553 | 6_2:-71033155 | Msa0926950:CDS |
| AGTAATGGGAGTGTAATAGT+TGG | 0.554299 | 6_2:-71033248 | Msa0926950:CDS |
| CATATTATTTGTTTCAGCGG+AGG | 0.560909 | 6_2:-71026175 | Msa0926950:CDS |
| GAAGTGAAATACATCATTGA+CGG | 0.562598 | 6_2:-71026599 | Msa0926950:CDS |
| GGACAAGAGTTTAGGAAAGA+CGG | 0.564396 | 6_2:-71026635 | Msa0926950:CDS |
| AAGTGAAATACATCATTGAC+GGG | 0.570863 | 6_2:-71026598 | Msa0926950:CDS |
| AAGTGAAATACATCATTGAC+GGG | 0.581638 | 6_2:-71033154 | Msa0926950:CDS |
| GGATAAGAATGTTGGATGTG+GGG | 0.606806 | 6_2:-71033186 | Msa0926950:CDS |
| AATGTTGGATGTGGGGACAG+CGG | 0.610119 | 6_2:-71033179 | Msa0926950:CDS |
| TAGGTCACGTTATCAGAAAG+CGG | 0.661044 | 6_2:+71026411 | None:intergenic |
| TGTTGGATGTGGGGACAGCG+GGG | 0.673044 | 6_2:-71033177 | Msa0926950:CDS |
| GAATCCTTACAAAGTTACTG+TGG | 0.689365 | 6_2:-71026292 | Msa0926950:CDS |
| GAACAGAATAGCATGCAGAG+AGG | 0.743502 | 6_2:-71026318 | Msa0926950:CDS |
| AACGTGACCTATGAAAGTCG+CGG | 0.766478 | 6_2:-71026399 | Msa0926950:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AATTTATTAACTTTTTTCAA+AGG | - | chr6_2:71026981-71027000 | Msa0926950:intron | 10.0% |
| !! | AAAAAATTCATCTATTTATT+GGG | - | chr6_2:71027610-71027629 | Msa0926950:intron | 10.0% |
| !!! | TATTAAATATGATTTCTTTT+TGG | - | chr6_2:71028126-71028145 | Msa0926950:intron | 10.0% |
| !!! | TGAATTTAATTAATTTTTCT+GGG | + | chr6_2:71031164-71031183 | None:intergenic | 10.0% |
| !!! | ATGAATTTAATTAATTTTTC+TGG | + | chr6_2:71031163-71031182 | None:intergenic | 10.0% |
| !!! | ATGAATTTAATTAATTTTTC+TGG | - | chr6_2:71031163-71031182 | Msa0926950:intron | 10.0% |
| !!! | TGAATTTAATTAATTTTTCT+GGG | - | chr6_2:71031164-71031183 | Msa0926950:intron | 10.0% |
| !!! | AAATAATATGTTATTTGATA+TGG | + | chr6_2:71033242-71033261 | None:intergenic | 10.0% |
| !!! | TTTTGTATATATCATTCAAT+AGG | + | chr6_2:71027573-71027592 | None:intergenic | 15.0% |
| !! | GAAAAAATTCATCTATTTAT+TGG | - | chr6_2:71027609-71027628 | Msa0926950:intron | 15.0% |
| !!! | GATATTTTCTTATTTTTCTA+AGG | + | chr6_2:71028748-71028767 | None:intergenic | 15.0% |
| !! | ATAACGACAATAATTAATTA+AGG | - | chr6_2:71028800-71028819 | Msa0926950:intron | 15.0% |
| !! | TAACGACAATAATTAATTAA+GGG | - | chr6_2:71028801-71028820 | Msa0926950:intron | 15.0% |
| !!! | TTAAAATTTGTTTCATAAAG+TGG | - | chr6_2:71029698-71029717 | Msa0926950:intron | 15.0% |
| !! | CAAAAGATTATTATTTACAT+GGG | + | chr6_2:71029998-71030017 | Msa0926960:CDS | 15.0% |
| !! | TCAAAAGATTATTATTTACA+TGG | + | chr6_2:71029999-71030018 | Msa0926960:CDS | 15.0% |
| !!! | TTTTGACTTAATTAATTCTT+TGG | - | chr6_2:71030013-71030032 | Msa0926950:intron | 15.0% |
| !! | TAAATCCAAAAATAAGTTAA+GGG | + | chr6_2:71031354-71031373 | None:intergenic | 15.0% |
| !! | TTAAATCCAAAAATAAGTTA+AGG | + | chr6_2:71031353-71031372 | None:intergenic | 15.0% |
| !!! | CTTATTTTTGGATTTAAATT+TGG | - | chr6_2:71030044-71030063 | Msa0926950:intron | 15.0% |
| !!! | CTTATTTTTGGATTTAAATT+TGG | + | chr6_2:71030044-71030063 | Msa0926960:CDS | 15.0% |
| !! | TTAAATCCAAAAATAAGTTA+AGG | - | chr6_2:71031353-71031372 | Msa0926950:intron | 15.0% |
| !! | TAAATCCAAAAATAAGTTAA+GGG | - | chr6_2:71031354-71031373 | Msa0926950:intron | 15.0% |
| !!! | TTAGATACCAAATTTTTTTA+TGG | + | chr6_2:71031763-71031782 | None:intergenic | 15.0% |
| !! | TTACAGGATATAATTAATAA+TGG | - | chr6_2:71032118-71032137 | Msa0926950:intron | 15.0% |
| !!! | GAAATAGTTTTCTTAGTAAT+GGG | - | chr6_2:71026165-71026184 | Msa0926950:CDS | 20.0% |
| !! | TATATCTGCTATCAATAAAA+TGG | + | chr6_2:71026364-71026383 | None:intergenic | 20.0% |
| !! | AAACATCTAAAAAAAGTTTG+AGG | - | chr6_2:71026510-71026529 | Msa0926950:intron | 20.0% |
| !!! | AAAGATGAAATTTTGTTATG+AGG | + | chr6_2:71026643-71026662 | None:intergenic | 20.0% |
| !! | TTAAAAAAGTTGTTGTAAGA+TGG | - | chr6_2:71027077-71027096 | Msa0926950:intron | 20.0% |
| !!! | AAACTAAAGCAATTTTTAGT+CGG | + | chr6_2:71027216-71027235 | None:intergenic | 20.0% |
| !!! | TTTAGTTTAGATTTCAAAGT+TGG | - | chr6_2:71027228-71027247 | Msa0926950:intron | 20.0% |
| !! | TTAGTTTAGATTTCAAAGTT+GGG | - | chr6_2:71027229-71027248 | Msa0926950:intron | 20.0% |
| !! | TTCCTTAAAATATTCTTGAA+AGG | + | chr6_2:71027327-71027346 | None:intergenic | 20.0% |
| !!! | CTAATCTTGACAATTTTTTT+GGG | + | chr6_2:71028059-71028078 | None:intergenic | 20.0% |
| !!! | TCTAATCTTGACAATTTTTT+TGG | + | chr6_2:71028060-71028079 | None:intergenic | 20.0% |
| !! | ATTATGAAGAAAATTTCTCT+TGG | - | chr6_2:71028312-71028331 | Msa0926950:intron | 20.0% |
| !! | AACTTCTGATCATTATAAAA+AGG | + | chr6_2:71028381-71028400 | None:intergenic | 20.0% |
| !!! | AAGAAAATATCAATTTTGCA+AGG | - | chr6_2:71028757-71028776 | Msa0926950:intron | 20.0% |
| !!! | AATGTGTCTTGTTTAATTTT+GGG | + | chr6_2:71028844-71028863 | None:intergenic | 20.0% |
| !!! | AAATGTGTCTTGTTTAATTT+TGG | + | chr6_2:71028845-71028864 | None:intergenic | 20.0% |
| !!! | CTGAGTAATAAAATTGTTTT+AGG | + | chr6_2:71029130-71029149 | None:intergenic | 20.0% |
| !!! | TGTCCATATTTAGTTTTAAA+GGG | + | chr6_2:71029154-71029173 | None:intergenic | 20.0% |
| !!! | ATGTCCATATTTAGTTTTAA+AGG | + | chr6_2:71029155-71029174 | None:intergenic | 20.0% |
| !! | TATAACGAAGAATGTAAATA+CGG | - | chr6_2:71029772-71029791 | Msa0926950:intron | 20.0% |
| !!! | TTAATTAATTTTTCTGGGTT+AGG | + | chr6_2:71031169-71031188 | None:intergenic | 20.0% |
