Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0469740 | XP_003602039.1 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0469740 | sp|Q6YZ54|RFC3_ORYSJ | 80.112 | 357 | 67 | 1 | 2 | 354 | 4 | 360 | 0.0 | 590 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0469740 | G7J4X7 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0086160 | Msa0469740 | 0.812230 | 4.706692e-51 | -8.615850e-47 |
Msa0374270 | Msa0469740 | 0.963763 | 1.744382e-122 | -8.615850e-47 |
Msa0433060 | Msa0469740 | 0.807126 | 5.887225e-50 | -8.615850e-47 |
Msa0469740 | Msa0515110 | 0.800447 | 1.435402e-48 | -8.615850e-47 |
Msa0469740 | Msa0515560 | 0.989609 | 7.283558e-179 | -8.615850e-47 |
Msa0469740 | Msa0524680 | 0.804930 | 1.705028e-49 | -8.615850e-47 |
Msa0469740 | Msa0580990 | 0.807283 | 5.452091e-50 | -8.615850e-47 |
Msa0469740 | Msa0602900 | 0.800901 | 1.159387e-48 | -8.615850e-47 |
Msa0469740 | Msa0663290 | 0.801499 | 8.748667e-49 | -8.615850e-47 |
Msa0469740 | Msa0931440 | 0.979637 | 2.083576e-148 | -8.615850e-47 |
Msa0469740 | Msa1025200 | 0.838348 | 3.034128e-57 | -8.615850e-47 |
Msa0469740 | Msa1025220 | 0.822635 | 2.132278e-53 | -8.615850e-47 |
Msa0469740 | Msa1026710 | 0.816563 | 5.185845e-52 | -8.615850e-47 |
Msa0469740 | Msa1085850 | 0.810501 | 1.117189e-50 | -8.615850e-47 |
Msa0469740 | Msa1118790 | 0.801892 | 7.264471e-49 | -8.615850e-47 |
Msa0469740 | Msa1136880 | 0.800793 | 1.219958e-48 | -8.615850e-47 |
Msa0469740 | Msa1347610 | 0.812333 | 4.468606e-51 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0469740 | MtrunA17_Chr3g0124791 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Msa0469740 | MtrunA17_Chr4g0057341 | 37.346 | 324 | 192 | 4 | 34 | 353 | 17 | 333 | 3.08e-67 | 215 |
Msa0469740 | MtrunA17_Chr3g0125031 | 47.368 | 209 | 104 | 2 | 34 | 236 | 11 | 219 | 1.11e-63 | 206 |
Msa0469740 | MtrunA17_Chr6g0478631 | 24.370 | 357 | 227 | 6 | 33 | 353 | 2 | 351 | 2.37e-32 | 124 |
Msa0469740 | MtrunA17_Chr6g0460841 | 24.496 | 347 | 219 | 6 | 33 | 343 | 2 | 341 | 2.54e-32 | 124 |
Msa0469740 | MtrunA17_Chr3g0145801 | 21.493 | 335 | 217 | 12 | 2 | 304 | 394 | 714 | 1.28e-14 | 75.1 |
Msa0469740 | MtrunA17_Chr5g0404521 | 21.484 | 256 | 167 | 6 | 33 | 264 | 413 | 658 | 7.21e-14 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0469740 | AT1G77470.1 | 77.027 | 370 | 67 | 4 | 1 | 354 | 1 | 368 | 0.0 | 577 |
Msa0469740 | AT1G63160.1 | 38.365 | 318 | 185 | 4 | 34 | 347 | 17 | 327 | 2.83e-67 | 215 |
Msa0469740 | AT1G21690.1 | 38.671 | 331 | 183 | 6 | 34 | 350 | 11 | 335 | 5.20e-66 | 212 |
Msa0469740 | AT1G21690.3 | 48.402 | 219 | 106 | 3 | 34 | 245 | 11 | 229 | 8.37e-66 | 212 |
Msa0469740 | AT1G21690.4 | 38.485 | 330 | 178 | 6 | 34 | 350 | 11 | 328 | 2.29e-64 | 207 |
Msa0469740 | AT1G21690.2 | 38.369 | 331 | 172 | 7 | 34 | 350 | 11 | 323 | 4.75e-64 | 207 |
Msa0469740 | AT5G27740.1 | 26.705 | 352 | 205 | 8 | 33 | 343 | 2 | 341 | 8.03e-36 | 134 |
Msa0469740 | AT1G14460.1 | 23.404 | 235 | 156 | 4 | 36 | 249 | 426 | 657 | 1.85e-11 | 66.2 |
Msa0469740 | AT5G45720.2 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.86e-11 | 65.1 |
Msa0469740 | AT5G45720.1 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.88e-11 | 65.1 |
Msa0469740 | AT1G24290.1 | 31.739 | 230 | 129 | 11 | 36 | 249 | 105 | 322 | 4.62e-11 | 64.3 |
Msa0469740 | AT2G02480.2 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
Msa0469740 | AT2G02480.1 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 545 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACCTCTACGTAACGCAAAT+TGG | 0.189548 | 3_3:-71716594 | None:intergenic |
CCGAGAGAAATGGGGCTTAA+TGG | 0.221849 | 3_3:+71722445 | Msa0469740:three_prime_UTR |
AGATATTTGCTCAATGTCTT+TGG | 0.248728 | 3_3:-71720412 | None:intergenic |
TGTTTCGTTTGTTTAACTTT+TGG | 0.262447 | 3_3:+71722394 | Msa0469740:three_prime_UTR |
CAGTAACACACAAGATTGTT+AGG | 0.277932 | 3_3:+71714901 | None:intergenic |
TATCTCGGTGCACATAAATT+AGG | 0.293780 | 3_3:-71722274 | None:intergenic |
TCAGTATCATAATATGATTT+TGG | 0.311016 | 3_3:+71715446 | Msa0469740:CDS |
ACATTGAGCAAATATCTTAC+TGG | 0.344071 | 3_3:+71720418 | Msa0469740:CDS |
TGCAGGTACAGATTAAGTTT+TGG | 0.348480 | 3_3:+71722112 | Msa0469740:intron |
TAAAATTGAACCGAGAGAAA+TGG | 0.361007 | 3_3:+71722435 | Msa0469740:three_prime_UTR |
CGTCAAACCCTCTGTAAAAC+TGG | 0.370275 | 3_3:+71716534 | Msa0469740:CDS |
AATCAAGATGCACCCGGTTT+CGG | 0.378472 | 3_3:+71716783 | Msa0469740:CDS |
AAAATTGAACCGAGAGAAAT+GGG | 0.378938 | 3_3:+71722436 | Msa0469740:three_prime_UTR |
GATATTTGCTCAATGTCTTT+GGG | 0.389281 | 3_3:-71720411 | None:intergenic |
GTGCATCTTGATTGCAGTGC+TGG | 0.392350 | 3_3:-71716773 | None:intergenic |
TTTCCGTTGTACATCGTAGA+AGG | 0.393244 | 3_3:+71722297 | Msa0469740:three_prime_UTR |
CTGCTGTTGTATGGTCCTCC+TGG | 0.395722 | 3_3:+71715372 | Msa0469740:CDS |
CAAGAGGGGCAAACCGAAAC+CGG | 0.396956 | 3_3:-71716796 | None:intergenic |
AGCACTCAGAGTCTATCATT+TGG | 0.402934 | 3_3:+71715531 | Msa0469740:CDS |
GCCACCGAAGGAAGGGTTAC+CGG | 0.403122 | 3_3:-71715138 | None:intergenic |
ACCTCTACGTAACGCAAATT+GGG | 0.410660 | 3_3:-71716593 | None:intergenic |
TGCTCAATGTCTTTGGGCAG+TGG | 0.410840 | 3_3:-71720405 | None:intergenic |
GCACTCAGAGTCTATCATTT+GGG | 0.412330 | 3_3:+71715532 | Msa0469740:CDS |
AAAGGCACTGAATATTCTTC+AGG | 0.412974 | 3_3:+71719239 | Msa0469740:CDS |
AATACTGGTGTAAAATCGTT+TGG | 0.419316 | 3_3:+71722346 | Msa0469740:three_prime_UTR |
GGTTATGTTGACTGCTCTGA+TGG | 0.433944 | 3_3:+71722367 | Msa0469740:three_prime_UTR |
AGTGCAGTTGGTGAATGATT+TGG | 0.434023 | 3_3:+71720739 | Msa0469740:CDS |
GTGGCTTATCTGCTCTTGTT+CGG | 0.434803 | 3_3:+71719196 | Msa0469740:CDS |
TGGTGCTAACAGCCTAATAC+TGG | 0.441635 | 3_3:+71722331 | Msa0469740:three_prime_UTR |
ACCAACTGCACTCGAACGGC+TGG | 0.444902 | 3_3:-71720728 | None:intergenic |
TTGTATGGTCCTCCTGGAAC+GGG | 0.453099 | 3_3:+71715378 | Msa0469740:CDS |
GCCGCCGGTAACCCTTCCTT+CGG | 0.453827 | 3_3:+71715134 | Msa0469740:CDS |
ATCAGTGCACCATCATATTC+AGG | 0.461846 | 3_3:-71722223 | None:intergenic |
TTTCAGTAAGAAAATAGAAA+TGG | 0.470080 | 3_3:-71714979 | None:intergenic |
TTACCCCATCTGCTGTTGTA+TGG | 0.471783 | 3_3:+71715363 | Msa0469740:CDS |
TCGGTGGCAAAGCTTCGCTA+TGG | 0.473250 | 3_3:+71715153 | Msa0469740:CDS |
ATTTCCAGTGCAAAGATAAA+CGG | 0.476730 | 3_3:-71720382 | None:intergenic |
CCATTAAGCCCCATTTCTCT+CGG | 0.484721 | 3_3:-71722445 | None:intergenic |
ACATCGTAGAAGGAGGCATC+AGG | 0.497206 | 3_3:+71722307 | Msa0469740:three_prime_UTR |
CGGTGGCAAAGCTTCGCTAT+GGG | 0.498078 | 3_3:+71715154 | Msa0469740:CDS |
GAAGCCGTTTATCTTTGCAC+TGG | 0.505763 | 3_3:+71720378 | Msa0469740:CDS |
GCAACATCGTCGAGGGATTG+AGG | 0.509495 | 3_3:-71715191 | None:intergenic |
GGCGGAGGAGACTTATCCTA+TGG | 0.511189 | 3_3:+71715076 | Msa0469740:CDS |
GTTGTATGGTCCTCCTGGAA+CGG | 0.512128 | 3_3:+71715377 | Msa0469740:CDS |
GCGGTGGCGCGAAAATTATA+CGG | 0.514722 | 3_3:+71715420 | Msa0469740:CDS |
CTGAATGCTTCAGATGATAG+AGG | 0.516669 | 3_3:+71715471 | Msa0469740:CDS |
TGAAGCAGATGCCATGACTA+AGG | 0.516889 | 3_3:+71716567 | Msa0469740:CDS |
GAAGCTTTGCCACCGAAGGA+AGG | 0.543002 | 3_3:-71715146 | None:intergenic |
TGCATCTTGATTGCAGTGCT+GGG | 0.544244 | 3_3:-71716772 | None:intergenic |
GCCGGTAACCCTTCCTTCGG+TGG | 0.549196 | 3_3:+71715137 | Msa0469740:CDS |
AGTAACACACAAGATTGTTA+GGG | 0.550275 | 3_3:+71714902 | None:intergenic |
GGCAAAACCGTCATTGCCGC+CGG | 0.553759 | 3_3:+71715119 | Msa0469740:CDS |
GCTCTTGTTCGGCTTAGCAA+TGG | 0.554174 | 3_3:+71719207 | Msa0469740:CDS |
GCCAGCCGTTCGAGTGCAGT+TGG | 0.554697 | 3_3:+71720727 | Msa0469740:CDS |
TGCAACGATAAGCTTCAGCT+TGG | 0.555547 | 3_3:+71722136 | Msa0469740:CDS |
AGGGTTACCGGCGGCAATGA+CGG | 0.559162 | 3_3:-71715126 | None:intergenic |
GAGGACCATACAACAGCAGA+TGG | 0.563295 | 3_3:-71715368 | None:intergenic |
