AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1271280


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271280 MtrunA17_Chr8g0335021 97.959 147 3 0 84 230 312 458 7.76e-103 305
Msa1271280 MtrunA17_Chr8g0335021 58.333 84 35 0 3 86 368 451 7.99e-26 104
Msa1271280 MtrunA17_Chr8g0335071 75.694 144 35 0 84 227 316 459 1.82e-74 233
Msa1271280 MtrunA17_Chr8g0335071 48.235 85 44 0 2 86 371 455 2.47e-19 85.9
Msa1271280 MtrunA17_Chr8g0335061 64.286 140 50 0 87 226 303 442 8.11e-64 204
Msa1271280 MtrunA17_Chr8g0335061 58.537 82 34 0 2 83 355 436 6.79e-29 112
Msa1271280 MtrunA17_Chr8g0334971 64.667 150 50 1 77 226 297 443 1.07e-62 202
Msa1271280 MtrunA17_Chr8g0334971 60.976 82 32 0 2 83 356 437 8.24e-31 117
Msa1271280 MtrunA17_Chr8g0335011 60.417 144 57 0 84 227 354 497 5.74e-56 186
Msa1271280 MtrunA17_Chr8g0335011 91.566 83 7 0 2 84 409 491 3.87e-48 165
Msa1271280 MtrunA17_Chr8g0334981 90.123 81 8 0 9 89 1 81 2.07e-49 156
Msa1271280 MtrunA17_Chr8g0334981 54.878 82 37 0 146 227 1 82 1.03e-25 95.9
Msa1271280 MtrunA17_Chr8g0334911 45.405 185 87 5 37 221 256 426 3.72e-44 153
Msa1271280 MtrunA17_Chr8g0334911 44.186 86 40 1 2 87 352 429 3.67e-16 76.6
Msa1271280 MtrunA17_Chr8g0334951 52.593 135 52 2 87 221 303 425 9.89e-42 146
Msa1271280 MtrunA17_Chr8g0334951 43.373 83 35 2 2 84 355 425 2.10e-14 71.6
Msa1271280 MtrunA17_Chr7g0218171 36.184 152 91 2 67 216 142 289 8.18e-28 107
Msa1271280 MtrunA17_Chr6g0452611 37.984 129 78 1 84 210 266 394 1.02e-24 100
Msa1271280 MtrunA17_Chr6g0452501 38.760 129 77 1 84 210 268 396 2.96e-24 99.8
Msa1271280 MtrunA17_Chr6g0452551 36.842 133 81 2 84 213 265 397 6.35e-24 98.6
Msa1271280 MtrunA17_Chr6g0452541 35.099 151 86 2 71 209 69 219 2.37e-23 94.4
Msa1271280 MtrunA17_Chr6g0452601 36.957 138 85 1 84 219 276 413 3.58e-23 96.7
Msa1271280 MtrunA17_Chr6g0452531 37.984 129 78 1 84 210 268 396 3.76e-23 96.7
Msa1271280 MtrunA17_Chr6g0457371 37.984 129 78 1 84 210 263 391 4.79e-23 96.3
Msa1271280 MtrunA17_Chr2g0296801 33.333 138 90 1 84 219 206 343 5.85e-22 92.4
Msa1271280 MtrunA17_Chr6g0452571 35.135 148 92 2 84 229 206 351 1.84e-21 91.3
Msa1271280 MtrunA17_Chr6g0452161 35.606 132 79 2 84 209 274 405 3.19e-21 91.3
Msa1271280 MtrunA17_Chr6g0452591 34.532 139 88 2 84 219 297 435 5.37e-21 90.5
Msa1271280 MtrunA17_Chr6g0452561 34.028 144 87 3 84 219 277 420 1.43e-20 89.4
Msa1271280 MtrunA17_Chr3g0138001 35.156 128 81 1 84 209 278 405 8.39e-20 87.4
Msa1271280 MtrunA17_Chr3g0118601 34.783 138 88 1 84 219 307 444 1.49e-19 86.7
Msa1271280 MtrunA17_Chr5g0401791 41.935 124 70 2 84 205 384 507 5.90e-18 82.0
Msa1271280 MtrunA17_Chr7g0238511 28.108 185 129 2 40 223 248 429 1.38e-16 78.2
Msa1271280 MtrunA17_Chr7g0238211 32.773 119 79 1 84 201 39 157 6.30e-16 73.2
Msa1271280 MtrunA17_Chr5g0439721 34.328 134 85 2 84 216 291 422 3.37e-15 73.9
Msa1271280 MtrunA17_Chr7g0238081 33.913 115 75 1 84 197 39 153 3.65e-15 70.9
Msa1271280 MtrunA17_Chr5g0439681 30.952 168 105 4 71 227 144 311 7.48e-15 72.4
Msa1271280 MtrunA17_Chr5g0439641 27.586 145 104 1 84 227 306 450 1.35e-14 72.4
Msa1271280 MtrunA17_Chr5g0440401 30.405 148 102 1 84 230 73 220 1.42e-14 70.1
Msa1271280 MtrunA17_Chr7g0238091 31.579 133 89 2 84 214 75 207 3.73e-14 68.9
Msa1271280 MtrunA17_Chr7g0238231 31.206 141 93 2 84 223 346 483 3.94e-14 70.9
Msa1271280 MtrunA17_Chr7g0238171 34.043 141 88 3 84 223 376 512 7.61e-14 70.1
Msa1271280 MtrunA17_Chr7g0265891 33.607 122 75 3 86 201 306 427 9.01e-14 69.7
Msa1271280 MtrunA17_Chr7g0238101 31.579 133 89 2 84 214 335 467 1.25e-13 69.3
Msa1271280 MtrunA17_Chr8g0354871 28.000 175 103 4 63 216 199 371 1.74e-13 68.9
Msa1271280 MtrunA17_Chr7g0232521 31.148 122 83 1 84 204 76 197 2.01e-13 67.0
Msa1271280 MtrunA17_Chr7g0238111 31.690 142 84 3 84 224 296 425 2.50e-13 68.6
Msa1271280 MtrunA17_Chr7g0238241 28.758 153 108 1 50 201 289 441 5.29e-13 67.8
Msa1271280 MtrunA17_Chr8g0354591 31.469 143 80 4 84 210 303 443 1.21e-12 66.6
Msa1271280 MtrunA17_Chr7g0238051 27.737 137 98 1 84 219 221 357 7.43e-12 63.9
Msa1271280 MtrunA17_Chr7g0238181 30.986 142 85 3 84 224 219 348 9.83e-12 63.5
Msa1271280 MtrunA17_Chr2g0297821 30.370 135 89 3 84 215 39 171 1.80e-11 61.2
Msa1271280 MtrunA17_Chr7g0220521 34.000 100 65 1 84 182 399 498 2.70e-11 62.8
Msa1271280 MtrunA17_Chr6g0452511 38.095 63 39 0 102 164 1 63 3.56e-11 57.8
Msa1271280 MtrunA17_Chr7g0238131 30.827 133 90 2 84 214 271 403 3.61e-11 62.0
Msa1271280 MtrunA17_Chr2g0297831 30.370 135 89 3 84 215 322 454 5.63e-11 61.6
Msa1271280 MtrunA17_Chr4g0002861 30.370 135 91 2 69 202 396 528 7.96e-11 61.2
Msa1271280 MtrunA17_Chr6g0452581 36.905 84 51 2 102 185 1 82 8.55e-11 58.2
Msa1271280 MtrunA17_Chr4g0002911 27.097 155 110 2 66 219 391 543 8.60e-11 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1271280 AT2G28580.6 36.765 136 86 0 84 219 307 442 1.70e-27 109
Msa1271280 AT2G28580.5 36.765 136 86 0 84 219 358 493 2.98e-27 108
Msa1271280 AT2G28580.1 36.765 136 86 0 84 219 375 510 3.20e-27 108
Msa1271280 AT2G28580.2 36.765 136 86 0 84 219 389 524 3.33e-27 109
Msa1271280 AT2G28580.4 36.765 136 86 0 84 219 372 507 3.52e-27 108
Msa1271280 AT2G44930.1 37.500 136 85 0 84 219 355 490 8.53e-25 102
Msa1271280 AT2G44930.1 41.026 78 46 0 2 79 410 487 9.41e-11 61.2
Msa1271280 AT3G50120.1 36.765 136 84 2 83 216 380 515 3.10e-20 89.4
Msa1271280 AT3G50150.1 30.256 195 114 4 37 228 331 506 3.12e-20 89.0
Msa1271280 AT1G67150.3 30.597 134 92 1 84 216 218 351 1.57e-19 86.3
Msa1271280 AT3G50160.1 34.228 149 95 2 83 228 350 498 1.63e-19 87.0
Msa1271280 AT1G67150.4 30.597 134 92 1 84 216 261 394 2.29e-19 86.3
Msa1271280 AT1G67150.1 30.597 134 92 1 84 216 261 394 2.29e-19 86.3
Msa1271280 AT1G67150.2 30.597 134 92 1 84 216 265 398 2.51e-19 86.3
Msa1271280 AT3G50170.1 35.294 136 86 1 83 216 388 523 8.05e-18 82.0
Msa1271280 AT3G60470.1 34.307 137 89 1 84 219 393 529 4.21e-17 80.1
Msa1271280 AT4G31980.1 34.228 149 91 4 58 205 516 658 4.85e-17 80.1
Msa1271280 AT5G11290.1 30.882 136 93 1 84 219 211 345 5.37e-17 79.0
Msa1271280 AT5G11290.2 30.882 136 93 1 84 219 280 414 1.34e-16 78.6
Msa1271280 AT2G36430.1 35.593 118 74 2 86 201 302 419 4.03e-16 77.0
Msa1271280 AT3G50140.1 32.593 135 89 2 84 216 389 523 6.84e-16 76.6
Msa1271280 AT3G50130.1 36.364 121 75 2 83 201 413 533 9.36e-16 76.3
Msa1271280 AT3G02645.1 35.294 119 76 1 86 203 380 498 1.73e-15 75.5
Msa1271280 AT3G50180.1 34.400 125 76 3 83 201 433 557 2.13e-14 72.4
Msa1271280 AT1G65985.1 32.576 132 86 2 72 201 295 425 8.52e-14 70.5
Msa1271280 AT1G65985.2 32.576 132 86 2 72 201 295 425 8.52e-14 70.5
Msa1271280 AT2G28580.3 47.458 59 31 0 84 142 389 447 5.38e-12 65.1
Msa1271280 AT3G50190.1 31.655 139 88 3 84 216 340 477 5.37e-11 62.0

Find 113 sgRNAs with CRISPR-Local

Find 548 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATAAGCATTATCAGAATATT+TGG 0.154201 8_3:+4748117 Msa1271280:five_prime_UTR
ATAAGCATTATCAGAATATT+TGG 0.154201 8_3:+4752204 Msa1271280:CDS
CTTGATACTGACATTGTTCT+AGG 0.157660 8_3:-4747896 None:intergenic
ATTAACTTTGTTACTGTTCT+TGG 0.162375 8_3:-4747672 None:intergenic
TAACTGGTGGAAACATTATA+TGG 0.253364 8_3:+4753341 Msa1271280:CDS
CTGCTAAACTTAACTCTTCT+AGG 0.268196 8_3:-4746804 None:intergenic
GAATTGGCAACATTGGTTAA+TGG 0.296171 8_3:+4753246 Msa1271280:CDS
TGTACGAATTAAAGAATAAA+TGG 0.302767 8_3:+4748399 Msa1271280:five_prime_UTR
