AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0469740


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469740 MtrunA17_Chr3g0124791 98.873 355 4 0 1 355 1 355 0.0 728
Msa0469740 MtrunA17_Chr4g0057341 37.346 324 192 4 34 353 17 333 3.08e-67 215
Msa0469740 MtrunA17_Chr3g0125031 47.368 209 104 2 34 236 11 219 1.11e-63 206
Msa0469740 MtrunA17_Chr6g0478631 24.370 357 227 6 33 353 2 351 2.37e-32 124
Msa0469740 MtrunA17_Chr6g0460841 24.496 347 219 6 33 343 2 341 2.54e-32 124
Msa0469740 MtrunA17_Chr3g0145801 21.493 335 217 12 2 304 394 714 1.28e-14 75.1
Msa0469740 MtrunA17_Chr5g0404521 21.484 256 167 6 33 264 413 658 7.21e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0469740 AT1G77470.1 77.027 370 67 4 1 354 1 368 0.0 577
Msa0469740 AT1G63160.1 38.365 318 185 4 34 347 17 327 2.83e-67 215
Msa0469740 AT1G21690.1 38.671 331 183 6 34 350 11 335 5.20e-66 212
Msa0469740 AT1G21690.3 48.402 219 106 3 34 245 11 229 8.37e-66 212
Msa0469740 AT1G21690.4 38.485 330 178 6 34 350 11 328 2.29e-64 207
Msa0469740 AT1G21690.2 38.369 331 172 7 34 350 11 323 4.75e-64 207
Msa0469740 AT5G27740.1 26.705 352 205 8 33 343 2 341 8.03e-36 134
Msa0469740 AT1G14460.1 23.404 235 156 4 36 249 426 657 1.85e-11 66.2
Msa0469740 AT5G45720.2 22.026 227 159 5 34 245 345 568 3.86e-11 65.1
Msa0469740 AT5G45720.1 22.026 227 159 5 34 245 345 568 3.88e-11 65.1
Msa0469740 AT1G24290.1 31.739 230 129 11 36 249 105 322 4.62e-11 64.3
Msa0469740 AT2G02480.2 22.609 230 155 3 36 245 453 679 8.45e-11 63.9
Msa0469740 AT2G02480.1 22.609 230 155 3 36 245 453 679 8.45e-11 63.9

Find 100 sgRNAs with CRISPR-Local

Find 545 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTCTACGTAACGCAAAT+TGG 0.189548 3_3:-71716594 None:intergenic
CCGAGAGAAATGGGGCTTAA+TGG 0.221849 3_3:+71722445 Msa0469740:three_prime_UTR
AGATATTTGCTCAATGTCTT+TGG 0.248728 3_3:-71720412 None:intergenic
TGTTTCGTTTGTTTAACTTT+TGG 0.262447 3_3:+71722394 Msa0469740:three_prime_UTR
CAGTAACACACAAGATTGTT+AGG 0.277932 3_3:+71714901 None:intergenic
TATCTCGGTGCACATAAATT+AGG 0.293780 3_3:-71722274 None:intergenic
TCAGTATCATAATATGATTT+TGG 0.311016 3_3:+71715446 Msa0469740:CDS
ACATTGAGCAAATATCTTAC+TGG 0.344071 3_3:+71720418 Msa0469740:CDS
TGCAGGTACAGATTAAGTTT+TGG 0.348480 3_3:+71722112 Msa0469740:intron
TAAAATTGAACCGAGAGAAA+TGG 0.361007 3_3:+71722435 Msa0469740:three_prime_UTR
CGTCAAACCCTCTGTAAAAC+TGG 0.370275 3_3:+71716534 Msa0469740:CDS
AATCAAGATGCACCCGGTTT+CGG 0.378472 3_3:+71716783 Msa0469740:CDS
AAAATTGAACCGAGAGAAAT+GGG 0.378938 3_3:+71722436 Msa0469740:three_prime_UTR
GATATTTGCTCAATGTCTTT+GGG 0.389281 3_3:-71720411 None:intergenic