GGGTTTAATAACCATGGCGG+AGG | 0.566041 | 3_3:+71715061 | Msa0469740:exon |
TAGCAATGGTGATATGAGAA+AGG | 0.575803 | 3_3:+71719221 | Msa0469740:CDS |
TACACGTGCTAGATCTGCAA+TGG | 0.578841 | 3_3:+71722177 | Msa0469740:CDS |
TCTGTGAAGTCGATGTCCAT+AGG | 0.581778 | 3_3:-71715092 | None:intergenic |
AAGCTTTGCCACCGAAGGAA+GGG | 0.581985 | 3_3:-71715145 | None:intergenic |
AAGAGGGGCAAACCGAAACC+GGG | 0.584016 | 3_3:-71716795 | None:intergenic |
TATGATATGAAAACAAGGAA+AGG | 0.587538 | 3_3:+71720562 | Msa0469740:CDS |
TATGAAAACAAGGAAAGGAC+TGG | 0.592837 | 3_3:+71720567 | Msa0469740:CDS |
AACTGCACTCGAACGGCTGG+CGG | 0.597817 | 3_3:-71720725 | None:intergenic |
GTGAGCTGCAACATCGTCGA+GGG | 0.599799 | 3_3:-71715198 | None:intergenic |
CACTGCAATCAAGATGCACC+CGG | 0.601545 | 3_3:+71716777 | Msa0469740:CDS |
TAGCGAAGCTTTGCCACCGA+AGG | 0.602957 | 3_3:-71715150 | None:intergenic |
GCACCATCATATTCAGGTGA+AGG | 0.603300 | 3_3:-71722217 | None:intergenic |
ATTCACCAACTGCACTCGAA+CGG | 0.603811 | 3_3:-71720732 | None:intergenic |
TGACATGGACAGCATCAAGA+GGG | 0.608265 | 3_3:-71716811 | None:intergenic |
AAATTGGGCATCCTTAGTCA+TGG | 0.619881 | 3_3:-71716578 | None:intergenic |
GCCCAATTTGCGTTACGTAG+AGG | 0.621180 | 3_3:+71716592 | Msa0469740:CDS |
AACATGTTATCAATGCTGAA+AGG | 0.623395 | 3_3:+71716846 | Msa0469740:CDS |
TAGTTAGGGTTTAATAACCA+TGG | 0.624202 | 3_3:+71715055 | Msa0469740:exon |
AGGATAAGTCTCCTCCGCCA+TGG | 0.624657 | 3_3:-71715072 | None:intergenic |
AGGACCATACAACAGCAGAT+GGG | 0.625782 | 3_3:-71715367 | None:intergenic |
TACTTGTGTCGACGATGTCG+CGG | 0.626145 | 3_3:-71715220 | None:intergenic |
GTTTCAGTCTCTCAGTGACA+TGG | 0.627168 | 3_3:-71716826 | None:intergenic |
CCGTTGTACATCGTAGAAGG+AGG | 0.629509 | 3_3:+71722300 | Msa0469740:three_prime_UTR |
TAACCTTCACCTGAATATGA+TGG | 0.629737 | 3_3:+71722214 | Msa0469740:exon |
GGACCATACAACAGCAGATG+GGG | 0.630103 | 3_3:-71715366 | None:intergenic |
GATGTACAACGGAAATATCT+CGG | 0.630765 | 3_3:-71722289 | None:intergenic |
GACATCGACTTCACAGACAA+GGG | 0.631926 | 3_3:+71715098 | Msa0469740:CDS |
GGACATCGACTTCACAGACA+AGG | 0.636430 | 3_3:+71715097 | Msa0469740:CDS |
GTGACATGGACAGCATCAAG+AGG | 0.637050 | 3_3:-71716812 | None:intergenic |
AGAAATATACAAAGAGCACT+AGG | 0.637557 | 3_3:+71716714 | Msa0469740:CDS |
AGGCTTGATGTTCAAGACAG+TGG | 0.638532 | 3_3:+71719177 | Msa0469740:intron |
GAATATATGATATGAAAACA+AGG | 0.653141 | 3_3:+71720557 | Msa0469740:CDS |
AACATCGACGATTCTCGCGG+TGG | 0.654620 | 3_3:+71715404 | Msa0469740:CDS |
CGTAGAAGGAGGCATCAGGA+TGG | 0.659068 | 3_3:+71722311 | Msa0469740:three_prime_UTR |
GGTGAGCTGCAACATCGTCG+AGG | 0.664996 | 3_3:-71715199 | None:intergenic |
CCTCCTTCTACGATGTACAA+CGG | 0.678119 | 3_3:-71722300 | None:intergenic |
GACATGGACAGCATCAAGAG+GGG | 0.683891 | 3_3:-71716810 | None:intergenic |
ACCGAAGGAAGGGTTACCGG+CGG | 0.687119 | 3_3:-71715135 | None:intergenic |
TAAAACATCGACGATTCTCG+CGG | 0.694200 | 3_3:+71715401 | Msa0469740:CDS |
TTCTTCAGTAATCTGCTGAG+AGG | 0.704249 | 3_3:-71720358 | None:intergenic |
AAATTGAACCGAGAGAAATG+GGG | 0.746077 | 3_3:+71722437 | Msa0469740:three_prime_UTR |
TTAGGGTTTAATAACCATGG+CGG | 0.752952 | 3_3:+71715058 | Msa0469740:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | - | chr3_3:71717241-71717260 | None:intergenic | 0.0% |
!! | ATAAAAATATTTATTCTATC+TGG | + | chr3_3:71718715-71718734 | Msa0469740:intron | 10.0% |
!! | AAAAAAAAAAAAAAAACTCA+AGG | - | chr3_3:71720114-71720133 | None:intergenic | 10.0% |
!!! | ATTGTTATTATTATTTTAGT+TGG | + | chr3_3:71720144-71720163 | Msa0469740:intron | 10.0% |
!! | ATATATTATAACTATTTGTA+AGG | + | chr3_3:71720865-71720884 | Msa0469740:intron | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+CGG | - | chr3_3:71721400-71721419 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_3:71721400-71721419 | None:intergenic | 100.0% |
! | CGGGGGGGGGGGGGGGGGGG+GGG | - | chr3_3:71721404-71721423 | None:intergenic | 100.0% |
!!! | AAAAGTTTTTACAAAGTAAA+CGG | - | chr3_3:71715833-71715852 | None:intergenic | 15.0% |
!! | AAAAGCCTATTAATTTAATT+AGG | + | chr3_3:71717144-71717163 | Msa0469740:intron | 15.0% |
!! | TATATTTGTGTTAACTATTA+AGG | + | chr3_3:71717369-71717388 | Msa0469740:intron | 15.0% |
!! | ACAATTGTAAAATTTATAGA+TGG | - | chr3_3:71717492-71717511 | None:intergenic | 15.0% |
!!! | ATGTGTAATATTTTATAAGT+TGG | + | chr3_3:71718232-71718251 | Msa0469740:intron | 15.0% |
!!! | TTTTGTTATTTATTAAAGTG+TGG | + | chr3_3:71718297-71718316 | Msa0469740:intron | 15.0% |
!!! | TTTGTTATTTATTAAAGTGT+GGG | + | chr3_3:71718298-71718317 | Msa0469740:intron | 15.0% |
!! | TATAATATTAGTATAACTTG+TGG | - | chr3_3:71718659-71718678 | None:intergenic | 15.0% |
!! | ATAAGTATGATTTAATGATT+TGG | - | chr3_3:71718782-71718801 | None:intergenic | 15.0% |
!! | TTTGTAAATAAGAAAACTTA+AGG | - | chr3_3:71719277-71719296 | None:intergenic | 15.0% |
!! | TATATGAAGATATTAAGAAA+AGG | - | chr3_3:71719315-71719334 | None:intergenic | 15.0% |
!! | TTCTTAATATCTTCATATAA+AGG | + | chr3_3:71719316-71719335 | Msa0469740:intron | 15.0% |
!! | TAAATTATATATCCTGAATT+CGG | + | chr3_3:71719997-71720016 | Msa0469740:intron | 15.0% |
!! | TTAATGCAAGAATTATAAAA+TGG | - | chr3_3:71720527-71720546 | None:intergenic | 15.0% |
!! | TTTCAGTAAGAAAATAGAAA+TGG | - | chr3_3:71714982-71715001 | None:intergenic | 20.0% |
!!! | TCAGTATCATAATATGATTT+TGG | + | chr3_3:71715446-71715465 | Msa0469740:CDS | 20.0% |
!! | AATTTCATTAAAGTTGAACA+AGG | - | chr3_3:71715807-71715826 | None:intergenic | 20.0% |
!!! | AAAGTTTTTACAAAGTAAAC+GGG | - | chr3_3:71715832-71715851 | None:intergenic | 20.0% |
!! | AGAAGATAAAATGTTAGTTA+GGG | + | chr3_3:71715939-71715958 | Msa0469740:intron | 20.0% |
!!! | GTAAAACTAACACAAATTTT+AGG | + | chr3_3:71716068-71716087 | Msa0469740:intron | 20.0% |
!!! | AAATGTTTTCACAAAGTAAA+CGG | + | chr3_3:71716104-71716123 | Msa0469740:intron | 20.0% |
!! | ATAAAAGTGAAACAAGAATT+TGG | + | chr3_3:71716433-71716452 | Msa0469740:intron | 20.0% |
!! | TAAAAGTGAAACAAGAATTT+GGG | + | chr3_3:71716434-71716453 | Msa0469740:intron | 20.0% |
!! | GTCATACAAAATAATAATTG+TGG | - | chr3_3:71717328-71717347 | None:intergenic | 20.0% |
!! | ACAATAAATATCAAAGACTT+AGG | - | chr3_3:71717925-71717944 | None:intergenic | 20.0% |
!!! | TACTTTAGATGCTTTTTATT+TGG | + | chr3_3:71717996-71718015 | Msa0469740:intron | 20.0% |
!! | TAAATACTATGATGTGTAAT+AGG | + | chr3_3:71718020-71718039 | Msa0469740:intron | 20.0% |
!! | TTACACATCATAGTAAAAAA+GGG | - | chr3_3:71718220-71718239 | None:intergenic | 20.0% |
!! | ATTACACATCATAGTAAAAA+AGG | - | chr3_3:71718221-71718240 | None:intergenic | 20.0% |
!! | TCGATAATAATATGCTATAA+TGG | - | chr3_3:71718419-71718438 | None:intergenic | 20.0% |
!!! | ATTTTTATAAACTTTTGAGC+AGG | - | chr3_3:71718703-71718722 | None:intergenic | 20.0% |
!!! | TTCTAGTTATTAAGTTACTA+AGG | + | chr3_3:71718854-71718873 | Msa0469740:intron | 20.0% |
!!! | AAACATTGTTATTCCATTTT+GGG | + | chr3_3:71719107-71719126 | Msa0469740:intron | 20.0% |
!! | AAAAGAAACACAAATTTACA+AGG | - | chr3_3:71720044-71720063 | None:intergenic | 20.0% |
!!! | AAAGCAAAAAAATGTCATTT+AGG | - | chr3_3:71720313-71720332 | None:intergenic | 20.0% |
!! | ATATCAAATCCATCTATAAA+GGG | - | chr3_3:71720498-71720517 | None:intergenic | 20.0% |
!! | AATATCAAATCCATCTATAA+AGG | - | chr3_3:71720499-71720518 | None:intergenic | 20.0% |
!! | GAATATATGATATGAAAACA+AGG | + | chr3_3:71720557-71720576 | Msa0469740:CDS | 20.0% |
!! | GATCAATAAAATAAATTACC+AGG | - | chr3_3:71720657-71720676 | None:intergenic | 20.0% |
!! | TAACCTAAAAGCTTATTTAA+AGG | - | chr3_3:71721135-71721154 | None:intergenic | 20.0% |
!!! | ATGAATTTTACTCATAAACA+TGG | + | chr3_3:71722012-71722031 | Msa0469740:intron | 20.0% |
!! | TTTTTGTGTGTTTAGTTGAT+AGG | + | chr3_3:71715322-71715341 | Msa0469740:intron | 25.0% |
