Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931440 | XP_003602039.1 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931440 | sp|Q6YZ54|RFC3_ORYSJ | 80.112 | 357 | 67 | 1 | 2 | 354 | 4 | 360 | 0.0 | 590 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0374270 | Msa0931440 | 0.962496 | 6.024913e-121 | -8.615850e-47 |
| Msa0469740 | Msa0931440 | 0.979637 | 2.083576e-148 | -8.615850e-47 |
| Msa0515560 | Msa0931440 | 0.973572 | 1.177344e-136 | -8.615850e-47 |
| Msa0931440 | Msa1025200 | 0.814549 | 1.456053e-51 | -8.615850e-47 |
| Msa0931440 | Msa1025220 | 0.807459 | 5.002329e-50 | -8.615850e-47 |
| Msa0931440 | Msa1026710 | 0.819105 | 1.382691e-52 | -8.615850e-47 |
| Msa0931440 | Msa1347610 | 0.817910 | 2.580400e-52 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931440 | MtrunA17_Chr3g0124791 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
| Msa0931440 | MtrunA17_Chr4g0057341 | 37.346 | 324 | 192 | 4 | 34 | 353 | 17 | 333 | 3.08e-67 | 215 |
| Msa0931440 | MtrunA17_Chr3g0125031 | 47.368 | 209 | 104 | 2 | 34 | 236 | 11 | 219 | 1.11e-63 | 206 |
| Msa0931440 | MtrunA17_Chr6g0478631 | 24.370 | 357 | 227 | 6 | 33 | 353 | 2 | 351 | 2.37e-32 | 124 |
| Msa0931440 | MtrunA17_Chr6g0460841 | 24.496 | 347 | 219 | 6 | 33 | 343 | 2 | 341 | 2.54e-32 | 124 |
| Msa0931440 | MtrunA17_Chr3g0145801 | 21.493 | 335 | 217 | 12 | 2 | 304 | 394 | 714 | 1.28e-14 | 75.1 |
| Msa0931440 | MtrunA17_Chr5g0404521 | 21.484 | 256 | 167 | 6 | 33 | 264 | 413 | 658 | 7.21e-14 | 72.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0931440 | AT1G77470.1 | 77.027 | 370 | 67 | 4 | 1 | 354 | 1 | 368 | 0.0 | 577 |
| Msa0931440 | AT1G63160.1 | 38.365 | 318 | 185 | 4 | 34 | 347 | 17 | 327 | 2.83e-67 | 215 |
| Msa0931440 | AT1G21690.1 | 38.671 | 331 | 183 | 6 | 34 | 350 | 11 | 335 | 5.20e-66 | 212 |
| Msa0931440 | AT1G21690.3 | 48.402 | 219 | 106 | 3 | 34 | 245 | 11 | 229 | 8.37e-66 | 212 |
| Msa0931440 | AT1G21690.4 | 38.485 | 330 | 178 | 6 | 34 | 350 | 11 | 328 | 2.29e-64 | 207 |
| Msa0931440 | AT1G21690.2 | 38.369 | 331 | 172 | 7 | 34 | 350 | 11 | 323 | 4.75e-64 | 207 |
| Msa0931440 | AT5G27740.1 | 26.705 | 352 | 205 | 8 | 33 | 343 | 2 | 341 | 8.03e-36 | 134 |
| Msa0931440 | AT1G14460.1 | 23.404 | 235 | 156 | 4 | 36 | 249 | 426 | 657 | 1.85e-11 | 66.2 |
| Msa0931440 | AT5G45720.2 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.86e-11 | 65.1 |
| Msa0931440 | AT5G45720.1 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.88e-11 | 65.1 |
| Msa0931440 | AT1G24290.1 | 31.739 | 230 | 129 | 11 | 36 | 249 | 105 | 322 | 4.62e-11 | 64.3 |
| Msa0931440 | AT2G02480.2 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
| Msa0931440 | AT2G02480.1 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 509 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CACCTCTACGTAACGCAAAT+TGG | 0.189548 | 6_2:-80884154 | None:intergenic |
| AGATATTTGCTCAATGTCTT+TGG | 0.248728 | 6_2:-80887956 | None:intergenic |
| CCGAGAGAAATGGGGCTTAA+TGG | 0.253750 | 6_2:+80889772 | Msa0931440:three_prime_UTR |
| TGTTTCGTTTGTTTAACTTT+TGG | 0.262447 | 6_2:+80889721 | Msa0931440:three_prime_UTR |
| CAGTAACACACAAGATTGTT+AGG | 0.277932 | 6_2:+80882461 | None:intergenic |
| TATCTCGGTGCACATAAATT+AGG | 0.293780 | 6_2:-80889601 | None:intergenic |
| TCAGTATCATAATATGATTT+TGG | 0.311016 | 6_2:+80883006 | Msa0931440:CDS |
| ACATTGAGCAAATATCTTAC+TGG | 0.344071 | 6_2:+80887962 | Msa0931440:CDS |
| TGCAGGTACAGATTAAGTTT+TGG | 0.348480 | 6_2:+80889439 | Msa0931440:intron |
| TAAAATTGAACCGAGAGAAA+TGG | 0.361007 | 6_2:+80889762 | Msa0931440:three_prime_UTR |
| CGTCAAACCCTCTGTAAAAC+TGG | 0.370275 | 6_2:+80884094 | Msa0931440:CDS |
| AATCAAGATGCACCCGGTTT+CGG | 0.378472 | 6_2:+80884343 | Msa0931440:CDS |
| AAAATTGAACCGAGAGAAAT+GGG | 0.378938 | 6_2:+80889763 | Msa0931440:three_prime_UTR |
| GATATTTGCTCAATGTCTTT+GGG | 0.389281 | 6_2:-80887955 | None:intergenic |
| GTGCATCTTGATTGCAGTGC+TGG | 0.392350 | 6_2:-80884333 | None:intergenic |
| TTTCCGTTGTACATCGTAGA+AGG | 0.393244 | 6_2:+80889624 | Msa0931440:three_prime_UTR |
| CTGCTGTTGTATGGTCCTCC+TGG | 0.395722 | 6_2:+80882932 | Msa0931440:CDS |
| CAAGAGGGGCAAACCGAAAC+CGG | 0.396956 | 6_2:-80884356 | None:intergenic |
| AGCACTCAGAGTCTATCATT+TGG | 0.402934 | 6_2:+80883091 | Msa0931440:CDS |
| GCCACCGAAGGAAGGGTTAC+CGG | 0.403122 | 6_2:-80882698 | None:intergenic |
| ACCTCTACGTAACGCAAATT+GGG | 0.410660 | 6_2:-80884153 | None:intergenic |
| TGCTCAATGTCTTTGGGCAG+TGG | 0.410840 | 6_2:-80887949 | None:intergenic |
| GCACTCAGAGTCTATCATTT+GGG | 0.412330 | 6_2:+80883092 | Msa0931440:CDS |
| AAAGGCACTGAATATTCTTC+AGG | 0.412974 | 6_2:+80886783 | Msa0931440:CDS |
| AATACTGGTGTAAAATCGTT+TGG | 0.419316 | 6_2:+80889673 | Msa0931440:three_prime_UTR |
| GGTTATGTTGACTGCTCTGA+TGG | 0.433944 | 6_2:+80889694 | Msa0931440:three_prime_UTR |
| AGTGCAGTTGGTGAATGATT+TGG | 0.434023 | 6_2:+80888283 | Msa0931440:CDS |
| GTGGCTTATCTGCTCTTGTT+CGG | 0.434803 | 6_2:+80886740 | Msa0931440:CDS |
| TGGTGCTAACAGCCTAATAC+TGG | 0.441635 | 6_2:+80889658 | Msa0931440:three_prime_UTR |
| ACCAACTGCACTCGAACGGC+TGG | 0.444902 | 6_2:-80888272 | None:intergenic |
| TTGTATGGTCCTCCTGGAAC+GGG | 0.453099 | 6_2:+80882938 | Msa0931440:CDS |
| GCCGCCGGTAACCCTTCCTT+CGG | 0.453827 | 6_2:+80882694 | Msa0931440:CDS |
| ATCAGTGCACCATCATATTC+AGG | 0.461846 | 6_2:-80889550 | None:intergenic |
| TTTCAGTAAGAAAATAGAAA+TGG | 0.470080 | 6_2:-80882539 | None:intergenic |
| TTACCCCATCTGCTGTTGTA+TGG | 0.471783 | 6_2:+80882923 | Msa0931440:CDS |
| TCGGTGGCAAAGCTTCGCTA+TGG | 0.473250 | 6_2:+80882713 | Msa0931440:CDS |
| ATTTCCAGTGCAAAGATAAA+CGG | 0.476730 | 6_2:-80887926 | None:intergenic |
| CCATTAAGCCCCATTTCTCT+CGG | 0.484721 | 6_2:-80889772 | None:intergenic |
| ACATCGTAGAAGGAGGCATC+AGG | 0.497206 | 6_2:+80889634 | Msa0931440:three_prime_UTR |
| CGGTGGCAAAGCTTCGCTAT+GGG | 0.498078 | 6_2:+80882714 | Msa0931440:CDS |
| GAAGCCGTTTATCTTTGCAC+TGG | 0.505763 | 6_2:+80887922 | Msa0931440:CDS |
| GCAACATCGTCGAGGGATTG+AGG | 0.509495 | 6_2:-80882751 | None:intergenic |
| GGCGGAGGAGACTTATCCTA+TGG | 0.511189 | 6_2:+80882636 | Msa0931440:CDS |
| GTTGTATGGTCCTCCTGGAA+CGG | 0.512128 | 6_2:+80882937 | Msa0931440:CDS |
| GCGGTGGCGCGAAAATTATA+CGG | 0.514722 | 6_2:+80882980 | Msa0931440:CDS |
| CTGAATGCTTCAGATGATAG+AGG | 0.516669 | 6_2:+80883031 | Msa0931440:CDS |
| TGAAGCAGATGCCATGACTA+AGG | 0.516889 | 6_2:+80884127 | Msa0931440:CDS |
| GAAGCTTTGCCACCGAAGGA+AGG | 0.543002 | 6_2:-80882706 | None:intergenic |
| TGCATCTTGATTGCAGTGCT+GGG | 0.544244 | 6_2:-80884332 | None:intergenic |
| GCCGGTAACCCTTCCTTCGG+TGG | 0.549196 | 6_2:+80882697 | Msa0931440:CDS |
| AGTAACACACAAGATTGTTA+GGG | 0.550275 | 6_2:+80882462 | None:intergenic |
| GGCAAAACCGTCATTGCCGC+CGG | 0.553759 | 6_2:+80882679 | Msa0931440:CDS |
| GCTCTTGTTCGGCTTAGCAA+TGG | 0.554174 | 6_2:+80886751 | Msa0931440:CDS |
| GCCAGCCGTTCGAGTGCAGT+TGG | 0.554697 | 6_2:+80888271 | Msa0931440:CDS |
| TGCAACGATAAGCTTCAGCT+TGG | 0.555547 | 6_2:+80889463 | Msa0931440:CDS |
| AGGGTTACCGGCGGCAATGA+CGG | 0.559162 | 6_2:-80882686 | None:intergenic |
| GAGGACCATACAACAGCAGA+TGG | 0.563295 | 6_2:-80882928 | None:intergenic |
| GGGTTTAATAACCATGGCGG+AGG | 0.566041 | 6_2:+80882621 | Msa0931440:exon |
| TAGCAATGGTGATATGAGAA+AGG | 0.575803 | 6_2:+80886765 | Msa0931440:CDS |
| TACACGTGCTAGATCTGCAA+TGG | 0.578841 | 6_2:+80889504 | Msa0931440:CDS |
| TCTGTGAAGTCGATGTCCAT+AGG | 0.581778 | 6_2:-80882652 | None:intergenic |