GTGCATCTTGATTGCAGTGC+TGG 0.392350 3_3:-71716773 None:intergenic
TTTCCGTTGTACATCGTAGA+AGG 0.393244 3_3:+71722297 Msa0469740:three_prime_UTR
CTGCTGTTGTATGGTCCTCC+TGG 0.395722 3_3:+71715372 Msa0469740:CDS
CAAGAGGGGCAAACCGAAAC+CGG 0.396956 3_3:-71716796 None:intergenic
AGCACTCAGAGTCTATCATT+TGG 0.402934 3_3:+71715531 Msa0469740:CDS
GCCACCGAAGGAAGGGTTAC+CGG 0.403122 3_3:-71715138 None:intergenic
ACCTCTACGTAACGCAAATT+GGG 0.410660 3_3:-71716593 None:intergenic
TGCTCAATGTCTTTGGGCAG+TGG 0.410840 3_3:-71720405 None:intergenic
GCACTCAGAGTCTATCATTT+GGG 0.412330 3_3:+71715532 Msa0469740:CDS
AAAGGCACTGAATATTCTTC+AGG 0.412974 3_3:+71719239 Msa0469740:CDS
AATACTGGTGTAAAATCGTT+TGG 0.419316 3_3:+71722346 Msa0469740:three_prime_UTR
GGTTATGTTGACTGCTCTGA+TGG 0.433944 3_3:+71722367 Msa0469740:three_prime_UTR
AGTGCAGTTGGTGAATGATT+TGG 0.434023 3_3:+71720739 Msa0469740:CDS
GTGGCTTATCTGCTCTTGTT+CGG 0.434803 3_3:+71719196 Msa0469740:CDS
TGGTGCTAACAGCCTAATAC+TGG 0.441635 3_3:+71722331 Msa0469740:three_prime_UTR
ACCAACTGCACTCGAACGGC+TGG 0.444902 3_3:-71720728 None:intergenic
TTGTATGGTCCTCCTGGAAC+GGG 0.453099 3_3:+71715378 Msa0469740:CDS
GCCGCCGGTAACCCTTCCTT+CGG 0.453827 3_3:+71715134 Msa0469740:CDS
ATCAGTGCACCATCATATTC+AGG 0.461846 3_3:-71722223 None:intergenic
TTTCAGTAAGAAAATAGAAA+TGG 0.470080 3_3:-71714979 None:intergenic
TTACCCCATCTGCTGTTGTA+TGG 0.471783 3_3:+71715363 Msa0469740:CDS
TCGGTGGCAAAGCTTCGCTA+TGG 0.473250 3_3:+71715153 Msa0469740:CDS
ATTTCCAGTGCAAAGATAAA+CGG 0.476730 3_3:-71720382 None:intergenic
CCATTAAGCCCCATTTCTCT+CGG 0.484721 3_3:-71722445 None:intergenic
ACATCGTAGAAGGAGGCATC+AGG 0.497206 3_3:+71722307 Msa0469740:three_prime_UTR
CGGTGGCAAAGCTTCGCTAT+GGG 0.498078 3_3:+71715154 Msa0469740:CDS
GAAGCCGTTTATCTTTGCAC+TGG 0.505763 3_3:+71720378 Msa0469740:CDS
GCAACATCGTCGAGGGATTG+AGG 0.509495 3_3:-71715191 None:intergenic
GGCGGAGGAGACTTATCCTA+TGG 0.511189 3_3:+71715076 Msa0469740:CDS
GTTGTATGGTCCTCCTGGAA+CGG 0.512128 3_3:+71715377 Msa0469740:CDS
GCGGTGGCGCGAAAATTATA+CGG 0.514722 3_3:+71715420 Msa0469740:CDS
CTGAATGCTTCAGATGATAG+AGG 0.516669 3_3:+71715471 Msa0469740:CDS
TGAAGCAGATGCCATGACTA+AGG 0.516889 3_3:+71716567 Msa0469740:CDS
GAAGCTTTGCCACCGAAGGA+AGG 0.543002 3_3:-71715146 None:intergenic
TGCATCTTGATTGCAGTGCT+GGG 0.544244 3_3:-71716772 None:intergenic
GCCGGTAACCCTTCCTTCGG+TGG 0.549196 3_3:+71715137 Msa0469740:CDS
AGTAACACACAAGATTGTTA+GGG 0.550275 3_3:+71714902 None:intergenic
GGCAAAACCGTCATTGCCGC+CGG 0.553759 3_3:+71715119 Msa0469740:CDS
GCTCTTGTTCGGCTTAGCAA+TGG 0.554174 3_3:+71719207 Msa0469740:CDS
GCCAGCCGTTCGAGTGCAGT+TGG 0.554697 3_3:+71720727 Msa0469740:CDS