! | ACATGCAAATTTACTACATA+AGG | - | chr3_3:71715652-71715671 | None:intergenic | 25.0% |
! | AAATTTGCATGTCAAATTTG+AGG | + | chr3_3:71715660-71715679 | Msa0469740:intron | 25.0% |
!!! | TTTGACTTGATTTGTTGTTA+TGG | + | chr3_3:71715686-71715705 | Msa0469740:intron | 25.0% |
!! | ATTTAACTTTGTGTCGAATA+AGG | + | chr3_3:71715745-71715764 | Msa0469740:intron | 25.0% |
! | GAGAAGATAAAATGTTAGTT+AGG | + | chr3_3:71715938-71715957 | Msa0469740:intron | 25.0% |
!! | AATACTGAAAACAGTTCTTT+TGG | + | chr3_3:71715978-71715997 | Msa0469740:intron | 25.0% |
!! | AATGTTTTCACAAAGTAAAC+GGG | + | chr3_3:71716105-71716124 | Msa0469740:intron | 25.0% |
! | TAAACATTAAAGACGATACA+AGG | + | chr3_3:71716281-71716300 | Msa0469740:intron | 25.0% |
!! | TTTGATAGTTAGAAAAGTTG+AGG | - | chr3_3:71716496-71716515 | None:intergenic | 25.0% |
!!! | AAGAATATGAAGAGTGTTAT+AGG | - | chr3_3:71716679-71716698 | None:intergenic | 25.0% |
! | TAAGTAAGTAATAACAGACA+GGG | - | chr3_3:71716879-71716898 | None:intergenic | 25.0% |
! | ATAAGTAAGTAATAACAGAC+AGG | - | chr3_3:71716880-71716899 | None:intergenic | 25.0% |
! | CTAATAACTATATTGACCTT+AGG | - | chr3_3:71717410-71717429 | None:intergenic | 25.0% |
! | TGAAATTTGTAACACAAACT+AGG | + | chr3_3:71717611-71717630 | Msa0469740:intron | 25.0% |
!! | TAATATGCACTTTCTTTTAG+TGG | + | chr3_3:71717944-71717963 | Msa0469740:intron | 25.0% |
!!! | AATATGCTATAATGGATTGA+AGG | - | chr3_3:71718411-71718430 | None:intergenic | 25.0% |
! | GTATATTCTCTTCATTATTC+AGG | + | chr3_3:71718610-71718629 | Msa0469740:intron | 25.0% |
! | TTATTCAGGAAGTTTAATTG+TGG | + | chr3_3:71718624-71718643 | Msa0469740:intron | 25.0% |
! | AATCAGACTAATCAACTAAA+AGG | - | chr3_3:71718806-71718825 | None:intergenic | 25.0% |
!!! | AGATTTTCTAAAATGTTGTG+AGG | + | chr3_3:71718885-71718904 | Msa0469740:intron | 25.0% |
!! | TACTGTCTTTTAATGTCAAA+TGG | + | chr3_3:71718968-71718987 | Msa0469740:intron | 25.0% |
! | GAAGCATAATATTGGAAATA+TGG | + | chr3_3:71718990-71719009 | Msa0469740:intron | 25.0% |
! | AATATTGGAAATATGGAAGA+TGG | + | chr3_3:71718997-71719016 | Msa0469740:intron | 25.0% |
! | TTCGACTGTTATAAAAAAAG+TGG | - | chr3_3:71719089-71719108 | None:intergenic | 25.0% |
!!! | GAAACATTGTTATTCCATTT+TGG | + | chr3_3:71719106-71719125 | Msa0469740:intron | 25.0% |
!!! | TAACGATTTTGAGTTTTACT+AGG | + | chr3_3:71719157-71719176 | Msa0469740:intron | 25.0% |
! | AATACAACTAGTCCTTTAAA+TGG | - | chr3_3:71719511-71719530 | None:intergenic | 25.0% |
! | AATACAACTAGTCCTTTAAA+TGG | - | chr3_3:71719511-71719530 | None:intergenic | 25.0% |
! | CTTGACTGAAACAAAAATTA+CGG | + | chr3_3:71719808-71719827 | Msa0469740:intron | 25.0% |
!! | CTTGAATAACTTTTGTACTA+TGG | + | chr3_3:71719927-71719946 | Msa0469740:intron | 25.0% |
! | TCTATAAGCATTTATCGTTT+AGG | - | chr3_3:71720080-71720099 | None:intergenic | 25.0% |
! | ATACAAAGACACAATAATTC+AGG | - | chr3_3:71720282-71720301 | None:intergenic | 25.0% |
!! | TACTTTTATCCCTTTATAGA+TGG | + | chr3_3:71720486-71720505 | Msa0469740:intron | 25.0% |
! | TTCTTGCATTAATTTCAAAC+AGG | + | chr3_3:71720535-71720554 | Msa0469740:intron | 25.0% |
! | TATGATATGAAAACAAGGAA+AGG | + | chr3_3:71720562-71720581 | Msa0469740:CDS | 25.0% |
! | AAAATAAATTACCAGGTAGT+TGG | - | chr3_3:71720650-71720669 | None:intergenic | 25.0% |
! | AGAATAGCACATAAAAAAGT+AGG | - | chr3_3:71720788-71720807 | None:intergenic | 25.0% |
! | AAAAAAACTTGAGCTTATGT+GGG | + | chr3_3:71721261-71721280 | Msa0469740:intron | 25.0% |
! | GAAAGAACAGAACAATAATT+TGG | + | chr3_3:71721334-71721353 | Msa0469740:intron | 25.0% |
! | TATCTTAAATTTGCAGAAAG+TGG | + | chr3_3:71721513-71721532 | Msa0469740:intron | 25.0% |
! | ATCTTAAATTTGCAGAAAGT+GGG | + | chr3_3:71721514-71721533 | Msa0469740:intron | 25.0% |
! | TATCTTAAATTTGCAGAAAG+TGG | + | chr3_3:71721513-71721532 | Msa0469740:intron | 25.0% |
! | ATCTTAAATTTGCAGAAAGT+GGG | + | chr3_3:71721514-71721533 | Msa0469740:intron | 25.0% |
! | TAGTAATTTATGAAAATGCC+CGG | + | chr3_3:71721813-71721832 | Msa0469740:intron | 25.0% |
! | ATATGTGTGCTTATCATAAT+TGG | + | chr3_3:71722073-71722092 | Msa0469740:intron | 25.0% |
! | GAATAAAATTTCATTGTTGC+AGG | + | chr3_3:71722095-71722114 | Msa0469740:intron | 25.0% |
!!! | TGTTTCGTTTGTTTAACTTT+TGG | + | chr3_3:71722394-71722413 | Msa0469740:three_prime_UTR | 25.0% |
!! | AACTAGTAGAGCTTTTTCTA+TGG | - | chr3_3:71715040-71715059 | None:intergenic | 30.0% |
TAGAAAAAGCTCTACTAGTT+AGG | + | chr3_3:71715040-71715059 | Msa0469740:five_prime_UTR | 30.0% | |
AGAAAAAGCTCTACTAGTTA+GGG | + | chr3_3:71715041-71715060 | Msa0469740:five_prime_UTR | 30.0% | |
TAGTTAGGGTTTAATAACCA+TGG | + | chr3_3:71715055-71715074 | Msa0469740:exon | 30.0% | |
ATAAACCCTAGAAATGAAAG+GGG | - | chr3_3:71715268-71715287 | None:intergenic | 30.0% | |
GATAAACCCTAGAAATGAAA+GGG | - | chr3_3:71715269-71715288 | None:intergenic | 30.0% | |
TGATAAACCCTAGAAATGAA+AGG | - | chr3_3:71715270-71715289 | None:intergenic | 30.0% | |
! | TCTAGGGTTTATCATTTCTT+CGG | + | chr3_3:71715276-71715295 | Msa0469740:intron | 30.0% |
! | TTTTGTGACTGCATAATAGA+TGG | + | chr3_3:71715604-71715623 | Msa0469740:intron | 30.0% |
! | TTTGAAATGAACCATTGTGA+TGG | + | chr3_3:71715914-71715933 | Msa0469740:intron | 30.0% |
TTGAAATGAACCATTGTGAT+GGG | + | chr3_3:71715915-71715934 | Msa0469740:intron | 30.0% | |
! | AGTTCTTTTGGCATTTTCAT+TGG | + | chr3_3:71715990-71716009 | Msa0469740:intron | 30.0% |
! | ATGAACAAGTGTGCATATTT+TGG | - | chr3_3:71716018-71716037 | None:intergenic | 30.0% |
!!! | GTTAGTTTTACTTGCTAACA+AGG | - | chr3_3:71716059-71716078 | None:intergenic | 30.0% |
! | ATGTTTTCACAAAGTAAACG+GGG | + | chr3_3:71716106-71716125 | Msa0469740:intron | 30.0% |
TCTATCTTCTTTCTGAATAC+CGG | + | chr3_3:71716201-71716220 | Msa0469740:intron | 30.0% | |
TTTCTGAATACCGGATAATT+CGG | + | chr3_3:71716210-71716229 | Msa0469740:intron | 30.0% | |
ATAAAAATGCCCGAATTATC+CGG | - | chr3_3:71716223-71716242 | None:intergenic | 30.0% | |
!! | AGTGTTGATATCAGCTTAAA+GGG | - | chr3_3:71716261-71716280 | None:intergenic | 30.0% |
!! | AAGTGTTGATATCAGCTTAA+AGG | - | chr3_3:71716262-71716281 | None:intergenic | 30.0% |
ATCATGTCTGAAAATTGACA+TGG | - | chr3_3:71716329-71716348 | None:intergenic | 30.0% | |
! | ATGTCAATTTTCAGACATGA+TGG | + | chr3_3:71716328-71716347 | Msa0469740:intron | 30.0% |
!! | AGAAATATACAAAGAGCACT+AGG | + | chr3_3:71716714-71716733 | Msa0469740:CDS | 30.0% |
AACATGTTATCAATGCTGAA+AGG | + | chr3_3:71716846-71716865 | Msa0469740:CDS | 30.0% | |
GCCTAACTCGTTTAATAAAT+GGG | + | chr3_3:71717103-71717122 | Msa0469740:intron | 30.0% | |
ACCCATTTATTAAACGAGTT+AGG | - | chr3_3:71717107-71717126 | None:intergenic | 30.0% | |
CCTGGCCTAATTAAATTAAT+AGG | - | chr3_3:71717152-71717171 | None:intergenic | 30.0% | |
CCTATTAATTTAATTAGGCC+AGG | + | chr3_3:71717149-71717168 | Msa0469740:intron | 30.0% | |
ATTGTGGTATGAGAATTTGA+AGG | - | chr3_3:71717312-71717331 | None:intergenic | 30.0% | |
!!! | CAAAGGCTTTATTTTAAGTC+TGG | - | chr3_3:71717684-71717703 | None:intergenic | 30.0% |
CTTAAAATAAAGCCTTTGAC+AGG | + | chr3_3:71717686-71717705 | Msa0469740:intron | 30.0% | |
ATACTATGATGTGTAATAGG+AGG | + | chr3_3:71718023-71718042 | Msa0469740:intron | 30.0% | |
TACTATGATGTGTAATAGGA+GGG | + | chr3_3:71718024-71718043 | Msa0469740:intron | 30.0% | |
!!! | GTGGGTATTTTTTATTAACG+CGG | + | chr3_3:71718316-71718335 | Msa0469740:intron | 30.0% |
!!! | TGGGTATTTTTTATTAACGC+GGG | + | chr3_3:71718317-71718336 | Msa0469740:intron | 30.0% |
!!! | ATTTTTTATTAACGCGGGTA+TGG | + | chr3_3:71718322-71718341 | Msa0469740:intron | 30.0% |
!!! | TTTTTTATTAACGCGGGTAT+GGG | + | chr3_3:71718323-71718342 | Msa0469740:intron | 30.0% |
!! | TATAATGGATTGAAGGCAAA+GGG | - | chr3_3:71718404-71718423 | None:intergenic | 30.0% |
TATTATCGAGTGTCCTTAAA+TGG | + | chr3_3:71718430-71718449 | Msa0469740:intron | 30.0% | |