| AAGCTTTGCCACCGAAGGAA+GGG | 0.581985 | 6_2:-80882705 | None:intergenic |
| AAGAGGGGCAAACCGAAACC+GGG | 0.584016 | 6_2:-80884355 | None:intergenic |
| TATGATATGAAAACAAGGAA+AGG | 0.587538 | 6_2:+80888106 | Msa0931440:CDS |
| TATGAAAACAAGGAAAGGAC+TGG | 0.592837 | 6_2:+80888111 | Msa0931440:CDS |
| AACTGCACTCGAACGGCTGG+CGG | 0.597817 | 6_2:-80888269 | None:intergenic |
| GTGAGCTGCAACATCGTCGA+GGG | 0.599799 | 6_2:-80882758 | None:intergenic |
| CACTGCAATCAAGATGCACC+CGG | 0.601545 | 6_2:+80884337 | Msa0931440:CDS |
| TAGCGAAGCTTTGCCACCGA+AGG | 0.602957 | 6_2:-80882710 | None:intergenic |
| GCACCATCATATTCAGGTGA+AGG | 0.603300 | 6_2:-80889544 | None:intergenic |
| ATTCACCAACTGCACTCGAA+CGG | 0.603811 | 6_2:-80888276 | None:intergenic |
| TGACATGGACAGCATCAAGA+GGG | 0.608265 | 6_2:-80884371 | None:intergenic |
| AAATTGGGCATCCTTAGTCA+TGG | 0.619881 | 6_2:-80884138 | None:intergenic |
| GCCCAATTTGCGTTACGTAG+AGG | 0.621180 | 6_2:+80884152 | Msa0931440:CDS |
| AACATGTTATCAATGCTGAA+AGG | 0.623395 | 6_2:+80884406 | Msa0931440:CDS |
| TAGTTAGGGTTTAATAACCA+TGG | 0.624202 | 6_2:+80882615 | Msa0931440:exon |
| AGGATAAGTCTCCTCCGCCA+TGG | 0.624657 | 6_2:-80882632 | None:intergenic |
| AGGACCATACAACAGCAGAT+GGG | 0.625782 | 6_2:-80882927 | None:intergenic |
| TACTTGTGTCGACGATGTCG+CGG | 0.626145 | 6_2:-80882780 | None:intergenic |
| GTTTCAGTCTCTCAGTGACA+TGG | 0.627168 | 6_2:-80884386 | None:intergenic |
| CCGTTGTACATCGTAGAAGG+AGG | 0.629509 | 6_2:+80889627 | Msa0931440:three_prime_UTR |
| TAACCTTCACCTGAATATGA+TGG | 0.629737 | 6_2:+80889541 | Msa0931440:exon |
| GGACCATACAACAGCAGATG+GGG | 0.630103 | 6_2:-80882926 | None:intergenic |
| GATGTACAACGGAAATATCT+CGG | 0.630765 | 6_2:-80889616 | None:intergenic |
| GACATCGACTTCACAGACAA+GGG | 0.631926 | 6_2:+80882658 | Msa0931440:CDS |
| GGACATCGACTTCACAGACA+AGG | 0.636430 | 6_2:+80882657 | Msa0931440:CDS |
| GTGACATGGACAGCATCAAG+AGG | 0.637050 | 6_2:-80884372 | None:intergenic |
| AGAAATATACAAAGAGCACT+AGG | 0.637557 | 6_2:+80884274 | Msa0931440:CDS |
| AGGCTTGATGTTCAAGACAG+TGG | 0.638532 | 6_2:+80886721 | Msa0931440:intron |
| GAATATATGATATGAAAACA+AGG | 0.653141 | 6_2:+80888101 | Msa0931440:CDS |
| AACATCGACGATTCTCGCGG+TGG | 0.654620 | 6_2:+80882964 | Msa0931440:CDS |
| CGTAGAAGGAGGCATCAGGA+TGG | 0.659068 | 6_2:+80889638 | Msa0931440:three_prime_UTR |
| GGTGAGCTGCAACATCGTCG+AGG | 0.664996 | 6_2:-80882759 | None:intergenic |
| CCTCCTTCTACGATGTACAA+CGG | 0.678119 | 6_2:-80889627 | None:intergenic |
| GACATGGACAGCATCAAGAG+GGG | 0.683891 | 6_2:-80884370 | None:intergenic |
| ACCGAAGGAAGGGTTACCGG+CGG | 0.687119 | 6_2:-80882695 | None:intergenic |
| TAAAACATCGACGATTCTCG+CGG | 0.694200 | 6_2:+80882961 | Msa0931440:CDS |
| TTCTTCAGTAATCTGCTGAG+AGG | 0.704249 | 6_2:-80887902 | None:intergenic |
| AAATTGAACCGAGAGAAATG+GGG | 0.746077 | 6_2:+80889764 | Msa0931440:three_prime_UTR |
| TTAGGGTTTAATAACCATGG+CGG | 0.752952 | 6_2:+80882618 | Msa0931440:exon |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TATATATATATATATATATA+TGG | - | chr6_2:80884801-80884820 | None:intergenic | 0.0% |
| !! | ATAAAAATATTTATTCTATC+TGG | + | chr6_2:80886259-80886278 | Msa0931440:intron | 10.0% |
| !! | AAAAAAAAAAAAAAAACTCA+AGG | - | chr6_2:80887658-80887677 | None:intergenic | 10.0% |
| !!! | ATTGTTATTATTATTTTAGT+TGG | + | chr6_2:80887688-80887707 | Msa0931440:intron | 10.0% |
| !! | ATATATTATAACTATTTGTA+AGG | + | chr6_2:80888409-80888428 | Msa0931440:intron | 10.0% |
| !!! | AAAAGTTTTTACAAAGTAAA+CGG | - | chr6_2:80883393-80883412 | None:intergenic | 15.0% |
| !! | AAAAGCCTATTAATTTAATT+AGG | + | chr6_2:80884704-80884723 | Msa0931440:intron | 15.0% |
| !! | TATATTTGTGTTAACTATTA+AGG | + | chr6_2:80884913-80884932 | Msa0931440:intron | 15.0% |
| !! | ACAATTGTAAAATTTATAGA+TGG | - | chr6_2:80885036-80885055 | None:intergenic | 15.0% |
| !!! | ATGTGTAATATTTTATAAGT+TGG | + | chr6_2:80885776-80885795 | Msa0931440:intron | 15.0% |
| !!! | TTTTGTTATTTATTAAAGTG+TGG | + | chr6_2:80885841-80885860 | Msa0931440:intron | 15.0% |
| !!! | TTTGTTATTTATTAAAGTGT+GGG | + | chr6_2:80885842-80885861 | Msa0931440:intron | 15.0% |
| !! | TATAATATTAGTATAACTTG+TGG | - | chr6_2:80886203-80886222 | None:intergenic | 15.0% |
| !! | ATAAGTATGATTTAATGATT+TGG | - | chr6_2:80886326-80886345 | None:intergenic | 15.0% |
| !! | TTTGTAAATAAGAAAACTTA+AGG | - | chr6_2:80886821-80886840 | None:intergenic | 15.0% |
| !! | TATATGAAGATATTAAGAAA+AGG | - | chr6_2:80886859-80886878 | None:intergenic | 15.0% |
| !! | TTCTTAATATCTTCATATAA+AGG | + | chr6_2:80886860-80886879 | Msa0931440:intron | 15.0% |
| !! | TAAATTATATATCCTGAATT+CGG | + | chr6_2:80887541-80887560 | Msa0931440:intron | 15.0% |
| !! | TTAATGCAAGAATTATAAAA+TGG | - | chr6_2:80888071-80888090 | None:intergenic | 15.0% |
| !! | TTTCAGTAAGAAAATAGAAA+TGG | - | chr6_2:80882542-80882561 | None:intergenic | 20.0% |
| !!! | TCAGTATCATAATATGATTT+TGG | + | chr6_2:80883006-80883025 | Msa0931440:CDS | 20.0% |
| !! | AATTTCATTAAAGTTGAACA+AGG | - | chr6_2:80883367-80883386 | None:intergenic | 20.0% |
| !!! | AAAGTTTTTACAAAGTAAAC+GGG | - | chr6_2:80883392-80883411 | None:intergenic | 20.0% |
| !! | AGAAGATAAAATGTTAGTTA+GGG | + | chr6_2:80883499-80883518 | Msa0931440:intron | 20.0% |
| !!! | GTAAAACTAACACAAATTTT+AGG | + | chr6_2:80883628-80883647 | Msa0931440:intron | 20.0% |
| !!! | AAATGTTTTCACAAAGTAAA+CGG | + | chr6_2:80883664-80883683 | Msa0931440:intron | 20.0% |
| !! | ATAAAAGTGAAACAAGAATT+TGG | + | chr6_2:80883993-80884012 | Msa0931440:intron | 20.0% |
| !! | TAAAAGTGAAACAAGAATTT+GGG | + | chr6_2:80883994-80884013 | Msa0931440:intron | 20.0% |
| !! | GTCATACAAAATAATAATTG+TGG | - | chr6_2:80884872-80884891 | None:intergenic | 20.0% |
| !! | ACAATAAATATCAAAGACTT+AGG | - | chr6_2:80885469-80885488 | None:intergenic | 20.0% |
| !!! | TACTTTAGATGCTTTTTATT+TGG | + | chr6_2:80885540-80885559 | Msa0931440:intron | 20.0% |
| !! | TAAATACTATGATGTGTAAT+AGG | + | chr6_2:80885564-80885583 | Msa0931440:intron | 20.0% |
| !! | TTACACATCATAGTAAAAAA+GGG | - | chr6_2:80885764-80885783 | None:intergenic | 20.0% |
| !! | ATTACACATCATAGTAAAAA+AGG | - | chr6_2:80885765-80885784 | None:intergenic | 20.0% |
| !! | TCGATAATAATATGCTATAA+TGG | - | chr6_2:80885963-80885982 | None:intergenic | 20.0% |
| !!! | ATTTTTATAAACTTTTGAGC+AGG | - | chr6_2:80886247-80886266 | None:intergenic | 20.0% |
| !!! | TTCTAGTTATTAAGTTACTA+AGG | + | chr6_2:80886398-80886417 | Msa0931440:intron | 20.0% |
| !!! | AAACATTGTTATTCCATTTT+GGG | + | chr6_2:80886651-80886670 | Msa0931440:intron | 20.0% |
| !! | AAAAGAAACACAAATTTACA+AGG | - | chr6_2:80887588-80887607 | None:intergenic | 20.0% |
| !!! | AAAGCAAAAAAATGTCATTT+AGG | - | chr6_2:80887857-80887876 | None:intergenic | 20.0% |
| !! | ATATCAAATCCATCTATAAA+GGG | - | chr6_2:80888042-80888061 | None:intergenic | 20.0% |
| !! | AATATCAAATCCATCTATAA+AGG | - | chr6_2:80888043-80888062 | None:intergenic | 20.0% |
| !! | GAATATATGATATGAAAACA+AGG | + | chr6_2:80888101-80888120 | Msa0931440:CDS | 20.0% |
| !! | GATCAATAAAATAAATTACC+AGG | - | chr6_2:80888201-80888220 | None:intergenic | 20.0% |
| !! | TAACCTAAAAGCTTATTTAA+AGG | - | chr6_2:80888679-80888698 | None:intergenic | 20.0% |
| !!! | ATGAATTTTACTCATAAACA+TGG | + | chr6_2:80889339-80889358 | Msa0931440:intron | 20.0% |
| !! | TTTTTGTGTGTTTAGTTGAT+AGG | + | chr6_2:80882882-80882901 | Msa0931440:intron | 25.0% |