GAAGTGGCAGTTCTTGTTAA+TGG 0.309248 8_3:+4752122 Msa1271280:CDS
CTGCATGACTTCCAAGTTCA+TGG 0.314386 8_3:-4753224 None:intergenic
ACCATTTCAAAGCGCGTCTA+AGG 0.318480 8_3:+4747817 Msa1271280:five_prime_UTR
GAACCTGTTGGTTGGTAGAT+AGG 0.319426 8_3:-4745193 None:intergenic
ACGTGAAACTAAGCTTGTTT+TGG 0.326591 8_3:+4747437 Msa1271280:five_prime_UTR
GAAACATAATTGCATATATA+AGG 0.329067 8_3:-4747924 None:intergenic
GACTTTGTAGTTCTTGATCA+TGG 0.348123 8_3:-4747007 None:intergenic
AAGCAACAGAATGTGTTCTT+AGG 0.348136 8_3:+4753073 Msa1271280:CDS
TCTTTATTTCCAAGGTGAAT+TGG 0.350401 8_3:-4746907 None:intergenic
ATCAAATCAGTGAAATGTTT+AGG 0.353279 8_3:-4747585 None:intergenic
TTACCTTCCAGCTGATTTAA+CGG 0.361070 8_3:+4747617 Msa1271280:five_prime_UTR
GCACTACATGATTAAAGTTA+AGG 0.365538 8_3:+4745040 None:intergenic
TGAATGAACATTATAATAAC+TGG 0.371937 8_3:+4753325 Msa1271280:CDS
GACATTGTTCGAACGCGATT+AGG 0.372840 8_3:-4753098 None:intergenic
ATTTGTCACCAGGTATACTA+TGG 0.373738 8_3:-4745143 None:intergenic
TTGTTATGGAAAGATCATTA+AGG 0.389525 8_3:+4753299 Msa1271280:CDS
AACATTTCACTGATTTGATA+AGG 0.390830 8_3:+4747589 Msa1271280:five_prime_UTR
ACTCCTCAATTAATCTCAAT+TGG 0.392658 8_3:+4746883 Msa1271280:five_prime_UTR
GTAACAAAGTTAATAGATTC+TGG 0.396787 8_3:+4747681 Msa1271280:five_prime_UTR
AAGAAACCGTTCATGGAAAT+CGG 0.400354 8_3:+4747152 Msa1271280:five_prime_UTR
GAAGTGGCAGTGCTTGTTAA+TGG 0.401978 8_3:+4748035 Msa1271280:five_prime_UTR
ACTTGGAAGTCATGCAGAAT+TGG 0.403752 8_3:+4753230 Msa1271280:CDS
ATAGACGCTCATAGAAGAAA+TGG 0.406927 8_3:-4746966 None:intergenic
TCCTTAGACGCGCTTTGAAA+TGG 0.415205 8_3:-4747818 None:intergenic
TCTAAATCCGTTAAATCAGC+TGG 0.442093 8_3:-4747624 None:intergenic
ACATGAAGATGTTGAGTTGT+TGG 0.443426 8_3:+4753182 Msa1271280:CDS
AGCAATAACCATAGGTTTCA+AGG 0.443493 8_3:+4747561 Msa1271280:five_prime_UTR
CAGAGAAAATAACTCAGAAA+TGG 0.447228 8_3:-4747762 None:intergenic
AATCAACATCAACTTGTGTA+TGG 0.449318 8_3:-4747965 None:intergenic
CACTACATGATTAAAGTTAA+GGG 0.449752 8_3:+4745041 None:intergenic
ATCTGAAACTGAATATGAAA+TGG 0.454211 8_3:+4746756 Msa1271280:five_prime_UTR
GTTTAGGACCTTGAAACCTA+TGG 0.455366 8_3:-4747569 None:intergenic
ACAAGTTGATGTTGATTTGT+TGG 0.455972 8_3:+4747971 Msa1271280:five_prime_UTR
AGAGCTAGTTCTACTTTGGT+TGG 0.457619 8_3:+4748188 Msa1271280:five_prime_UTR
AGAGCTAGTTCTACTTTGGT+TGG 0.457619 8_3:+4752275 Msa1271280:CDS
AGAGTTAGTTCAACTGTTGT+TGG 0.459714 8_3:+4753399 Msa1271280:CDS
TAAGAACACATTCTGTTGCT+TGG 0.460229 8_3:-4753071 None:intergenic
GGAAGTGATTGTGCATGAAA+TGG 0.461128 8_3:+4748001 Msa1271280:five_prime_UTR
GGAAGTGATTGTGCATGAAA+TGG 0.461128 8_3:+4752088 Msa1271280:intron
TCTACATTCAAATGCGGGAT+TGG 0.462315 8_3:-4753048 None:intergenic
GGACCAATTGAGATTAATTG+AGG 0.464532 8_3:-4746886 None:intergenic
TTGGAGAGCTAGTTCTACTT+TGG 0.466290 8_3:+4748184 Msa1271280:five_prime_UTR
TTGGAGAGCTAGTTCTACTT+TGG 0.466290 8_3:+4752271 Msa1271280:CDS
AACATTATATGGGAATGTTA+AGG 0.469604 8_3:+4753352 Msa1271280:CDS
GTGGTGACATCAAATTGTTA+TGG 0.484272 8_3:+4753285 Msa1271280:CDS
CTTGAGCAATATTTGTCACC+AGG 0.486876 8_3:-4745153 None:intergenic
ATTCCTATCTACCAACCAAC+AGG 0.493044 8_3:+4745190 Msa1271280:five_prime_UTR
AACAATGTTATGATGTTGAA+GGG 0.493158 8_3:+4748492 Msa1271280:five_prime_UTR
AGTGGCTTAATTGGTGATGT+TGG 0.493716 8_3:+4747492 Msa1271280:five_prime_UTR
GTTGAAGTTCTTTATTTCCA+AGG 0.495312 8_3:-4746915 None:intergenic
ATGAGAAGATTATGTAATGA+AGG 0.496166 8_3:+4748526 Msa1271280:exon
TCTAAGGATTCCGCAGTTGA+AGG 0.499213 8_3:+4747833 Msa1271280:five_prime_UTR
GAAATCATTAGCCATGAACT+TGG 0.500879 8_3:+4753213 Msa1271280:CDS
CATAGTTGCATATGAAAGGT+TGG 0.506971 8_3:-4753131 None:intergenic
GAACAATGTTATGATGTTGA+AGG 0.508264 8_3:+4748491 Msa1271280:five_prime_UTR
ATTACATTCTAACACAAGCT+TGG 0.511928 8_3:+4747238 Msa1271280:five_prime_UTR
TGTTGATTTGTTGGTGGAGA+AGG 0.512953 8_3:+4747980 Msa1271280:five_prime_UTR
AACTGGTGGAAACATTATAT+GGG 0.515685 8_3:+4753342 Msa1271280:CDS
TTGATACTGACATTGTTCTA+GGG 0.522905 8_3:-4747895 None:intergenic
ATGTTTCAATCTAAATGACT+TGG 0.523292 8_3:-4747208 None:intergenic
GAAGTGATTGTGCATGAAAT+GGG 0.523677 8_3:+4748002 Msa1271280:five_prime_UTR
GAAGTGATTGTGCATGAAAT+GGG 0.523677 8_3:+4752089 Msa1271280:CDS
CTTGGTCTACATTCAAATGC+GGG 0.526420 8_3:-4753053 None:intergenic
AGCAGACTGTAGCATCTACA+AGG 0.532357 8_3:+4746822 Msa1271280:five_prime_UTR
TCATGCAGAATTGGCAACAT+TGG 0.537428 8_3:+4753239 Msa1271280:CDS
TTAACGGATTTAGAAAAGAG+TGG 0.543465 8_3:+4747633 Msa1271280:five_prime_UTR
CACCAACCACAATGCAGCCA+TGG 0.546124 8_3:-4748147 None:intergenic
CACCAACCACAATGCAGCCA+TGG 0.546124 8_3:-4752234 None:intergenic
GAAACATAGTTGCATATGAA+AGG 0.547120 8_3:-4753135 None:intergenic
TGGTTCAAACATGAAAATGA+AGG 0.548134 8_3:-4747798 None:intergenic
TGATTAAAGTTAAGGGGCAG+TGG 0.551296 8_3:+4745048 None:intergenic
TCAATTGGTCCAATTCACCT+TGG 0.558480 8_3:+4746898 Msa1271280:five_prime_UTR
TTAATTGGTGATGTTGGTAG+TGG 0.564871 8_3:+4747498 Msa1271280:five_prime_UTR
GTAATGTAAGTATTAAACTC+TGG 0.571479 8_3:+4748441 Msa1271280:five_prime_UTR
ACCACAATGCAGCCATGGTA+CGG 0.571593 8_3:-4748142 None:intergenic
ACCACAATGCAGCCATGGTA+CGG 0.571593 8_3:-4752229 None:intergenic
AGTTGATGTTGATTTGTTGG+TGG 0.572996 8_3:+4747974 Msa1271280:five_prime_UTR
ATGTATCCGATTTCCATGAA+CGG 0.580945 8_3:-4747158 None:intergenic
TGGTCTTTGTAAACATGTTG+TGG 0.582048 8_3:+4748055 Msa1271280:five_prime_UTR
TGGTCTTTGTAAACATGTTG+TGG 0.582048 8_3:+4752142 Msa1271280:CDS
AATCTATGAGCAATAACCAT+AGG 0.583238 8_3:+4747553 Msa1271280:five_prime_UTR
GAACACAACCATAGTATACC+TGG 0.588619 8_3:+4745135 Msa1271280:five_prime_UTR
CATTGTTCGTAATATTGTAG+TGG 0.589968 8_3:-4748476 None:intergenic
ACAGTTGAACTAACTCTCCA+AGG 0.590172 8_3:-4753393 None:intergenic
TATGATAATAATGCAAACCA+TGG 0.592220 8_3:-4748294 None:intergenic
GACATTGTTCTAGGGCAATG+AGG 0.593451 8_3:-4747887 None:intergenic
GGCTCAGCAAAAGCATCACA+AGG 0.605591 8_3:+4747259 Msa1271280:five_prime_UTR
AACTTTGTACGTCTTGCCAG+AGG 0.608544 8_3:+4748239 Msa1271280:five_prime_UTR
TACCATGGCTGCATTGTGGT+TGG 0.611964 8_3:+4748145 Msa1271280:five_prime_UTR
TACCATGGCTGCATTGTGGT+TGG 0.611964 8_3:+4752232 Msa1271280:CDS
GCTTGGTCTACATTCAAATG+CGG 0.614751 8_3:-4753054 None:intergenic
ATGAACATTATAATAACTGG+TGG 0.615438 8_3:+4753328 Msa1271280:CDS
ACTACATGATTAAAGTTAAG+GGG 0.619370 8_3:+4745042 None:intergenic
AATCCGTTAAATCAGCTGGA+AGG 0.622325 8_3:-4747620 None:intergenic
TGGTCTTTGCAAATATGTTG+TGG 0.629307 8_3:+4753266 Msa1271280:CDS
AATGGGAAGTGATAAAGAAG+TGG 0.638138 8_3:+4748019 Msa1271280:five_prime_UTR
AATGGGAAGTGATAAAGAAG+TGG 0.638138 8_3:+4752106 Msa1271280:CDS
GAATATTTGGAACCGTACCA+TGG 0.643141 8_3:+4748130 Msa1271280:five_prime_UTR
GAATATTTGGAACCGTACCA+TGG 0.643141 8_3:+4752217 Msa1271280:CDS
TTTCTGGTAGAAGAGACCTC+TGG 0.652209 8_3:-4748255 None:intergenic
TTATATGGGAATGTTAAGGT+CGG 0.661560 8_3:+4753356 Msa1271280:CDS
GTGTGATCAACCTTCAACTG+CGG 0.710202 8_3:-4747843 None:intergenic
GCTCAGCAAAAGCATCACAA+GGG 0.717992 8_3:+4747260 Msa1271280:five_prime_UTR
ACCGTACCATGGCTGCATTG+TGG 0.722473 8_3:+4748141 Msa1271280:five_prime_UTR
ACCGTACCATGGCTGCATTG+TGG 0.722473 8_3:+4752228 Msa1271280:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATTATTTATATAAATTT+GGG - chr8_3:4748718-4748737 None:intergenic 0.0%
!! ATTTATTATTTATATAAATT+TGG - chr8_3:4748719-4748738 None:intergenic 0.0%