AGTAAAACTGCAACCATTTA+AGG | - | chr3_3:71718446-71718465 | None:intergenic | 30.0% | |
! | GTCAAATGGAAGCATAATAT+TGG | + | chr3_3:71718982-71719001 | Msa0469740:intron | 30.0% |
!!! | TTGTTATTCCATTTTGGGAT+TGG | + | chr3_3:71719112-71719131 | Msa0469740:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | + | chr3_3:71719356-71719375 | Msa0469740:intron | 30.0% |
! | TCTTGTCTGAAACAAAAATC+AGG | + | chr3_3:71719447-71719466 | Msa0469740:intron | 30.0% |
! | CTTGTCTGAAACAAAAATCA+GGG | + | chr3_3:71719448-71719467 | Msa0469740:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | + | chr3_3:71719356-71719375 | Msa0469740:intron | 30.0% |
! | TCTTGTCTGAAACAAAAATC+AGG | + | chr3_3:71719447-71719466 | Msa0469740:intron | 30.0% |
! | CTTGTCTGAAACAAAAATCA+GGG | + | chr3_3:71719448-71719467 | Msa0469740:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | + | chr3_3:71719356-71719375 | Msa0469740:intron | 30.0% |
! | GGAGAATCAAACTATTTTGT+GGG | + | chr3_3:71719357-71719376 | Msa0469740:intron | 30.0% |
ATACTAAAACTGAGTAGTAC+TGG | - | chr3_3:71719751-71719770 | None:intergenic | 30.0% | |
! | AAGTTTGATTGTTTCTTGCA+TGG | + | chr3_3:71720194-71720213 | Msa0469740:intron | 30.0% |
TTCAGAACAGCTCTTAAATA+TGG | + | chr3_3:71720234-71720253 | Msa0469740:intron | 30.0% | |
! | TATTTTGCAGTCAACTCATA+TGG | + | chr3_3:71720335-71720354 | Msa0469740:intron | 30.0% |
ATTTCCAGTGCAAAGATAAA+CGG | - | chr3_3:71720385-71720404 | None:intergenic | 30.0% | |
GATATTTGCTCAATGTCTTT+GGG | - | chr3_3:71720414-71720433 | None:intergenic | 30.0% | |
AGATATTTGCTCAATGTCTT+TGG | - | chr3_3:71720415-71720434 | None:intergenic | 30.0% | |
ACATTGAGCAAATATCTTAC+TGG | + | chr3_3:71720418-71720437 | Msa0469740:CDS | 30.0% | |
TTGATGAAAGACATGTTTGT+CGG | - | chr3_3:71720824-71720843 | None:intergenic | 30.0% | |
CTTGTTAATTGAGCGAATTA+GGG | - | chr3_3:71720994-71721013 | None:intergenic | 30.0% | |
TCTTGTTAATTGAGCGAATT+AGG | - | chr3_3:71720995-71721014 | None:intergenic | 30.0% | |
TTAGGCTATGAAAGGAAAAT+AGG | + | chr3_3:71721083-71721102 | Msa0469740:intron | 30.0% | |
! | AGGCCTTTAAATAAGCTTTT+AGG | + | chr3_3:71721129-71721148 | Msa0469740:intron | 30.0% |
AGGACATAAATACCTATCTT+AGG | + | chr3_3:71721209-71721228 | Msa0469740:intron | 30.0% | |
ACCTATCTTAGGTAACAAAT+CGG | + | chr3_3:71721220-71721239 | Msa0469740:intron | 30.0% | |
!!! | TCAAGTTTTTTTGCAAGTGT+TGG | - | chr3_3:71721253-71721272 | None:intergenic | 30.0% |
CAAAAAAACTTGAGCTTATG+TGG | + | chr3_3:71721260-71721279 | Msa0469740:intron | 30.0% | |
ATGATTGTGGTTGTTCAAAA+AGG | - | chr3_3:71721314-71721333 | None:intergenic | 30.0% | |
TGATATCCAGTTGCATAAAA+CGG | - | chr3_3:71721424-71721443 | None:intergenic | 30.0% | |
TGGATATCAGATTCTTAAAC+CGG | + | chr3_3:71721435-71721454 | Msa0469740:intron | 30.0% | |
TGGATATCAGATTCTTAAAC+CGG | + | chr3_3:71721435-71721454 | Msa0469740:intron | 30.0% | |
TAGATACTAGATATGTAGCA+TGG | + | chr3_3:71721785-71721804 | Msa0469740:intron | 30.0% | |
TCATAAACATGGATCAATGA+TGG | + | chr3_3:71722023-71722042 | Msa0469740:intron | 30.0% | |
! | AACGATTTTACACCAGTATT+AGG | - | chr3_3:71722346-71722365 | None:intergenic | 30.0% |
AATACTGGTGTAAAATCGTT+TGG | + | chr3_3:71722346-71722365 | Msa0469740:three_prime_UTR | 30.0% | |
TAAAATTGAACCGAGAGAAA+TGG | + | chr3_3:71722435-71722454 | Msa0469740:three_prime_UTR | 30.0% | |
AAAATTGAACCGAGAGAAAT+GGG | + | chr3_3:71722436-71722455 | Msa0469740:three_prime_UTR | 30.0% | |
TTAGGGTTTAATAACCATGG+CGG | + | chr3_3:71715058-71715077 | Msa0469740:exon | 35.0% | |
TAACTTCCCCTTTCATTTCT+AGG | + | chr3_3:71715259-71715278 | Msa0469740:intron | 35.0% | |
AACTTCCCCTTTCATTTCTA+GGG | + | chr3_3:71715260-71715279 | Msa0469740:intron | 35.0% | |
! | TTCCTAACTTCCTTTTGTGT+GGG | + | chr3_3:71715565-71715584 | Msa0469740:intron | 35.0% |
! | ACAAGGAAAGCATGGATAAA+TGG | - | chr3_3:71715790-71715809 | None:intergenic | 35.0% |
AAAGTTGAACAAGGAAAGCA+TGG | - | chr3_3:71715798-71715817 | None:intergenic | 35.0% | |
TGAAATGAACCATTGTGATG+GGG | + | chr3_3:71715916-71715935 | Msa0469740:intron | 35.0% | |
TTCTGAATACCGGATAATTC+GGG | + | chr3_3:71716211-71716230 | Msa0469740:intron | 35.0% | |
! | GTGTTGATATCAGCTTAAAG+GGG | - | chr3_3:71716260-71716279 | None:intergenic | 35.0% |
TGAAAATTGACATGGACATG+AGG | - | chr3_3:71716321-71716340 | None:intergenic | 35.0% | |
! | AACAAGACCAGTTTTACAGA+GGG | - | chr3_3:71716544-71716563 | None:intergenic | 35.0% |
! | TAACAAGACCAGTTTTACAG+AGG | - | chr3_3:71716545-71716564 | None:intergenic | 35.0% |
AGTGTTATAGGTCAAGAAAC+TGG | - | chr3_3:71716667-71716686 | None:intergenic | 35.0% | |
AAACCCAATCCCAAAAATAC+GGG | - | chr3_3:71716999-71717018 | None:intergenic | 35.0% | |
CAAACCCAATCCCAAAAATA+CGG | - | chr3_3:71717000-71717019 | None:intergenic | 35.0% | |
!!! | GTATTTTTGGGATTGGGTTT+GGG | + | chr3_3:71716999-71717018 | Msa0469740:intron | 35.0% |
GGCCTAACTCGTTTAATAAA+TGG | + | chr3_3:71717102-71717121 | Msa0469740:intron | 35.0% | |
AATTTAATTAGGCCAGGCTT+AGG | + | chr3_3:71717155-71717174 | Msa0469740:intron | 35.0% | |
!!! | CTTTTTTATAAGCCTAAGCC+TGG | - | chr3_3:71717170-71717189 | None:intergenic | 35.0% |
TAATATACTCGTATACCGAC+CGG | - | chr3_3:71717211-71717230 | None:intergenic | 35.0% | |
AGTACGTTGCACAAATTGAA+AGG | + | chr3_3:71717560-71717579 | Msa0469740:intron | 35.0% | |
! | CACAAACTAGGCTTTTAAAC+AGG | + | chr3_3:71717623-71717642 | Msa0469740:intron | 35.0% |
! | AGGCTTTTAAACAGGCTAAT+AGG | + | chr3_3:71717631-71717650 | Msa0469740:intron | 35.0% |
!! | GCCAGACCAAACTTTTAAAA+AGG | + | chr3_3:71717653-71717672 | Msa0469740:intron | 35.0% |
!! | GCCTTTTTAAAAGTTTGGTC+TGG | - | chr3_3:71717657-71717676 | None:intergenic | 35.0% |
!! | ACCAAACTTTTAAAAAGGCC+AGG | + | chr3_3:71717658-71717677 | Msa0469740:intron | 35.0% |
TAAAGCCTTTGACAGGTAAA+AGG | + | chr3_3:71717693-71717712 | Msa0469740:intron | 35.0% | |
AAAAACTAAGGCCTAAGTCT+TGG | - | chr3_3:71717719-71717738 | None:intergenic | 35.0% | |
!!! | AGGCCTTAGTTTTTTCAACT+AGG | + | chr3_3:71717725-71717744 | Msa0469740:intron | 35.0% |
AGGCCTAGTTGAAAAAACTA+AGG | - | chr3_3:71717731-71717750 | None:intergenic | 35.0% | |
TAGCCTATTTAAGCAAAGCT+CGG | + | chr3_3:71717750-71717769 | Msa0469740:intron | 35.0% | |
AGTGTAGTCTATATAGTGTG+CGG | - | chr3_3:71717865-71717884 | None:intergenic | 35.0% | |
ACTATGATGTGTAATAGGAG+GGG | + | chr3_3:71718025-71718044 | Msa0469740:intron | 35.0% | |
!!! | TTACCCTGTTTTTACACAAG+AGG | - | chr3_3:71718121-71718140 | None:intergenic | 35.0% |
TCTTGTGTAAAAACAGGGTA+AGG | + | chr3_3:71718120-71718139 | Msa0469740:intron | 35.0% | |
! | TTTTTATTAACGCGGGTATG+GGG | + | chr3_3:71718324-71718343 | Msa0469740:intron | 35.0% |
!! | CTATAATGGATTGAAGGCAA+AGG | - | chr3_3:71718405-71718424 | None:intergenic | 35.0% |
GATGCAAACTTCTCGTATTA+TGG | - | chr3_3:71718536-71718555 | None:intergenic | 35.0% | |
! | AAGTTTAATTGTGGCTTGCA+TGG | + | chr3_3:71718633-71718652 | Msa0469740:intron | 35.0% |
CTAAAATGTTGTGAGGATTG+AGG | + | chr3_3:71718892-71718911 | Msa0469740:intron | 35.0% | |
TGTACCACACTATCACTTAA+TGG | - | chr3_3:71718920-71718939 | None:intergenic | 35.0% | |
AAGACAGTATGTGATTCACA+TGG | - | chr3_3:71718957-71718976 | None:intergenic | 35.0% | |
CAAGAAGTGAGACATTTCAA+AGG | - | chr3_3:71719043-71719062 | None:intergenic | 35.0% | |
!! | CTTTGAAATGTCTCACTTCT+TGG | + | chr3_3:71719041-71719060 | Msa0469740:intron | 35.0% |
TAGCAATGGTGATATGAGAA+AGG | + | chr3_3:71719221-71719240 | Msa0469740:CDS | 35.0% | |
!! | AAAGGCACTGAATATTCTTC+AGG | + | chr3_3:71719239-71719258 | Msa0469740:CDS | 35.0% |
! | AGGAGTAGTTGTATTTGTTG+TGG | + | chr3_3:71719336-71719355 | Msa0469740:intron | 35.0% |
TCGAGACAACATCCATTTAA+AGG | + | chr3_3:71719496-71719515 | Msa0469740:intron | 35.0% | |