TGCAACGATAAGCTTCAGCT+TGG 0.555547 3_3:+71722136 Msa0469740:CDS
AGGGTTACCGGCGGCAATGA+CGG 0.559162 3_3:-71715126 None:intergenic
GAGGACCATACAACAGCAGA+TGG 0.563295 3_3:-71715368 None:intergenic
GGGTTTAATAACCATGGCGG+AGG 0.566041 3_3:+71715061 Msa0469740:exon
TAGCAATGGTGATATGAGAA+AGG 0.575803 3_3:+71719221 Msa0469740:CDS
TACACGTGCTAGATCTGCAA+TGG 0.578841 3_3:+71722177 Msa0469740:CDS
TCTGTGAAGTCGATGTCCAT+AGG 0.581778 3_3:-71715092 None:intergenic
AAGCTTTGCCACCGAAGGAA+GGG 0.581985 3_3:-71715145 None:intergenic
AAGAGGGGCAAACCGAAACC+GGG 0.584016 3_3:-71716795 None:intergenic
TATGATATGAAAACAAGGAA+AGG 0.587538 3_3:+71720562 Msa0469740:CDS
TATGAAAACAAGGAAAGGAC+TGG 0.592837 3_3:+71720567 Msa0469740:CDS
AACTGCACTCGAACGGCTGG+CGG 0.597817 3_3:-71720725 None:intergenic
GTGAGCTGCAACATCGTCGA+GGG 0.599799 3_3:-71715198 None:intergenic
CACTGCAATCAAGATGCACC+CGG 0.601545 3_3:+71716777 Msa0469740:CDS
TAGCGAAGCTTTGCCACCGA+AGG 0.602957 3_3:-71715150 None:intergenic
GCACCATCATATTCAGGTGA+AGG 0.603300 3_3:-71722217 None:intergenic
ATTCACCAACTGCACTCGAA+CGG 0.603811 3_3:-71720732 None:intergenic
TGACATGGACAGCATCAAGA+GGG 0.608265 3_3:-71716811 None:intergenic
AAATTGGGCATCCTTAGTCA+TGG 0.619881 3_3:-71716578 None:intergenic
GCCCAATTTGCGTTACGTAG+AGG 0.621180 3_3:+71716592 Msa0469740:CDS
AACATGTTATCAATGCTGAA+AGG 0.623395 3_3:+71716846 Msa0469740:CDS
TAGTTAGGGTTTAATAACCA+TGG 0.624202 3_3:+71715055 Msa0469740:exon
AGGATAAGTCTCCTCCGCCA+TGG 0.624657 3_3:-71715072 None:intergenic
AGGACCATACAACAGCAGAT+GGG 0.625782 3_3:-71715367 None:intergenic
TACTTGTGTCGACGATGTCG+CGG 0.626145 3_3:-71715220 None:intergenic
GTTTCAGTCTCTCAGTGACA+TGG 0.627168 3_3:-71716826 None:intergenic
CCGTTGTACATCGTAGAAGG+AGG 0.629509 3_3:+71722300 Msa0469740:three_prime_UTR
TAACCTTCACCTGAATATGA+TGG 0.629737 3_3:+71722214 Msa0469740:exon
GGACCATACAACAGCAGATG+GGG 0.630103 3_3:-71715366 None:intergenic
GATGTACAACGGAAATATCT+CGG 0.630765 3_3:-71722289 None:intergenic
GACATCGACTTCACAGACAA+GGG 0.631926 3_3:+71715098 Msa0469740:CDS
GGACATCGACTTCACAGACA+AGG 0.636430 3_3:+71715097 Msa0469740:CDS
GTGACATGGACAGCATCAAG+AGG 0.637050 3_3:-71716812 None:intergenic
AGAAATATACAAAGAGCACT+AGG 0.637557 3_3:+71716714 Msa0469740:CDS
AGGCTTGATGTTCAAGACAG+TGG 0.638532 3_3:+71719177 Msa0469740:intron
GAATATATGATATGAAAACA+AGG 0.653141 3_3:+71720557 Msa0469740:CDS
AACATCGACGATTCTCGCGG+TGG 0.654620 3_3:+71715404 Msa0469740:CDS
CGTAGAAGGAGGCATCAGGA+TGG 0.659068 3_3:+71722311 Msa0469740:three_prime_UTR
GGTGAGCTGCAACATCGTCG+AGG 0.664996 3_3:-71715199 None:intergenic
CCTCCTTCTACGATGTACAA+CGG 0.678119 3_3:-71722300 None:intergenic