!! TTTATTATTTATATAAATTT+GGG - chr8_3:4748718-4748737 None:intergenic 0.0%
!! ATTTATTATTTATATAAATT+TGG - chr8_3:4748719-4748738 None:intergenic 0.0%
!! TCTTAGAAAATTAAAAAAAT+AGG + chr8_3:4745648-4745667 Msa1271280:intron 10.0%
!!! TCTTTATATAATTGATTTAA+AGG + chr8_3:4745913-4745932 Msa1271280:intron 10.0%
!!! TTTTAATTATAAGATAAGAT+AGG + chr8_3:4746021-4746040 Msa1271280:intron 10.0%
!!! AAATTTACAAACTTTTTTTA+GGG - chr8_3:4746228-4746247 None:intergenic 10.0%
!!! AAAATTTACAAACTTTTTTT+AGG - chr8_3:4746229-4746248 None:intergenic 10.0%
!!! TAAAAAAAGTTTGTAAATTT+TGG + chr8_3:4746228-4746247 Msa1271280:intron 10.0%
!!! TTTAAAATATTGTTTGTTTA+TGG + chr8_3:4748943-4748962 Msa1271280:intron 10.0%
!! TTAAAATATTGTTTGTTTAT+GGG + chr8_3:4748944-4748963 Msa1271280:intron 10.0%
!! ATTTGAATATGAAAAATTTA+AGG + chr8_3:4751949-4751968 Msa1271280:intron 10.0%
!!! TTTCAATTCTTATTCTATTT+TGG + chr8_3:4745244-4745263 Msa1271280:intron 15.0%
!! ACAAATCAAGAATATATAAA+TGG - chr8_3:4745423-4745442 None:intergenic 15.0%
!! CAAATATAATATGAATATCT+TGG - chr8_3:4745742-4745761 None:intergenic 15.0%
!! CAAGATATTCATATTATATT+TGG + chr8_3:4745740-4745759 Msa1271280:intron 15.0%
!!! AATAAGCTTAATTGTATTTT+TGG + chr8_3:4746075-4746094 Msa1271280:intron 15.0%
!!! AATTTACAAACTTTTTTTAG+GGG - chr8_3:4746227-4746246 None:intergenic 15.0%
!! AAAACTATGATTAGAAAATA+TGG + chr8_3:4746430-4746449 Msa1271280:intron 15.0%
!! AAACTATGATTAGAAAATAT+GGG + chr8_3:4746431-4746450 Msa1271280:intron 15.0%
!!! ATTATACATTTTTAAGTTTC+TGG - chr8_3:4748274-4748293 None:intergenic 15.0%
!! ATACAGAAAAATTATATTTG+AGG + chr8_3:4749221-4749240 Msa1271280:intron 15.0%
!!! GTGTTAATATAATTCATTTT+TGG - chr8_3:4749381-4749400 None:intergenic 15.0%
!!! GTTATCTGAAATAAATTTAA+AGG - chr8_3:4751713-4751732 None:intergenic 15.0%
!! TAATGACAAAACATATGTAA+GGG - chr8_3:4745301-4745320 None:intergenic 20.0%
!! TGGACACAAAATTATATATA+AGG - chr8_3:4745403-4745422 None:intergenic 20.0%
!! TTATAAGATAAGATAGGTAA+TGG + chr8_3:4746027-4746046 Msa1271280:intron 20.0%
!! TTTCGTAAACATGATAAAAT+AGG - chr8_3:4746106-4746125 None:intergenic 20.0%
!!! CCAAAACTTTGATTTAAAAA+GGG - chr8_3:4746136-4746155 None:intergenic 20.0%
!!! ACCAAAACTTTGATTTAAAA+AGG - chr8_3:4746137-4746156 None:intergenic 20.0%
!!! ATTTACAAACTTTTTTTAGG+GGG - chr8_3:4746226-4746245 None:intergenic 20.0%
!!! AAAAGAAAATACCATTTTTG+GGG - chr8_3:4746254-4746273 None:intergenic 20.0%
!!! GAAAAGAAAATACCATTTTT+GGG - chr8_3:4746255-4746274 None:intergenic 20.0%
!!! TGAAAAGAAAATACCATTTT+TGG - chr8_3:4746256-4746275 None:intergenic 20.0%
!!! TCTTTTCATTTTCAAAATTC+AGG + chr8_3:4746268-4746287 Msa1271280:intron 20.0%
!! TCAACTAAAATGTAATCAAT+TGG + chr8_3:4746585-4746604 Msa1271280:intron 20.0%
!!! ATACAAGTATTAAAGTGTTT+TGG + chr8_3:4746653-4746672 Msa1271280:intron 20.0%
!!! AATTTTTCTTTGCTTATGTT+GGG - chr8_3:4747084-4747103 None:intergenic 20.0%
!!! AAATTTTTCTTTGCTTATGT+TGG - chr8_3:4747085-4747104 None:intergenic 20.0%
!!! AAGAAATATTATTTTGTGAG+TGG + chr8_3:4747474-4747493 Msa1271280:five_prime_UTR 20.0%
!!! TTTATCAGAATGTTTTTTCT+TGG - chr8_3:4747535-4747554 None:intergenic 20.0%
!! GAAACATAATTGCATATATA+AGG - chr8_3:4747927-4747946 None:intergenic 20.0%
!! ATAAGCATTATCAGAATATT+TGG + chr8_3:4748117-4748136 Msa1271280:five_prime_UTR 20.0%
!! ACTTAAAAATGTATAATCCA+TGG + chr8_3:4748277-4748296 Msa1271280:five_prime_UTR 20.0%
!!! TTTATAGTTTTTGTTGTTGT+TGG + chr8_3:4748350-4748369 Msa1271280:five_prime_UTR 20.0%
!! TGTACGAATTAAAGAATAAA+TGG + chr8_3:4748399-4748418 Msa1271280:five_prime_UTR 20.0%
!! TTATATAAATTTGGGTCATT+GGG - chr8_3:4748710-4748729 None:intergenic 20.0%
!! TTTATATAAATTTGGGTCAT+TGG - chr8_3:4748711-4748730 None:intergenic 20.0%
!!! TTGTCAACTTTTTTTTTTCA+GGG - chr8_3:4749002-4749021 None:intergenic 20.0%
!!! ATTGTCAACTTTTTTTTTTC+AGG - chr8_3:4749003-4749022 None:intergenic 20.0%
!!! GAAAATAATTGCTTTTTCAA+AGG + chr8_3:4749118-4749137 Msa1271280:intron 20.0%
!!! AAGTTAAACTTTATTCCTTT+TGG - chr8_3:4749585-4749604 None:intergenic 20.0%
!! ATTTGTTTACAAAAAGAGTA+TGG - chr8_3:4750608-4750627 None:intergenic 20.0%
!!! CTCTTTTGAATAAATTCTTT+TGG - chr8_3:4750679-4750698 None:intergenic 20.0%
!! CAAAAGAATTTATTCAAAAG+AGG + chr8_3:4750677-4750696 Msa1271280:intron 20.0%
!! AATAGAAGAGATTATATATG+AGG + chr8_3:4750703-4750722 Msa1271280:intron 20.0%
!! ATAGAAGAGATTATATATGA+GGG + chr8_3:4750704-4750723 Msa1271280:intron 20.0%
!! TTAATAAAAGATTGTCTAGT+TGG - chr8_3:4750823-4750842 None:intergenic 20.0%
!!! GAATTTTCTTAAAAGTATGT+TGG - chr8_3:4750993-4751012 None:intergenic 20.0%
!! AACAAAAAAAAAAGGAGAAA+GGG + chr8_3:4751220-4751239 Msa1271280:intron 20.0%
!! TTACTAGAGTAGTATAAATA+GGG + chr8_3:4751543-4751562 Msa1271280:intron 20.0%
!! TGTATATGAAAAATGATTGA+AGG + chr8_3:4751880-4751899 Msa1271280:intron 20.0%
!! GTTCTTAGTGTTTAAATTTA+TGG - chr8_3:4751907-4751926 None:intergenic 20.0%
!! GAAACATAATTGCATATATA+AGG - chr8_3:4747927-4747946 None:intergenic 20.0%
!! ATAAGCATTATCAGAATATT+TGG + chr8_3:4748117-4748136 Msa1271280:five_prime_UTR 20.0%
!! ACTTAAAAATGTATAATCCA+TGG + chr8_3:4748277-4748296 Msa1271280:five_prime_UTR 20.0%
!!! TTTATAGTTTTTGTTGTTGT+TGG + chr8_3:4748350-4748369 Msa1271280:five_prime_UTR 20.0%
!! TGTACAAATTAAGGAATAAA+TGG + chr8_3:4752488-4752507 Msa1271280:intron 20.0%
!! AATAATGTTATGATGTTGAA+GGG + chr8_3:4752578-4752597 Msa1271280:intron 20.0%
!!! CTAATATAAATGTTGTTTGA+GGG - chr8_3:4752863-4752882 None:intergenic 20.0%
!!! TCTAATATAAATGTTGTTTG+AGG - chr8_3:4752864-4752883 None:intergenic 20.0%
!! TGAATGAACATTATAATAAC+TGG + chr8_3:4753325-4753344 Msa1271280:CDS 20.0%
! CTAATGACAAAACATATGTA+AGG - chr8_3:4745302-4745321 None:intergenic 25.0%
! GATTCATTGTTTCATATGAT+AGG + chr8_3:4745499-4745518 Msa1271280:intron 25.0%
! TAGTGTGATTGATAAAAACA+AGG + chr8_3:4745576-4745595 Msa1271280:intron 25.0%
! AGTGTGATTGATAAAAACAA+GGG + chr8_3:4745577-4745596 Msa1271280:intron 25.0%
! TTGTGCTCACAAAAATTATT+TGG + chr8_3:4745877-4745896 Msa1271280:intron 25.0%
! GTAAACATGATAAAATAGGA+CGG - chr8_3:4746102-4746121 None:intergenic 25.0%
!! CCCTTTTTAAATCAAAGTTT+TGG + chr8_3:4746133-4746152 Msa1271280:intron 25.0%
!! ATTCTCATTTATTGGCATTT+TGG + chr8_3:4746163-4746182 Msa1271280:intron 25.0%
!!! AGACTTTTAGCTTGTAAAAA+TGG - chr8_3:4746297-4746316 None:intergenic 25.0%
!! ATAGTTCTCCTTAAACTTTT+TGG - chr8_3:4746361-4746380 None:intergenic 25.0%
!! AAGTTTAAGGAGAACTATTT+TGG + chr8_3:4746363-4746382 Msa1271280:intron 25.0%
! TAGGGGAATAAAAAAATAGA+TGG + chr8_3:4746400-4746419 Msa1271280:intron 25.0%
!! TATGTGTAAGTGAATGTTTT+GGG - chr8_3:4746486-4746505 None:intergenic 25.0%
!! TTATGTGTAAGTGAATGTTT+TGG - chr8_3:4746487-4746506 None:intergenic 25.0%
! TTATCACTTATTGCAATGAT+GGG - chr8_3:4746551-4746570 None:intergenic 25.0%
! TTTATCACTTATTGCAATGA+TGG - chr8_3:4746552-4746571 None:intergenic 25.0%
! TCATTGCAATAAGTGATAAA+AGG + chr8_3:4746552-4746571 Msa1271280:intron 25.0%
! CACAGGGAAAAATAATATTA+TGG + chr8_3:4746705-4746724 Msa1271280:intron 25.0%
!! ATCTGAAACTGAATATGAAA+TGG + chr8_3:4746756-4746775 Msa1271280:five_prime_UTR 25.0%
! CATAAGCAAAGAAAAATTTG+TGG + chr8_3:4747086-4747105 Msa1271280:five_prime_UTR 25.0%
!! ATTTGTGGAAACAATTTTGT+TGG + chr8_3:4747101-4747120 Msa1271280:five_prime_UTR 25.0%
! ATGTTTCAATCTAAATGACT+TGG - chr8_3:4747211-4747230 None:intergenic 25.0%
!! CAAGATCAAGAAAACTTTTA+TGG - chr8_3:4747374-4747393 None:intergenic 25.0%