| !!! | GTTATTAGATCTATTTTTCT+GGG | + | chr6_2:71030419-71030438 | None:intergenic | 20.0% |
| !!! | AGTTATTAGATCTATTTTTC+TGG | + | chr6_2:71030420-71030439 | None:intergenic | 20.0% |
| !!! | ATAAGTTTTAGAAAAAATGG+TGG | + | chr6_2:71030532-71030551 | None:intergenic | 20.0% |
| !!! | CAGATAAGTTTTAGAAAAAA+TGG | + | chr6_2:71030535-71030554 | None:intergenic | 20.0% |
| !! | AAGATAAAAAAAGAAATTGG+AGG | + | chr6_2:71030784-71030803 | None:intergenic | 20.0% |
| !!! | CAATTTCTTTTTTTATCTTC+CGG | - | chr6_2:71030785-71030804 | Msa0926950:intron | 20.0% |
| !! | TTTGTATGAAATAATCATGA+TGG | - | chr6_2:71031075-71031094 | Msa0926950:intron | 20.0% |
| !!! | TTAATTAATTTTTCTGGGTT+AGG | - | chr6_2:71031169-71031188 | Msa0926950:intron | 20.0% |
| !! | AACTTTAAATTGTCTCAATT+TGG | + | chr6_2:71031321-71031340 | None:intergenic | 20.0% |
| !!! | AATTGAGACAATTTAAAGTT+AGG | - | chr6_2:71031321-71031340 | Msa0926950:intron | 20.0% |
| !!! | ATTGAGACAATTTAAAGTTA+GGG | - | chr6_2:71031322-71031341 | Msa0926950:intron | 20.0% |
| !! | ATTAGGCTTAATTAATCATT+TGG | + | chr6_2:71031381-71031400 | None:intergenic | 20.0% |
| !! | ATTCCATCCATAAAAAAATT+TGG | - | chr6_2:71031753-71031772 | Msa0926950:intron | 20.0% |
| !!! | ATACCAAATTTTTTTATGGA+TGG | + | chr6_2:71031759-71031778 | None:intergenic | 20.0% |
| !! | ATTATTTCAACTCACTAATA+TGG | + | chr6_2:71031937-71031956 | None:intergenic | 20.0% |
| !!! | CATTTTTACCCAAAATATTA+AGG | - | chr6_2:71031966-71031985 | Msa0926950:intron | 20.0% |
| !!! | GCATTTATTTTTTTTTACAG+TGG | - | chr6_2:71032349-71032368 | Msa0926950:intron | 20.0% |
| !!! | TTCTTTTTGAATTTTCCATT+TGG | - | chr6_2:71032542-71032561 | Msa0926950:intron | 20.0% |
| !! | AGTTAGTGTTTAAACATAAA+AGG | - | chr6_2:71032584-71032603 | Msa0926950:intron | 20.0% |
| !!! | AAAAGTATACATAAACATTG+TGG | + | chr6_2:71032618-71032637 | None:intergenic | 20.0% |
| !! | AGTAATAGGAATATAAAACT+TGG | - | chr6_2:71032730-71032749 | Msa0926950:intron | 20.0% |
| !! | ATTCCAAAAAAGAGATATTA+AGG | - | chr6_2:71032771-71032790 | Msa0926950:intron | 20.0% |
| !!! | GAAACAAATTTTTTCTTTCA+TGG | - | chr6_2:71033061-71033080 | Msa0926950:intron | 20.0% |
| !! | AGTGGAAATAAAATAGATAT+TGG | - | chr6_2:71033193-71033212 | Msa0926950:CDS | 20.0% |
| !! | TAACATATTATTTGTTTCAG+CGG | - | chr6_2:71033249-71033268 | Msa0926950:CDS | 20.0% |
| !! | GGAAATAGTTTTCTTAGTAA+TGG | - | chr6_2:71026164-71026183 | Msa0926950:CDS | 25.0% |
| !! | TGCCTTTCAAGAATATTTTA+AGG | - | chr6_2:71027322-71027341 | Msa0926950:intron | 25.0% |
| ! | AACTTAGGAACATGTAATAA+TGG | - | chr6_2:71027437-71027456 | Msa0926950:intron | 25.0% |
| !! | AAAGGATTTGGTATTAATAG+TGG | + | chr6_2:71027489-71027508 | None:intergenic | 25.0% |
| ! | ATGAATCCTGTAAAAAGAAA+AGG | + | chr6_2:71027507-71027526 | None:intergenic | 25.0% |
| ! | CGCTTTCAACATAAAATATT+TGG | - | chr6_2:71027543-71027562 | Msa0926950:intron | 25.0% |
| ! | AACAGTAATTTAACTGTTGT+TGG | - | chr6_2:71027856-71027875 | Msa0926950:intron | 25.0% |
| !!! | TGGAGGTATTTTTGTTAATT+CGG | - | chr6_2:71027876-71027895 | Msa0926950:intron | 25.0% |
| ! | GAATATCCAAAATTTACTGT+TGG | - | chr6_2:71027972-71027991 | Msa0926950:intron | 25.0% |
| !! | TTAGATCCAACAGTAAATTT+TGG | + | chr6_2:71027981-71028000 | None:intergenic | 25.0% |
| !! | TGAATAACTTTTGGACAATA+TGG | + | chr6_2:71028201-71028220 | None:intergenic | 25.0% |
| !! | TAGATGTCTTGAATAACTTT+TGG | + | chr6_2:71028210-71028229 | None:intergenic | 25.0% |
| ! | ATGAACCATGTCAATTTAAA+CGG | - | chr6_2:71028278-71028297 | Msa0926950:intron | 25.0% |
| !! | TTTTCTTCATAATTTTCCGA+AGG | + | chr6_2:71028305-71028324 | None:intergenic | 25.0% |
| ! | TGTCTGATTGTATATTTAAC+AGG | - | chr6_2:71028444-71028463 | Msa0926950:intron | 25.0% |
| !!! | TTCTAATGGGTTTATAAAGA+GGG | + | chr6_2:71028542-71028561 | None:intergenic | 25.0% |
| ! | GTTACGAAATAACTTCTAAT+GGG | + | chr6_2:71028555-71028574 | None:intergenic | 25.0% |
| ! | TGTTACGAAATAACTTCTAA+TGG | + | chr6_2:71028556-71028575 | None:intergenic | 25.0% |
| !!! | TTCTTATTTTTCTAAGGTGT+TGG | + | chr6_2:71028742-71028761 | None:intergenic | 25.0% |
| !!! | AATGAAAAAAGTGTTTTGAG+AGG | + | chr6_2:71028926-71028945 | None:intergenic | 25.0% |
| !!! | AGACCCTTTAAAACTAAATA+TGG | - | chr6_2:71029148-71029167 | Msa0926950:intron | 25.0% |
| ! | TAATAATATGCCAACAAACT+AGG | + | chr6_2:71029178-71029197 | None:intergenic | 25.0% |
| !! | CAATTTGAGATTGAGAATAA+TGG | + | chr6_2:71029312-71029331 | None:intergenic | 25.0% |
| ! | TACAGTGTTAAACAATGATT+TGG | + | chr6_2:71029463-71029482 | Msa0926960:CDS | 25.0% |
| !!! | TTTTTAGTCGAAAAAAAGTG+AGG | + | chr6_2:71029511-71029530 | Msa0926960:CDS | 25.0% |
| ! | ATTTGTTTCATAAAGTGGAT+CGG | - | chr6_2:71029703-71029722 | Msa0926950:intron | 25.0% |
| !! | GACTTAAATTTCGTTTTCTA+CGG | + | chr6_2:71029809-71029828 | Msa0926960:CDS | 25.0% |
| !! | TTGATAATATATCACGAAGA+TGG | + | chr6_2:71029842-71029861 | Msa0926960:CDS | 25.0% |
| !! | ATTGAGACAGTTTAAAGTTA+GGG | + | chr6_2:71030072-71030091 | Msa0926960:CDS | 25.0% |
| !! | AATTGAGACAGTTTAAAGTT+AGG | + | chr6_2:71030073-71030092 | Msa0926960:CDS | 25.0% |
| ! | AACTTTAAACTGTCTCAATT+TGG | - | chr6_2:71030073-71030092 | Msa0926950:intron | 25.0% |
| ! | TTGAACAAAAATTAACGGAA+GGG | + | chr6_2:71031262-71031281 | None:intergenic | 25.0% |
| ! | TTTGAACAAAAATTAACGGA+AGG | + | chr6_2:71031261-71031280 | None:intergenic | 25.0% |