| ! | ACATGCAAATTTACTACATA+AGG | - | chr6_2:80883212-80883231 | None:intergenic | 25.0% |
| ! | AAATTTGCATGTCAAATTTG+AGG | + | chr6_2:80883220-80883239 | Msa0931440:intron | 25.0% |
| !!! | TTTGACTTGATTTGTTGTTA+TGG | + | chr6_2:80883246-80883265 | Msa0931440:intron | 25.0% |
| !! | ATTTAACTTTGTGTCGAATA+AGG | + | chr6_2:80883305-80883324 | Msa0931440:intron | 25.0% |
| ! | GAGAAGATAAAATGTTAGTT+AGG | + | chr6_2:80883498-80883517 | Msa0931440:intron | 25.0% |
| !! | AATACTGAAAACAGTTCTTT+TGG | + | chr6_2:80883538-80883557 | Msa0931440:intron | 25.0% |
| !! | AATGTTTTCACAAAGTAAAC+GGG | + | chr6_2:80883665-80883684 | Msa0931440:intron | 25.0% |
| ! | TAAACATTAAAGACGATACA+AGG | + | chr6_2:80883841-80883860 | Msa0931440:intron | 25.0% |
| !! | TTTGATAGTTAGAAAAGTTG+AGG | - | chr6_2:80884056-80884075 | None:intergenic | 25.0% |
| !!! | AAGAATATGAAGAGTGTTAT+AGG | - | chr6_2:80884239-80884258 | None:intergenic | 25.0% |
| ! | TAAGTAAGTAATAACAGACA+GGG | - | chr6_2:80884439-80884458 | None:intergenic | 25.0% |
| ! | ATAAGTAAGTAATAACAGAC+AGG | - | chr6_2:80884440-80884459 | None:intergenic | 25.0% |
| ! | CTAATAACTATATTGACCTT+AGG | - | chr6_2:80884954-80884973 | None:intergenic | 25.0% |
| ! | TGAAATTTGTAACACAAACT+AGG | + | chr6_2:80885155-80885174 | Msa0931440:intron | 25.0% |
| !! | TAATATGCACTTTCTTTTAG+TGG | + | chr6_2:80885488-80885507 | Msa0931440:intron | 25.0% |
| !!! | AATATGCTATAATGGATTGA+AGG | - | chr6_2:80885955-80885974 | None:intergenic | 25.0% |
| ! | GTATATTCTCTTCATTATTC+AGG | + | chr6_2:80886154-80886173 | Msa0931440:intron | 25.0% |
| ! | TTATTCAGGAAGTTTAATTG+TGG | + | chr6_2:80886168-80886187 | Msa0931440:intron | 25.0% |
| ! | AATCAGACTAATCAACTAAA+AGG | - | chr6_2:80886350-80886369 | None:intergenic | 25.0% |
| !!! | AGATTTTCTAAAATGTTGTG+AGG | + | chr6_2:80886429-80886448 | Msa0931440:intron | 25.0% |
| !! | TACTGTCTTTTAATGTCAAA+TGG | + | chr6_2:80886512-80886531 | Msa0931440:intron | 25.0% |
| ! | GAAGCATAATATTGGAAATA+TGG | + | chr6_2:80886534-80886553 | Msa0931440:intron | 25.0% |
| ! | AATATTGGAAATATGGAAGA+TGG | + | chr6_2:80886541-80886560 | Msa0931440:intron | 25.0% |
| ! | TTCGACTGTTATAAAAAAAG+TGG | - | chr6_2:80886633-80886652 | None:intergenic | 25.0% |
| !!! | GAAACATTGTTATTCCATTT+TGG | + | chr6_2:80886650-80886669 | Msa0931440:intron | 25.0% |
| !!! | TAACGATTTTGAGTTTTACT+AGG | + | chr6_2:80886701-80886720 | Msa0931440:intron | 25.0% |
| ! | AATACAACTAGTCCTTTAAA+TGG | - | chr6_2:80887055-80887074 | None:intergenic | 25.0% |
| ! | AATACAACTAGTCCTTTAAA+TGG | - | chr6_2:80887055-80887074 | None:intergenic | 25.0% |
| ! | CTTGACTGAAACAAAAATTA+CGG | + | chr6_2:80887352-80887371 | Msa0931440:intron | 25.0% |
| ! | TCTATAAGCATTTATCGTTT+AGG | - | chr6_2:80887624-80887643 | None:intergenic | 25.0% |
| ! | ATACAAAGACACAATAATTC+AGG | - | chr6_2:80887826-80887845 | None:intergenic | 25.0% |
| !! | TACTTTTATCCCTTTATAGA+TGG | + | chr6_2:80888030-80888049 | Msa0931440:intron | 25.0% |
| ! | TTCTTGCATTAATTTCAAAC+AGG | + | chr6_2:80888079-80888098 | Msa0931440:intron | 25.0% |
| ! | TATGATATGAAAACAAGGAA+AGG | + | chr6_2:80888106-80888125 | Msa0931440:CDS | 25.0% |
| ! | AAAATAAATTACCAGGTAGT+TGG | - | chr6_2:80888194-80888213 | None:intergenic | 25.0% |
| ! | AGAATAGCACATAAAAAAGT+AGG | - | chr6_2:80888332-80888351 | None:intergenic | 25.0% |
| ! | TATCTTAAATTTGCAGAAAG+TGG | + | chr6_2:80888840-80888859 | Msa0931440:intron | 25.0% |
| ! | ATCTTAAATTTGCAGAAAGT+GGG | + | chr6_2:80888841-80888860 | Msa0931440:intron | 25.0% |
| ! | TATCTTAAATTTGCAGAAAG+TGG | + | chr6_2:80888840-80888859 | Msa0931440:intron | 25.0% |
| ! | ATCTTAAATTTGCAGAAAGT+GGG | + | chr6_2:80888841-80888860 | Msa0931440:intron | 25.0% |
| ! | TAGTAATTTATGAAAATGCC+CGG | + | chr6_2:80889140-80889159 | Msa0931440:intron | 25.0% |
| ! | ATATGTGTGCTTATCATAAT+TGG | + | chr6_2:80889400-80889419 | Msa0931440:intron | 25.0% |
| ! | GAATAAAATTTCATTGTTGC+AGG | + | chr6_2:80889422-80889441 | Msa0931440:intron | 25.0% |
| !!! | TGTTTCGTTTGTTTAACTTT+TGG | + | chr6_2:80889721-80889740 | Msa0931440:three_prime_UTR | 25.0% |
| !! | AACTAGTAGAGCTTTTTCTA+TGG | - | chr6_2:80882600-80882619 | None:intergenic | 30.0% |
| TAGAAAAAGCTCTACTAGTT+AGG | + | chr6_2:80882600-80882619 | Msa0931440:five_prime_UTR | 30.0% | |
| AGAAAAAGCTCTACTAGTTA+GGG | + | chr6_2:80882601-80882620 | Msa0931440:five_prime_UTR | 30.0% | |
| TAGTTAGGGTTTAATAACCA+TGG | + | chr6_2:80882615-80882634 | Msa0931440:exon | 30.0% | |
| ATAAACCCTAGAAATGAAAG+GGG | - | chr6_2:80882828-80882847 | None:intergenic | 30.0% | |
| GATAAACCCTAGAAATGAAA+GGG | - | chr6_2:80882829-80882848 | None:intergenic | 30.0% | |
| TGATAAACCCTAGAAATGAA+AGG | - | chr6_2:80882830-80882849 | None:intergenic | 30.0% | |
| ! | TCTAGGGTTTATCATTTCTT+CGG | + | chr6_2:80882836-80882855 | Msa0931440:intron | 30.0% |
| ! | TTTTGTGACTGCATAATAGA+TGG | + | chr6_2:80883164-80883183 | Msa0931440:intron | 30.0% |
| ! | TTTGAAATGAACCATTGTGA+TGG | + | chr6_2:80883474-80883493 | Msa0931440:intron | 30.0% |
| TTGAAATGAACCATTGTGAT+GGG | + | chr6_2:80883475-80883494 | Msa0931440:intron | 30.0% | |
| ! | AGTTCTTTTGGCATTTTCAT+TGG | + | chr6_2:80883550-80883569 | Msa0931440:intron | 30.0% |
| ! | ATGAACAAGTGTGCATATTT+TGG | - | chr6_2:80883578-80883597 | None:intergenic | 30.0% |
| !!! | GTTAGTTTTACTTGCTAACA+AGG | - | chr6_2:80883619-80883638 | None:intergenic | 30.0% |
| ! | ATGTTTTCACAAAGTAAACG+GGG | + | chr6_2:80883666-80883685 | Msa0931440:intron | 30.0% |
| TCTATCTTCTTTCTGAATAC+CGG | + | chr6_2:80883761-80883780 | Msa0931440:intron | 30.0% | |
| TTTCTGAATACCGGATAATT+CGG | + | chr6_2:80883770-80883789 | Msa0931440:intron | 30.0% | |
| ATAAAAATGCCCGAATTATC+CGG | - | chr6_2:80883783-80883802 | None:intergenic | 30.0% | |
| !! | AGTGTTGATATCAGCTTAAA+GGG | - | chr6_2:80883821-80883840 | None:intergenic | 30.0% |
| !! | AAGTGTTGATATCAGCTTAA+AGG | - | chr6_2:80883822-80883841 | None:intergenic | 30.0% |
| ATCATGTCTGAAAATTGACA+TGG | - | chr6_2:80883889-80883908 | None:intergenic | 30.0% | |
| ! | ATGTCAATTTTCAGACATGA+TGG | + | chr6_2:80883888-80883907 | Msa0931440:intron | 30.0% |
| !! | AGAAATATACAAAGAGCACT+AGG | + | chr6_2:80884274-80884293 | Msa0931440:CDS | 30.0% |
| AACATGTTATCAATGCTGAA+AGG | + | chr6_2:80884406-80884425 | Msa0931440:CDS | 30.0% | |
| GCCTAACTCGTTTAATAAAT+GGG | + | chr6_2:80884663-80884682 | Msa0931440:intron | 30.0% | |
| ACCCATTTATTAAACGAGTT+AGG | - | chr6_2:80884667-80884686 | None:intergenic | 30.0% | |
| CCTGGCCTAATTAAATTAAT+AGG | - | chr6_2:80884712-80884731 | None:intergenic | 30.0% | |
| CCTATTAATTTAATTAGGCC+AGG | + | chr6_2:80884709-80884728 | Msa0931440:intron | 30.0% | |
| ATTGTGGTATGAGAATTTGA+AGG | - | chr6_2:80884856-80884875 | None:intergenic | 30.0% | |
| !!! | CAAAGGCTTTATTTTAAGTC+TGG | - | chr6_2:80885228-80885247 | None:intergenic | 30.0% |
| CTTAAAATAAAGCCTTTGAC+AGG | + | chr6_2:80885230-80885249 | Msa0931440:intron | 30.0% | |
| AGTGTAATCTATATAGTGTG+CGG | - | chr6_2:80885409-80885428 | None:intergenic | 30.0% | |
| ATACTATGATGTGTAATAGG+AGG | + | chr6_2:80885567-80885586 | Msa0931440:intron | 30.0% | |
| TACTATGATGTGTAATAGGA+GGG | + | chr6_2:80885568-80885587 | Msa0931440:intron | 30.0% | |
| !!! | GTGGGTATTTTTTATTAACG+CGG | + | chr6_2:80885860-80885879 | Msa0931440:intron | 30.0% |
| !!! | TGGGTATTTTTTATTAACGC+GGG | + | chr6_2:80885861-80885880 | Msa0931440:intron | 30.0% |