! ATCAAATCAGTGAAATGTTT+AGG - chr8_3:4747588-4747607 None:intergenic 25.0%
!!! AACATTTCACTGATTTGATA+AGG + chr8_3:4747589-4747608 Msa1271280:five_prime_UTR 25.0%
! ATTAACTTTGTTACTGTTCT+TGG - chr8_3:4747675-4747694 None:intergenic 25.0%
! GTAACAAAGTTAATAGATTC+TGG + chr8_3:4747681-4747700 Msa1271280:five_prime_UTR 25.0%
! TATGATAATAATGCAAACCA+TGG - chr8_3:4748297-4748316 None:intergenic 25.0%
! GTAATGTAAGTATTAAACTC+TGG + chr8_3:4748441-4748460 Msa1271280:five_prime_UTR 25.0%
! AACAATGTTATGATGTTGAA+GGG + chr8_3:4748492-4748511 Msa1271280:five_prime_UTR 25.0%
! ATGAGAAGATTATGTAATGA+AGG + chr8_3:4748526-4748545 Msa1271280:exon 25.0%
!!! TAAGGTTTTAAATTGAGTTG+CGG + chr8_3:4748558-4748577 Msa1271280:intron 25.0%
! TATATAAATTTGGGTCATTG+GGG - chr8_3:4748709-4748728 None:intergenic 25.0%
!!! CATTTTTGTTTAATGACACA+TGG + chr8_3:4748740-4748759 Msa1271280:intron 25.0%
!! GATTTTTCTTTTCTTCTCAT+GGG - chr8_3:4748803-4748822 None:intergenic 25.0%
!! TGATTTTTCTTTTCTTCTCA+TGG - chr8_3:4748804-4748823 None:intergenic 25.0%
!! CTGATATAAATGTTGTTTGA+GGG - chr8_3:4748851-4748870 None:intergenic 25.0%
!! TCTGATATAAATGTTGTTTG+AGG - chr8_3:4748852-4748871 None:intergenic 25.0%
!!! ATTATTTTAAGCTAATGCAG+TGG - chr8_3:4748920-4748939 None:intergenic 25.0%
!! TCTTTGATCACTTTAGAAAA+AGG + chr8_3:4749045-4749064 Msa1271280:intron 25.0%
! TGAATGTTATGTTGAATATG+TGG + chr8_3:4749286-4749305 Msa1271280:intron 25.0%
!!! TGTGTTTTTGTAAACTTTAG+TGG - chr8_3:4749451-4749470 None:intergenic 25.0%
!! GAGAATGTAAATTTTGTCTT+AGG - chr8_3:4749550-4749569 None:intergenic 25.0%
!! TTAAACTTTATTCCTTTTGG+TGG - chr8_3:4749582-4749601 None:intergenic 25.0%
! TTAACTTTATCCAACAACTA+AGG + chr8_3:4749598-4749617 Msa1271280:intron 25.0%
! AAATGATATGAAAGATGATG+TGG + chr8_3:4749754-4749773 Msa1271280:intron 25.0%
! ATGTAATAGCAGATTTAATG+TGG - chr8_3:4750008-4750027 None:intergenic 25.0%
!! ATAGGTTAAACACGTATTTT+TGG - chr8_3:4750344-4750363 None:intergenic 25.0%
! GAGATTGTAAAAATATGTGA+TGG - chr8_3:4750423-4750442 None:intergenic 25.0%
!! ACATTGCTCTTTTATGTAAA+TGG - chr8_3:4750553-4750572 None:intergenic 25.0%
!!! TGAATAAATTCTTTTGGTGT+GGG - chr8_3:4750673-4750692 None:intergenic 25.0%
!! TTGAATAAATTCTTTTGGTG+TGG - chr8_3:4750674-4750693 None:intergenic 25.0%
! AAGAAGAAAATAACATAGAC+AGG + chr8_3:4750734-4750753 Msa1271280:intron 25.0%
! CAGAATTAAGAAGAATCAAA+TGG + chr8_3:4750771-4750790 Msa1271280:intron 25.0%
!!! AGTTGTTTTCTTTCATTTGT+TGG - chr8_3:4750797-4750816 None:intergenic 25.0%
!! ACAACTTTGAGTTATAAAGT+GGG - chr8_3:4750929-4750948 None:intergenic 25.0%
!!! TCTTAAAAGTATGTTGGTTT+AGG - chr8_3:4750987-4751006 None:intergenic 25.0%
!!! CGATGATATGTTACTTTTTA+GGG - chr8_3:4751089-4751108 None:intergenic 25.0%
!!! TCGATGATATGTTACTTTTT+AGG - chr8_3:4751090-4751109 None:intergenic 25.0%
!!! CTTTCTCCTTTTTTTTTTGT+TGG - chr8_3:4751221-4751240 None:intergenic 25.0%
! CAACAAAAAAAAAAGGAGAA+AGG + chr8_3:4751219-4751238 Msa1271280:intron 25.0%
! ACAAAAAAAAAAGGAGAAAG+GGG + chr8_3:4751221-4751240 Msa1271280:intron 25.0%
! AAAGATAGACATATTCTTGA+TGG - chr8_3:4751307-4751326 None:intergenic 25.0%
! CTTTATTCTGTATAAAATCC+TGG - chr8_3:4751401-4751420 None:intergenic 25.0%
! CTATTTATACTACTCTAGTA+AGG - chr8_3:4751544-4751563 None:intergenic 25.0%
! CTTACTAGAGTAGTATAAAT+AGG + chr8_3:4751542-4751561 Msa1271280:intron 25.0%
!! GTAATTTTACCAAAGCTTTT+TGG - chr8_3:4751681-4751700 None:intergenic 25.0%
!! ATATTTCATGTTTGTCCTTT+TGG + chr8_3:4751819-4751838 Msa1271280:intron 25.0%
! TATGATAATAATGCAAACCA+TGG - chr8_3:4748297-4748316 None:intergenic 25.0%
! TGTTTACTCTGTACAAATTA+AGG + chr8_3:4752479-4752498 Msa1271280:intron 25.0%
! GTAATGTAAGTATTAAACTC+TGG + chr8_3:4748441-4748460 Msa1271280:five_prime_UTR 25.0%
! CATTATTCGTAATATTGTAG+TGG - chr8_3:4752565-4752584 None:intergenic 25.0%
! GAATAATGTTATGATGTTGA+AGG + chr8_3:4752577-4752596 Msa1271280:intron 25.0%
!!! CATTTTTGTTTAATGACACA+TGG + chr8_3:4748740-4748759 Msa1271280:intron 25.0%
!! GATTTTTCTTTTCTTCTCAT+GGG - chr8_3:4748803-4748822 None:intergenic 25.0%
!! TGATTTTTCTTTTCTTCTCA+TGG - chr8_3:4748804-4748823 None:intergenic 25.0%
!!! AATATTTTAAGCTAATGCAG+TGG - chr8_3:4752932-4752951 None:intergenic 25.0%
!! GATTCGACAAATTTAAAACA+TGG - chr8_3:4753021-4753040 None:intergenic 25.0%
! TTGTTATGGAAAGATCATTA+AGG + chr8_3:4753299-4753318 Msa1271280:CDS 25.0%
! ATGAACATTATAATAACTGG+TGG + chr8_3:4753328-4753347 Msa1271280:CDS 25.0%
! AACATTATATGGGAATGTTA+AGG + chr8_3:4753352-4753371 Msa1271280:CDS 25.0%
!! GTCAATTTTCTTAGAGTTAT+TGG + chr8_3:4753447-4753466 Msa1271280:CDS 25.0%
! AACATAGATTTTGAACCTGT+TGG - chr8_3:4745208-4745227 None:intergenic 30.0%
!! TGAGCACAACATAATTTGTT+TGG - chr8_3:4745866-4745885 None:intergenic 30.0%
GTCTCTCAATTCTCATTTAT+TGG + chr8_3:4746155-4746174 Msa1271280:intron 30.0%
!!! CTTTTAGCTTGTAAAAATGG+TGG - chr8_3:4746294-4746313 None:intergenic 30.0%
TGCAACATAAGTGATATTTG+AGG + chr8_3:4746333-4746352 Msa1271280:intron 30.0%
GCAACATAAGTGATATTTGA+GGG + chr8_3:4746334-4746353 Msa1271280:intron 30.0%
TTTGGTAAGCGTGATAAAAT+AGG + chr8_3:4746381-4746400 Msa1271280:intron 30.0%
TTGGTAAGCGTGATAAAATA+GGG + chr8_3:4746382-4746401 Msa1271280:intron 30.0%
!!! ATGTTTTGGGATGATATCTT+AGG - chr8_3:4746473-4746492 None:intergenic 30.0%
!! AATGATGGGAATGTTTTGAA+AGG - chr8_3:4746537-4746556 None:intergenic 30.0%
!! AAGCTTCTTGTTTCACTTTT+CGG - chr8_3:4746861-4746880 None:intergenic 30.0%
ACTCCTCAATTAATCTCAAT+TGG + chr8_3:4746883-4746902 Msa1271280:five_prime_UTR 30.0%
! TCTTTATTTCCAAGGTGAAT+TGG - chr8_3:4746910-4746929 None:intergenic 30.0%
! GTTGAAGTTCTTTATTTCCA+AGG - chr8_3:4746918-4746937 None:intergenic 30.0%
!!! CTTTTTTTGTGTTGTTGCAT+TGG - chr8_3:4746940-4746959 None:intergenic 30.0%
CAATGCAACAACACAAAAAA+AGG + chr8_3:4746938-4746957 Msa1271280:five_prime_UTR 30.0%
! TTTTGTTAAGAAACCGTTCA+TGG + chr8_3:4747145-4747164 Msa1271280:five_prime_UTR 30.0%
ATTACATTCTAACACAAGCT+TGG + chr8_3:4747238-4747257 Msa1271280:five_prime_UTR 30.0%
AGATTCATCAGCACAAAAAA+AGG - chr8_3:4747312-4747331 None:intergenic 30.0%
! TATTTTGTGAGTGGCTTAAT+TGG + chr8_3:4747483-4747502 Msa1271280:five_prime_UTR 30.0%
AATCTATGAGCAATAACCAT+AGG + chr8_3:4747553-4747572 Msa1271280:five_prime_UTR 30.0%
!! TTAACGGATTTAGAAAAGAG+TGG + chr8_3:4747633-4747652 Msa1271280:five_prime_UTR 30.0%
CAGAGAAAATAACTCAGAAA+TGG - chr8_3:4747765-4747784 None:intergenic 30.0%
TGGTTCAAACATGAAAATGA+AGG - chr8_3:4747801-4747820 None:intergenic 30.0%
! ACACAACAGAATGTGTTTTA+AGG + chr8_3:4747862-4747881 Msa1271280:five_prime_UTR 30.0%
TTGATACTGACATTGTTCTA+GGG - chr8_3:4747898-4747917 None:intergenic 30.0%
AATCAACATCAACTTGTGTA+TGG - chr8_3:4747968-4747987 None:intergenic 30.0%
!! ACAAGTTGATGTTGATTTGT+TGG + chr8_3:4747971-4747990 Msa1271280:five_prime_UTR 30.0%
CATTGTTCGTAATATTGTAG+TGG - chr8_3:4748479-4748498 None:intergenic 30.0%
GAACAATGTTATGATGTTGA+AGG + chr8_3:4748491-4748510 Msa1271280:five_prime_UTR 30.0%
AAGATTATGTAATGAAGGTG+AGG + chr8_3:4748531-4748550 Msa1271280:intron 30.0%
AGATTATGTAATGAAGGTGA+GGG + chr8_3:4748532-4748551 Msa1271280:intron 30.0%
CGTAAATTTGTAGAGAGAAT+TGG + chr8_3:4748590-4748609 Msa1271280:intron 30.0%
TAATGACACATGGAATTATG+AGG + chr8_3:4748750-4748769 Msa1271280:intron 30.0%
AATGACACATGGAATTATGA+GGG + chr8_3:4748751-4748770 Msa1271280:intron 30.0%