| !!! | CGGTTTTGAACAAAAATTAA+CGG | + | chr6_2:71031257-71031276 | None:intergenic | 25.0% |
| !! | ATGAAGATGATGAATTTTCT+GGG | + | chr6_2:71031194-71031213 | None:intergenic | 25.0% |
| !! | TATGAAGATGATGAATTTTC+TGG | + | chr6_2:71031193-71031212 | None:intergenic | 25.0% |
| !!! | TTTTAGAAAAAATGGTGGAA+TGG | + | chr6_2:71030527-71030546 | None:intergenic | 25.0% |
| ! | CAAATCAAATTGTGAAACTA+AGG | - | chr6_2:71030629-71030648 | Msa0926950:intron | 25.0% |
| !! | AAATTGTGAAACTAAGGTTT+TGG | - | chr6_2:71030635-71030654 | Msa0926950:intron | 25.0% |
| ! | CGGAAGATAAAAAAAGAAAT+TGG | + | chr6_2:71030787-71030806 | None:intergenic | 25.0% |
| !!! | TTGAATGAAAAGTTTGCTTT+TGG | - | chr6_2:71030908-71030927 | Msa0926950:intron | 25.0% |
| !!! | TGAATGAAAAGTTTGCTTTT+GGG | - | chr6_2:71030909-71030928 | Msa0926950:intron | 25.0% |
| ! | GTAAAAGATGAAGAATTGAA+AGG | - | chr6_2:71030979-71030998 | Msa0926950:intron | 25.0% |
| !!! | TCAGCTTGTTTGTAATATTT+TGG | - | chr6_2:71031102-71031121 | Msa0926950:intron | 25.0% |
| !!! | CAGCTTGTTTGTAATATTTT+GGG | - | chr6_2:71031103-71031122 | Msa0926950:intron | 25.0% |
| !! | TATGAAGATGATGAATTTTC+TGG | - | chr6_2:71031193-71031212 | Msa0926950:intron | 25.0% |
| !! | ATGAAGATGATGAATTTTCT+GGG | - | chr6_2:71031194-71031213 | Msa0926950:intron | 25.0% |
| !!! | CGGTTTTGAACAAAAATTAA+CGG | - | chr6_2:71031257-71031276 | Msa0926950:intron | 25.0% |
| ! | TTTGAACAAAAATTAACGGA+AGG | - | chr6_2:71031261-71031280 | Msa0926950:intron | 25.0% |
| ! | TTGAACAAAAATTAACGGAA+GGG | - | chr6_2:71031262-71031281 | Msa0926950:intron | 25.0% |
| !! | TTGAGACAATTTAAAGTTAG+GGG | - | chr6_2:71031323-71031342 | Msa0926950:intron | 25.0% |
| ! | ATTGTTCTTGTGAAAAGATT+AGG | + | chr6_2:71031398-71031417 | None:intergenic | 25.0% |
| ! | TTGCTCTTTCAACTAAATTA+TGG | - | chr6_2:71031854-71031873 | Msa0926950:intron | 25.0% |
| ! | ACTAAATTATGGTATCTTGT+TGG | - | chr6_2:71031865-71031884 | Msa0926950:intron | 25.0% |
| ! | ACTAGAATAATGATGAAGAA+AGG | - | chr6_2:71032035-71032054 | Msa0926950:intron | 25.0% |
| ! | AGATGCTGTTATTATTATTG+CGG | - | chr6_2:71032378-71032397 | Msa0926950:intron | 25.0% |
| ! | GGAAAATTCAAAAAGAAACA+TGG | + | chr6_2:71032539-71032558 | None:intergenic | 25.0% |
| ! | ATACTAAAAAACACCTACAT+CGG | + | chr6_2:71032657-71032676 | None:intergenic | 25.0% |
| !!! | GAAATAGTTTTGCTAGTAAT+AGG | - | chr6_2:71032716-71032735 | Msa0926950:intron | 25.0% |
| !!! | ATCTCTTTTTTGGAATTTCA+TGG | + | chr6_2:71032767-71032786 | None:intergenic | 25.0% |
| !!! | TGTCCTTAATATCTCTTTTT+TGG | + | chr6_2:71032777-71032796 | None:intergenic | 25.0% |
| ! | TCTATCAAATACTCTAGTTA+AGG | + | chr6_2:71032871-71032890 | None:intergenic | 25.0% |
| ! | TATATCTGCTATCATTGAAA+TGG | + | chr6_2:71032920-71032939 | None:intergenic | 25.0% |
| !!! | ACAAATTTTTTCTTTCATGG+AGG | - | chr6_2:71033064-71033083 | Msa0926950:CDS | 25.0% |
| !! | CCACTAAAATCATTTTCATT+GGG | + | chr6_2:71033178-71033197 | None:intergenic | 25.0% |
| !! | TCCACTAAAATCATTTTCAT+TGG | + | chr6_2:71033179-71033198 | None:intergenic | 25.0% |
| ! | AATAGATATTGGACTTTCAA+TGG | - | chr6_2:71033204-71033223 | Msa0926950:CDS | 25.0% |
| !!! | TATCCTTATCCTCTCTTTTT+TGG | + | chr6_2:71026226-71026245 | None:intergenic | 30.0% |
| GAAGTGAAATACATCATTGA+CGG | - | chr6_2:71026272-71026291 | Msa0926950:CDS | 30.0% | |
| AAGTGAAATACATCATTGAC+GGG | - | chr6_2:71026273-71026292 | Msa0926950:CDS | 30.0% | |
| ! | GATAGAGTATTTGATAGAGA+TGG | - | chr6_2:71026317-71026336 | Msa0926950:CDS | 30.0% |
| AAACATTTCAGCTATGCATA+GGG | + | chr6_2:71026484-71026503 | None:intergenic | 30.0% | |
| CATCTAAAAAAAGTTTGAGG+AGG | - | chr6_2:71026513-71026532 | Msa0926950:intron | 30.0% | |
| TCTGCAGTAATCAAATTAAG+AGG | - | chr6_2:71026605-71026624 | Msa0926950:CDS | 30.0% | |
| !! | GAAATTTTGTTATGAGGACT+TGG | + | chr6_2:71026637-71026656 | None:intergenic | 30.0% |
| ! | TTAGATGACTTGATGATTAC+AGG | - | chr6_2:71026728-71026747 | Msa0926950:intron | 30.0% |
| AGATTTCAACAGTATGAGAA+TGG | - | chr6_2:71026828-71026847 | Msa0926950:intron | 30.0% | |
| ! | AATGGTTAATGTCTTTTGGT+AGG | + | chr6_2:71027256-71027275 | None:intergenic | 30.0% |
| ! | CTCTAATGGTTAATGTCTTT+TGG | + | chr6_2:71027260-71027279 | None:intergenic | 30.0% |
| GAACAATTGTTACACTCTAA+TGG | + | chr6_2:71027274-71027293 | None:intergenic | 30.0% | |
| TATCTACTTTGAATGCTCAA+AGG | - | chr6_2:71027413-71027432 | Msa0926950:intron | 30.0% | |
| ! | TAGGAACATGTAATAATGGA+TGG | - | chr6_2:71027441-71027460 | Msa0926950:intron | 30.0% |
| CCTGTAAAAAGAAAAGGATT+TGG | + | chr6_2:71027501-71027520 | None:intergenic | 30.0% | |
| ! | CCAAATCCTTTTCTTTTTAC+AGG | - | chr6_2:71027498-71027517 | Msa0926950:intron | 30.0% |
| TCTCTACTATGAAATCCAAT+GGG | + | chr6_2:71027647-71027666 | None:intergenic | 30.0% | |
| TTCTCTACTATGAAATCCAA+TGG | + | chr6_2:71027648-71027667 | None:intergenic | 30.0% | |
| ! | TGGGTAATTGTTTGTTAAGA+TGG | - | chr6_2:71027765-71027784 | Msa0926950:intron | 30.0% |
| ! | GGGTAATTGTTTGTTAAGAT+GGG | - | chr6_2:71027766-71027785 | Msa0926950:intron | 30.0% |
| AGTAATTTAACTGTTGTTGG+AGG | - | chr6_2:71027859-71027878 | Msa0926950:intron | 30.0% | |
| ! | AGGACAATTTCAGTATTTTG+AGG | + | chr6_2:71028361-71028380 | None:intergenic | 30.0% |
| TCTCATTTGTATGTAACCTT+GGG | + | chr6_2:71028498-71028517 | None:intergenic | 30.0% | |
| TTCTCATTTGTATGTAACCT+TGG | + | chr6_2:71028499-71028518 | None:intergenic | 30.0% | |