| !!! | ATTTTTTATTAACGCGGGTA+TGG | + | chr6_2:80885866-80885885 | Msa0931440:intron | 30.0% |
| !!! | TTTTTTATTAACGCGGGTAT+GGG | + | chr6_2:80885867-80885886 | Msa0931440:intron | 30.0% |
| !! | TATAATGGATTGAAGGCAAA+GGG | - | chr6_2:80885948-80885967 | None:intergenic | 30.0% |
| TATTATCGAGTGTCCTTAAA+TGG | + | chr6_2:80885974-80885993 | Msa0931440:intron | 30.0% | |
| AGTAAAACTGCAACCATTTA+AGG | - | chr6_2:80885990-80886009 | None:intergenic | 30.0% | |
| ! | GTCAAATGGAAGCATAATAT+TGG | + | chr6_2:80886526-80886545 | Msa0931440:intron | 30.0% |
| !!! | TTGTTATTCCATTTTGGGAT+TGG | + | chr6_2:80886656-80886675 | Msa0931440:intron | 30.0% |
| ! | TGGAGAATCAAACTATTTTG+TGG | + | chr6_2:80886900-80886919 | Msa0931440:intron | 30.0% |
| ! | TCTTGTCTGAAACAAAAATC+AGG | + | chr6_2:80886991-80887010 | Msa0931440:intron | 30.0% |
| ! | CTTGTCTGAAACAAAAATCA+GGG | + | chr6_2:80886992-80887011 | Msa0931440:intron | 30.0% |
| ! | TGGAGAATCAAACTATTTTG+TGG | + | chr6_2:80886900-80886919 | Msa0931440:intron | 30.0% |
| ! | TCTTGTCTGAAACAAAAATC+AGG | + | chr6_2:80886991-80887010 | Msa0931440:intron | 30.0% |
| ! | CTTGTCTGAAACAAAAATCA+GGG | + | chr6_2:80886992-80887011 | Msa0931440:intron | 30.0% |
| ! | TGGAGAATCAAACTATTTTG+TGG | + | chr6_2:80886900-80886919 | Msa0931440:intron | 30.0% |
| ! | GGAGAATCAAACTATTTTGT+GGG | + | chr6_2:80886901-80886920 | Msa0931440:intron | 30.0% |
| ATACTAAAACTGAGTAGTAC+TGG | - | chr6_2:80887295-80887314 | None:intergenic | 30.0% | |
| CTTGAATAACTTCTGTACTA+TGG | + | chr6_2:80887471-80887490 | Msa0931440:intron | 30.0% | |
| ! | AAGTTTGATTGTTTCTTGCA+TGG | + | chr6_2:80887738-80887757 | Msa0931440:intron | 30.0% |
| TTCAGAACAGCTCTTAAATA+TGG | + | chr6_2:80887778-80887797 | Msa0931440:intron | 30.0% | |
| ! | TATTTTGCAGTCAACTCATA+TGG | + | chr6_2:80887879-80887898 | Msa0931440:intron | 30.0% |
| ATTTCCAGTGCAAAGATAAA+CGG | - | chr6_2:80887929-80887948 | None:intergenic | 30.0% | |
| GATATTTGCTCAATGTCTTT+GGG | - | chr6_2:80887958-80887977 | None:intergenic | 30.0% | |
| AGATATTTGCTCAATGTCTT+TGG | - | chr6_2:80887959-80887978 | None:intergenic | 30.0% | |
| ACATTGAGCAAATATCTTAC+TGG | + | chr6_2:80887962-80887981 | Msa0931440:CDS | 30.0% | |
| TTGATGAAAGACATGTTTGT+CGG | - | chr6_2:80888368-80888387 | None:intergenic | 30.0% | |
| CTTGTTAATTGAGCGAATTA+GGG | - | chr6_2:80888538-80888557 | None:intergenic | 30.0% | |
| TCTTGTTAATTGAGCGAATT+AGG | - | chr6_2:80888539-80888558 | None:intergenic | 30.0% | |
| TTAGGCTATGAAAGGAAAAT+AGG | + | chr6_2:80888627-80888646 | Msa0931440:intron | 30.0% | |
| ! | AGGCCTTTAAATAAGCTTTT+AGG | + | chr6_2:80888673-80888692 | Msa0931440:intron | 30.0% |
| AGGACATAAATACCTATCTT+AGG | + | chr6_2:80888753-80888772 | Msa0931440:intron | 30.0% | |
| ACCTATCTTAGGTAACAAAT+CGG | + | chr6_2:80888764-80888783 | Msa0931440:intron | 30.0% | |
| TGGATATCAGATTCTTAAAC+CGG | + | chr6_2:80888881-80888900 | Msa0931440:intron | 30.0% | |
| TAGATACTAGATATGTAGCA+TGG | + | chr6_2:80889112-80889131 | Msa0931440:intron | 30.0% | |
| TCATAAACATGGATCAATGA+TGG | + | chr6_2:80889350-80889369 | Msa0931440:intron | 30.0% | |
| ! | AACGATTTTACACCAGTATT+AGG | - | chr6_2:80889673-80889692 | None:intergenic | 30.0% |
| AATACTGGTGTAAAATCGTT+TGG | + | chr6_2:80889673-80889692 | Msa0931440:three_prime_UTR | 30.0% | |
| TAAAATTGAACCGAGAGAAA+TGG | + | chr6_2:80889762-80889781 | Msa0931440:three_prime_UTR | 30.0% | |
| AAAATTGAACCGAGAGAAAT+GGG | + | chr6_2:80889763-80889782 | Msa0931440:three_prime_UTR | 30.0% | |
| TTAGGGTTTAATAACCATGG+CGG | + | chr6_2:80882618-80882637 | Msa0931440:exon | 35.0% | |
| TAACTTCCCCTTTCATTTCT+AGG | + | chr6_2:80882819-80882838 | Msa0931440:intron | 35.0% | |
| AACTTCCCCTTTCATTTCTA+GGG | + | chr6_2:80882820-80882839 | Msa0931440:intron | 35.0% | |
| ! | TTCCTAACTTCCTTTTGTGT+GGG | + | chr6_2:80883125-80883144 | Msa0931440:intron | 35.0% |
| ! | ACAAGGAAAGCATGGATAAA+TGG | - | chr6_2:80883350-80883369 | None:intergenic | 35.0% |
| AAAGTTGAACAAGGAAAGCA+TGG | - | chr6_2:80883358-80883377 | None:intergenic | 35.0% | |
| TGAAATGAACCATTGTGATG+GGG | + | chr6_2:80883476-80883495 | Msa0931440:intron | 35.0% | |
| TTCTGAATACCGGATAATTC+GGG | + | chr6_2:80883771-80883790 | Msa0931440:intron | 35.0% | |
| ! | GTGTTGATATCAGCTTAAAG+GGG | - | chr6_2:80883820-80883839 | None:intergenic | 35.0% |
| TGAAAATTGACATGGACATG+AGG | - | chr6_2:80883881-80883900 | None:intergenic | 35.0% | |
| ! | AACAAGACCAGTTTTACAGA+GGG | - | chr6_2:80884104-80884123 | None:intergenic | 35.0% |
| ! | TAACAAGACCAGTTTTACAG+AGG | - | chr6_2:80884105-80884124 | None:intergenic | 35.0% |
| AGTGTTATAGGTCAAGAAAC+TGG | - | chr6_2:80884227-80884246 | None:intergenic | 35.0% | |
| AAACCCAATCCCAAAAATAC+GGG | - | chr6_2:80884559-80884578 | None:intergenic | 35.0% | |
| CAAACCCAATCCCAAAAATA+CGG | - | chr6_2:80884560-80884579 | None:intergenic | 35.0% | |
| !!! | GTATTTTTGGGATTGGGTTT+GGG | + | chr6_2:80884559-80884578 | Msa0931440:intron | 35.0% |
| GGCCTAACTCGTTTAATAAA+TGG | + | chr6_2:80884662-80884681 | Msa0931440:intron | 35.0% | |
| AATTTAATTAGGCCAGGCTT+AGG | + | chr6_2:80884715-80884734 | Msa0931440:intron | 35.0% | |
| !!! | CTTTTTTATAAGCCTAAGCC+TGG | - | chr6_2:80884730-80884749 | None:intergenic | 35.0% |
| TAATATACTCGTATACCGAC+CGG | - | chr6_2:80884771-80884790 | None:intergenic | 35.0% | |
| AGTACGTTGCACAAATTGAA+AGG | + | chr6_2:80885104-80885123 | Msa0931440:intron | 35.0% | |
| ! | CACAAACTAGGCTTTTAAAC+AGG | + | chr6_2:80885167-80885186 | Msa0931440:intron | 35.0% |
| ! | AGGCTTTTAAACAGGCTAAT+AGG | + | chr6_2:80885175-80885194 | Msa0931440:intron | 35.0% |
| !! | GCCAGACCAAACTTTTAAAA+AGG | + | chr6_2:80885197-80885216 | Msa0931440:intron | 35.0% |
| !! | GCCTTTTTAAAAGTTTGGTC+TGG | - | chr6_2:80885201-80885220 | None:intergenic | 35.0% |
| !! | ACCAAACTTTTAAAAAGGCC+AGG | + | chr6_2:80885202-80885221 | Msa0931440:intron | 35.0% |
| TAAAGCCTTTGACAGGTAAA+AGG | + | chr6_2:80885237-80885256 | Msa0931440:intron | 35.0% | |
| AAAAACTAAGGCCTAAGTCT+TGG | - | chr6_2:80885263-80885282 | None:intergenic | 35.0% | |
| !!! | AGGCCTTAGTTTTTTCAACT+AGG | + | chr6_2:80885269-80885288 | Msa0931440:intron | 35.0% |
| AGGCCTAGTTGAAAAAACTA+AGG | - | chr6_2:80885275-80885294 | None:intergenic | 35.0% | |
| TAGCCTATTTAAGCAAAGCT+CGG | + | chr6_2:80885294-80885313 | Msa0931440:intron | 35.0% | |
| GTGTAATCTATATAGTGTGC+GGG | - | chr6_2:80885408-80885427 | None:intergenic | 35.0% | |
| ACTATGATGTGTAATAGGAG+GGG | + | chr6_2:80885569-80885588 | Msa0931440:intron | 35.0% | |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr6_2:80885665-80885684 | None:intergenic | 35.0% |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr6_2:80885664-80885683 | Msa0931440:intron | 35.0% | |
| ! | TTTTTATTAACGCGGGTATG+GGG | + | chr6_2:80885868-80885887 | Msa0931440:intron | 35.0% |
| !! | CTATAATGGATTGAAGGCAA+AGG | - | chr6_2:80885949-80885968 | None:intergenic | 35.0% |
| GATGCAAACTTCTCGTATTA+TGG | - | chr6_2:80886080-80886099 | None:intergenic | 35.0% | |
| ! | AAGTTTAATTGTGGCTTGCA+TGG | + | chr6_2:80886177-80886196 | Msa0931440:intron | 35.0% |
| CTAAAATGTTGTGAGGATTG+AGG | + | chr6_2:80886436-80886455 | Msa0931440:intron | 35.0% | |
| TGTACCACACTATCACTTAA+TGG | - | chr6_2:80886464-80886483 | None:intergenic | 35.0% | |
| AAGACAGTATGTGATTCACA+TGG | - | chr6_2:80886501-80886520 | None:intergenic | 35.0% | |
| CAAGAAGTGAGACATTTCAA+AGG | - | chr6_2:80886587-80886606 | None:intergenic | 35.0% | |