! GTGTTGTTGATCAAAGATTT+AGG + chr8_3:4749308-4749327 Msa1271280:intron 30.0%
! TGCAAAAGAGACTAATTTGT+TGG - chr8_3:4749403-4749422 None:intergenic 30.0%
AAAAACACAATCGAGTCATA+AGG + chr8_3:4749462-4749481 Msa1271280:intron 30.0%
TCAATGCTCAAACAAGTAAA+CGG + chr8_3:4749502-4749521 Msa1271280:intron 30.0%
TTTATCCAACAACTAAGGTA+TGG + chr8_3:4749603-4749622 Msa1271280:intron 30.0%
GCAAATATAGAAACCTTCAA+GGG + chr8_3:4749970-4749989 Msa1271280:intron 30.0%
AGATTTAATGTGGCAAAGAT+AGG - chr8_3:4749998-4750017 None:intergenic 30.0%
ATCCAAAGTATAAGACTCTT+GGG + chr8_3:4750026-4750045 Msa1271280:intron 30.0%
ATACTCATTCTTAAGATCAG+TGG - chr8_3:4750113-4750132 None:intergenic 30.0%
TGATGATTGTATCTCAAACA+AGG - chr8_3:4750373-4750392 None:intergenic 30.0%
! GTAAAAATATGTGATGGTGT+TGG - chr8_3:4750417-4750436 None:intergenic 30.0%
!! AAATGGTGTTGGTGATAAAT+GGG - chr8_3:4750536-4750555 None:intergenic 30.0%
!! TAAATGGTGTTGGTGATAAA+TGG - chr8_3:4750537-4750556 None:intergenic 30.0%
! CTCTTTTATGTAAATGGTGT+TGG - chr8_3:4750547-4750566 None:intergenic 30.0%
! GTTTACAAAAAGAGTATGGA+AGG - chr8_3:4750604-4750623 None:intergenic 30.0%
CATAAGAAAACTTCTTGGAT+TGG - chr8_3:4750641-4750660 None:intergenic 30.0%
AGGATCATAAGAAAACTTCT+TGG - chr8_3:4750646-4750665 None:intergenic 30.0%
! TTTGAGTTATAAAGTGGGAA+AGG - chr8_3:4750924-4750943 None:intergenic 30.0%
! GACAACTTTGAGTTATAAAG+TGG - chr8_3:4750930-4750949 None:intergenic 30.0%
!!! ACTTTTTAGGGTCAAAAGAT+GGG - chr8_3:4751077-4751096 None:intergenic 30.0%
!!! TACTTTTTAGGGTCAAAAGA+TGG - chr8_3:4751078-4751097 None:intergenic 30.0%
TGAAGATGGGAAATAATAGT+TGG + chr8_3:4751115-4751134 Msa1271280:intron 30.0%
!! TTGAGTCCAATATTTTTACC+GGG - chr8_3:4751162-4751181 None:intergenic 30.0%
!! GTTGAGTCCAATATTTTTAC+CGG - chr8_3:4751163-4751182 None:intergenic 30.0%
AAAAATATTGGACTCAACCA+TGG + chr8_3:4751165-4751184 Msa1271280:intron 30.0%
! TAGAAAAGAGGTTTAAGACA+AGG - chr8_3:4751251-4751270 None:intergenic 30.0%
ATGTCTATCTTTAACAATCG+CGG + chr8_3:4751315-4751334 Msa1271280:intron 30.0%
TTGATACTGACATTGTTCTA+GGG - chr8_3:4747898-4747917 None:intergenic 30.0%
AATCAACATCAACTTGTGTA+TGG - chr8_3:4747968-4747987 None:intergenic 30.0%
!! ACAAGTTGATGTTGATTTGT+TGG + chr8_3:4747971-4747990 Msa1271280:five_prime_UTR 30.0%
AAGATTATGTAATGAACGTG+AGG + chr8_3:4752619-4752638 Msa1271280:intron 30.0%
AGATTATGTAATGAACGTGA+GGG + chr8_3:4752620-4752639 Msa1271280:intron 30.0%
TAATGACACATGGAATTATG+AGG + chr8_3:4748750-4748769 Msa1271280:intron 30.0%
AATGACACATGGAATTATGA+GGG + chr8_3:4748751-4748770 Msa1271280:intron 30.0%
GAAACATAGTTGCATATGAA+AGG - chr8_3:4753138-4753157 None:intergenic 30.0%
TAACTGGTGGAAACATTATA+TGG + chr8_3:4753341-4753360 Msa1271280:CDS 30.0%
AACTGGTGGAAACATTATAT+GGG + chr8_3:4753342-4753361 Msa1271280:CDS 30.0%
TTATATGGGAATGTTAAGGT+CGG + chr8_3:4753356-4753375 Msa1271280:CDS 30.0%
ATTTGTCACCAGGTATACTA+TGG - chr8_3:4745146-4745165 None:intergenic 35.0%
! TAGATTTTGAACCTGTTGGT+TGG - chr8_3:4745204-4745223 None:intergenic 35.0%
TTCCCTTATTATACACTAGC+TGG + chr8_3:4745363-4745382 Msa1271280:intron 35.0%
CTCCAGCTAGTGTATAATAA+GGG - chr8_3:4745368-4745387 None:intergenic 35.0%
ACTCCAGCTAGTGTATAATA+AGG - chr8_3:4745369-4745388 None:intergenic 35.0%
TGCATGTGATTGTTCACTTT+AGG + chr8_3:4745455-4745474 Msa1271280:intron 35.0%
ATTGTTCACTTTAGGCCATT+TGG + chr8_3:4745463-4745482 Msa1271280:intron 35.0%
TTGTTCACTTTAGGCCATTT+GGG + chr8_3:4745464-4745483 Msa1271280:intron 35.0%
TACCAATTACCAAGTCATGA+AGG + chr8_3:4745524-4745543 Msa1271280:intron 35.0%
!! ATCCTTCATGACTTGGTAAT+TGG - chr8_3:4745529-4745548 None:intergenic 35.0%
GGTTTAAATCCTTCATGACT+TGG - chr8_3:4745536-4745555 None:intergenic 35.0%
TGTTTCGTTAACTAATGCTC+TGG - chr8_3:4745621-4745640 None:intergenic 35.0%
!! TATTTTTGCCCCCTAAATGA+TGG + chr8_3:4746196-4746215 Msa1271280:intron 35.0%
!! GTAAATTTTGGCCCCAAAAA+TGG + chr8_3:4746240-4746259 Msa1271280:intron 35.0%
TTGAGGGACCAAAAAGTTTA+AGG + chr8_3:4746350-4746369 Msa1271280:intron 35.0%
TGGTAAGCGTGATAAAATAG+GGG + chr8_3:4746383-4746402 Msa1271280:intron 35.0%
! TTTGGGATGATATCTTAGGT+CGG - chr8_3:4746469-4746488 None:intergenic 35.0%
!!! ATGGGAATGTTTTGAAAGGT+AGG - chr8_3:4746533-4746552 None:intergenic 35.0%
CTGCTAAACTTAACTCTTCT+AGG - chr8_3:4746807-4746826 None:intergenic 35.0%
GGACCAATTGAGATTAATTG+AGG - chr8_3:4746889-4746908 None:intergenic 35.0%
ATAGACGCTCATAGAAGAAA+TGG - chr8_3:4746969-4746988 None:intergenic 35.0%
GACTTTGTAGTTCTTGATCA+TGG - chr8_3:4747010-4747029 None:intergenic 35.0%
AAGAAACCGTTCATGGAAAT+CGG + chr8_3:4747152-4747171 Msa1271280:five_prime_UTR 35.0%
ATGTATCCGATTTCCATGAA+CGG - chr8_3:4747161-4747180 None:intergenic 35.0%
!!! CTTCTTTTTTGTCGTCGTTA+GGG - chr8_3:4747350-4747369 None:intergenic 35.0%
!!! TCTTCTTTTTTGTCGTCGTT+AGG - chr8_3:4747351-4747370 None:intergenic 35.0%
!! ACGTGAAACTAAGCTTGTTT+TGG + chr8_3:4747437-4747456 Msa1271280:five_prime_UTR 35.0%
!! TTAATTGGTGATGTTGGTAG+TGG + chr8_3:4747498-4747517 Msa1271280:five_prime_UTR 35.0%
AGCAATAACCATAGGTTTCA+AGG + chr8_3:4747561-4747580 Msa1271280:five_prime_UTR 35.0%
! TTACCTTCCAGCTGATTTAA+CGG + chr8_3:4747617-4747636 Msa1271280:five_prime_UTR 35.0%
TCTAAATCCGTTAAATCAGC+TGG - chr8_3:4747627-4747646 None:intergenic 35.0%
!!! TGTGAGTTTTGAGAAAGTTG+TGG + chr8_3:4747704-4747723 Msa1271280:five_prime_UTR 35.0%
!!! GTGAGTTTTGAGAAAGTTGT+GGG + chr8_3:4747705-4747724 Msa1271280:five_prime_UTR 35.0%
!!! TGAGTTTTGAGAAAGTTGTG+GGG + chr8_3:4747706-4747725 Msa1271280:five_prime_UTR 35.0%
!! CTGAGTTATTTTCTCTGCTT+AGG + chr8_3:4747768-4747787 Msa1271280:five_prime_UTR 35.0%
CTTGATACTGACATTGTTCT+AGG - chr8_3:4747899-4747918 None:intergenic 35.0%
!! AGTTGATGTTGATTTGTTGG+TGG + chr8_3:4747974-4747993 Msa1271280:five_prime_UTR 35.0%
GAAGTGATTGTGCATGAAAT+GGG + chr8_3:4748002-4748021 Msa1271280:five_prime_UTR 35.0%
AATGGGAAGTGATAAAGAAG+TGG + chr8_3:4748019-4748038 Msa1271280:five_prime_UTR 35.0%
TGGTCTTTGTAAACATGTTG+TGG + chr8_3:4748055-4748074 Msa1271280:five_prime_UTR 35.0%
!! TGGTGTATTTTAGAGATGCT+TGG + chr8_3:4748165-4748184 Msa1271280:five_prime_UTR 35.0%
GATTATGTAATGAAGGTGAG+GGG + chr8_3:4748533-4748552 Msa1271280:intron 35.0%
AATTTGAATCAGAACGCAAG+CGG + chr8_3:4748620-4748639 Msa1271280:intron 35.0%
ATGACACATGGAATTATGAG+GGG + chr8_3:4748752-4748771 Msa1271280:intron 35.0%
TATTGTTTGTTTATGGGACC+TGG + chr8_3:4748950-4748969 Msa1271280:intron 35.0%
GTTGATCAAAGATTTAGGTG+TGG + chr8_3:4749313-4749332 Msa1271280:intron 35.0%
! AATCGAGTCATAAGGCATTA+AGG + chr8_3:4749470-4749489 Msa1271280:intron 35.0%
!! TGTTTGAGCATTGACTAATG+TGG - chr8_3:4749496-4749515 None:intergenic 35.0%
CAATGCTCAAACAAGTAAAC+GGG + chr8_3:4749503-4749522 Msa1271280:intron 35.0%
TTGTCTTAGGCTATCATAGT+TGG - chr8_3:4749537-4749556 None:intergenic 35.0%
!! TTATTCCTTTTGGTGGATGA+AGG - chr8_3:4749575-4749594 None:intergenic 35.0%
GAATTCCATACCTTAGTTGT+TGG - chr8_3:4749611-4749630 None:intergenic 35.0%
! TATTTGGCTTCTGTGTGTTT+AGG - chr8_3:4749677-4749696 None:intergenic 35.0%
AAGCCAAATACACTGCAAAA+AGG + chr8_3:4749687-4749706 Msa1271280:intron 35.0%
!!! TTGGATTAGTTTTTCGTTGG+CGG - chr8_3:4749782-4749801 None:intergenic 35.0%
!!! GTCTTGGATTAGTTTTTCGT+TGG - chr8_3:4749785-4749804 None:intergenic 35.0%
! TTTATTTCCTGCGACACTTT+TGG - chr8_3:4749829-4749848 None:intergenic 35.0%
GTTACCAAGAAAGGCAAATT+TGG - chr8_3:4749929-4749948 None:intergenic 35.0%