!! | AGGACTAGTTGTATTTGTTG+TGG | + | chr3_3:71719516-71719535 | Msa0469740:intron | 35.0% |
TCGAGACAACATCCATTTAA+AGG | + | chr3_3:71719496-71719515 | Msa0469740:intron | 35.0% | |
!! | AGGACTAGTTGTATTTGTTG+TGG | + | chr3_3:71719516-71719535 | Msa0469740:intron | 35.0% |
TTACGGTAGCTAGATATACA+TGG | + | chr3_3:71719825-71719844 | Msa0469740:intron | 35.0% | |
TATATCCTGAATTCGGTACA+TGG | + | chr3_3:71720004-71720023 | Msa0469740:intron | 35.0% | |
AGAAAAATTGCGCTCAGATT+TGG | - | chr3_3:71720172-71720191 | None:intergenic | 35.0% | |
TATGAAAACAAGGAAAGGAC+TGG | + | chr3_3:71720567-71720586 | Msa0469740:CDS | 35.0% | |
!! | TTACACTTTGTTGTTGTCAC+AGG | + | chr3_3:71720681-71720700 | Msa0469740:intron | 35.0% |
TGATGAAAGACATGTTTGTC+GGG | - | chr3_3:71720823-71720842 | None:intergenic | 35.0% | |
AGAAAGTGGTATCTTATTGC+TGG | + | chr3_3:71720893-71720912 | Msa0469740:intron | 35.0% | |
GAAAGTGGTATCTTATTGCT+GGG | + | chr3_3:71720894-71720913 | Msa0469740:intron | 35.0% | |
ACAAGATAGATTGCACTCTA+AGG | + | chr3_3:71721009-71721028 | Msa0469740:intron | 35.0% | |
TAGCCTAATAAGAGTCAGTT+GGG | - | chr3_3:71721071-71721090 | None:intergenic | 35.0% | |
ATAGCCTAATAAGAGTCAGT+TGG | - | chr3_3:71721072-71721091 | None:intergenic | 35.0% | |
GACTCTTATTAGGCTATGAA+AGG | + | chr3_3:71721075-71721094 | Msa0469740:intron | 35.0% | |
TAAAGGCCTTACATATGTAC+AGG | - | chr3_3:71721118-71721137 | None:intergenic | 35.0% | |
AAGTCAATCTGTTACTGCTT+TGG | + | chr3_3:71721154-71721173 | Msa0469740:intron | 35.0% | |
ATTTATGTCCTTTCCAGTTG+AGG | - | chr3_3:71721200-71721219 | None:intergenic | 35.0% | |
CCTATCTTAGGTAACAAATC+GGG | + | chr3_3:71721221-71721240 | Msa0469740:intron | 35.0% | |
TATGTGGGCGATGTTTAAAT+TGG | + | chr3_3:71721276-71721295 | Msa0469740:intron | 35.0% | |
TGGTTGTTCAAAAAGGAATC+AGG | - | chr3_3:71721307-71721326 | None:intergenic | 35.0% | |
GTTCTGTTCTTTCATGATTG+TGG | - | chr3_3:71721327-71721346 | None:intergenic | 35.0% | |
ATATCCAGTTGCATAAAACG+GGG | - | chr3_3:71721422-71721441 | None:intergenic | 35.0% | |
GATATCCAGTTGCATAAAAC+GGG | - | chr3_3:71721423-71721442 | None:intergenic | 35.0% | |
TAGTTGTACTGCATGCAATA+TGG | + | chr3_3:71721666-71721685 | Msa0469740:intron | 35.0% | |
CTAAGAACCAGAAAGAAAAC+AGG | - | chr3_3:71722049-71722068 | None:intergenic | 35.0% | |
! | TGCAGGTACAGATTAAGTTT+TGG | + | chr3_3:71722112-71722131 | Msa0469740:intron | 35.0% |
! | GCAGGTACAGATTAAGTTTT+GGG | + | chr3_3:71722113-71722132 | Msa0469740:intron | 35.0% |
TAACCTTCACCTGAATATGA+TGG | + | chr3_3:71722214-71722233 | Msa0469740:exon | 35.0% | |
! | TATCTCGGTGCACATAAATT+AGG | - | chr3_3:71722277-71722296 | None:intergenic | 35.0% |
GATGTACAACGGAAATATCT+CGG | - | chr3_3:71722292-71722311 | None:intergenic | 35.0% | |
AAATTGAACCGAGAGAAATG+GGG | + | chr3_3:71722437-71722456 | Msa0469740:three_prime_UTR | 35.0% | |
ATGAAAGGGGAAGTTAGAGA+GGG | - | chr3_3:71715255-71715274 | None:intergenic | 40.0% | |
AATGAAAGGGGAAGTTAGAG+AGG | - | chr3_3:71715256-71715275 | None:intergenic | 40.0% | |
TAAAACATCGACGATTCTCG+CGG | + | chr3_3:71715401-71715420 | Msa0469740:CDS | 40.0% | |
CTGAATGCTTCAGATGATAG+AGG | + | chr3_3:71715471-71715490 | Msa0469740:CDS | 40.0% | |
AGCACTCAGAGTCTATCATT+TGG | + | chr3_3:71715531-71715550 | Msa0469740:CDS | 40.0% | |
GCACTCAGAGTCTATCATTT+GGG | + | chr3_3:71715532-71715551 | Msa0469740:CDS | 40.0% | |
! | CTTCCTAACTTCCTTTTGTG+TGG | + | chr3_3:71715564-71715583 | Msa0469740:intron | 40.0% |
CAGTAAAACACCCACACAAA+AGG | - | chr3_3:71715578-71715597 | None:intergenic | 40.0% | |
TCGAAGCACATTTCACAGTA+TGG | - | chr3_3:71715726-71715745 | None:intergenic | 40.0% | |
TTATCTTCTCCCCATCACAA+TGG | - | chr3_3:71715928-71715947 | None:intergenic | 40.0% | |
TATCATTCCATCAGCCAATG+CGG | + | chr3_3:71716168-71716187 | Msa0469740:intron | 40.0% | |
TAGATATAGAACCTCCGCAT+TGG | - | chr3_3:71716185-71716204 | None:intergenic | 40.0% | |
AAAGCACATGCAAGCAGAAA+GGG | - | chr3_3:71716395-71716414 | None:intergenic | 40.0% | |
! | AAAAGCACATGCAAGCAGAA+AGG | - | chr3_3:71716396-71716415 | None:intergenic | 40.0% |
! | TGCTTGCATGTGCTTTTGAT+TGG | + | chr3_3:71716399-71716418 | Msa0469740:intron | 40.0% |
!! | GCTTGCATGTGCTTTTGATT+GGG | + | chr3_3:71716400-71716419 | Msa0469740:intron | 40.0% |
AAATTGGGCATCCTTAGTCA+TGG | - | chr3_3:71716581-71716600 | None:intergenic | 40.0% | |
ACCTCTACGTAACGCAAATT+GGG | - | chr3_3:71716596-71716615 | None:intergenic | 40.0% | |
TTGAGCTACATTCTCACGAT+GGG | + | chr3_3:71716963-71716982 | Msa0469740:intron | 40.0% | |
! | GGGTAAACACCCGTATTTTT+GGG | + | chr3_3:71716987-71717006 | Msa0469740:intron | 40.0% |
!!! | AACACCCGTATTTTTGGGAT+TGG | + | chr3_3:71716992-71717011 | Msa0469740:intron | 40.0% |
!!! | ACACCCGTATTTTTGGGATT+GGG | + | chr3_3:71716993-71717012 | Msa0469740:intron | 40.0% |
!!! | CGTATTTTTGGGATTGGGTT+TGG | + | chr3_3:71716998-71717017 | Msa0469740:intron | 40.0% |
TTGGGTAATTACCCGCAAAT+AGG | + | chr3_3:71717017-71717036 | Msa0469740:intron | 40.0% | |
TGGGTAATTACCCGCAAATA+GGG | + | chr3_3:71717018-71717037 | Msa0469740:intron | 40.0% | |
! | GCTTGCTACTAATATGCCTA+AGG | + | chr3_3:71717391-71717410 | Msa0469740:intron | 40.0% |
!! | GCCTGGCCTTTTTAAAAGTT+TGG | - | chr3_3:71717662-71717681 | None:intergenic | 40.0% |
!!! | GCTTTATTTTAAGTCTGGCC+TGG | - | chr3_3:71717679-71717698 | None:intergenic | 40.0% |
GAGCTTTGCTTAAATAGGCT+AGG | - | chr3_3:71717751-71717770 | None:intergenic | 40.0% | |
TATTTAAGCAAAGCTCGGCT+CGG | + | chr3_3:71717755-71717774 | Msa0469740:intron | 40.0% | |
CCATTCAAATTTGCGAGTAG+GGG | - | chr3_3:71717796-71717815 | None:intergenic | 40.0% | |
CCCATTCAAATTTGCGAGTA+GGG | - | chr3_3:71717797-71717816 | None:intergenic | 40.0% | |
CCCTACTCGCAAATTTGAAT+GGG | + | chr3_3:71717794-71717813 | Msa0469740:intron | 40.0% | |
ACCCATTCAAATTTGCGAGT+AGG | - | chr3_3:71717798-71717817 | None:intergenic | 40.0% | |
AAATTTGAATGGGTGTGGTG+CGG | + | chr3_3:71717804-71717823 | Msa0469740:intron | 40.0% | |
GTGTAGTCTATATAGTGTGC+GGG | - | chr3_3:71717864-71717883 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGTA+AGG | + | chr3_3:71718070-71718089 | Msa0469740:intron | 40.0% | |
ACAGCCTCTTGTGTAAAAAC+AGG | + | chr3_3:71718114-71718133 | Msa0469740:intron | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | + | chr3_3:71718115-71718134 | Msa0469740:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr3_3:71718146-71718165 | Msa0469740:intron | 40.0% | |
CATAGTAAAAAAGGGCAACC+CGG | - | chr3_3:71718212-71718231 | None:intergenic | 40.0% | |
! | GGAACCATTAAGTGATAGTG+TGG | + | chr3_3:71718913-71718932 | Msa0469740:intron | 40.0% |
GATGGTAATACATGCTGATC+TGG | + | chr3_3:71719015-71719034 | Msa0469740:intron | 40.0% | |
GCAAGTTACCAATCCCAAAA+TGG | - | chr3_3:71719123-71719142 | None:intergenic | 40.0% | |
!! | CAGGGAAGCTTGTTATAACA+TGG | + | chr3_3:71719466-71719485 | Msa0469740:intron | 40.0% |
!! | CAGGGAAGCTTGTTATAACA+TGG | + | chr3_3:71719466-71719485 | Msa0469740:intron | 40.0% |
!! | ATTAGCACACTTGTTGACTC+AGG | - | chr3_3:71719857-71719876 | None:intergenic | 40.0% |
TAAGACCATGTACCGAATTC+AGG | - | chr3_3:71720012-71720031 | None:intergenic | 40.0% | |
TTCTTCAGTAATCTGCTGAG+AGG | - | chr3_3:71720361-71720380 | None:intergenic | 40.0% | |
TTACCAGGTAGTTGGATGTT+AGG | - | chr3_3:71720642-71720661 | None:intergenic | 40.0% | |
!! | AGTGCAGTTGGTGAATGATT+TGG | + | chr3_3:71720739-71720758 | Msa0469740:CDS | 40.0% |
TTTGTAAGGCTGAGAGAAAG+TGG | + | chr3_3:71720879-71720898 | Msa0469740:intron | 40.0% | |
GTATCTTATTGCTGGGAACA+GGG | + | chr3_3:71720901-71720920 | Msa0469740:intron | 40.0% | |
! | AATTAGGGCCTTTTGGCATT+GGG | - | chr3_3:71720979-71720998 | None:intergenic | 40.0% |
AGTTGGGTAGTTAGAAAGCA+AGG | - | chr3_3:71721055-71721074 | None:intergenic | 40.0% | |