| !! | CTTTGAAATGTCTCACTTCT+TGG | + | chr6_2:80886585-80886604 | Msa0931440:intron | 35.0% |
| TAGCAATGGTGATATGAGAA+AGG | + | chr6_2:80886765-80886784 | Msa0931440:CDS | 35.0% | |
| !! | AAAGGCACTGAATATTCTTC+AGG | + | chr6_2:80886783-80886802 | Msa0931440:CDS | 35.0% |
| ! | AGGAGTAGTTGTATTTGTTG+TGG | + | chr6_2:80886880-80886899 | Msa0931440:intron | 35.0% |
| TCGAGACAACATCCATTTAA+AGG | + | chr6_2:80887040-80887059 | Msa0931440:intron | 35.0% | |
| !! | AGGACTAGTTGTATTTGTTG+TGG | + | chr6_2:80887060-80887079 | Msa0931440:intron | 35.0% |
| TCGAGACAACATCCATTTAA+AGG | + | chr6_2:80887040-80887059 | Msa0931440:intron | 35.0% | |
| !! | AGGACTAGTTGTATTTGTTG+TGG | + | chr6_2:80887060-80887079 | Msa0931440:intron | 35.0% |
| TTACGGTAGCTAGATATACA+TGG | + | chr6_2:80887369-80887388 | Msa0931440:intron | 35.0% | |
| TATATCCTGAATTCGGTACA+TGG | + | chr6_2:80887548-80887567 | Msa0931440:intron | 35.0% | |
| AGAAAAATTGCGCTCAGATT+TGG | - | chr6_2:80887716-80887735 | None:intergenic | 35.0% | |
| TATGAAAACAAGGAAAGGAC+TGG | + | chr6_2:80888111-80888130 | Msa0931440:CDS | 35.0% | |
| !! | TTACACTTTGTTGTTGTCAC+AGG | + | chr6_2:80888225-80888244 | Msa0931440:intron | 35.0% |
| TGATGAAAGACATGTTTGTC+GGG | - | chr6_2:80888367-80888386 | None:intergenic | 35.0% | |
| AGAAAGTGGTATCTTATTGC+TGG | + | chr6_2:80888437-80888456 | Msa0931440:intron | 35.0% | |
| GAAAGTGGTATCTTATTGCT+GGG | + | chr6_2:80888438-80888457 | Msa0931440:intron | 35.0% | |
| ACAAGATAGATTGCACTCTA+AGG | + | chr6_2:80888553-80888572 | Msa0931440:intron | 35.0% | |
| TAGCCTAATAAGAGTCAGTT+GGG | - | chr6_2:80888615-80888634 | None:intergenic | 35.0% | |
| ATAGCCTAATAAGAGTCAGT+TGG | - | chr6_2:80888616-80888635 | None:intergenic | 35.0% | |
| GACTCTTATTAGGCTATGAA+AGG | + | chr6_2:80888619-80888638 | Msa0931440:intron | 35.0% | |
| TAAAGGCCTTACATATGTAC+AGG | - | chr6_2:80888662-80888681 | None:intergenic | 35.0% | |
| AAGTCAATCTGTTACTGCTT+TGG | + | chr6_2:80888698-80888717 | Msa0931440:intron | 35.0% | |
| ATTTATGTCCTTTCCAGTTG+AGG | - | chr6_2:80888744-80888763 | None:intergenic | 35.0% | |
| CCTATCTTAGGTAACAAATC+GGG | + | chr6_2:80888765-80888784 | Msa0931440:intron | 35.0% | |
| TAGTTGTACTGCATGCAATA+TGG | + | chr6_2:80888993-80889012 | Msa0931440:intron | 35.0% | |
| CTAAGAACCAGAAAGAAAAC+AGG | - | chr6_2:80889376-80889395 | None:intergenic | 35.0% | |
| ! | TGCAGGTACAGATTAAGTTT+TGG | + | chr6_2:80889439-80889458 | Msa0931440:intron | 35.0% |
| ! | GCAGGTACAGATTAAGTTTT+GGG | + | chr6_2:80889440-80889459 | Msa0931440:intron | 35.0% |
| TAACCTTCACCTGAATATGA+TGG | + | chr6_2:80889541-80889560 | Msa0931440:exon | 35.0% | |
| ! | TATCTCGGTGCACATAAATT+AGG | - | chr6_2:80889604-80889623 | None:intergenic | 35.0% |
| GATGTACAACGGAAATATCT+CGG | - | chr6_2:80889619-80889638 | None:intergenic | 35.0% | |
| AAATTGAACCGAGAGAAATG+GGG | + | chr6_2:80889764-80889783 | Msa0931440:three_prime_UTR | 35.0% | |
| ATGAAAGGGGAAGTTAGAGA+GGG | - | chr6_2:80882815-80882834 | None:intergenic | 40.0% | |
| AATGAAAGGGGAAGTTAGAG+AGG | - | chr6_2:80882816-80882835 | None:intergenic | 40.0% | |
| TAAAACATCGACGATTCTCG+CGG | + | chr6_2:80882961-80882980 | Msa0931440:CDS | 40.0% | |
| CTGAATGCTTCAGATGATAG+AGG | + | chr6_2:80883031-80883050 | Msa0931440:CDS | 40.0% | |
| AGCACTCAGAGTCTATCATT+TGG | + | chr6_2:80883091-80883110 | Msa0931440:CDS | 40.0% | |
| GCACTCAGAGTCTATCATTT+GGG | + | chr6_2:80883092-80883111 | Msa0931440:CDS | 40.0% | |
| ! | CTTCCTAACTTCCTTTTGTG+TGG | + | chr6_2:80883124-80883143 | Msa0931440:intron | 40.0% |
| CAGTAAAACACCCACACAAA+AGG | - | chr6_2:80883138-80883157 | None:intergenic | 40.0% | |
| TCGAAGCACATTTCACAGTA+TGG | - | chr6_2:80883286-80883305 | None:intergenic | 40.0% | |
| TTATCTTCTCCCCATCACAA+TGG | - | chr6_2:80883488-80883507 | None:intergenic | 40.0% | |
| TATCATTCCATCAGCCAATG+CGG | + | chr6_2:80883728-80883747 | Msa0931440:intron | 40.0% | |
| TAGATATAGAACCTCCGCAT+TGG | - | chr6_2:80883745-80883764 | None:intergenic | 40.0% | |
| AAAGCACATGCAAGCAGAAA+GGG | - | chr6_2:80883955-80883974 | None:intergenic | 40.0% | |
| ! | AAAAGCACATGCAAGCAGAA+AGG | - | chr6_2:80883956-80883975 | None:intergenic | 40.0% |
| ! | TGCTTGCATGTGCTTTTGAT+TGG | + | chr6_2:80883959-80883978 | Msa0931440:intron | 40.0% |
| !! | GCTTGCATGTGCTTTTGATT+GGG | + | chr6_2:80883960-80883979 | Msa0931440:intron | 40.0% |
| AAATTGGGCATCCTTAGTCA+TGG | - | chr6_2:80884141-80884160 | None:intergenic | 40.0% | |
| ACCTCTACGTAACGCAAATT+GGG | - | chr6_2:80884156-80884175 | None:intergenic | 40.0% | |
| TTGAGCTACATTCTCACGAT+GGG | + | chr6_2:80884523-80884542 | Msa0931440:intron | 40.0% | |
| ! | GGGTAAACACCCGTATTTTT+GGG | + | chr6_2:80884547-80884566 | Msa0931440:intron | 40.0% |
| !!! | AACACCCGTATTTTTGGGAT+TGG | + | chr6_2:80884552-80884571 | Msa0931440:intron | 40.0% |
| !!! | ACACCCGTATTTTTGGGATT+GGG | + | chr6_2:80884553-80884572 | Msa0931440:intron | 40.0% |
| !!! | CGTATTTTTGGGATTGGGTT+TGG | + | chr6_2:80884558-80884577 | Msa0931440:intron | 40.0% |
| TTGGGTAATTACCCGCAAAT+AGG | + | chr6_2:80884577-80884596 | Msa0931440:intron | 40.0% | |
| TGGGTAATTACCCGCAAATA+GGG | + | chr6_2:80884578-80884597 | Msa0931440:intron | 40.0% | |
| ! | GCTTGCTACTAATATGCCTA+AGG | + | chr6_2:80884935-80884954 | Msa0931440:intron | 40.0% |
| !! | GCCTGGCCTTTTTAAAAGTT+TGG | - | chr6_2:80885206-80885225 | None:intergenic | 40.0% |
| !!! | GCTTTATTTTAAGTCTGGCC+TGG | - | chr6_2:80885223-80885242 | None:intergenic | 40.0% |
| GAGCTTTGCTTAAATAGGCT+AGG | - | chr6_2:80885295-80885314 | None:intergenic | 40.0% | |
| TATTTAAGCAAAGCTCGGCT+CGG | + | chr6_2:80885299-80885318 | Msa0931440:intron | 40.0% | |
| CCATTCAAATTTGCGAGTAG+GGG | - | chr6_2:80885340-80885359 | None:intergenic | 40.0% | |
| CCCATTCAAATTTGCGAGTA+GGG | - | chr6_2:80885341-80885360 | None:intergenic | 40.0% | |
| CCCTACTCGCAAATTTGAAT+GGG | + | chr6_2:80885338-80885357 | Msa0931440:intron | 40.0% | |
| ACCCATTCAAATTTGCGAGT+AGG | - | chr6_2:80885342-80885361 | None:intergenic | 40.0% | |
| AAATTTGAATGGGTGTGGTG+CGG | + | chr6_2:80885348-80885367 | Msa0931440:intron | 40.0% | |
| GTTGTTGTCATGTGACTGTA+AGG | + | chr6_2:80885614-80885633 | Msa0931440:intron | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr6_2:80885658-80885677 | Msa0931440:intron | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr6_2:80885659-80885678 | Msa0931440:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr6_2:80885690-80885709 | Msa0931440:intron | 40.0% | |
| CATAGTAAAAAAGGGCAACC+CGG | - | chr6_2:80885756-80885775 | None:intergenic | 40.0% | |
| ! | GGAACCATTAAGTGATAGTG+TGG | + | chr6_2:80886457-80886476 | Msa0931440:intron | 40.0% |
| GATGGTAATACATGCTGATC+TGG | + | chr6_2:80886559-80886578 | Msa0931440:intron | 40.0% | |
| GCAAGTTACCAATCCCAAAA+TGG | - | chr6_2:80886667-80886686 | None:intergenic | 40.0% | |
| !! | CAGGGAAGCTTGTTATAACA+TGG | + | chr6_2:80887010-80887029 | Msa0931440:intron | 40.0% |
| !! | CAGGGAAGCTTGTTATAACA+TGG | + | chr6_2:80887010-80887029 | Msa0931440:intron | 40.0% |
| !! | ATTAGCACACTTGTTGACTC+AGG | - | chr6_2:80887401-80887420 | None:intergenic | 40.0% |
| TAAGACCATGTACCGAATTC+AGG | - | chr6_2:80887556-80887575 | None:intergenic | 40.0% | |
| TTCTTCAGTAATCTGCTGAG+AGG | - | chr6_2:80887905-80887924 | None:intergenic | 40.0% | |
| TTACCAGGTAGTTGGATGTT+AGG | - | chr6_2:80888186-80888205 | None:intergenic | 40.0% | |
| !! | AGTGCAGTTGGTGAATGATT+TGG | + | chr6_2:80888283-80888302 | Msa0931440:CDS | 40.0% |