TGAAGGTTTCTATATTTGCG+TGG - chr8_3:4749969-4749988 None:intergenic 35.0%
CGCAAATATAGAAACCTTCA+AGG + chr8_3:4749969-4749988 Msa1271280:intron 35.0%
CATCCAAAGTATAAGACTCT+TGG + chr8_3:4750025-4750044 Msa1271280:intron 35.0%
! TTCCCAAGAGTCTTATACTT+TGG - chr8_3:4750031-4750050 None:intergenic 35.0%
ATTCTTAAGATCAGTGGCAA+TGG - chr8_3:4750107-4750126 None:intergenic 35.0%
!! TGGCTGATTTGTTCTCTTTA+GGG - chr8_3:4750239-4750258 None:intergenic 35.0%
GTTTAGGCGTTTATTCAACT+TGG - chr8_3:4750283-4750302 None:intergenic 35.0%
GATTGTATCTCAAACAAGGT+GGG - chr8_3:4750369-4750388 None:intergenic 35.0%
TGATTGTATCTCAAACAAGG+TGG - chr8_3:4750370-4750389 None:intergenic 35.0%
! AAAATATGTGATGGTGTTGG+TGG - chr8_3:4750414-4750433 None:intergenic 35.0%
GTAGGAGATTGAATGAAAGA+GGG - chr8_3:4750470-4750489 None:intergenic 35.0%
!! AATGGTGTTGGTGATAAATG+GGG - chr8_3:4750535-4750554 None:intergenic 35.0%
! AAAAAGAGTATGGAAGGTTG+GGG - chr8_3:4750598-4750617 None:intergenic 35.0%
! CAAAAAGAGTATGGAAGGTT+GGG - chr8_3:4750599-4750618 None:intergenic 35.0%
! ACAAAAAGAGTATGGAAGGT+TGG - chr8_3:4750600-4750619 None:intergenic 35.0%
ATAGACAGGCAGAAAAGTTA+TGG + chr8_3:4750748-4750767 Msa1271280:intron 35.0%
!!! CGTTTGTTGTTTTGGGATAA+GGG - chr8_3:4750858-4750877 None:intergenic 35.0%
!!! ACGTTTGTTGTTTTGGGATA+AGG - chr8_3:4750859-4750878 None:intergenic 35.0%
!!! AAAGGTGCCTTTTTGTACTT+GGG - chr8_3:4750906-4750925 None:intergenic 35.0%
!! AGGTCAATATTACTGACTCT+TGG - chr8_3:4750967-4750986 None:intergenic 35.0%
!!! GGTTGTTTTTGTGCTTTTTG+AGG - chr8_3:4751035-4751054 None:intergenic 35.0%
TATCATCGACAAACTGAAGA+TGG + chr8_3:4751101-4751120 Msa1271280:intron 35.0%
ATCATCGACAAACTGAAGAT+GGG + chr8_3:4751102-4751121 Msa1271280:intron 35.0%
! ATTTTTACCGGGTACAACAT+TGG - chr8_3:4751151-4751170 None:intergenic 35.0%
GTTGTACCCGGTAAAAATAT+TGG + chr8_3:4751153-4751172 Msa1271280:intron 35.0%
! GAATGTGATGATGAAATCCA+TGG - chr8_3:4751185-4751204 None:intergenic 35.0%
!!! TTTTTTTTGTTGGCTGCTGA+GGG - chr8_3:4751211-4751230 None:intergenic 35.0%
!!! TTTTTTTTTGTTGGCTGCTG+AGG - chr8_3:4751212-4751231 None:intergenic 35.0%
CAGCAGCCAACAAAAAAAAA+AGG + chr8_3:4751212-4751231 Msa1271280:intron 35.0%
AACATATTGTGCTCGGTTAT+AGG - chr8_3:4751364-4751383 None:intergenic 35.0%
GTTAGCAAACATATTGTGCT+CGG - chr8_3:4751371-4751390 None:intergenic 35.0%
!! TGTTTGCTAACAATTTTGCC+AGG + chr8_3:4751380-4751399 Msa1271280:intron 35.0%
TTGAAAGCGAAAACACTTGA+TGG - chr8_3:4751573-4751592 None:intergenic 35.0%
CCATATTCTAATGCTCCAAA+AGG - chr8_3:4751837-4751856 None:intergenic 35.0%
!!! CCTTTTGGAGCATTAGAATA+TGG + chr8_3:4751834-4751853 Msa1271280:intron 35.0%
CTTGATACTGACATTGTTCT+AGG - chr8_3:4747899-4747918 None:intergenic 35.0%
GAAGTGATTGTGCATGAAAT+GGG + chr8_3:4748002-4748021 Msa1271280:five_prime_UTR 35.0%
AATGGGAAGTGATAAAGAAG+TGG + chr8_3:4748019-4748038 Msa1271280:five_prime_UTR 35.0%
TGGTCTTTGTAAACATGTTG+TGG + chr8_3:4748055-4748074 Msa1271280:five_prime_UTR 35.0%
!! TGGTGTATTTTAGAGATGCT+TGG + chr8_3:4748165-4748184 Msa1271280:five_prime_UTR 35.0%
GATTATGTAATGAACGTGAG+GGG + chr8_3:4752621-4752640 Msa1271280:intron 35.0%
AATTTGAATCAGAACGCAAG+CGG + chr8_3:4748620-4748639 Msa1271280:intron 35.0%
TATAAATTTGGGAATGCCCT+CGG - chr8_3:4752719-4752738 None:intergenic 35.0%
ATGACACATGGAATTATGAG+GGG + chr8_3:4748752-4748771 Msa1271280:intron 35.0%
CACAAAAACCAGCTCAAAAT+CGG - chr8_3:4752985-4753004 None:intergenic 35.0%
TAAGAACACATTCTGTTGCT+TGG - chr8_3:4753074-4753093 None:intergenic 35.0%
AAGCAACAGAATGTGTTCTT+AGG + chr8_3:4753073-4753092 Msa1271280:CDS 35.0%
CATAGTTGCATATGAAAGGT+TGG - chr8_3:4753134-4753153 None:intergenic 35.0%
! ACATGAAGATGTTGAGTTGT+TGG + chr8_3:4753182-4753201 Msa1271280:CDS 35.0%
GAAATCATTAGCCATGAACT+TGG + chr8_3:4753213-4753232 Msa1271280:CDS 35.0%
! GAATTGGCAACATTGGTTAA+TGG + chr8_3:4753246-4753265 Msa1271280:CDS 35.0%
TGGTCTTTGCAAATATGTTG+TGG + chr8_3:4753266-4753285 Msa1271280:CDS 35.0%
GTGGTGACATCAAATTGTTA+TGG + chr8_3:4753285-4753304 Msa1271280:CDS 35.0%
AGAGTTAGTTCAACTGTTGT+TGG + chr8_3:4753399-4753418 Msa1271280:CDS 35.0%
GAACACAACCATAGTATACC+TGG + chr8_3:4745135-4745154 Msa1271280:five_prime_UTR 40.0%
CTTGAGCAATATTTGTCACC+AGG - chr8_3:4745156-4745175 None:intergenic 40.0%
ATTCCTATCTACCAACCAAC+AGG + chr8_3:4745190-4745209 Msa1271280:five_prime_UTR 40.0%
TCACTGATGAGTATCCCAAA+TGG - chr8_3:4745481-4745500 None:intergenic 40.0%
ACAACTACAGACACATCAAG+AGG - chr8_3:4745557-4745576 None:intergenic 40.0%
!! AACTAATGCTCTGGAACCAT+TGG - chr8_3:4745612-4745631 None:intergenic 40.0%
ATCGCAAACTGCAATGTAGA+CGG + chr8_3:4745820-4745839 Msa1271280:intron 40.0%
AGGGGGAAAACCATCATTTA+GGG - chr8_3:4746209-4746228 None:intergenic 40.0%
TAGGGGGAAAACCATCATTT+AGG - chr8_3:4746210-4746229 None:intergenic 40.0%
GATGATATCTTAGGTCGGTT+GGG - chr8_3:4746464-4746483 None:intergenic 40.0%
AAATGATCCTCACATGTCAC+AGG + chr8_3:4746688-4746707 Msa1271280:intron 40.0%
AATGATCCTCACATGTCACA+GGG + chr8_3:4746689-4746708 Msa1271280:intron 40.0%
! ATTTTTCCCTGTGACATGTG+AGG - chr8_3:4746698-4746717 None:intergenic 40.0%
!! TTCACTTTTCGGAGATTGTG+AGG - chr8_3:4746850-4746869 None:intergenic 40.0%
TCAATTGGTCCAATTCACCT+TGG + chr8_3:4746898-4746917 Msa1271280:five_prime_UTR 40.0%
!!! GTTGGATGCTGTTTTCATCA+TGG + chr8_3:4747119-4747138 Msa1271280:five_prime_UTR 40.0%
! CACAAGGGACTTGATTTTGT+TGG + chr8_3:4747275-4747294 Msa1271280:five_prime_UTR 40.0%
!! AGTGGCTTAATTGGTGATGT+TGG + chr8_3:4747492-4747511 Msa1271280:five_prime_UTR 40.0%
! GTTTAGGACCTTGAAACCTA+TGG - chr8_3:4747572-4747591 None:intergenic 40.0%
AATCCGTTAAATCAGCTGGA+AGG - chr8_3:4747623-4747642 None:intergenic 40.0%
!! TGTTGATTTGTTGGTGGAGA+AGG + chr8_3:4747980-4747999 Msa1271280:five_prime_UTR 40.0%
GGAAGTGATTGTGCATGAAA+TGG + chr8_3:4748001-4748020 Msa1271280:five_prime_UTR 40.0%
! GAATATTTGGAACCGTACCA+TGG + chr8_3:4748130-4748149 Msa1271280:five_prime_UTR 40.0%
!! TTGGAGAGCTAGTTCTACTT+TGG + chr8_3:4748184-4748203 Msa1271280:five_prime_UTR 40.0%
!! AGAGCTAGTTCTACTTTGGT+TGG + chr8_3:4748188-4748207 Msa1271280:five_prime_UTR 40.0%
TAATGAAGGTGAGGGGTTTA+AGG + chr8_3:4748540-4748559 Msa1271280:intron 40.0%
CCCTAGGATAAAACAAGCTA+GGG - chr8_3:4748665-4748684 None:intergenic 40.0%
!!! CCCTAGCTTGTTTTATCCTA+GGG + chr8_3:4748662-4748681 Msa1271280:intron 40.0%
ACCCTAGGATAAAACAAGCT+AGG - chr8_3:4748666-4748685 None:intergenic 40.0%
! ATGTTGTTTGAGGGAGTTCT+TGG - chr8_3:4748842-4748861 None:intergenic 40.0%
TTGTCACCTTGATTTCTACC+AGG - chr8_3:4748971-4748990 None:intergenic 40.0%
AGTAATAATTCGCAGTGTCG+TGG + chr8_3:4749091-4749110 Msa1271280:intron 40.0%
TTGAGGCTTATGATGAGAGA+TGG + chr8_3:4749238-4749257 Msa1271280:intron 40.0%
AAAGATTTAGGTGTGGAGCT+CGG + chr8_3:4749320-4749339 Msa1271280:intron 40.0%
TCTTAGGCTATCATAGTTGG+TGG - chr8_3:4749534-4749553 None:intergenic 40.0%
! GCTCCTTTTTGCAGTGTATT+TGG - chr8_3:4749693-4749712 None:intergenic 40.0%
TTTGGACGTTAGTTAGGTCT+TGG - chr8_3:4749801-4749820 None:intergenic 40.0%
GTTCTCTTTGGACGTTAGTT+AGG - chr8_3:4749807-4749826 None:intergenic 40.0%
ACCAAGAAAGGCAAATTTGG+TGG - chr8_3:4749926-4749945 None:intergenic 40.0%
!! GTGGCTGATTTGTTCTCTTT+AGG - chr8_3:4750240-4750259 None:intergenic 40.0%
! TTTTGGATTGATCCGTGGTT+AGG - chr8_3:4750327-4750346 None:intergenic 40.0%
!!! CGTATTTTTGGATTGATCCG+TGG - chr8_3:4750332-4750351 None:intergenic 40.0%