| ACAAATGAGAAGTTATGTTC+AGG | - | chr6_2:71028508-71028527 | Msa0926950:intron | 30.0% | |
| !! | CTTCTAATGGGTTTATAAAG+AGG | + | chr6_2:71028543-71028562 | None:intergenic | 30.0% |
| TACCCAACACAAAAGTTAAA+CGG | - | chr6_2:71028609-71028628 | Msa0926950:intron | 30.0% | |
| !! | TACCGTTTAACTTTTGTGTT+GGG | + | chr6_2:71028614-71028633 | None:intergenic | 30.0% |
| GGCATTTAAACATGTTTAGT+CGG | + | chr6_2:71029109-71029128 | None:intergenic | 30.0% | |
| GTGACTATAGGAGATTATAA+TGG | + | chr6_2:71029234-71029253 | None:intergenic | 30.0% | |
| GGAAATAGTATTTCCAATCA+AGG | + | chr6_2:71029258-71029277 | None:intergenic | 30.0% | |
| ATAATGGTGAAGAAATGGAA+CGG | + | chr6_2:71029296-71029315 | None:intergenic | 30.0% | |
| TGAGAATAATGGTGAAGAAA+TGG | + | chr6_2:71029301-71029320 | None:intergenic | 30.0% | |
| ! | AAGTATCTAGAACATGGATT+TGG | + | chr6_2:71029380-71029399 | None:intergenic | 30.0% |
| ! | TTCAACAAGTATCTAGAACA+TGG | + | chr6_2:71029386-71029405 | None:intergenic | 30.0% |
| ACCATGGAGATAAAAATGAT+GGG | + | chr6_2:71029628-71029647 | Msa0926960:CDS | 30.0% | |
| TACCATGGAGATAAAAATGA+TGG | + | chr6_2:71029629-71029648 | Msa0926960:CDS | 30.0% | |
| TAATGAGACTAAGAACCATT+GGG | + | chr6_2:71029678-71029697 | Msa0926960:CDS | 30.0% | |
| ATAATGAGACTAAGAACCAT+TGG | + | chr6_2:71029679-71029698 | Msa0926960:CDS | 30.0% | |
| !! | TTGGTCCCTTAACTTATTTT+TGG | - | chr6_2:71030032-71030051 | Msa0926950:intron | 30.0% |
| ! | TTGAGACAGTTTAAAGTTAG+GGG | + | chr6_2:71030071-71030090 | Msa0926960:CDS | 30.0% |
| !! | TTTAAGGATGAAGTTGATGA+AGG | + | chr6_2:71031217-71031236 | None:intergenic | 30.0% |
| ! | TGATGAATTTTCTGGGTTTA+AGG | + | chr6_2:71031201-71031220 | None:intergenic | 30.0% |
| ! | TGTTGTTGTTGATGAATTTG+TGG | + | chr6_2:71030395-71030414 | None:intergenic | 30.0% |
| GTAGAAGAAGAAGAAGAAAA+CGG | + | chr6_2:71030480-71030499 | None:intergenic | 30.0% | |
| !!! | TGAAACTAAGGTTTTGGTTT+TGG | - | chr6_2:71030641-71030660 | Msa0926950:intron | 30.0% |
| !!! | TAAGGTTTTGGTTTTGGATT+TGG | - | chr6_2:71030647-71030666 | Msa0926950:intron | 30.0% |
| !!! | TTTGGTTTTGGATTTGGATT+TGG | - | chr6_2:71030653-71030672 | Msa0926950:intron | 30.0% |
| ATTGAATTGCTGAATTCGAA+GGG | - | chr6_2:71030728-71030747 | Msa0926950:intron | 30.0% | |
| AAAAAAGAAATTGGAGGAAG+AGG | + | chr6_2:71030778-71030797 | None:intergenic | 30.0% | |
| AATTGAACGAAGAATTACGA+AGG | + | chr6_2:71030889-71030908 | None:intergenic | 30.0% | |
| ! | TGATGAATTTTCTGGGTTTA+AGG | - | chr6_2:71031201-71031220 | Msa0926950:intron | 30.0% |
| !! | TTTAAGGATGAAGTTGATGA+AGG | - | chr6_2:71031217-71031236 | Msa0926950:intron | 30.0% |
| !! | TTGGTCCCTTAACTTATTTT+TGG | + | chr6_2:71030032-71030051 | Msa0926960:CDS | 30.0% |
| !!! | AACATTGTCTTTGTTTTGAC+AGG | + | chr6_2:71031432-71031451 | None:intergenic | 30.0% |
| !! | ACTTAAAGTGTTGGACTTAA+TGG | + | chr6_2:71031482-71031501 | None:intergenic | 30.0% |
| AGGTACGTAAATTTCAGTTT+GGG | + | chr6_2:71031540-71031559 | None:intergenic | 30.0% | |
| AAGGTACGTAAATTTCAGTT+TGG | + | chr6_2:71031541-71031560 | None:intergenic | 30.0% | |
| TTTGGAAGGCTAGATTTATA+TGG | - | chr6_2:71031616-71031635 | Msa0926950:intron | 30.0% | |
| TTGGAAGGCTAGATTTATAT+GGG | - | chr6_2:71031617-71031636 | Msa0926950:intron | 30.0% | |
| TACCCAAAATATTAAGGTGT+AGG | - | chr6_2:71031972-71031991 | Msa0926950:intron | 30.0% | |
| ACCCAAAATATTAAGGTGTA+GGG | - | chr6_2:71031973-71031992 | Msa0926950:intron | 30.0% | |
| ! | ACCCTACACCTTAATATTTT+GGG | + | chr6_2:71031977-71031996 | None:intergenic | 30.0% |
| ! | AACCCTACACCTTAATATTT+TGG | + | chr6_2:71031978-71031997 | None:intergenic | 30.0% |
| ! | ACATTTTCTCCAATTTACCT+AGG | + | chr6_2:71032078-71032097 | None:intergenic | 30.0% |
| GTGAATGAACTTATCTTTAG+AGG | - | chr6_2:71032151-71032170 | Msa0926950:intron | 30.0% | |
| ! | AATGAACTTATCTTTAGAGG+AGG | - | chr6_2:71032154-71032173 | Msa0926950:intron | 30.0% |
| ! | ATGAACTTATCTTTAGAGGA+GGG | - | chr6_2:71032155-71032174 | Msa0926950:intron | 30.0% |
| ATATGAAAATCCTTCACTGT+TGG | + | chr6_2:71032229-71032248 | None:intergenic | 30.0% | |
| TATTGATGCACAGTTACAAA+AGG | + | chr6_2:71032261-71032280 | None:intergenic | 30.0% | |
| TTTGTAACTGTGCATCAATA+TGG | - | chr6_2:71032261-71032280 | Msa0926950:intron | 30.0% | |
| AAAACCAGAATTAGATGCTA+TGG | - | chr6_2:71032302-71032321 | Msa0926950:intron | 30.0% | |
| ! | AATATTTTCCCTACAACTCA+AGG | + | chr6_2:71032422-71032441 | None:intergenic | 30.0% |
| AAGGTATGGGAAATTTATAG+AGG | + | chr6_2:71032457-71032476 | None:intergenic | 30.0% | |
| TCTATAAATTTCCCATACCT+TGG | - | chr6_2:71032456-71032475 | Msa0926950:intron | 30.0% | |
| !!! | TTTGCTACTTTTGTCTTCTT+TGG | + | chr6_2:71032494-71032513 | None:intergenic | 30.0% |
| ! | TTTGAATTTTCCATTTGGAG+CGG | - | chr6_2:71032547-71032566 | Msa0926950:intron | 30.0% |
| ATTTACCAACGATCTGTAAA+TGG | - | chr6_2:71032693-71032712 | Msa0926950:intron | 30.0% | |
| TTTACCAACGATCTGTAAAT+GGG | - | chr6_2:71032694-71032713 | Msa0926950:intron | 30.0% | |
| GATATTAAGGACAAGAGTTT+AGG | - | chr6_2:71032784-71032803 | Msa0926950:intron | 30.0% | |
| GAAGTGAAATACATCATTGA+CGG | - | chr6_2:71026272-71026291 | Msa0926950:CDS | 30.0% | |
| AAGTGAAATACATCATTGAC+GGG | - | chr6_2:71026273-71026292 | Msa0926950:CDS | 30.0% | |
| ! | ACTAGAGTATTTGATAGAGA+TGG | - | chr6_2:71032873-71032892 | Msa0926950:intron | 30.0% |