! | CTACCCAACTGACTCTTATT+AGG | + | chr3_3:71721065-71721084 | Msa0469740:intron | 40.0% |
!! | CCCGATTTGTTACCTAAGAT+AGG | - | chr3_3:71721224-71721243 | None:intergenic | 40.0% |
TTAGGTAACAAATCGGGCTA+TGG | + | chr3_3:71721227-71721246 | Msa0469740:intron | 40.0% | |
TATCCAGTTGCATAAAACGG+GGG | - | chr3_3:71721421-71721440 | None:intergenic | 40.0% | |
ACAGCTACGTATACATGTAC+CGG | - | chr3_3:71721457-71721476 | None:intergenic | 40.0% | |
ACAGCTACGTATACATGTAC+CGG | - | chr3_3:71721457-71721476 | None:intergenic | 40.0% | |
AGGTGTACAAATGGTCATTC+AGG | - | chr3_3:71721729-71721748 | None:intergenic | 40.0% | |
CACACAAGTAGGTGTACAAA+TGG | - | chr3_3:71721738-71721757 | None:intergenic | 40.0% | |
GAATGACAAAGCACACAAGT+AGG | - | chr3_3:71721749-71721768 | None:intergenic | 40.0% | |
AGGGGATATGTCTATATTCC+GGG | - | chr3_3:71721834-71721853 | None:intergenic | 40.0% | |
CAGGGGATATGTCTATATTC+CGG | - | chr3_3:71721835-71721854 | None:intergenic | 40.0% | |
GTCAGATGAAGCCAAATTTC+AGG | - | chr3_3:71721929-71721948 | None:intergenic | 40.0% | |
TCTAGCACATACATAACGAC+TGG | - | chr3_3:71721951-71721970 | None:intergenic | 40.0% | |
! | ATGATGGCCTGTTTTCTTTC+TGG | + | chr3_3:71722039-71722058 | Msa0469740:intron | 40.0% |
ATCAGTGCACCATCATATTC+AGG | - | chr3_3:71722226-71722245 | None:intergenic | 40.0% | |
TTTCCGTTGTACATCGTAGA+AGG | + | chr3_3:71722297-71722316 | Msa0469740:three_prime_UTR | 40.0% | |
!! | AGGGAAGACTGTGTTTTGAG+CGG | + | chr3_3:71714921-71714940 | Msa0469740:five_prime_UTR | 45.0% |
TCTGTGAAGTCGATGTCCAT+AGG | - | chr3_3:71715095-71715114 | None:intergenic | 45.0% | |
!! | GACATCGACTTCACAGACAA+GGG | + | chr3_3:71715098-71715117 | Msa0469740:CDS | 45.0% |
TTACCCCATCTGCTGTTGTA+TGG | + | chr3_3:71715363-71715382 | Msa0469740:CDS | 45.0% | |
AGGACCATACAACAGCAGAT+GGG | - | chr3_3:71715370-71715389 | None:intergenic | 45.0% | |
CACCCACACAAAAGGAAGTT+AGG | - | chr3_3:71715570-71715589 | None:intergenic | 45.0% | |
CGCTAATTACTGCTGAACTC+TGG | - | chr3_3:71716132-71716151 | None:intergenic | 45.0% | |
GAGTTCAGCAGTAATTAGCG+TGG | + | chr3_3:71716132-71716151 | Msa0469740:intron | 45.0% | |
CGTCAAACCCTCTGTAAAAC+TGG | + | chr3_3:71716534-71716553 | Msa0469740:CDS | 45.0% | |
TGAAGCAGATGCCATGACTA+AGG | + | chr3_3:71716567-71716586 | Msa0469740:CDS | 45.0% | |
CACCTCTACGTAACGCAAAT+TGG | - | chr3_3:71716597-71716616 | None:intergenic | 45.0% | |
TGCATCTTGATTGCAGTGCT+GGG | - | chr3_3:71716775-71716794 | None:intergenic | 45.0% | |
AATCAAGATGCACCCGGTTT+CGG | + | chr3_3:71716783-71716802 | Msa0469740:CDS | 45.0% | |
TGACATGGACAGCATCAAGA+GGG | - | chr3_3:71716814-71716833 | None:intergenic | 45.0% | |
GTTTCAGTCTCTCAGTGACA+TGG | - | chr3_3:71716829-71716848 | None:intergenic | 45.0% | |
GTTGAGCTACATTCTCACGA+TGG | + | chr3_3:71716962-71716981 | Msa0469740:intron | 45.0% | |
! | CGGGTAAACACCCGTATTTT+TGG | + | chr3_3:71716986-71717005 | Msa0469740:intron | 45.0% |
GGGTAATTACCCGCAAATAG+GGG | + | chr3_3:71717019-71717038 | Msa0469740:intron | 45.0% | |
TAATTACCCGCAAATAGGGG+TGG | + | chr3_3:71717022-71717041 | Msa0469740:intron | 45.0% | |
AATTACCCGCAAATAGGGGT+GGG | + | chr3_3:71717023-71717042 | Msa0469740:intron | 45.0% | |
AAAAGCCTATCAAGCCTACC+AGG | + | chr3_3:71717185-71717204 | Msa0469740:intron | 45.0% | |
!! | CTTGGCCTTTTACCTGTCAA+AGG | - | chr3_3:71717701-71717720 | None:intergenic | 45.0% |
CAGGTAAAAGGCCAAGACTT+AGG | + | chr3_3:71717705-71717724 | Msa0469740:intron | 45.0% | |
GAGCCGAGCTTTGCTTAAAT+AGG | - | chr3_3:71717756-71717775 | None:intergenic | 45.0% | |
TCAAATTTGCGAGTAGGGGT+GGG | - | chr3_3:71717792-71717811 | None:intergenic | 45.0% | |
TTCAAATTTGCGAGTAGGGG+TGG | - | chr3_3:71717793-71717812 | None:intergenic | 45.0% | |
CCCCTACTCGCAAATTTGAA+TGG | + | chr3_3:71717793-71717812 | Msa0469740:intron | 45.0% | |
CTCGCAAATTTGAATGGGTG+TGG | + | chr3_3:71717799-71717818 | Msa0469740:intron | 45.0% | |
AATTTGAATGGGTGTGGTGC+GGG | + | chr3_3:71717805-71717824 | Msa0469740:intron | 45.0% | |
TGTAATAGGAGGGGTAACCT+TGG | + | chr3_3:71718034-71718053 | Msa0469740:intron | 45.0% | |
CAACTTTACCAGTTGAGCCA+AGG | - | chr3_3:71718054-71718073 | None:intergenic | 45.0% | |
GTCATGTGACTGTAAGGTCA+CGG | + | chr3_3:71718076-71718095 | Msa0469740:intron | 45.0% | |
TCATGTGACTGTAAGGTCAC+GGG | + | chr3_3:71718077-71718096 | Msa0469740:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr3_3:71718142-71718161 | Msa0469740:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr3_3:71718145-71718164 | Msa0469740:intron | 45.0% | |
TAGTAAGTACCCTGCCGAAA+GGG | + | chr3_3:71718357-71718376 | Msa0469740:intron | 45.0% | |
AAGGCAAAGGGATCTGTATG+TGG | - | chr3_3:71718392-71718411 | None:intergenic | 45.0% | |
TGCATGTGCATTTCAACTGC+TGG | + | chr3_3:71718752-71718771 | Msa0469740:intron | 45.0% | |
AGGCTTGATGTTCAAGACAG+TGG | + | chr3_3:71719177-71719196 | Msa0469740:intron | 45.0% | |
GTGGCTTATCTGCTCTTGTT+CGG | + | chr3_3:71719196-71719215 | Msa0469740:CDS | 45.0% | |
! | GGCACTGAATATTCTTCAGG+TGG | + | chr3_3:71719242-71719261 | Msa0469740:intron | 45.0% |
TGTGTGAATGCAAGCGAAAG+GGG | - | chr3_3:71719419-71719438 | None:intergenic | 45.0% | |
GTGTGTGAATGCAAGCGAAA+GGG | - | chr3_3:71719420-71719439 | None:intergenic | 45.0% | |
TGTGTGTGAATGCAAGCGAA+AGG | - | chr3_3:71719421-71719440 | None:intergenic | 45.0% | |
TCGCTTGCATTCACACACAA+TGG | + | chr3_3:71719422-71719441 | Msa0469740:intron | 45.0% | |
TGTGTGAATGCAAGCGAAAG+GGG | - | chr3_3:71719419-71719438 | None:intergenic | 45.0% | |
GTGTGTGAATGCAAGCGAAA+GGG | - | chr3_3:71719420-71719439 | None:intergenic | 45.0% | |
TGTGTGTGAATGCAAGCGAA+AGG | - | chr3_3:71719421-71719440 | None:intergenic | 45.0% | |
TCGCTTGCATTCACACACAA+TGG | + | chr3_3:71719422-71719441 | Msa0469740:intron | 45.0% | |
TGTGTCAATGCACACGACAT+GGG | - | chr3_3:71719779-71719798 | None:intergenic | 45.0% | |
! | TCGTGTGCATTGACACACTT+CGG | + | chr3_3:71719782-71719801 | Msa0469740:intron | 45.0% |
GAAGCCGTTTATCTTTGCAC+TGG | + | chr3_3:71720378-71720397 | Msa0469740:CDS | 45.0% | |
CATCCTAACATCCAACTACC+TGG | + | chr3_3:71720636-71720655 | Msa0469740:intron | 45.0% | |
ATTCACCAACTGCACTCGAA+CGG | - | chr3_3:71720735-71720754 | None:intergenic | 45.0% | |
TGTTTGTCGGGTCAAGCATA+AGG | - | chr3_3:71720811-71720830 | None:intergenic | 45.0% | |
GGTATCTTATTGCTGGGAAC+AGG | + | chr3_3:71720900-71720919 | Msa0469740:intron | 45.0% | |
! | TCCACGCTGACTACAAACAA+TGG | + | chr3_3:71720929-71720948 | Msa0469740:intron | 45.0% |
! | GAATTAGGGCCTTTTGGCAT+TGG | - | chr3_3:71720980-71720999 | None:intergenic | 45.0% |
! | TTGAGCGAATTAGGGCCTTT+TGG | - | chr3_3:71720986-71721005 | None:intergenic | 45.0% |
! | CAAGGCATGTTGCTTAAGAG+GGG | - | chr3_3:71721037-71721056 | None:intergenic | 45.0% |
! | GCAAGGCATGTTGCTTAAGA+GGG | - | chr3_3:71721038-71721057 | None:intergenic | 45.0% |
! | AGCAAGGCATGTTGCTTAAG+AGG | - | chr3_3:71721039-71721058 | None:intergenic | 45.0% |
GAAAGGAAAATAGGCTCCTC+AGG | + | chr3_3:71721092-71721111 | Msa0469740:intron | 45.0% | |
CTTACATATGTACAGGCCTG+AGG | - | chr3_3:71721111-71721130 | None:intergenic | 45.0% | |
CTCAGGCCTGTACATATGTA+AGG | + | chr3_3:71721109-71721128 | Msa0469740:intron | 45.0% | |
ATCCAGTTGCATAAAACGGG+GGG | - | chr3_3:71721420-71721439 | None:intergenic | 45.0% | |
TTTGTCATTCTCACGCGTCT+AGG | + | chr3_3:71721759-71721778 | Msa0469740:intron | 45.0% | |
! | ATTAAGTCTGAAGTGGGGTG+AGG | - | chr3_3:71721866-71721885 | None:intergenic | 45.0% |
! | GGGACATTAAGTCTGAAGTG+GGG | - | chr3_3:71721871-71721890 | None:intergenic | 45.0% |
! | CGGGACATTAAGTCTGAAGT+GGG | - | chr3_3:71721872-71721891 | None:intergenic | 45.0% |
ACGGGACATTAAGTCTGAAG+TGG | - | chr3_3:71721873-71721892 | None:intergenic | 45.0% | |
GAAGCCAAATTTCAGGCACT+CGG | - | chr3_3:71721922-71721941 | None:intergenic | 45.0% | |