AGATTGAATGAAAGAGGGCA+GGG - chr8_3:4750465-4750484 None:intergenic 40.0%
GGTAGGAGATTGAATGAAAG+AGG - chr8_3:4750471-4750490 None:intergenic 40.0%
!! ATGGTGTTGGTGATAAATGG+GGG - chr8_3:4750534-4750553 None:intergenic 40.0%
! AAAAGAGTATGGAAGGTTGG+GGG - chr8_3:4750597-4750616 None:intergenic 40.0%
TCCCAAAACAACAAACGTCT+CGG + chr8_3:4750861-4750880 Msa1271280:intron 40.0%
!!! TCCGAGACGTTTGTTGTTTT+GGG - chr8_3:4750865-4750884 None:intergenic 40.0%
!!! ATCCGAGACGTTTGTTGTTT+TGG - chr8_3:4750866-4750885 None:intergenic 40.0%
!!! GAAAGGTGCCTTTTTGTACT+TGG - chr8_3:4750907-4750926 None:intergenic 40.0%
!! TACTGACTCTTGGTTGAATG+AGG - chr8_3:4750957-4750976 None:intergenic 40.0%
ATACATGCCAATGTTGTACC+CGG + chr8_3:4751141-4751160 Msa1271280:intron 40.0%
!!! TTTTTTTGTTGGCTGCTGAG+GGG - chr8_3:4751210-4751229 None:intergenic 40.0%
GGTGGATGAGTATAGAAAAG+AGG - chr8_3:4751263-4751282 None:intergenic 40.0%
TATCCTAGTTGTGAATGAGG+TGG - chr8_3:4751284-4751303 None:intergenic 40.0%
TGGTATCCTAGTTGTGAATG+AGG - chr8_3:4751287-4751306 None:intergenic 40.0%
TGCTTCTAGATCTTTCGAAG+TGG + chr8_3:4751516-4751535 Msa1271280:intron 40.0%
!! TGTTGATTTGTTGGTCGAGA+AGG + chr8_3:4752067-4752086 Msa1271280:intron 40.0%
GGAAGTGATTGTGCATGAAA+TGG + chr8_3:4748001-4748020 Msa1271280:five_prime_UTR 40.0%
GAAGTGGCAGTTCTTGTTAA+TGG + chr8_3:4752122-4752141 Msa1271280:CDS 40.0%
! GAATATTTGGAACCGTACCA+TGG + chr8_3:4748130-4748149 Msa1271280:five_prime_UTR 40.0%
!! TTGGAGAGCTAGTTCTACTT+TGG + chr8_3:4748184-4748203 Msa1271280:five_prime_UTR 40.0%
!! AGAGCTAGTTCTACTTTGGT+TGG + chr8_3:4748188-4748207 Msa1271280:five_prime_UTR 40.0%
TAATGAACGTGAGGGGTTTA+AGG + chr8_3:4752628-4752647 Msa1271280:intron 40.0%
! ATGTTGTTTGAGGGAGTTCT+TGG - chr8_3:4748842-4748861 None:intergenic 40.0%
!!! TTGAGCTGGTTTTTGTGCTT+AGG + chr8_3:4752988-4753007 Msa1271280:intron 40.0%
TCTACATTCAAATGCGGGAT+TGG - chr8_3:4753051-4753070 None:intergenic 40.0%
CTTGGTCTACATTCAAATGC+GGG - chr8_3:4753056-4753075 None:intergenic 40.0%
GCTTGGTCTACATTCAAATG+CGG - chr8_3:4753057-4753076 None:intergenic 40.0%
ACTTGGAAGTCATGCAGAAT+TGG + chr8_3:4753230-4753249 Msa1271280:CDS 40.0%
TCATGCAGAATTGGCAACAT+TGG + chr8_3:4753239-4753258 Msa1271280:CDS 40.0%
ACAGTTGAACTAACTCTCCA+AGG - chr8_3:4753396-4753415 None:intergenic 40.0%
!! GAACCTGTTGGTTGGTAGAT+AGG - chr8_3:4745196-4745215 None:intergenic 45.0%
CTACATTGCAGTTTGCGATG+TGG - chr8_3:4745819-4745838 None:intergenic 45.0%
GGGGAAAACCATCATTTAGG+GGG - chr8_3:4746207-4746226 None:intergenic 45.0%
GGGGGAAAACCATCATTTAG+GGG - chr8_3:4746208-4746227 None:intergenic 45.0%
GGATGATATCTTAGGTCGGT+TGG - chr8_3:4746465-4746484 None:intergenic 45.0%
AGCAGACTGTAGCATCTACA+AGG + chr8_3:4746822-4746841 Msa1271280:five_prime_UTR 45.0%
!! GCTCAGCAAAAGCATCACAA+GGG + chr8_3:4747260-4747279 Msa1271280:five_prime_UTR 45.0%
ACCATTTCAAAGCGCGTCTA+AGG + chr8_3:4747817-4747836 Msa1271280:five_prime_UTR 45.0%
!! TCCTTAGACGCGCTTTGAAA+TGG - chr8_3:4747821-4747840 None:intergenic 45.0%
TCTAAGGATTCCGCAGTTGA+AGG + chr8_3:4747833-4747852 Msa1271280:five_prime_UTR 45.0%
GTGTGATCAACCTTCAACTG+CGG - chr8_3:4747846-4747865 None:intergenic 45.0%
!! GACATTGTTCTAGGGCAATG+AGG - chr8_3:4747890-4747909 None:intergenic 45.0%
! GAAGTGGCAGTGCTTGTTAA+TGG + chr8_3:4748035-4748054 Msa1271280:five_prime_UTR 45.0%
AACTTTGTACGTCTTGCCAG+AGG + chr8_3:4748239-4748258 Msa1271280:five_prime_UTR 45.0%
! TTTCTGGTAGAAGAGACCTC+TGG - chr8_3:4748258-4748277 None:intergenic 45.0%
!!! GCCCTAGCTTGTTTTATCCT+AGG + chr8_3:4748661-4748680 Msa1271280:intron 45.0%
AAATTTGGGTCATTGGGGCT+TGG - chr8_3:4748704-4748723 None:intergenic 45.0%
GGGCTAGAGTACAGAAGTAA+CGG + chr8_3:4748772-4748791 Msa1271280:intron 45.0%
GGCTAGAGTACAGAAGTAAC+GGG + chr8_3:4748773-4748792 Msa1271280:intron 45.0%
GCTAGAGTACAGAAGTAACG+GGG + chr8_3:4748774-4748793 Msa1271280:intron 45.0%
ATGGGACCTGGTAGAAATCA+AGG + chr8_3:4748962-4748981 Msa1271280:intron 45.0%
TAATTCGCAGTGTCGTGGAT+TGG + chr8_3:4749096-4749115 Msa1271280:intron 45.0%
CTCTACCTTCATCCACCAAA+AGG + chr8_3:4749567-4749586 Msa1271280:intron 45.0%
!!! GCGACACTTTTGGTTCTCTT+TGG - chr8_3:4749819-4749838 None:intergenic 45.0%
!! AAGAGAACCAAAAGTGTCGC+AGG + chr8_3:4749819-4749838 Msa1271280:intron 45.0%
TGATTCAACACCTCCACAAC+CGG + chr8_3:4749861-4749880 Msa1271280:intron 45.0%
TACTATTGCATGACCGGTTG+TGG - chr8_3:4749877-4749896 None:intergenic 45.0%
ACAACCGGTCATGCAATAGT+AGG + chr8_3:4749876-4749895 Msa1271280:intron 45.0%
GATGCCTACTATTGCATGAC+CGG - chr8_3:4749883-4749902 None:intergenic 45.0%
GTCATGCAATAGTAGGCATC+TGG + chr8_3:4749883-4749902 Msa1271280:intron 45.0%
ATGCAATAGTAGGCATCTGG+AGG + chr8_3:4749886-4749905 Msa1271280:intron 45.0%
TGCAATAGTAGGCATCTGGA+GGG + chr8_3:4749887-4749906 Msa1271280:intron 45.0%
! AGAAAGGCAAATTTGGTGGC+CGG - chr8_3:4749922-4749941 None:intergenic 45.0%
GCCACCAAATTTGCCTTTCT+TGG + chr8_3:4749922-4749941 Msa1271280:intron 45.0%
TCGTGACAGGTTACCAAGAA+AGG - chr8_3:4749938-4749957 None:intergenic 45.0%
! TCTTGGTAACCTGTCACGAA+AGG + chr8_3:4749939-4749958 Msa1271280:intron 45.0%
! CTTGGTAACCTGTCACGAAA+GGG + chr8_3:4749940-4749959 Msa1271280:intron 45.0%
GCAAAGATAGGTTCCCTTGA+AGG - chr8_3:4749986-4750005 None:intergenic 45.0%
GTTGGGAGTTATTCTGTTCG+TGG - chr8_3:4750072-4750091 None:intergenic 45.0%
GAATAACTCCCAACGAGATC+AGG + chr8_3:4750078-4750097 Msa1271280:intron 45.0%
!! TCTCTTTAGGGTGTGTCGAA+GGG - chr8_3:4750227-4750246 None:intergenic 45.0%
!! TTCTCTTTAGGGTGTGTCGA+AGG - chr8_3:4750228-4750247 None:intergenic 45.0%
TGGAAATAAGTCGAGTACGG+TGG - chr8_3:4750259-4750278 None:intergenic 45.0%
GGCTGGAAATAAGTCGAGTA+CGG - chr8_3:4750262-4750281 None:intergenic 45.0%
AGGCGTTTATTCAACTTGGC+TGG - chr8_3:4750279-4750298 None:intergenic 45.0%
TCTCAAACAAGGTGGGAGAT+AGG - chr8_3:4750362-4750381 None:intergenic 45.0%
GAGATTGAATGAAAGAGGGC+AGG - chr8_3:4750466-4750485 None:intergenic 45.0%
AAATGGGGGTCTGTGGTTTA+GGG - chr8_3:4750520-4750539 None:intergenic 45.0%
TAAATGGGGGTCTGTGGTTT+AGG - chr8_3:4750521-4750540 None:intergenic 45.0%
GTTGGGGGTTAGGTATATGA+GGG - chr8_3:4750582-4750601 None:intergenic 45.0%
!! ATTCTTTTGGTGTGGGAGTG+AGG - chr8_3:4750666-4750685 None:intergenic 45.0%
AGGAAGGCCCAAGTACAAAA+AGG + chr8_3:4750896-4750915 Msa1271280:intron 45.0%
TGAGGTGATGTCAGGATTGA+AGG - chr8_3:4751017-4751036 None:intergenic 45.0%
!!! GTGCTTTTTGAGGTGATGTC+AGG - chr8_3:4751025-4751044 None:intergenic 45.0%
!!! CTTTTTGGCTCGAGGATAGA+AGG - chr8_3:4751666-4751685 None:intergenic 45.0%
ATCCTCGAGCCAAAAAGCTT+TGG + chr8_3:4751669-4751688 Msa1271280:intron 45.0%
!!! TACCAAAGCTTTTTGGCTCG+AGG - chr8_3:4751674-4751693 None:intergenic 45.0%
!! GACATTGTTCTAGGGCAATG+AGG - chr8_3:4747890-4747909 None:intergenic 45.0%
GGGCTAGAGTACAGAAGTAA+CGG + chr8_3:4748772-4748791 Msa1271280:intron 45.0%
GGCTAGAGTACAGAAGTAAC+GGG + chr8_3:4748773-4748792 Msa1271280:intron 45.0%
GCTAGAGTACAGAAGTAACG+GGG + chr8_3:4748774-4748793 Msa1271280:intron 45.0%
!!! AGTAACTGCCGATTTTGAGC+TGG + chr8_3:4752974-4752993 Msa1271280:intron 45.0%
GACATTGTTCGAACGCGATT+AGG - chr8_3:4753101-4753120 None:intergenic 45.0%
CTGCATGACTTCCAAGTTCA+TGG - chr8_3:4753227-4753246 None:intergenic 45.0%
! CGGTGTATTTTCGTGATCCT+TGG + chr8_3:4753376-4753395 Msa1271280:CDS 45.0%
ACAAGGGTCTTGCTGACCAA+TGG + chr8_3:4745593-4745612 Msa1271280:intron 50.0%