| !!! | AATTTTTTCTTTCATGGAGG+AGG | - | chr6_2:71033067-71033086 | Msa0926950:CDS | 30.0% |
| ! | CCCAATGAAAATGATTTTAG+TGG | - | chr6_2:71033175-71033194 | Msa0926950:CDS | 30.0% |
| ATATTATTTGTTTCAGCGGA+GGG | - | chr6_2:71033253-71033272 | Msa0926950:CDS | 30.0% | |
| ! | AGTAATGGGAGTGTAATAGT+TGG | - | chr6_2:71026179-71026198 | Msa0926950:CDS | 35.0% |
| !!! | CTCTCTTTTTTGGAAGTTCA+TGG | + | chr6_2:71026216-71026235 | None:intergenic | 35.0% |
| CATGAACTTCCAAAAAAGAG+AGG | - | chr6_2:71026214-71026233 | Msa0926950:CDS | 35.0% | |
| CTTCCAAAAAAGAGAGGATA+AGG | - | chr6_2:71026220-71026239 | Msa0926950:CDS | 35.0% | |
| GAGGATAAGGATAAGAATGT+TGG | - | chr6_2:71026233-71026252 | Msa0926950:CDS | 35.0% | |
| AAGGATAAGAATGTTGGATG+TGG | - | chr6_2:71026239-71026258 | Msa0926950:CDS | 35.0% | |
| AGGATAAGAATGTTGGATGT+GGG | - | chr6_2:71026240-71026259 | Msa0926950:CDS | 35.0% | |
| CAAACATTTCAGCTATGCAT+AGG | + | chr6_2:71026485-71026504 | None:intergenic | 35.0% | |
| ! | TAGATATTGCTGTTGACCTA+TGG | + | chr6_2:71026763-71026782 | None:intergenic | 35.0% |
| ! | CAGTTTTCGTAAGAAGAAAG+AGG | + | chr6_2:71026786-71026805 | None:intergenic | 35.0% |
| GAAGTAACATGGTGCAATTT+GGG | + | chr6_2:71026855-71026874 | None:intergenic | 35.0% | |
| TGAAGTAACATGGTGCAATT+TGG | + | chr6_2:71026856-71026875 | None:intergenic | 35.0% | |
| ! | CATTTTCCTGTGAAGTAACA+TGG | + | chr6_2:71026866-71026885 | None:intergenic | 35.0% |
| ! | CATGTTACTTCACAGGAAAA+TGG | - | chr6_2:71026864-71026883 | Msa0926950:intron | 35.0% |
| GTAATCTTGTGTTTGTGACA+AGG | - | chr6_2:71026925-71026944 | Msa0926950:intron | 35.0% | |
| GTTGTAAGATGGATATCTCT+TGG | - | chr6_2:71027088-71027107 | Msa0926950:intron | 35.0% | |
| CTCTTGCGTATGTGATTATA+AGG | - | chr6_2:71027380-71027399 | Msa0926950:intron | 35.0% | |
| TGAATGCTCAAAGGTAACTT+AGG | - | chr6_2:71027422-71027441 | Msa0926950:intron | 35.0% | |
| !! | ATAGTGGATGATTAGTCATG+AGG | + | chr6_2:71027473-71027492 | None:intergenic | 35.0% |
| TGGGAAAATTATTAGCCCAT+TGG | - | chr6_2:71027629-71027648 | Msa0926950:intron | 35.0% | |
| GTGACGACATATATGATCAA+TGG | + | chr6_2:71027675-71027694 | None:intergenic | 35.0% | |
| !! | AATTGCTTGTTATGCACCTA+TGG | + | chr6_2:71027917-71027936 | None:intergenic | 35.0% |
| CGTAAACTCGTGCTTAATTT+AGG | - | chr6_2:71027943-71027962 | Msa0926950:intron | 35.0% | |
| ! | TCGTGCTTAATTTAGGATTG+AGG | - | chr6_2:71027950-71027969 | Msa0926950:intron | 35.0% |
| ! | CTGTTGGATCTAAAGTATCT+AGG | - | chr6_2:71027988-71028007 | Msa0926950:intron | 35.0% |
| ACTTTCTTATTACCCCATCT+TGG | - | chr6_2:71028026-71028045 | Msa0926950:intron | 35.0% | |
| ! | TAGGGTTATATAACTTGTCG+TGG | + | chr6_2:71028177-71028196 | None:intergenic | 35.0% |
| ! | ACTTTTGGACAATATGGCTA+GGG | + | chr6_2:71028195-71028214 | None:intergenic | 35.0% |
| ! | AACTTTTGGACAATATGGCT+AGG | + | chr6_2:71028196-71028215 | None:intergenic | 35.0% |
| AAGGACCGTTTAAATTGACA+TGG | + | chr6_2:71028286-71028305 | None:intergenic | 35.0% | |
| TGTCAATTTAAACGGTCCTT+CGG | - | chr6_2:71028286-71028305 | Msa0926950:intron | 35.0% | |
| ATTCGATGTTGTCACGAAAT+TGG | - | chr6_2:71028404-71028423 | Msa0926950:intron | 35.0% | |
| CTCATTTGTATGTAACCTTG+GGG | + | chr6_2:71028497-71028516 | None:intergenic | 35.0% | |
| CGTAACACAAACGTATAGAT+CGG | - | chr6_2:71028569-71028588 | Msa0926950:intron | 35.0% | |
| !! | GTACCGTTTAACTTTTGTGT+TGG | + | chr6_2:71028615-71028634 | None:intergenic | 35.0% |
| CACAAAAGTTAAACGGTACA+TGG | - | chr6_2:71028616-71028635 | Msa0926950:intron | 35.0% | |
| !! | TCTAAGGTGTTGGATATCAA+TGG | + | chr6_2:71028732-71028751 | None:intergenic | 35.0% |
| !!! | AAAAAGTGTTTTGAGAGGTG+AGG | + | chr6_2:71028921-71028940 | None:intergenic | 35.0% |
| TTCGTCTCTAGTGTCATAAA+CGG | + | chr6_2:71029075-71029094 | None:intergenic | 35.0% | |
| ! | ATATGGACATCCTAGTTTGT+TGG | - | chr6_2:71029165-71029184 | Msa0926950:intron | 35.0% |
| ATTTGACGCAATACCAAAGA+AGG | - | chr6_2:71029408-71029427 | Msa0926950:intron | 35.0% | |
| TTTGACGCAATACCAAAGAA+GGG | - | chr6_2:71029409-71029428 | Msa0926950:intron | 35.0% | |
| ! | TGATTTGGATGTTTCGATGA+AGG | + | chr6_2:71029448-71029467 | None:intergenic | 35.0% |
| TGAGGTTGGACTTTCAATAA+TGG | + | chr6_2:71029493-71029512 | Msa0926960:CDS | 35.0% | |
| TAGTCGAAAAAAAGTGAGGT+TGG | + | chr6_2:71029507-71029526 | Msa0926960:CDS | 35.0% | |
| ! | AAATGATGGGAATCTTCTTG+TGG | + | chr6_2:71029615-71029634 | Msa0926960:CDS | 35.0% |
| !! | TCCCATCATTTTTATCTCCA+TGG | - | chr6_2:71029624-71029643 | Msa0926950:intron | 35.0% |
| AAAATGGATGTTGCATACCA+TGG | + | chr6_2:71029644-71029663 | Msa0926960:CDS | 35.0% | |
| AATGAGACTAAGAACCATTG+GGG | + | chr6_2:71029677-71029696 | Msa0926960:CDS | 35.0% | |
| AATGTAAATACGGATCCAGT+AGG | - | chr6_2:71029782-71029801 | Msa0926950:intron | 35.0% | |
| ACACTACGTAGATGGTAAAT+CGG | + | chr6_2:71029882-71029901 | Msa0926960:intron | 35.0% | |
| ! | CATGGGAAATAGTTTTCCAT+CGG | + | chr6_2:71029981-71030000 | Msa0926960:CDS | 35.0% |
| GTAAACGGAGAGATACTTAA+GGG | + | chr6_2:71030100-71030119 | Msa0926960:CDS | 35.0% | |
| !! | AGCTATCTTGGTCTTTTTCT+GGG | + | chr6_2:71030291-71030310 | None:intergenic | 35.0% |
| !! | AAGCTATCTTGGTCTTTTTC+TGG | + | chr6_2:71030292-71030311 | None:intergenic | 35.0% |
| ! | TGTTGTTTGGAAGGAATTTG+TGG | + | chr6_2:71030333-71030352 | None:intergenic | 35.0% |