| TTTGTAAGGCTGAGAGAAAG+TGG | + | chr6_2:80888423-80888442 | Msa0931440:intron | 40.0% | |
| GTATCTTATTGCTGGGAACA+GGG | + | chr6_2:80888445-80888464 | Msa0931440:intron | 40.0% | |
| ! | AATTAGGGCCTTTTGGCATT+GGG | - | chr6_2:80888523-80888542 | None:intergenic | 40.0% |
| AGTTGGGTAGTTAGAAAGCA+AGG | - | chr6_2:80888599-80888618 | None:intergenic | 40.0% | |
| ! | CTACCCAACTGACTCTTATT+AGG | + | chr6_2:80888609-80888628 | Msa0931440:intron | 40.0% |
| !! | CCCGATTTGTTACCTAAGAT+AGG | - | chr6_2:80888768-80888787 | None:intergenic | 40.0% |
| ACAGCTACGTATACATGTAC+CGG | - | chr6_2:80888903-80888922 | None:intergenic | 40.0% | |
| AGGTGTACAAATGGTCATTC+AGG | - | chr6_2:80889056-80889075 | None:intergenic | 40.0% | |
| CACACAAGTAGGTGTACAAA+TGG | - | chr6_2:80889065-80889084 | None:intergenic | 40.0% | |
| AGGGGATATGTCTATATTCC+GGG | - | chr6_2:80889161-80889180 | None:intergenic | 40.0% | |
| CAGGGGATATGTCTATATTC+CGG | - | chr6_2:80889162-80889181 | None:intergenic | 40.0% | |
| GTCAGATGAAGCCAAATTTC+AGG | - | chr6_2:80889256-80889275 | None:intergenic | 40.0% | |
| TCTAGCACATACATAACGAC+TGG | - | chr6_2:80889278-80889297 | None:intergenic | 40.0% | |
| ! | ATGATGGCCTGTTTTCTTTC+TGG | + | chr6_2:80889366-80889385 | Msa0931440:intron | 40.0% |
| ATCAGTGCACCATCATATTC+AGG | - | chr6_2:80889553-80889572 | None:intergenic | 40.0% | |
| TTTCCGTTGTACATCGTAGA+AGG | + | chr6_2:80889624-80889643 | Msa0931440:three_prime_UTR | 40.0% | |
| !! | AGGGAAGACTGTGTTTTGAG+CGG | + | chr6_2:80882481-80882500 | Msa0931440:five_prime_UTR | 45.0% |
| TCTGTGAAGTCGATGTCCAT+AGG | - | chr6_2:80882655-80882674 | None:intergenic | 45.0% | |
| !! | GACATCGACTTCACAGACAA+GGG | + | chr6_2:80882658-80882677 | Msa0931440:CDS | 45.0% |
| TTACCCCATCTGCTGTTGTA+TGG | + | chr6_2:80882923-80882942 | Msa0931440:CDS | 45.0% | |
| AGGACCATACAACAGCAGAT+GGG | - | chr6_2:80882930-80882949 | None:intergenic | 45.0% | |
| CACCCACACAAAAGGAAGTT+AGG | - | chr6_2:80883130-80883149 | None:intergenic | 45.0% | |
| CGCTAATTACTGCTGAACTC+TGG | - | chr6_2:80883692-80883711 | None:intergenic | 45.0% | |
| GAGTTCAGCAGTAATTAGCG+TGG | + | chr6_2:80883692-80883711 | Msa0931440:intron | 45.0% | |
| CGTCAAACCCTCTGTAAAAC+TGG | + | chr6_2:80884094-80884113 | Msa0931440:CDS | 45.0% | |
| TGAAGCAGATGCCATGACTA+AGG | + | chr6_2:80884127-80884146 | Msa0931440:CDS | 45.0% | |
| CACCTCTACGTAACGCAAAT+TGG | - | chr6_2:80884157-80884176 | None:intergenic | 45.0% | |
| TGCATCTTGATTGCAGTGCT+GGG | - | chr6_2:80884335-80884354 | None:intergenic | 45.0% | |
| AATCAAGATGCACCCGGTTT+CGG | + | chr6_2:80884343-80884362 | Msa0931440:CDS | 45.0% | |
| TGACATGGACAGCATCAAGA+GGG | - | chr6_2:80884374-80884393 | None:intergenic | 45.0% | |
| GTTTCAGTCTCTCAGTGACA+TGG | - | chr6_2:80884389-80884408 | None:intergenic | 45.0% | |
| GTTGAGCTACATTCTCACGA+TGG | + | chr6_2:80884522-80884541 | Msa0931440:intron | 45.0% | |
| ! | CGGGTAAACACCCGTATTTT+TGG | + | chr6_2:80884546-80884565 | Msa0931440:intron | 45.0% |
| GGGTAATTACCCGCAAATAG+GGG | + | chr6_2:80884579-80884598 | Msa0931440:intron | 45.0% | |
| TAATTACCCGCAAATAGGGG+TGG | + | chr6_2:80884582-80884601 | Msa0931440:intron | 45.0% | |
| AATTACCCGCAAATAGGGGT+GGG | + | chr6_2:80884583-80884602 | Msa0931440:intron | 45.0% | |
| AAAAGCCTATCAAGCCTACC+AGG | + | chr6_2:80884745-80884764 | Msa0931440:intron | 45.0% | |
| !! | CTTGGCCTTTTACCTGTCAA+AGG | - | chr6_2:80885245-80885264 | None:intergenic | 45.0% |
| CAGGTAAAAGGCCAAGACTT+AGG | + | chr6_2:80885249-80885268 | Msa0931440:intron | 45.0% | |
| GAGCCGAGCTTTGCTTAAAT+AGG | - | chr6_2:80885300-80885319 | None:intergenic | 45.0% | |
| TCAAATTTGCGAGTAGGGGT+GGG | - | chr6_2:80885336-80885355 | None:intergenic | 45.0% | |
| TTCAAATTTGCGAGTAGGGG+TGG | - | chr6_2:80885337-80885356 | None:intergenic | 45.0% | |
| CCCCTACTCGCAAATTTGAA+TGG | + | chr6_2:80885337-80885356 | Msa0931440:intron | 45.0% | |
| CTCGCAAATTTGAATGGGTG+TGG | + | chr6_2:80885343-80885362 | Msa0931440:intron | 45.0% | |
| AATTTGAATGGGTGTGGTGC+GGG | + | chr6_2:80885349-80885368 | Msa0931440:intron | 45.0% | |
| TGTAATAGGAGGGGTAACCT+TGG | + | chr6_2:80885578-80885597 | Msa0931440:intron | 45.0% | |
| CAACTTTACCAGTTGAGCCA+AGG | - | chr6_2:80885598-80885617 | None:intergenic | 45.0% | |
| GTCATGTGACTGTAAGGTCA+CGG | + | chr6_2:80885620-80885639 | Msa0931440:intron | 45.0% | |
| TCATGTGACTGTAAGGTCAC+GGG | + | chr6_2:80885621-80885640 | Msa0931440:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr6_2:80885686-80885705 | Msa0931440:intron | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr6_2:80885689-80885708 | Msa0931440:intron | 45.0% | |
| TAGTAAGTACCCTGCCGAAA+GGG | + | chr6_2:80885901-80885920 | Msa0931440:intron | 45.0% | |
| AAGGCAAAGGGATCTGTATG+TGG | - | chr6_2:80885936-80885955 | None:intergenic | 45.0% | |
| TGCATGTGCATTTCAACTGC+TGG | + | chr6_2:80886296-80886315 | Msa0931440:intron | 45.0% | |
| AGGCTTGATGTTCAAGACAG+TGG | + | chr6_2:80886721-80886740 | Msa0931440:intron | 45.0% | |
| GTGGCTTATCTGCTCTTGTT+CGG | + | chr6_2:80886740-80886759 | Msa0931440:CDS | 45.0% | |
| ! | GGCACTGAATATTCTTCAGG+TGG | + | chr6_2:80886786-80886805 | Msa0931440:intron | 45.0% |
| TGTGTGAATGCAAGCGAAAG+GGG | - | chr6_2:80886963-80886982 | None:intergenic | 45.0% | |
| GTGTGTGAATGCAAGCGAAA+GGG | - | chr6_2:80886964-80886983 | None:intergenic | 45.0% | |
| TGTGTGTGAATGCAAGCGAA+AGG | - | chr6_2:80886965-80886984 | None:intergenic | 45.0% | |
| TCGCTTGCATTCACACACAA+TGG | + | chr6_2:80886966-80886985 | Msa0931440:intron | 45.0% | |
| TGTGTGAATGCAAGCGAAAG+GGG | - | chr6_2:80886963-80886982 | None:intergenic | 45.0% | |
| GTGTGTGAATGCAAGCGAAA+GGG | - | chr6_2:80886964-80886983 | None:intergenic | 45.0% | |
| TGTGTGTGAATGCAAGCGAA+AGG | - | chr6_2:80886965-80886984 | None:intergenic | 45.0% | |
| TCGCTTGCATTCACACACAA+TGG | + | chr6_2:80886966-80886985 | Msa0931440:intron | 45.0% | |
| TGTGTCAATGCACACGACAT+GGG | - | chr6_2:80887323-80887342 | None:intergenic | 45.0% | |
| ! | TCGTGTGCATTGACACACTT+CGG | + | chr6_2:80887326-80887345 | Msa0931440:intron | 45.0% |
| GAAGCCGTTTATCTTTGCAC+TGG | + | chr6_2:80887922-80887941 | Msa0931440:CDS | 45.0% | |
| CATCCTAACATCCAACTACC+TGG | + | chr6_2:80888180-80888199 | Msa0931440:intron | 45.0% | |
| ATTCACCAACTGCACTCGAA+CGG | - | chr6_2:80888279-80888298 | None:intergenic | 45.0% | |
| TGTTTGTCGGGTCAAGCATA+AGG | - | chr6_2:80888355-80888374 | None:intergenic | 45.0% | |
| GGTATCTTATTGCTGGGAAC+AGG | + | chr6_2:80888444-80888463 | Msa0931440:intron | 45.0% | |
| ! | TCCACGCTGACTACAAACAA+TGG | + | chr6_2:80888473-80888492 | Msa0931440:intron | 45.0% |
| ! | GAATTAGGGCCTTTTGGCAT+TGG | - | chr6_2:80888524-80888543 | None:intergenic | 45.0% |
| ! | TTGAGCGAATTAGGGCCTTT+TGG | - | chr6_2:80888530-80888549 | None:intergenic | 45.0% |
| ! | CAAGGCATGTTGCTTAAGAG+GGG | - | chr6_2:80888581-80888600 | None:intergenic | 45.0% |
| ! | GCAAGGCATGTTGCTTAAGA+GGG | - | chr6_2:80888582-80888601 | None:intergenic | 45.0% |
| ! | AGCAAGGCATGTTGCTTAAG+AGG | - | chr6_2:80888583-80888602 | None:intergenic | 45.0% |
| GAAAGGAAAATAGGCTCCTC+AGG | + | chr6_2:80888636-80888655 | Msa0931440:intron | 45.0% | |
| CTTACATATGTACAGGCCTG+AGG | - | chr6_2:80888655-80888674 | None:intergenic | 45.0% | |
| CTCAGGCCTGTACATATGTA+AGG | + | chr6_2:80888653-80888672 | Msa0931440:intron | 45.0% | |
| GAACGACAAAGCACACAAGT+AGG | - | chr6_2:80889076-80889095 | None:intergenic | 45.0% | |