!! GGCTCAGCAAAAGCATCACA+AGG + chr8_3:4747259-4747278 Msa1271280:five_prime_UTR 50.0%
ACCACAATGCAGCCATGGTA+CGG - chr8_3:4748145-4748164 None:intergenic 50.0%
TACCATGGCTGCATTGTGGT+TGG + chr8_3:4748145-4748164 Msa1271280:five_prime_UTR 50.0%
TATTGCATGACCGGTTGTGG+AGG - chr8_3:4749874-4749893 None:intergenic 50.0%
AATGGCAGCCTGATCTCGTT+GGG - chr8_3:4750089-4750108 None:intergenic 50.0%
ATGGGAGGAGGAGATGTTAG+GGG - chr8_3:4750169-4750188 None:intergenic 50.0%
CATGGGAGGAGGAGATGTTA+GGG - chr8_3:4750170-4750189 None:intergenic 50.0%
!! TCTTTAGGGTGTGTCGAAGG+GGG - chr8_3:4750225-4750244 None:intergenic 50.0%
!! CTCTTTAGGGTGTGTCGAAG+GGG - chr8_3:4750226-4750245 None:intergenic 50.0%
CTCCTTTGTGTGTGCGGTTT+AGG - chr8_3:4750299-4750318 None:intergenic 50.0%
AAAGGAGTCCCTCCTAACCA+CGG + chr8_3:4750312-4750331 Msa1271280:intron 50.0%
GGATTGATCCGTGGTTAGGA+GGG - chr8_3:4750323-4750342 None:intergenic 50.0%
TGGATTGATCCGTGGTTAGG+AGG - chr8_3:4750324-4750343 None:intergenic 50.0%
!! TGTGATGGTGTTGGTGGAGT+CGG - chr8_3:4750408-4750427 None:intergenic 50.0%
TTGAATGAAAGAGGGCAGGG+TGG - chr8_3:4750462-4750481 None:intergenic 50.0%
TCCTACCCTCCACTCCATAA+TGG + chr8_3:4750484-4750503 Msa1271280:intron 50.0%
CCTACCCTCCACTCCATAAT+GGG + chr8_3:4750485-4750504 Msa1271280:intron 50.0%
GTTAGCAGCCCATTATGGAG+TGG - chr8_3:4750496-4750515 None:intergenic 50.0%
! AGGGTGTTAGCAGCCCATTA+TGG - chr8_3:4750501-4750520 None:intergenic 50.0%
TGGTGATAAATGGGGGTCTG+TGG - chr8_3:4750527-4750546 None:intergenic 50.0%
GGTTGGGGGTTAGGTATATG+AGG - chr8_3:4750583-4750602 None:intergenic 50.0%
AGTATGGAAGGTTGGGGGTT+AGG - chr8_3:4750592-4750611 None:intergenic 50.0%
TTGTACTTGGGCCTTCCTGT+TGG - chr8_3:4750894-4750913 None:intergenic 50.0%
! GGCAACTTTTCGTGCATTGC+GGG - chr8_3:4751056-4751075 None:intergenic 50.0%
! GGGCAACTTTTCGTGCATTG+CGG - chr8_3:4751057-4751076 None:intergenic 50.0%
CCTAGTTGTGAATGAGGTGG+TGG - chr8_3:4751281-4751300 None:intergenic 50.0%
CCACCACCTCATTCACAACT+AGG + chr8_3:4751278-4751297 Msa1271280:intron 50.0%
ACCACAATGCAGCCATGGTA+CGG - chr8_3:4748145-4748164 None:intergenic 50.0%
TACCATGGCTGCATTGTGGT+TGG + chr8_3:4748145-4748164 Msa1271280:five_prime_UTR 50.0%
ACCGTACCATGGCTGCATTG+TGG + chr8_3:4748141-4748160 Msa1271280:five_prime_UTR 55.0%
CACCAACCACAATGCAGCCA+TGG - chr8_3:4748150-4748169 None:intergenic 55.0%
! TGTGGCTGATAGCGAACCCT+AGG - chr8_3:4748681-4748700 None:intergenic 55.0%
ATCTGGAGGGATAATGCCGC+CGG + chr8_3:4749900-4749919 Msa1271280:intron 55.0%
! AAGGCAAATTTGGTGGCCGG+CGG - chr8_3:4749919-4749938 None:intergenic 55.0%
CAATGGCAGCCTGATCTCGT+TGG - chr8_3:4750090-4750109 None:intergenic 55.0%
GCATGGGAGGAGGAGATGTT+AGG - chr8_3:4750171-4750190 None:intergenic 55.0%
GAATTGGCGGAGACGGTTGT+GGG - chr8_3:4750193-4750212 None:intergenic 55.0%
CGCCTAAACCGCACACACAA+AGG + chr8_3:4750294-4750313 Msa1271280:intron 55.0%
GAGGGACTCCTTTGTGTGTG+CGG - chr8_3:4750305-4750324 None:intergenic 55.0%
!! TGATGGTGTTGGTGGAGTCG+GGG - chr8_3:4750406-4750425 None:intergenic 55.0%
!! GTGATGGTGTTGGTGGAGTC+GGG - chr8_3:4750407-4750426 None:intergenic 55.0%
! GGGTGGATCATCATGGTGGA+GGG - chr8_3:4750445-4750464 None:intergenic 55.0%
AGGGTGGATCATCATGGTGG+AGG - chr8_3:4750446-4750465 None:intergenic 55.0%
CCCATTATGGAGTGGAGGGT+AGG - chr8_3:4750488-4750507 None:intergenic 55.0%
GCAGCCCATTATGGAGTGGA+GGG - chr8_3:4750492-4750511 None:intergenic 55.0%
AGCAGCCCATTATGGAGTGG+AGG - chr8_3:4750493-4750512 None:intergenic 55.0%
TCGGATCACCACCAACAGGA+AGG + chr8_3:4750880-4750899 Msa1271280:intron 55.0%
TACTTGGGCCTTCCTGTTGG+TGG - chr8_3:4750891-4750910 None:intergenic 55.0%
ACCGTACCATGGCTGCATTG+TGG + chr8_3:4748141-4748160 Msa1271280:five_prime_UTR 55.0%
CACCAACCACAATGCAGCCA+TGG - chr8_3:4748150-4748169 None:intergenic 55.0%
AGCGGATCATTCTTGCTCCG+AGG + chr8_3:4752699-4752718 Msa1271280:intron 55.0%
GCGGATCATTCTTGCTCCGA+GGG + chr8_3:4752700-4752719 Msa1271280:intron 55.0%
!! TGGGTCATTGGGGCTTGGTG+TGG - chr8_3:4748699-4748718 None:intergenic 60.0%
CGTGGAGACCCTTTCGTGAC+AGG - chr8_3:4749951-4749970 None:intergenic 60.0%
GGAATTGGCGGAGACGGTTG+TGG - chr8_3:4750194-4750213 None:intergenic 60.0%
TAGGGTGTGTCGAAGGGGGT+GGG - chr8_3:4750221-4750240 None:intergenic 60.0%
TTAGGGTGTGTCGAAGGGGG+TGG - chr8_3:4750222-4750241 None:intergenic 60.0%
!! GATGGTGTTGGTGGAGTCGG+GGG - chr8_3:4750405-4750424 None:intergenic 60.0%
GGCAGGGTGGATCATCATGG+TGG - chr8_3:4750449-4750468 None:intergenic 60.0%
GAGGGCAGGGTGGATCATCA+TGG - chr8_3:4750452-4750471 None:intergenic 60.0%
CGTCTCGGATCACCACCAAC+AGG + chr8_3:4750876-4750895 Msa1271280:intron 60.0%
ACGGTTGTGGGCATGGGAGG+AGG - chr8_3:4750181-4750200 None:intergenic 65.0%
GAGACGGTTGTGGGCATGGG+AGG - chr8_3:4750184-4750203 None:intergenic 65.0%
GCGGAGACGGTTGTGGGCAT+GGG - chr8_3:4750187-4750206 None:intergenic 65.0%
GGGCGTGGAATTGGCGGAGA+CGG - chr8_3:4750200-4750219 None:intergenic 65.0%
AAGGGGGTGGGGCGTGGAAT+TGG - chr8_3:4750209-4750228 None:intergenic 65.0%
AGGGTGTGTCGAAGGGGGTG+GGG - chr8_3:4750220-4750239 None:intergenic 65.0%
GGCGGAGACGGTTGTGGGCA+TGG - chr8_3:4750188-4750207 None:intergenic 70.0%
GGGGTGGGGCGTGGAATTGG+CGG - chr8_3:4750206-4750225 None:intergenic 70.0%
GTGTCGAAGGGGGTGGGGCG+TGG - chr8_3:4750215-4750234 None:intergenic 75.0%
Chromosome Type Strat End Strand Name
chr8_3 gene 4745052 4753488 4745052 ID=Msa1271280;Name=Msa1271280
chr8_3 mRNA 4745052 4753488 4745052 ID=Msa1271280-mRNA-1;Parent=Msa1271280;Name=Msa1271280-mRNA-1;_AED=0.04;_eAED=0.04;_QI=1992|0.33|0.25|1|0.33|0.25|4|0|230
chr8_3 exon 4745052 4745211 4745052 ID=Msa1271280-mRNA-1:exon:1621;Parent=Msa1271280-mRNA-1
chr8_3 exon 4746710 4748547 4746710 ID=Msa1271280-mRNA-1:exon:1622;Parent=Msa1271280-mRNA-1
chr8_3 exon 4752089 4752331 4752089 ID=Msa1271280-mRNA-1:exon:1623;Parent=Msa1271280-mRNA-1
chr8_3 exon 4753045 4753488 4753045 ID=Msa1271280-mRNA-1:exon:1624;Parent=Msa1271280-mRNA-1
chr8_3 five_prime_UTR 4745052 4745211 4745052 ID=Msa1271280-mRNA-1:five_prime_utr;Parent=Msa1271280-mRNA-1
chr8_3 five_prime_UTR 4746710 4748541 4746710 ID=Msa1271280-mRNA-1:five_prime_utr;Parent=Msa1271280-mRNA-1
chr8_3 CDS 4748542 4748547 4748542 ID=Msa1271280-mRNA-1:cds;Parent=Msa1271280-mRNA-1
chr8_3 CDS 4752089 4752331 4752089 ID=Msa1271280-mRNA-1:cds;Parent=Msa1271280-mRNA-1
chr8_3 CDS 4753045 4753488 4753045 ID=Msa1271280-mRNA-1:cds;Parent=Msa1271280-mRNA-1
Gene Sequence

>Msa1271280

ATGAAGGAAGTGATTGTGCATGAAATGGGAAGTGATAAAGAAGTGGCAGTTCTTGTTAATGGTCTTTGTAAACATGTTGTGGTGAATTCAACTTGTTACTATGATATTATTAATGAGCTTAATAAGCATTATCAGAATATTTGGAACCGTACCATGGCTGCATTGTGGTTGGTGTATTTTAGAGATGCTTGGAGAGCTAGTTCTACTTTGGTTGGAATTGCTTTTCTTGTTTACACAGCATTCAACTTTTTACCAATCCCGCATTTGAATGTAGACCAAGCAACAGAATGTGTTCTTAGGAACCTAATCGCGTTCGAACAATGTCACTATTCAGACCAACCTTTCATATGCAACTATGTTTCTTTAATTGATTCTTTGATTCATACACATGAAGATGTTGAGTTGTTGGTTGACACAGAAATCATTAGCCATGAACTTGGAAGTCATGCAGAATTGGCAACATTGGTTAATGGTCTTTGCAAATATGTTGTGGTGACATCAAATTGTTATGGAAAGATCATTAAGGAAATGAATGAACATTATAATAACTGGTGGAAACATTATATGGGAATGTTAAGGTCGGTGTATTTTCGTGATCCTTGGAGAGTTAGTTCAACTGTTGTTGGAATTGCTATTTTCTTATTTGCTGCTGTCAATTTTCTTAGAGTTATTGGTGTATTTCGTTTGAAGTAG

Protein sequence

>Msa1271280

MKEVIVHEMGSDKEVAVLVNGLCKHVVVNSTCYYDIINELNKHYQNIWNRTMAALWLVYFRDAWRASSTLVGIAFLVYTAFNFLPIPHLNVDQATECVLRNLIAFEQCHYSDQPFICNYVSLIDSLIHTHEDVELLVDTEIISHELGSHAELATLVNGLCKYVVVTSNCYGKIIKEMNEHYNNWWKHYMGMLRSVYFRDPWRVSSTVVGIAIFLFAAVNFLRVIGVFRLK*