| ! | AGAAGAGAAGGGAATTTTCT+GGG | + | chr6_2:71030363-71030382 | None:intergenic | 35.0% |
| GAATTGTTTGGAAGGAAGAA+GGG | + | chr6_2:71030446-71030465 | None:intergenic | 35.0% | |
| TGAATTGTTTGGAAGGAAGA+AGG | + | chr6_2:71030447-71030466 | None:intergenic | 35.0% | |
| ! | CTTTTCGTGAATTGTTTGGA+AGG | + | chr6_2:71030454-71030473 | None:intergenic | 35.0% |
| ! | GTGACTTTTCGTGAATTGTT+TGG | + | chr6_2:71030458-71030477 | None:intergenic | 35.0% |
| GATTGAATTGCTGAATTCGA+AGG | - | chr6_2:71030727-71030746 | Msa0926950:intron | 35.0% | |
| !!! | TAGGGATTAGTTTTGTTTGC+CGG | + | chr6_2:71030807-71030826 | None:intergenic | 35.0% |
| ACGAGAGAGTGAATAAAGTA+GGG | + | chr6_2:71030825-71030844 | None:intergenic | 35.0% | |
| AACGAGAGAGTGAATAAAGT+AGG | + | chr6_2:71030826-71030845 | None:intergenic | 35.0% | |
| AAGAAGAAGAAGACGATTGA+AGG | + | chr6_2:71031006-71031025 | None:intergenic | 35.0% | |
| AGGAGGAAGATGAATCTTAA+CGG | - | chr6_2:71031237-71031256 | Msa0926950:intron | 35.0% | |
| CGAGACAATACTTAAAGTGT+TGG | + | chr6_2:71031491-71031510 | None:intergenic | 35.0% | |
| GGTACGTAAATTTCAGTTTG+GGG | + | chr6_2:71031539-71031558 | None:intergenic | 35.0% | |
| TAATATGCTTCTCTCAGGTT+TGG | - | chr6_2:71031598-71031617 | Msa0926950:intron | 35.0% | |
| GTATCTTGTTGGATCATGAA+GGG | - | chr6_2:71031876-71031895 | Msa0926950:intron | 35.0% | |
| GCAGATTATATAAGTGAGAG+AGG | + | chr6_2:71032008-71032027 | None:intergenic | 35.0% | |
| AGAAAATGTTCTTGCCAATC+AGG | - | chr6_2:71032089-71032108 | Msa0926950:intron | 35.0% | |
| GAAAATGTTCTTGCCAATCA+GGG | - | chr6_2:71032090-71032109 | Msa0926950:intron | 35.0% | |
| TTTATGTATGCCAACAGTGA+AGG | - | chr6_2:71032216-71032235 | Msa0926950:intron | 35.0% | |
| AACTCCATAGCATCTAATTC+TGG | + | chr6_2:71032309-71032328 | None:intergenic | 35.0% | |
| ! | TTTCTTCGTTTTACCGATGT+AGG | - | chr6_2:71032641-71032660 | Msa0926950:intron | 35.0% |
| ATTTCCCATTTACAGATCGT+TGG | + | chr6_2:71032701-71032720 | None:intergenic | 35.0% | |
| AGCTAAAGCTGAAAATGATC+TGG | - | chr6_2:71032964-71032983 | Msa0926950:intron | 35.0% | |
| GAATCCTTACAAAGTTACTG+TGG | - | chr6_2:71033135-71033154 | Msa0926950:CDS | 35.0% | |
| CATATTATTTGTTTCAGCGG+AGG | - | chr6_2:71033252-71033271 | Msa0926950:CDS | 35.0% | |
| GGATAAGAATGTTGGATGTG+GGG | - | chr6_2:71026241-71026260 | Msa0926950:CDS | 40.0% | |
| TTACAGGTACAAAACGCCAT+AGG | - | chr6_2:71026744-71026763 | Msa0926950:intron | 40.0% | |
| ! | ATTGCACCATGTTACTTCAC+AGG | - | chr6_2:71026857-71026876 | Msa0926950:intron | 40.0% |
| AGATGGATATCTCTTGGAGA+TGG | - | chr6_2:71027094-71027113 | Msa0926950:intron | 40.0% | |
| ! | ATTTGTTGACGAAAACGCTC+TGG | - | chr6_2:71027154-71027173 | Msa0926950:intron | 40.0% |
| !! | AAGATGGGCTTTTCATCGAA+CGG | - | chr6_2:71027781-71027800 | Msa0926950:intron | 40.0% |
| TTTGGGTATGCTACCAAGAT+GGG | + | chr6_2:71028042-71028061 | None:intergenic | 40.0% | |
| !! | TTTTGGGTATGCTACCAAGA+TGG | + | chr6_2:71028043-71028062 | None:intergenic | 40.0% |
| GAGGTTTCTTTGAGCAAATG+AGG | + | chr6_2:71028342-71028361 | None:intergenic | 40.0% | |
| TGAAAATTGTAACGTCCCCA+AGG | - | chr6_2:71028479-71028498 | Msa0926950:intron | 40.0% | |
| TGGTTTCCTTGGGAATTAAG+GGG | + | chr6_2:71028706-71028725 | None:intergenic | 40.0% | |
| GTGGTTTCCTTGGGAATTAA+GGG | + | chr6_2:71028707-71028726 | None:intergenic | 40.0% | |
| !! | AAGGTGTTGGATATCAATGG+AGG | + | chr6_2:71028729-71028748 | None:intergenic | 40.0% |
| AAGAAGATGAGACGATCTCA+TGG | + | chr6_2:71028976-71028995 | None:intergenic | 40.0% | |
| ! | AGCTTAGACTAGTGGACATA+GGG | + | chr6_2:71029002-71029021 | None:intergenic | 40.0% |
| AAACAAGACATCAGAGACGA+CGG | - | chr6_2:71029037-71029056 | Msa0926950:intron | 40.0% | |
| ACTAGAGACGAATGAAGACA+GGG | - | chr6_2:71029083-71029102 | Msa0926950:intron | 40.0% | |
| TCCTATAGTCACACCTTGAT+TGG | - | chr6_2:71029242-71029261 | Msa0926950:intron | 40.0% | |
| TCCAATCAAGGTGTGACTAT+AGG | + | chr6_2:71029246-71029265 | None:intergenic | 40.0% | |
| AACATGGATTTGGAAGTGGA+CGG | + | chr6_2:71029370-71029389 | None:intergenic | 40.0% | |
| CTAGAACATGGATTTGGAAG+TGG | + | chr6_2:71029374-71029393 | None:intergenic | 40.0% | |
| !! | ACCAAAGAAGGGTGTTCATA+AGG | - | chr6_2:71029420-71029439 | Msa0926950:intron | 40.0% |
| TCCTTATGAACACCCTTCTT+TGG | + | chr6_2:71029424-71029443 | None:intergenic | 40.0% | |
| GTGCAGCAGAAGAGAAAAAA+GGG | + | chr6_2:71029593-71029612 | Msa0926960:CDS | 40.0% | |
| TGTTTCATAAAGTGGATCGG+TGG | - | chr6_2:71029706-71029725 | Msa0926950:intron | 40.0% | |
| GTTTCATAAAGTGGATCGGT+GGG | - | chr6_2:71029707-71029726 | Msa0926950:intron | 40.0% | |
| TCACGAAGATGGTCTCATTA+AGG | + | chr6_2:71029831-71029850 | Msa0926960:CDS | 40.0% | |
| GGTAAACGGAGAGATACTTA+AGG | + | chr6_2:71030101-71030120 | Msa0926960:CDS | 40.0% | |
| TATCTCTCCGTTTACCAAAG+TGG | - | chr6_2:71030105-71030124 | Msa0926950:intron | 40.0% | |
| !! | AAGGATGAAGTTGATGAAGG+AGG | + | chr6_2:71031220-71031239 | None:intergenic | 40.0% |
| AGAGAAGACTGAAGCTATCT+TGG | + | chr6_2:71030303-71030322 | None:intergenic | 40.0% | |
| !! | GGTTGTTGTTGTTGTTTGGA+AGG | + | chr6_2:71030342-71030361 | None:intergenic | 40.0% |
| ! | TCTGGGTTGTTGTTGTTGTT+TGG | + | chr6_2:71030346-71030365 | None:intergenic | 40.0% |
| ! | GAGAAGAGAAGGGAATTTTC+TGG | + | chr6_2:71030364-71030383 | None:intergenic | 40.0% |