| ! | ATTAAGTCTGAAGTGGGGTG+AGG | - | chr6_2:80889193-80889212 | None:intergenic | 45.0% |
| ! | GGGACATTAAGTCTGAAGTG+GGG | - | chr6_2:80889198-80889217 | None:intergenic | 45.0% |
| ! | CGGGACATTAAGTCTGAAGT+GGG | - | chr6_2:80889199-80889218 | None:intergenic | 45.0% |
| ACGGGACATTAAGTCTGAAG+TGG | - | chr6_2:80889200-80889219 | None:intergenic | 45.0% | |
| GAAGCCAAATTTCAGGCACT+CGG | - | chr6_2:80889249-80889268 | None:intergenic | 45.0% | |
| TGCAACGATAAGCTTCAGCT+TGG | + | chr6_2:80889463-80889482 | Msa0931440:CDS | 45.0% | |
| TACACGTGCTAGATCTGCAA+TGG | + | chr6_2:80889504-80889523 | Msa0931440:CDS | 45.0% | |
| GCACCATCATATTCAGGTGA+AGG | - | chr6_2:80889547-80889566 | None:intergenic | 45.0% | |
| CCTCCTTCTACGATGTACAA+CGG | - | chr6_2:80889630-80889649 | None:intergenic | 45.0% | |
| ! | TGGTGCTAACAGCCTAATAC+TGG | + | chr6_2:80889658-80889677 | Msa0931440:three_prime_UTR | 45.0% |
| ! | GGTTATGTTGACTGCTCTGA+TGG | + | chr6_2:80889694-80889713 | Msa0931440:three_prime_UTR | 45.0% |
| !! | ATAATAATAACAATAATAAA+TGG | - | chr6_2:80887682-80887701 | None:intergenic | 5.0% |
| !! | GGGAAGACTGTGTTTTGAGC+GGG | + | chr6_2:80882482-80882501 | Msa0931440:five_prime_UTR | 50.0% |
| GGGTTTAATAACCATGGCGG+AGG | + | chr6_2:80882621-80882640 | Msa0931440:exon | 50.0% | |
| !! | GGACATCGACTTCACAGACA+AGG | + | chr6_2:80882657-80882676 | Msa0931440:CDS | 50.0% |
| AAGCTTTGCCACCGAAGGAA+GGG | - | chr6_2:80882708-80882727 | None:intergenic | 50.0% | |
| ! | TACTTGTGTCGACGATGTCG+CGG | - | chr6_2:80882783-80882802 | None:intergenic | 50.0% |
| GGGGAAGTTAGAGAGGGAAA+GGG | - | chr6_2:80882809-80882828 | None:intergenic | 50.0% | |
| AGGGGAAGTTAGAGAGGGAA+AGG | - | chr6_2:80882810-80882829 | None:intergenic | 50.0% | |
| GGACCATACAACAGCAGATG+GGG | - | chr6_2:80882929-80882948 | None:intergenic | 50.0% | |
| GAGGACCATACAACAGCAGA+TGG | - | chr6_2:80882931-80882950 | None:intergenic | 50.0% | |
| GTTGTATGGTCCTCCTGGAA+CGG | + | chr6_2:80882937-80882956 | Msa0931440:CDS | 50.0% | |
| TTGTATGGTCCTCCTGGAAC+GGG | + | chr6_2:80882938-80882957 | Msa0931440:CDS | 50.0% | |
| ! | GATGTTTTACCCGTTCCAGG+AGG | - | chr6_2:80882950-80882969 | None:intergenic | 50.0% |
| ! | GTCGATGTTTTACCCGTTCC+AGG | - | chr6_2:80882953-80882972 | None:intergenic | 50.0% |
| GCGGTGGCGCGAAAATTATA+CGG | + | chr6_2:80882980-80882999 | Msa0931440:CDS | 50.0% | |
| GCCCAATTTGCGTTACGTAG+AGG | + | chr6_2:80884152-80884171 | Msa0931440:CDS | 50.0% | |
| GTGCATCTTGATTGCAGTGC+TGG | - | chr6_2:80884336-80884355 | None:intergenic | 50.0% | |
| CACTGCAATCAAGATGCACC+CGG | + | chr6_2:80884337-80884356 | Msa0931440:CDS | 50.0% | |
| GACATGGACAGCATCAAGAG+GGG | - | chr6_2:80884373-80884392 | None:intergenic | 50.0% | |
| GTGACATGGACAGCATCAAG+AGG | - | chr6_2:80884375-80884394 | None:intergenic | 50.0% | |
| AGCTACATTCTCACGATGGG+CGG | + | chr6_2:80884526-80884545 | Msa0931440:intron | 50.0% | |
| CTATTCCCACCCCTATTTGC+GGG | - | chr6_2:80884591-80884610 | None:intergenic | 50.0% | |
| CCTATTCCCACCCCTATTTG+CGG | - | chr6_2:80884592-80884611 | None:intergenic | 50.0% | |
| ! | CTTTTAGTAGGCCGAGCCAT+AGG | - | chr6_2:80884634-80884653 | None:intergenic | 50.0% |
| ! | TCTATATAGTGTGCGGGCTG+CGG | - | chr6_2:80885402-80885421 | None:intergenic | 50.0% |
| AAGGTCACGGGTTCAAGTCT+TGG | + | chr6_2:80885633-80885652 | Msa0931440:intron | 50.0% | |
| CTGAAGCTCCCGCATATGTA+GGG | - | chr6_2:80885729-80885748 | None:intergenic | 50.0% | |
| ACTGAAGCTCCCGCATATGT+AGG | - | chr6_2:80885730-80885749 | None:intergenic | 50.0% | |
| TATTAACGCGGGTATGGGGA+TGG | + | chr6_2:80885872-80885891 | Msa0931440:intron | 50.0% | |
| ATTAACGCGGGTATGGGGAT+GGG | + | chr6_2:80885873-80885892 | Msa0931440:intron | 50.0% | |
| GTAGTAAGTACCCTGCCGAA+AGG | + | chr6_2:80885900-80885919 | Msa0931440:intron | 50.0% | |
| AGGGATCTGTATGTGGCACA+GGG | - | chr6_2:80885929-80885948 | None:intergenic | 50.0% | |
| AAGGGATCTGTATGTGGCAC+AGG | - | chr6_2:80885930-80885949 | None:intergenic | 50.0% | |
| GCTCTTGTTCGGCTTAGCAA+TGG | + | chr6_2:80886751-80886770 | Msa0931440:CDS | 50.0% | |
| GTGTGAATGCAAGCGAAAGG+GGG | - | chr6_2:80886962-80886981 | None:intergenic | 50.0% | |
| GTGTGAATGCAAGCGAAAGG+GGG | - | chr6_2:80886962-80886981 | None:intergenic | 50.0% | |
| GTGTCAATGCACACGACATG+GGG | - | chr6_2:80887322-80887341 | None:intergenic | 50.0% | |
| GTGTGTCAATGCACACGACA+TGG | - | chr6_2:80887324-80887343 | None:intergenic | 50.0% | |
| TGCTCAATGTCTTTGGGCAG+TGG | - | chr6_2:80887952-80887971 | None:intergenic | 50.0% | |
| GCCATTGTTTGTAGTCAGCG+TGG | - | chr6_2:80888477-80888496 | None:intergenic | 50.0% | |
| TGAGTAGCCTGAACCTCAAC+TGG | + | chr6_2:80888728-80888747 | Msa0931440:intron | 50.0% | |
| AGCCTGAACCTCAACTGGAA+AGG | + | chr6_2:80888733-80888752 | Msa0931440:intron | 50.0% | |
| GTCCTTTCCAGTTGAGGTTC+AGG | - | chr6_2:80888738-80888757 | None:intergenic | 50.0% | |
| GGGAAGAGCTACTATGCAAC+TGG | + | chr6_2:80888861-80888880 | Msa0931440:intron | 50.0% | |
| TTTGTCGTTCTCACGCGTCT+AGG | + | chr6_2:80889086-80889105 | Msa0931440:intron | 50.0% | |
| TGGGGTGAGGAGAAAGAACA+GGG | - | chr6_2:80889180-80889199 | None:intergenic | 50.0% | |
| AAAGAAGGACGACGCTGCAA+CGG | - | chr6_2:80889219-80889238 | None:intergenic | 50.0% | |
| ! | AGCGTCGTCCTTCTTTTCAG+TGG | + | chr6_2:80889223-80889242 | Msa0931440:intron | 50.0% |
| CCGTTGTACATCGTAGAAGG+AGG | + | chr6_2:80889627-80889646 | Msa0931440:three_prime_UTR | 50.0% | |
| !! | ACATCGTAGAAGGAGGCATC+AGG | + | chr6_2:80889634-80889653 | Msa0931440:three_prime_UTR | 50.0% |
| AGGATAAGTCTCCTCCGCCA+TGG | - | chr6_2:80882635-80882654 | None:intergenic | 55.0% | |
| GGCGGAGGAGACTTATCCTA+TGG | + | chr6_2:80882636-80882655 | Msa0931440:CDS | 55.0% | |
| GAAGCTTTGCCACCGAAGGA+AGG | - | chr6_2:80882709-80882728 | None:intergenic | 55.0% | |
| TAGCGAAGCTTTGCCACCGA+AGG | - | chr6_2:80882713-80882732 | None:intergenic | 55.0% | |
| TCGGTGGCAAAGCTTCGCTA+TGG | + | chr6_2:80882713-80882732 | Msa0931440:CDS | 55.0% | |
| CGGTGGCAAAGCTTCGCTAT+GGG | + | chr6_2:80882714-80882733 | Msa0931440:CDS | 55.0% | |
| GCAACATCGTCGAGGGATTG+AGG | - | chr6_2:80882754-80882773 | None:intergenic | 55.0% | |
| GTGAGCTGCAACATCGTCGA+GGG | - | chr6_2:80882761-80882780 | None:intergenic | 55.0% | |
| CTGCTGTTGTATGGTCCTCC+TGG | + | chr6_2:80882932-80882951 | Msa0931440:CDS | 55.0% | |
| AACATCGACGATTCTCGCGG+TGG | + | chr6_2:80882964-80882983 | Msa0931440:CDS | 55.0% | |
| CATTCCATCAGCCAATGCGG+AGG | + | chr6_2:80883731-80883750 | Msa0931440:intron | 55.0% | |
| !! | AGAACCTCCGCATTGGCTGA+TGG | - | chr6_2:80883738-80883757 | None:intergenic | 55.0% |
| AAGAGGGGCAAACCGAAACC+GGG | - | chr6_2:80884358-80884377 | None:intergenic | 55.0% | |
| CAAGAGGGGCAAACCGAAAC+CGG | - | chr6_2:80884359-80884378 | None:intergenic | 55.0% | |
| GCTACATTCTCACGATGGGC+GGG | + | chr6_2:80884527-80884546 | Msa0931440:intron | 55.0% | |
| CCGCAAATAGGGGTGGGAAT+AGG | + | chr6_2:80884589-80884608 | Msa0931440:intron | 55.0% | |
| AATAGGGGTGGGAATAGGCC+AGG | + | chr6_2:80884594-80884613 | Msa0931440:intron | 55.0% | |
| GGCTCGGCCTACTAAAAGCT+CGG | + | chr6_2:80884636-80884655 | Msa0931440:intron | 55.0% | |
| GGCCTACTAAAAGCTCGGCT+CGG | + | chr6_2:80884641-80884660 | Msa0931440:intron | 55.0% | |
| ! | TATATAGTGTGCGGGCTGCG+GGG | - | chr6_2:80885400-80885419 | None:intergenic | 55.0% |
| ! | CTATATAGTGTGCGGGCTGC+GGG | - | chr6_2:80885401-80885420 | None:intergenic | 55.0% |