TGCAACGATAAGCTTCAGCT+TGG | + | chr3_3:71722136-71722155 | Msa0469740:CDS | 45.0% | |
TACACGTGCTAGATCTGCAA+TGG | + | chr3_3:71722177-71722196 | Msa0469740:CDS | 45.0% | |
GCACCATCATATTCAGGTGA+AGG | - | chr3_3:71722220-71722239 | None:intergenic | 45.0% | |
CCTCCTTCTACGATGTACAA+CGG | - | chr3_3:71722303-71722322 | None:intergenic | 45.0% | |
! | TGGTGCTAACAGCCTAATAC+TGG | + | chr3_3:71722331-71722350 | Msa0469740:three_prime_UTR | 45.0% |
! | GGTTATGTTGACTGCTCTGA+TGG | + | chr3_3:71722367-71722386 | Msa0469740:three_prime_UTR | 45.0% |
!! | ATAATAATAACAATAATAAA+TGG | - | chr3_3:71720138-71720157 | None:intergenic | 5.0% |
!! | GGGAAGACTGTGTTTTGAGC+GGG | + | chr3_3:71714922-71714941 | Msa0469740:five_prime_UTR | 50.0% |
GGGTTTAATAACCATGGCGG+AGG | + | chr3_3:71715061-71715080 | Msa0469740:exon | 50.0% | |
!! | GGACATCGACTTCACAGACA+AGG | + | chr3_3:71715097-71715116 | Msa0469740:CDS | 50.0% |
AAGCTTTGCCACCGAAGGAA+GGG | - | chr3_3:71715148-71715167 | None:intergenic | 50.0% | |
! | TACTTGTGTCGACGATGTCG+CGG | - | chr3_3:71715223-71715242 | None:intergenic | 50.0% |
GGGGAAGTTAGAGAGGGAAA+GGG | - | chr3_3:71715249-71715268 | None:intergenic | 50.0% | |
AGGGGAAGTTAGAGAGGGAA+AGG | - | chr3_3:71715250-71715269 | None:intergenic | 50.0% | |
GGACCATACAACAGCAGATG+GGG | - | chr3_3:71715369-71715388 | None:intergenic | 50.0% | |
GAGGACCATACAACAGCAGA+TGG | - | chr3_3:71715371-71715390 | None:intergenic | 50.0% | |
GTTGTATGGTCCTCCTGGAA+CGG | + | chr3_3:71715377-71715396 | Msa0469740:CDS | 50.0% | |
TTGTATGGTCCTCCTGGAAC+GGG | + | chr3_3:71715378-71715397 | Msa0469740:CDS | 50.0% | |
! | GATGTTTTACCCGTTCCAGG+AGG | - | chr3_3:71715390-71715409 | None:intergenic | 50.0% |
! | GTCGATGTTTTACCCGTTCC+AGG | - | chr3_3:71715393-71715412 | None:intergenic | 50.0% |
GCGGTGGCGCGAAAATTATA+CGG | + | chr3_3:71715420-71715439 | Msa0469740:CDS | 50.0% | |
GCCCAATTTGCGTTACGTAG+AGG | + | chr3_3:71716592-71716611 | Msa0469740:CDS | 50.0% | |
GTGCATCTTGATTGCAGTGC+TGG | - | chr3_3:71716776-71716795 | None:intergenic | 50.0% | |
CACTGCAATCAAGATGCACC+CGG | + | chr3_3:71716777-71716796 | Msa0469740:CDS | 50.0% | |
GACATGGACAGCATCAAGAG+GGG | - | chr3_3:71716813-71716832 | None:intergenic | 50.0% | |
GTGACATGGACAGCATCAAG+AGG | - | chr3_3:71716815-71716834 | None:intergenic | 50.0% | |
AGCTACATTCTCACGATGGG+CGG | + | chr3_3:71716966-71716985 | Msa0469740:intron | 50.0% | |
CTATTCCCACCCCTATTTGC+GGG | - | chr3_3:71717031-71717050 | None:intergenic | 50.0% | |
CCTATTCCCACCCCTATTTG+CGG | - | chr3_3:71717032-71717051 | None:intergenic | 50.0% | |
! | CTTTTAGTAGGCCGAGCCAT+AGG | - | chr3_3:71717074-71717093 | None:intergenic | 50.0% |
! | TCTATATAGTGTGCGGGCTG+CGG | - | chr3_3:71717858-71717877 | None:intergenic | 50.0% |
AAGGTCACGGGTTCAAGTCT+TGG | + | chr3_3:71718089-71718108 | Msa0469740:intron | 50.0% | |
CTGAAGCTCCCGCATATGTA+GGG | - | chr3_3:71718185-71718204 | None:intergenic | 50.0% | |
ACTGAAGCTCCCGCATATGT+AGG | - | chr3_3:71718186-71718205 | None:intergenic | 50.0% | |
TATTAACGCGGGTATGGGGA+TGG | + | chr3_3:71718328-71718347 | Msa0469740:intron | 50.0% | |
ATTAACGCGGGTATGGGGAT+GGG | + | chr3_3:71718329-71718348 | Msa0469740:intron | 50.0% | |
GTAGTAAGTACCCTGCCGAA+AGG | + | chr3_3:71718356-71718375 | Msa0469740:intron | 50.0% | |
AGGGATCTGTATGTGGCACA+GGG | - | chr3_3:71718385-71718404 | None:intergenic | 50.0% | |
AAGGGATCTGTATGTGGCAC+AGG | - | chr3_3:71718386-71718405 | None:intergenic | 50.0% | |
GCTCTTGTTCGGCTTAGCAA+TGG | + | chr3_3:71719207-71719226 | Msa0469740:CDS | 50.0% | |
GTGTGAATGCAAGCGAAAGG+GGG | - | chr3_3:71719418-71719437 | None:intergenic | 50.0% | |
GTGTGAATGCAAGCGAAAGG+GGG | - | chr3_3:71719418-71719437 | None:intergenic | 50.0% | |
GTGTCAATGCACACGACATG+GGG | - | chr3_3:71719778-71719797 | None:intergenic | 50.0% | |
GTGTGTCAATGCACACGACA+TGG | - | chr3_3:71719780-71719799 | None:intergenic | 50.0% | |
TGCTCAATGTCTTTGGGCAG+TGG | - | chr3_3:71720408-71720427 | None:intergenic | 50.0% | |
GCCATTGTTTGTAGTCAGCG+TGG | - | chr3_3:71720933-71720952 | None:intergenic | 50.0% | |
TGAGTAGCCTGAACCTCAAC+TGG | + | chr3_3:71721184-71721203 | Msa0469740:intron | 50.0% | |
AGCCTGAACCTCAACTGGAA+AGG | + | chr3_3:71721189-71721208 | Msa0469740:intron | 50.0% | |
GTCCTTTCCAGTTGAGGTTC+AGG | - | chr3_3:71721194-71721213 | None:intergenic | 50.0% | |
TCCAGTTGCATAAAACGGGG+GGG | - | chr3_3:71721419-71721438 | None:intergenic | 50.0% | |
GGGAAGAGCTACTATGCAAC+TGG | + | chr3_3:71721534-71721553 | Msa0469740:intron | 50.0% | |
TGGGGTGAGGAGAAAGAACA+GGG | - | chr3_3:71721853-71721872 | None:intergenic | 50.0% | |
AAAGAAGGACGACGCTGCAA+CGG | - | chr3_3:71721892-71721911 | None:intergenic | 50.0% | |
! | AGCGTCGTCCTTCTTTTCAG+TGG | + | chr3_3:71721896-71721915 | Msa0469740:intron | 50.0% |
CCGTTGTACATCGTAGAAGG+AGG | + | chr3_3:71722300-71722319 | Msa0469740:three_prime_UTR | 50.0% | |
!! | ACATCGTAGAAGGAGGCATC+AGG | + | chr3_3:71722307-71722326 | Msa0469740:three_prime_UTR | 50.0% |
AGGATAAGTCTCCTCCGCCA+TGG | - | chr3_3:71715075-71715094 | None:intergenic | 55.0% | |
GGCGGAGGAGACTTATCCTA+TGG | + | chr3_3:71715076-71715095 | Msa0469740:CDS | 55.0% | |
GAAGCTTTGCCACCGAAGGA+AGG | - | chr3_3:71715149-71715168 | None:intergenic | 55.0% | |
TAGCGAAGCTTTGCCACCGA+AGG | - | chr3_3:71715153-71715172 | None:intergenic | 55.0% | |
TCGGTGGCAAAGCTTCGCTA+TGG | + | chr3_3:71715153-71715172 | Msa0469740:CDS | 55.0% | |
CGGTGGCAAAGCTTCGCTAT+GGG | + | chr3_3:71715154-71715173 | Msa0469740:CDS | 55.0% | |
GCAACATCGTCGAGGGATTG+AGG | - | chr3_3:71715194-71715213 | None:intergenic | 55.0% | |
GTGAGCTGCAACATCGTCGA+GGG | - | chr3_3:71715201-71715220 | None:intergenic | 55.0% | |
CTGCTGTTGTATGGTCCTCC+TGG | + | chr3_3:71715372-71715391 | Msa0469740:CDS | 55.0% | |
AACATCGACGATTCTCGCGG+TGG | + | chr3_3:71715404-71715423 | Msa0469740:CDS | 55.0% | |
CATTCCATCAGCCAATGCGG+AGG | + | chr3_3:71716171-71716190 | Msa0469740:intron | 55.0% | |
!! | AGAACCTCCGCATTGGCTGA+TGG | - | chr3_3:71716178-71716197 | None:intergenic | 55.0% |
AAGAGGGGCAAACCGAAACC+GGG | - | chr3_3:71716798-71716817 | None:intergenic | 55.0% | |
CAAGAGGGGCAAACCGAAAC+CGG | - | chr3_3:71716799-71716818 | None:intergenic | 55.0% | |
GCTACATTCTCACGATGGGC+GGG | + | chr3_3:71716967-71716986 | Msa0469740:intron | 55.0% | |
CCGCAAATAGGGGTGGGAAT+AGG | + | chr3_3:71717029-71717048 | Msa0469740:intron | 55.0% | |
AATAGGGGTGGGAATAGGCC+AGG | + | chr3_3:71717034-71717053 | Msa0469740:intron | 55.0% | |
GGCTCGGCCTACTAAAAGCT+CGG | + | chr3_3:71717076-71717095 | Msa0469740:intron | 55.0% | |
GGCCTACTAAAAGCTCGGCT+CGG | + | chr3_3:71717081-71717100 | Msa0469740:intron | 55.0% | |
! | TATATAGTGTGCGGGCTGCG+GGG | - | chr3_3:71717856-71717875 | None:intergenic | 55.0% |
! | CTATATAGTGTGCGGGCTGC+GGG | - | chr3_3:71717857-71717876 | None:intergenic | 55.0% |
AGGGGTAACCTTGGCTCAAC+TGG | + | chr3_3:71718043-71718062 | Msa0469740:intron | 55.0% | |
CATATGTAGGGTCCGGGAAG+GGG | - | chr3_3:71718173-71718192 | None:intergenic | 55.0% | |
GCATATGTAGGGTCCGGGAA+GGG | - | chr3_3:71718174-71718193 | None:intergenic | 55.0% | |
CTTCCCGGACCCTACATATG+CGG | + | chr3_3:71718173-71718192 | Msa0469740:intron | 55.0% | |
TTCCCGGACCCTACATATGC+GGG | + | chr3_3:71718174-71718193 | Msa0469740:intron | 55.0% | |
! | TGTGGCACAGGGTACCCTTT+CGG | - | chr3_3:71718374-71718393 | None:intergenic | 55.0% |
GCCTACCTCCCAATGCCAAA+AGG | + | chr3_3:71720968-71720987 | Msa0469740:intron | 55.0% | |
!! | GCCTTTTGGCATTGGGAGGT+AGG | - | chr3_3:71720972-71720991 | None:intergenic | 55.0% |
!! | TAGGGCCTTTTGGCATTGGG+AGG | - | chr3_3:71720976-71720995 | None:intergenic | 55.0% |
AGTTGCATAAAACGGGGGGG+GGG | - | chr3_3:71721416-71721435 | None:intergenic | 55.0% | |
CAGTTGCATAAAACGGGGGG+GGG | - | chr3_3:71721417-71721436 | None:intergenic | 55.0% | |