| GGATTGAGAAGAGAAGAGAA+GGG | + | chr6_2:71030374-71030393 | None:intergenic | 40.0% | |
| TGGATTGAGAAGAGAAGAGA+AGG | + | chr6_2:71030375-71030394 | None:intergenic | 40.0% | |
| !!! | CCAGCTATCTTGGTCTTTTT+TGG | + | chr6_2:71030559-71030578 | None:intergenic | 40.0% |
| CCAAAAAAGACCAAGATAGC+TGG | - | chr6_2:71030556-71030575 | Msa0926950:intron | 40.0% | |
| ! | TGGTGTTTTTCCAGCTATCT+TGG | + | chr6_2:71030569-71030588 | None:intergenic | 40.0% |
| TGAATTGCCTTTGTCTGATG+CGG | - | chr6_2:71030682-71030701 | Msa0926950:intron | 40.0% | |
| TTGTGACAGTGATGAATGGA+AGG | + | chr6_2:71030854-71030873 | None:intergenic | 40.0% | |
| ACAGTTGTGACAGTGATGAA+TGG | + | chr6_2:71030858-71030877 | None:intergenic | 40.0% | |
| !! | AAGGATGAAGTTGATGAAGG+AGG | - | chr6_2:71031220-71031239 | Msa0926950:intron | 40.0% |
| GTAAACGGAGAGATCCTTAA+GGG | - | chr6_2:71031294-71031313 | Msa0926950:intron | 40.0% | |
| TGTCTCAATTTGGTCCCTTA+AGG | + | chr6_2:71030083-71030102 | Msa0926960:CDS | 40.0% | |
| TTACGTACCTTGAATACACC+AGG | - | chr6_2:71031550-71031569 | Msa0926950:intron | 40.0% | |
| GGTATCTTGTTGGATCATGA+AGG | - | chr6_2:71031875-71031894 | Msa0926950:intron | 40.0% | |
| TTGGATCATGAAGGGAGTTT+AGG | - | chr6_2:71031884-71031903 | Msa0926950:intron | 40.0% | |
| TGGATCATGAAGGGAGTTTA+GGG | - | chr6_2:71031885-71031904 | Msa0926950:intron | 40.0% | |
| ! | CTTGATCACCTTGAGTTGTA+GGG | - | chr6_2:71032411-71032430 | Msa0926950:intron | 40.0% |
| GGACAAGAGTTTAGGAAAGA+CGG | - | chr6_2:71032792-71032811 | Msa0926950:intron | 40.0% | |
| TAGGTCACGTTATCAGAAAG+CGG | + | chr6_2:71033019-71033038 | None:intergenic | 40.0% | |
| AAAGAATCCGCGACTTTCAT+AGG | + | chr6_2:71033038-71033057 | None:intergenic | 40.0% | |
| TGAAAGTCGCGGATTCTTTA+AGG | - | chr6_2:71033039-71033058 | Msa0926950:intron | 40.0% | |
| ! | TTTTCTTTCATGGAGGAGGA+AGG | - | chr6_2:71033071-71033090 | Msa0926950:CDS | 40.0% |
| TTTCTTTCATGGAGGAGGAA+GGG | - | chr6_2:71033072-71033091 | Msa0926950:CDS | 40.0% | |
| TGTGCCACAGTAACTTTGTA+AGG | + | chr6_2:71033142-71033161 | None:intergenic | 40.0% | |
| ! | GATAGAGATGGTAGCGTTCA+AGG | - | chr6_2:71026329-71026348 | Msa0926950:CDS | 45.0% |
| AAAACGCTCTGGTGGAAATC+TGG | - | chr6_2:71027165-71027184 | Msa0926950:intron | 45.0% | |
| ! | GTGGAAATCTGGAGTACAGT+CGG | - | chr6_2:71027176-71027195 | Msa0926950:intron | 45.0% |
| TGGCGTGCATAGAAAAGTGA+CGG | - | chr6_2:71027742-71027761 | Msa0926950:intron | 45.0% | |
| GTGCATAGAAAAGTGACGGT+GGG | - | chr6_2:71027746-71027765 | Msa0926950:intron | 45.0% | |
| TTGGGTATGCTACCAAGATG+GGG | + | chr6_2:71028041-71028060 | None:intergenic | 45.0% | |
| GTTTCCTTGGGAATTAAGGG+GGG | + | chr6_2:71028704-71028723 | None:intergenic | 45.0% | |
| GGTTTCCTTGGGAATTAAGG+GGG | + | chr6_2:71028705-71028724 | None:intergenic | 45.0% | |
| GGTGGTTTCCTTGGGAATTA+AGG | + | chr6_2:71028708-71028727 | None:intergenic | 45.0% | |
| TCAATGGAGGTGGTTTCCTT+GGG | + | chr6_2:71028716-71028735 | None:intergenic | 45.0% | |
| ATCAATGGAGGTGGTTTCCT+TGG | + | chr6_2:71028717-71028736 | None:intergenic | 45.0% | |
| GTGTTGGATATCAATGGAGG+TGG | + | chr6_2:71028726-71028745 | None:intergenic | 45.0% | |
| ! | CAGCTTAGACTAGTGGACAT+AGG | + | chr6_2:71029003-71029022 | None:intergenic | 45.0% |
| CACTAGAGACGAATGAAGAC+AGG | - | chr6_2:71029082-71029101 | Msa0926950:intron | 45.0% | |
| GTGAAGAAATGGAACGGTCT+AGG | + | chr6_2:71029290-71029309 | None:intergenic | 45.0% | |
| ! | AAAGCCTTGTGCAATCAGAG+TGG | + | chr6_2:71029564-71029583 | Msa0926960:CDS | 45.0% |
| GGTGCAGCAGAAGAGAAAAA+AGG | + | chr6_2:71029594-71029613 | Msa0926960:CDS | 45.0% | |
| TTGGGGAGGGATTACGAAAA+TGG | + | chr6_2:71029660-71029679 | Msa0926960:CDS | 45.0% | |
| ! | TTTTCGTAATCCCTCCCCAA+TGG | - | chr6_2:71029660-71029679 | Msa0926950:intron | 45.0% |
| AGACTAAGAACCATTGGGGA+GGG | + | chr6_2:71029673-71029692 | Msa0926960:CDS | 45.0% | |
| ! | TTCGTTTTCTACGGACCTAC+TGG | + | chr6_2:71029800-71029819 | Msa0926960:CDS | 45.0% |
| ACAGTGTCACACTACGTAGA+TGG | + | chr6_2:71029890-71029909 | Msa0926960:intron | 45.0% | |
| AACACGCAGTTTCAGTAGAG+AGG | + | chr6_2:71029922-71029941 | Msa0926960:intron | 45.0% | |
| TTTCCATCGGAGAAGAACGT+GGG | + | chr6_2:71029968-71029987 | Msa0926960:CDS | 45.0% | |
| ! | TTTTCCATCGGAGAAGAACG+TGG | + | chr6_2:71029969-71029988 | Msa0926960:CDS | 45.0% |
| GAAGGGACCACTTTGGTAAA+CGG | + | chr6_2:71031279-71031298 | None:intergenic | 45.0% | |
| ATTAACGGAAGGGACCACTT+TGG | + | chr6_2:71031272-71031291 | None:intergenic | 45.0% | |
| GAGAAAGAGTGAAGCAAGCA+TGG | + | chr6_2:71030502-71030521 | None:intergenic | 45.0% | |
| AGACGAAGAAGCAGCGATTA+CGG | + | chr6_2:71030593-71030612 | None:intergenic | 45.0% | |
| AATCCTTCCGCATCAGACAA+AGG | + | chr6_2:71030692-71030711 | None:intergenic | 45.0% | |
| GAATTGCTGAATTCGAAGGG+AGG | - | chr6_2:71030731-71030750 | Msa0926950:intron | 45.0% | |
| ATTAACGGAAGGGACCACTT+TGG | - | chr6_2:71031272-71031291 | Msa0926950:intron | 45.0% | |
| GAAGGGACCACTTTGGTAAA+CGG | - | chr6_2:71031279-71031298 | Msa0926950:intron | 45.0% | |
| GATCTCTCCGTTTACCAAAG+TGG | + | chr6_2:71031289-71031308 | None:intergenic | 45.0% | |
| GGTAAACGGAGAGATCCTTA+AGG | - | chr6_2:71031293-71031312 | Msa0926950:intron | 45.0% | |
| CAACTCTCCTGGTGTATTCA+AGG | + | chr6_2:71031560-71031579 | None:intergenic | 45.0% | |
| GATTCAAGTCTCAACTCTCC+TGG | + | chr6_2:71031571-71031590 | None:intergenic | 45.0% | |