| AGGGGTAACCTTGGCTCAAC+TGG | + | chr6_2:80885587-80885606 | Msa0931440:intron | 55.0% | |
| CATATGTAGGGTCCGGGAAG+GGG | - | chr6_2:80885717-80885736 | None:intergenic | 55.0% | |
| GCATATGTAGGGTCCGGGAA+GGG | - | chr6_2:80885718-80885737 | None:intergenic | 55.0% | |
| CTTCCCGGACCCTACATATG+CGG | + | chr6_2:80885717-80885736 | Msa0931440:intron | 55.0% | |
| TTCCCGGACCCTACATATGC+GGG | + | chr6_2:80885718-80885737 | Msa0931440:intron | 55.0% | |
| ! | TGTGGCACAGGGTACCCTTT+CGG | - | chr6_2:80885918-80885937 | None:intergenic | 55.0% |
| GCCTACCTCCCAATGCCAAA+AGG | + | chr6_2:80888512-80888531 | Msa0931440:intron | 55.0% | |
| !! | GCCTTTTGGCATTGGGAGGT+AGG | - | chr6_2:80888516-80888535 | None:intergenic | 55.0% |
| !! | TAGGGCCTTTTGGCATTGGG+AGG | - | chr6_2:80888520-80888539 | None:intergenic | 55.0% |
| GGGGTGAGGAGAAAGAACAG+GGG | - | chr6_2:80889179-80889198 | None:intergenic | 55.0% | |
| GTGGGGTGAGGAGAAAGAAC+AGG | - | chr6_2:80889181-80889200 | None:intergenic | 55.0% | |
| AAGAAGGACGACGCTGCAAC+GGG | - | chr6_2:80889218-80889237 | None:intergenic | 55.0% | |
| GCACTCGGCCACTGAAAAGA+AGG | - | chr6_2:80889234-80889253 | None:intergenic | 55.0% | |
| GTGGCCGAGTGCCTGAAATT+TGG | + | chr6_2:80889242-80889261 | Msa0931440:intron | 55.0% | |
| !! | CGTAGAAGGAGGCATCAGGA+TGG | + | chr6_2:80889638-80889657 | Msa0931440:three_prime_UTR | 55.0% |
| GGCAAAACCGTCATTGCCGC+CGG | + | chr6_2:80882679-80882698 | Msa0931440:CDS | 60.0% | |
| AGGGTTACCGGCGGCAATGA+CGG | - | chr6_2:80882689-80882708 | None:intergenic | 60.0% | |
| ACCGAAGGAAGGGTTACCGG+CGG | - | chr6_2:80882698-80882717 | None:intergenic | 60.0% | |
| GCCACCGAAGGAAGGGTTAC+CGG | - | chr6_2:80882701-80882720 | None:intergenic | 60.0% | |
| GGTGAGCTGCAACATCGTCG+AGG | - | chr6_2:80882762-80882781 | None:intergenic | 60.0% | |
| ! | GGCCGAGCCGAGCTTTTAGT+AGG | - | chr6_2:80884646-80884665 | None:intergenic | 60.0% |
| GCCTATCAAGCCTACCAGGC+CGG | + | chr6_2:80884749-80884768 | Msa0931440:intron | 60.0% | |
| ACCGGCCTGGTAGGCTTGAT+AGG | - | chr6_2:80884753-80884772 | None:intergenic | 60.0% | |
| ATCAAGCCTACCAGGCCGGT+CGG | + | chr6_2:80884753-80884772 | Msa0931440:intron | 60.0% | |
| TACTCGTATACCGACCGGCC+TGG | - | chr6_2:80884766-80884785 | None:intergenic | 60.0% | |
| AGTAGGGGTGGGAATGAGCC+GGG | - | chr6_2:80885325-80885344 | None:intergenic | 60.0% | |
| GAGTAGGGGTGGGAATGAGC+CGG | - | chr6_2:80885326-80885345 | None:intergenic | 60.0% | |
| AATGGGTGTGGTGCGGGTGT+GGG | + | chr6_2:80885355-80885374 | Msa0931440:intron | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr6_2:80885702-80885721 | Msa0931440:intron | 60.0% |
| CGCATATGTAGGGTCCGGGA+AGG | - | chr6_2:80885719-80885738 | None:intergenic | 60.0% | |
| CTCCCGCATATGTAGGGTCC+GGG | - | chr6_2:80885723-80885742 | None:intergenic | 60.0% | |
| GCTCCCGCATATGTAGGGTC+CGG | - | chr6_2:80885724-80885743 | None:intergenic | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr6_2:80885734-80885753 | Msa0931440:intron | 60.0% | |
| ! | CACAGGGTACCCTTTCGGCA+GGG | - | chr6_2:80885913-80885932 | None:intergenic | 60.0% |
| AACTGCACTCGAACGGCTGG+CGG | - | chr6_2:80888272-80888291 | None:intergenic | 60.0% | |
| ACCAACTGCACTCGAACGGC+TGG | - | chr6_2:80888275-80888294 | None:intergenic | 60.0% | |
| GCCGCCGGTAACCCTTCCTT+CGG | + | chr6_2:80882694-80882713 | Msa0931440:CDS | 65.0% | |
| GCCGGTAACCCTTCCTTCGG+TGG | + | chr6_2:80882697-80882716 | Msa0931440:CDS | 65.0% | |
| AATAGGCCAGGCCGCTCGTC+AGG | + | chr6_2:80884606-80884625 | Msa0931440:intron | 65.0% | |
| ATAGGCCAGGCCGCTCGTCA+GGG | + | chr6_2:80884607-80884626 | Msa0931440:intron | 65.0% | |
| AGCCATAGGCCCCTGACGAG+CGG | - | chr6_2:80884620-80884639 | None:intergenic | 65.0% | |
| CTCGTCAGGGGCCTATGGCT+CGG | + | chr6_2:80884620-80884639 | Msa0931440:intron | 65.0% | |
| CGTATACCGACCGGCCTGGT+AGG | - | chr6_2:80884762-80884781 | None:intergenic | 65.0% | |
| !! | AAGCAAAGCTCGGCTCGGCC+CGG | + | chr6_2:80885304-80885323 | Msa0931440:intron | 65.0% |
| GAATGGGTGTGGTGCGGGTG+TGG | + | chr6_2:80885354-80885373 | Msa0931440:intron | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr6_2:80885704-80885723 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr6_2:80885735-80885754 | Msa0931440:intron | 65.0% | |
| ! | GCACAGGGTACCCTTTCGGC+AGG | - | chr6_2:80885914-80885933 | None:intergenic | 65.0% |
| GCCAGCCGTTCGAGTGCAGT+TGG | + | chr6_2:80888271-80888290 | Msa0931440:CDS | 65.0% | |
| TAGGCCAGGCCGCTCGTCAG+GGG | + | chr6_2:80884608-80884627 | Msa0931440:intron | 70.0% | |
| ! | ATAGTGTGCGGGCTGCGGGG+CGG | - | chr6_2:80885397-80885416 | None:intergenic | 70.0% |
| TAGGCCCCTGACGAGCGGCC+TGG | - | chr6_2:80884615-80884634 | None:intergenic | 75.0% | |
| GGCCGCTCGTCAGGGGCCTA+TGG | + | chr6_2:80884615-80884634 | Msa0931440:intron | 75.0% | |
| !! | TGCGGGCTGCGGGGCGGACT+GGG | - | chr6_2:80885391-80885410 | None:intergenic | 80.0% |
| !! | GTGCGGGCTGCGGGGCGGAC+TGG | - | chr6_2:80885392-80885411 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 80882468 | 80889791 | 80882468 | ID=Msa0931440;Name=Msa0931440 |
| chr6_2 | mRNA | 80882468 | 80889791 | 80882468 | ID=Msa0931440-mRNA-1;Parent=Msa0931440;Name=Msa0931440-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|1|1|9|248|355 |
| chr6_2 | exon | 80882468 | 80882799 | 80882468 | ID=Msa0931440-mRNA-1:exon:14142;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80882897 | 80883113 | 80882897 | ID=Msa0931440-mRNA-1:exon:14143;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80884094 | 80884173 | 80884094 | ID=Msa0931440-mRNA-1:exon:14144;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80884268 | 80884427 | 80884268 | ID=Msa0931440-mRNA-1:exon:14145;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80886723 | 80886804 | 80886723 | ID=Msa0931440-mRNA-1:exon:14146;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80887889 | 80888018 | 80887889 | ID=Msa0931440-mRNA-1:exon:14147;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80888101 | 80888164 | 80888101 | ID=Msa0931440-mRNA-1:exon:14148;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80888247 | 80888315 | 80888247 | ID=Msa0931440-mRNA-1:exon:14149;Parent=Msa0931440-mRNA-1 |
| chr6_2 | exon | 80889444 | 80889791 | 80889444 | ID=Msa0931440-mRNA-1:exon:14150;Parent=Msa0931440-mRNA-1 |
| chr6_2 | five_prime_UTR | 80882468 | 80882633 | 80882468 | ID=Msa0931440-mRNA-1:five_prime_utr;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80882634 | 80882799 | 80882634 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80882897 | 80883113 | 80882897 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80884094 | 80884173 | 80884094 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80884268 | 80884427 | 80884268 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80886723 | 80886804 | 80886723 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80887889 | 80888018 | 80887889 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80888101 | 80888164 | 80888101 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80888247 | 80888315 | 80888247 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | CDS | 80889444 | 80889543 | 80889444 | ID=Msa0931440-mRNA-1:cds;Parent=Msa0931440-mRNA-1 |
| chr6_2 | three_prime_UTR | 80889544 | 80889791 | 80889544 | ID=Msa0931440-mRNA-1:three_prime_utr;Parent=Msa0931440-mRNA-1 |
| Gene Sequence |
| Protein sequence |