CCAGTTGCATAAAACGGGGG+GGG | - | chr3_3:71721418-71721437 | None:intergenic | 55.0% | |
GGGGTGAGGAGAAAGAACAG+GGG | - | chr3_3:71721852-71721871 | None:intergenic | 55.0% | |
GTGGGGTGAGGAGAAAGAAC+AGG | - | chr3_3:71721854-71721873 | None:intergenic | 55.0% | |
AAGAAGGACGACGCTGCAAC+GGG | - | chr3_3:71721891-71721910 | None:intergenic | 55.0% | |
GCACTCGGCCACTGAAAAGA+AGG | - | chr3_3:71721907-71721926 | None:intergenic | 55.0% | |
GTGGCCGAGTGCCTGAAATT+TGG | + | chr3_3:71721915-71721934 | Msa0469740:intron | 55.0% | |
!! | CGTAGAAGGAGGCATCAGGA+TGG | + | chr3_3:71722311-71722330 | Msa0469740:three_prime_UTR | 55.0% |
GGCAAAACCGTCATTGCCGC+CGG | + | chr3_3:71715119-71715138 | Msa0469740:CDS | 60.0% | |
AGGGTTACCGGCGGCAATGA+CGG | - | chr3_3:71715129-71715148 | None:intergenic | 60.0% | |
ACCGAAGGAAGGGTTACCGG+CGG | - | chr3_3:71715138-71715157 | None:intergenic | 60.0% | |
GCCACCGAAGGAAGGGTTAC+CGG | - | chr3_3:71715141-71715160 | None:intergenic | 60.0% | |
GGTGAGCTGCAACATCGTCG+AGG | - | chr3_3:71715202-71715221 | None:intergenic | 60.0% | |
! | GGCCGAGCCGAGCTTTTAGT+AGG | - | chr3_3:71717086-71717105 | None:intergenic | 60.0% |
GCCTATCAAGCCTACCAGGC+CGG | + | chr3_3:71717189-71717208 | Msa0469740:intron | 60.0% | |
ACCGGCCTGGTAGGCTTGAT+AGG | - | chr3_3:71717193-71717212 | None:intergenic | 60.0% | |
ATCAAGCCTACCAGGCCGGT+CGG | + | chr3_3:71717193-71717212 | Msa0469740:intron | 60.0% | |
TACTCGTATACCGACCGGCC+TGG | - | chr3_3:71717206-71717225 | None:intergenic | 60.0% | |
AGTAGGGGTGGGAATGAGCC+GGG | - | chr3_3:71717781-71717800 | None:intergenic | 60.0% | |
GAGTAGGGGTGGGAATGAGC+CGG | - | chr3_3:71717782-71717801 | None:intergenic | 60.0% | |
AATGGGTGTGGTGCGGGTGT+GGG | + | chr3_3:71717811-71717830 | Msa0469740:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr3_3:71718158-71718177 | Msa0469740:intron | 60.0% |
CGCATATGTAGGGTCCGGGA+AGG | - | chr3_3:71718175-71718194 | None:intergenic | 60.0% | |
CTCCCGCATATGTAGGGTCC+GGG | - | chr3_3:71718179-71718198 | None:intergenic | 60.0% | |
GCTCCCGCATATGTAGGGTC+CGG | - | chr3_3:71718180-71718199 | None:intergenic | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | + | chr3_3:71718190-71718209 | Msa0469740:intron | 60.0% | |
! | CACAGGGTACCCTTTCGGCA+GGG | - | chr3_3:71718369-71718388 | None:intergenic | 60.0% |
AACTGCACTCGAACGGCTGG+CGG | - | chr3_3:71720728-71720747 | None:intergenic | 60.0% | |
ACCAACTGCACTCGAACGGC+TGG | - | chr3_3:71720731-71720750 | None:intergenic | 60.0% | |
TTGCATAAAACGGGGGGGGG+GGG | - | chr3_3:71721414-71721433 | None:intergenic | 60.0% | |
GTTGCATAAAACGGGGGGGG+GGG | - | chr3_3:71721415-71721434 | None:intergenic | 60.0% | |
! | CCCCCCCCGTTTTATGCAAC+TGG | + | chr3_3:71721415-71721434 | Msa0469740:intron | 60.0% |
GCCGCCGGTAACCCTTCCTT+CGG | + | chr3_3:71715134-71715153 | Msa0469740:CDS | 65.0% | |
GCCGGTAACCCTTCCTTCGG+TGG | + | chr3_3:71715137-71715156 | Msa0469740:CDS | 65.0% | |
AATAGGCCAGGCCGCTCGTC+AGG | + | chr3_3:71717046-71717065 | Msa0469740:intron | 65.0% | |
ATAGGCCAGGCCGCTCGTCA+GGG | + | chr3_3:71717047-71717066 | Msa0469740:intron | 65.0% | |
AGCCATAGGCCCCTGACGAG+CGG | - | chr3_3:71717060-71717079 | None:intergenic | 65.0% | |
CTCGTCAGGGGCCTATGGCT+CGG | + | chr3_3:71717060-71717079 | Msa0469740:intron | 65.0% | |
CGTATACCGACCGGCCTGGT+AGG | - | chr3_3:71717202-71717221 | None:intergenic | 65.0% | |
!! | AAGCAAAGCTCGGCTCGGCC+CGG | + | chr3_3:71717760-71717779 | Msa0469740:intron | 65.0% |
GAATGGGTGTGGTGCGGGTG+TGG | + | chr3_3:71717810-71717829 | Msa0469740:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr3_3:71718160-71718179 | None:intergenic | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | + | chr3_3:71718191-71718210 | Msa0469740:intron | 65.0% | |
! | GCACAGGGTACCCTTTCGGC+AGG | - | chr3_3:71718370-71718389 | None:intergenic | 65.0% |
GCCAGCCGTTCGAGTGCAGT+TGG | + | chr3_3:71720727-71720746 | Msa0469740:CDS | 65.0% | |
TGCATAAAACGGGGGGGGGG+GGG | - | chr3_3:71721413-71721432 | None:intergenic | 65.0% | |
TAGGCCAGGCCGCTCGTCAG+GGG | + | chr3_3:71717048-71717067 | Msa0469740:intron | 70.0% | |
! | ATAGTGTGCGGGCTGCGGGG+CGG | - | chr3_3:71717853-71717872 | None:intergenic | 70.0% |
ATAAAACGGGGGGGGGGGGG+GGG | - | chr3_3:71721410-71721429 | None:intergenic | 70.0% | |
CATAAAACGGGGGGGGGGGG+GGG | - | chr3_3:71721411-71721430 | None:intergenic | 70.0% | |
GCATAAAACGGGGGGGGGGG+GGG | - | chr3_3:71721412-71721431 | None:intergenic | 70.0% | |
TAGGCCCCTGACGAGCGGCC+TGG | - | chr3_3:71717055-71717074 | None:intergenic | 75.0% | |
GGCCGCTCGTCAGGGGCCTA+TGG | + | chr3_3:71717055-71717074 | Msa0469740:intron | 75.0% | |
TAAAACGGGGGGGGGGGGGG+GGG | - | chr3_3:71721409-71721428 | None:intergenic | 75.0% | |
!! | TGCGGGCTGCGGGGCGGACT+GGG | - | chr3_3:71717847-71717866 | None:intergenic | 80.0% |
! | AAAACGGGGGGGGGGGGGGG+GGG | - | chr3_3:71721408-71721427 | None:intergenic | 80.0% |
!! | GTGCGGGCTGCGGGGCGGAC+TGG | - | chr3_3:71717848-71717867 | None:intergenic | 85.0% |
! | AAACGGGGGGGGGGGGGGGG+GGG | - | chr3_3:71721407-71721426 | None:intergenic | 85.0% |
! | GGGGGGGGGGGGGGCGGCAA+AGG | - | chr3_3:71721394-71721413 | None:intergenic | 90.0% |
! | AACGGGGGGGGGGGGGGGGG+GGG | - | chr3_3:71721406-71721425 | None:intergenic | 90.0% |
! | ACGGGGGGGGGGGGGGGGGG+GGG | - | chr3_3:71721405-71721424 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_3 | gene | 71714908 | 71722464 | 71714908 | ID=Msa0469740;Name=Msa0469740 |
chr3_3 | mRNA | 71714908 | 71722464 | 71714908 | ID=Msa0469740-mRNA-1;Parent=Msa0469740;Name=Msa0469740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|1|1|9|248|355 |
chr3_3 | exon | 71714908 | 71715239 | 71714908 | ID=Msa0469740-mRNA-1:exon:17657;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71715337 | 71715553 | 71715337 | ID=Msa0469740-mRNA-1:exon:17658;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71716534 | 71716613 | 71716534 | ID=Msa0469740-mRNA-1:exon:17659;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71716708 | 71716867 | 71716708 | ID=Msa0469740-mRNA-1:exon:17660;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71719179 | 71719260 | 71719179 | ID=Msa0469740-mRNA-1:exon:17661;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71720345 | 71720474 | 71720345 | ID=Msa0469740-mRNA-1:exon:17662;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71720557 | 71720620 | 71720557 | ID=Msa0469740-mRNA-1:exon:17663;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71720703 | 71720771 | 71720703 | ID=Msa0469740-mRNA-1:exon:17664;Parent=Msa0469740-mRNA-1 |
chr3_3 | exon | 71722117 | 71722464 | 71722117 | ID=Msa0469740-mRNA-1:exon:17665;Parent=Msa0469740-mRNA-1 |
chr3_3 | five_prime_UTR | 71714908 | 71715073 | 71714908 | ID=Msa0469740-mRNA-1:five_prime_utr;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71715074 | 71715239 | 71715074 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71715337 | 71715553 | 71715337 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71716534 | 71716613 | 71716534 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71716708 | 71716867 | 71716708 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71719179 | 71719260 | 71719179 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71720345 | 71720474 | 71720345 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71720557 | 71720620 | 71720557 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71720703 | 71720771 | 71720703 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | CDS | 71722117 | 71722216 | 71722117 | ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1 |
chr3_3 | three_prime_UTR | 71722217 | 71722464 | 71722217 | ID=Msa0469740-mRNA-1:three_prime_utr;Parent=Msa0469740-mRNA-1 |
Gene Sequence |
Protein sequence |