| GCTGCTAATATGCTTCTCTC+AGG | - | chr6_2:71031593-71031612 | Msa0926950:intron | 45.0% | |
| ATGCTTCTCTCAGGTTTGGA+AGG | - | chr6_2:71031602-71031621 | Msa0926950:intron | 45.0% | |
| GGATCATGAAGGGAGTTTAG+GGG | - | chr6_2:71031886-71031905 | Msa0926950:intron | 45.0% | |
| GTTTAGGGGATCATCCACAT+TGG | - | chr6_2:71031900-71031919 | Msa0926950:intron | 45.0% | |
| TGGTTGCTCTTGATCCAATG+TGG | + | chr6_2:71031917-71031936 | None:intergenic | 45.0% | |
| ACTATCTTCAACGTCGACCT+AGG | - | chr6_2:71032058-71032077 | Msa0926950:intron | 45.0% | |
| CAACGTCGACCTAGGTAAAT+TGG | - | chr6_2:71032066-71032085 | Msa0926950:intron | 45.0% | |
| ! | GCTTGATCACCTTGAGTTGT+AGG | - | chr6_2:71032410-71032429 | Msa0926950:intron | 45.0% |
| TTGCATGCTTGCCAAGGTAT+GGG | + | chr6_2:71032470-71032489 | None:intergenic | 45.0% | |
| TTTGCATGCTTGCCAAGGTA+TGG | + | chr6_2:71032471-71032490 | None:intergenic | 45.0% | |
| !! | TTTGGTTTGCATGCTTGCCA+AGG | + | chr6_2:71032476-71032495 | None:intergenic | 45.0% |
| GATAGAGATGGTAGCACTCA+AGG | - | chr6_2:71032885-71032904 | Msa0926950:intron | 45.0% | |
| AACGTGACCTATGAAAGTCG+CGG | - | chr6_2:71033028-71033047 | Msa0926950:intron | 45.0% | |
| TTCTTTCATGGAGGAGGAAG+GGG | - | chr6_2:71033073-71033092 | Msa0926950:CDS | 45.0% | |
| GAACAGAATAGCATGCAGAG+AGG | - | chr6_2:71033109-71033128 | Msa0926950:CDS | 45.0% | |
| !!! | TAATTTTAATTAAATAATCT+TGG | + | chr6_2:71031719-71031738 | None:intergenic | 5.0% |
| !! | TATTTAATTAAAATTATAAG+AGG | - | chr6_2:71031723-71031742 | Msa0926950:intron | 5.0% |
| !! | ATTTAATTAAAATTATAAGA+GGG | - | chr6_2:71031724-71031743 | Msa0926950:intron | 5.0% |
| AATGTTGGATGTGGGGACAG+CGG | - | chr6_2:71026248-71026267 | Msa0926950:CDS | 50.0% | |
| TGTTGACGAAAACGCTCTGG+TGG | - | chr6_2:71027157-71027176 | Msa0926950:intron | 50.0% | |
| GTCACCATTGAAGCGACACA+TGG | - | chr6_2:71027690-71027709 | Msa0926950:intron | 50.0% | |
| !! | CAGACCATGTGTCGCTTCAA+TGG | + | chr6_2:71027697-71027716 | None:intergenic | 50.0% |
| CATTGAAGCGACACATGGTC+TGG | - | chr6_2:71027695-71027714 | Msa0926950:intron | 50.0% | |
| GACACATGGTCTGGTTGAAG+CGG | - | chr6_2:71027704-71027723 | Msa0926950:intron | 50.0% | |
| ATGGTCTGGTTGAAGCGGTA+GGG | - | chr6_2:71027709-71027728 | Msa0926950:intron | 50.0% | |
| CGTGCATAGAAAAGTGACGG+TGG | - | chr6_2:71027745-71027764 | Msa0926950:intron | 50.0% | |
| GCGTGCTGTGAACAAACCAT+AGG | - | chr6_2:71027898-71027917 | Msa0926950:intron | 50.0% | |
| TGAGAGGTGAGGTCAAGAGT+GGG | + | chr6_2:71028910-71028929 | None:intergenic | 50.0% | |
| TTGAGAGGTGAGGTCAAGAG+TGG | + | chr6_2:71028911-71028930 | None:intergenic | 50.0% | |
| CGTCTCTCAGCTTAGACTAG+TGG | + | chr6_2:71029010-71029029 | None:intergenic | 50.0% | |
| GAACGGTCTAGGCAAATCAG+AGG | + | chr6_2:71029279-71029298 | None:intergenic | 50.0% | |
| ! | TGTGCCACTCTGATTGCACA+AGG | - | chr6_2:71029557-71029576 | Msa0926950:intron | 50.0% |
| GAGACTAAGAACCATTGGGG+AGG | + | chr6_2:71029674-71029693 | Msa0926960:CDS | 50.0% | |
| CGCAGTTTCAGTAGAGAGGA+AGG | + | chr6_2:71029918-71029937 | Msa0926960:intron | 50.0% | |
| GAAGAAGCAGCGATTACGGA+TGG | + | chr6_2:71030589-71030608 | None:intergenic | 50.0% | |
| TTGCCTTTGTCTGATGCGGA+AGG | - | chr6_2:71030686-71030705 | Msa0926950:intron | 50.0% | |
| TGTTCTTGCCAATCAGGGTG+TGG | - | chr6_2:71032095-71032114 | Msa0926950:intron | 50.0% | |
| TCCTGTAACCACACCCTGAT+TGG | + | chr6_2:71032106-71032125 | None:intergenic | 50.0% | |
| TTGTACACAGCCGCTCCAAA+TGG | + | chr6_2:71032560-71032579 | None:intergenic | 50.0% | |
| ATGTTGGATGTGGGGACAGC+GGG | - | chr6_2:71026249-71026268 | Msa0926950:CDS | 55.0% | |
| CATGGTCTGGTTGAAGCGGT+AGG | - | chr6_2:71027708-71027727 | Msa0926950:intron | 55.0% | |
| TCTGGTTGAAGCGGTAGGGA+GGG | - | chr6_2:71027713-71027732 | Msa0926950:intron | 55.0% | |
| AGCGGTAGGGAGGGAAGAAA+TGG | - | chr6_2:71027722-71027741 | Msa0926950:intron | 55.0% | |
| GCAACCCCCCTTAATTCCCA+AGG | - | chr6_2:71028697-71028716 | Msa0926950:intron | 55.0% | |
| GTTCCCACGTTCTTCTCCGA+TGG | - | chr6_2:71029962-71029981 | Msa0926950:intron | 55.0% | |
| GCCAATCAGGGTGTGGTTAC+AGG | - | chr6_2:71032102-71032121 | Msa0926950:intron | 55.0% | |
| TGTTGGATGTGGGGACAGCG+GGG | - | chr6_2:71026250-71026269 | Msa0926950:CDS | 60.0% | |
| GTCTGGTTGAAGCGGTAGGG+AGG | - | chr6_2:71027712-71027731 | Msa0926950:intron | 60.0% | |
| GAGGTGAGGTCAAGAGTGGG+TGG | + | chr6_2:71028907-71028926 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 71026161 | 71033288 | 71026161 | ID=Msa0926950;Name=Msa0926950 |
| chr6_2 | mRNA | 71026161 | 71033288 | 71026161 | ID=Msa0926950-mRNA-1;Parent=Msa0926950;Name=Msa0926950-mRNA-1;_AED=0.43;_eAED=0.45;_QI=0|0|0|1|0|0.66|3|0|220 |
| chr6_2 | exon | 71033063 | 71033288 | 71033063 | ID=Msa0926950-mRNA-1:exon:11754;Parent=Msa0926950-mRNA-1 |
| chr6_2 | exon | 71026543 | 71026656 | 71026543 | ID=Msa0926950-mRNA-1:exon:11753;Parent=Msa0926950-mRNA-1 |
| chr6_2 | exon | 71026161 | 71026483 | 71026161 | ID=Msa0926950-mRNA-1:exon:11752;Parent=Msa0926950-mRNA-1 |
| chr6_2 | CDS | 71033063 | 71033288 | 71033063 | ID=Msa0926950-mRNA-1:cds;Parent=Msa0926950-mRNA-1 |
| chr6_2 | CDS | 71026543 | 71026656 | 71026543 | ID=Msa0926950-mRNA-1:cds;Parent=Msa0926950-mRNA-1 |
| chr6_2 | CDS | 71026161 | 71026483 | 71026161 | ID=Msa0926950-mRNA-1:cds;Parent=Msa0926950-mRNA-1 |
| Gene Sequence |
| Protein sequence |