GACATGGACAGCATCAAGAG+GGG 0.683891 3_3:-71716810 None:intergenic
ACCGAAGGAAGGGTTACCGG+CGG 0.687119 3_3:-71715135 None:intergenic
TAAAACATCGACGATTCTCG+CGG 0.694200 3_3:+71715401 Msa0469740:CDS
TTCTTCAGTAATCTGCTGAG+AGG 0.704249 3_3:-71720358 None:intergenic
AAATTGAACCGAGAGAAATG+GGG 0.746077 3_3:+71722437 Msa0469740:three_prime_UTR
TTAGGGTTTAATAACCATGG+CGG 0.752952 3_3:+71715058 Msa0469740:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr3_3:71717241-71717260 None:intergenic 0.0%
!! ATAAAAATATTTATTCTATC+TGG + chr3_3:71718715-71718734 Msa0469740:intron 10.0%
!! AAAAAAAAAAAAAAAACTCA+AGG - chr3_3:71720114-71720133 None:intergenic 10.0%
!!! ATTGTTATTATTATTTTAGT+TGG + chr3_3:71720144-71720163 Msa0469740:intron 10.0%
!! ATATATTATAACTATTTGTA+AGG + chr3_3:71720865-71720884 Msa0469740:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+CGG - chr3_3:71721400-71721419 None:intergenic 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:71721400-71721419 None:intergenic 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG - chr3_3:71721404-71721423 None:intergenic 100.0%
!!! AAAAGTTTTTACAAAGTAAA+CGG - chr3_3:71715833-71715852 None:intergenic 15.0%
!! AAAAGCCTATTAATTTAATT+AGG + chr3_3:71717144-71717163 Msa0469740:intron 15.0%
!! TATATTTGTGTTAACTATTA+AGG + chr3_3:71717369-71717388 Msa0469740:intron 15.0%
!! ACAATTGTAAAATTTATAGA+TGG - chr3_3:71717492-71717511 None:intergenic 15.0%
!!! ATGTGTAATATTTTATAAGT+TGG + chr3_3:71718232-71718251 Msa0469740:intron 15.0%
!!! TTTTGTTATTTATTAAAGTG+TGG + chr3_3:71718297-71718316 Msa0469740:intron 15.0%
!!! TTTGTTATTTATTAAAGTGT+GGG + chr3_3:71718298-71718317 Msa0469740:intron 15.0%
!! TATAATATTAGTATAACTTG+TGG - chr3_3:71718659-71718678 None:intergenic 15.0%
!! ATAAGTATGATTTAATGATT+TGG - chr3_3:71718782-71718801 None:intergenic 15.0%
!! TTTGTAAATAAGAAAACTTA+AGG - chr3_3:71719277-71719296 None:intergenic 15.0%
!! TATATGAAGATATTAAGAAA+AGG - chr3_3:71719315-71719334 None:intergenic 15.0%
!! TTCTTAATATCTTCATATAA+AGG + chr3_3:71719316-71719335 Msa0469740:intron 15.0%
!! TAAATTATATATCCTGAATT+CGG + chr3_3:71719997-71720016 Msa0469740:intron 15.0%
!! TTAATGCAAGAATTATAAAA+TGG - chr3_3:71720527-71720546 None:intergenic 15.0%
!! TTTCAGTAAGAAAATAGAAA+TGG - chr3_3:71714982-71715001 None:intergenic 20.0%
!!! TCAGTATCATAATATGATTT+TGG + chr3_3:71715446-71715465 Msa0469740:CDS 20.0%
!! AATTTCATTAAAGTTGAACA+AGG - chr3_3:71715807-71715826 None:intergenic 20.0%
!!! AAAGTTTTTACAAAGTAAAC+GGG - chr3_3:71715832-71715851 None:intergenic 20.0%
!! AGAAGATAAAATGTTAGTTA+GGG + chr3_3:71715939-71715958 Msa0469740:intron 20.0%
!!! GTAAAACTAACACAAATTTT+AGG + chr3_3:71716068-71716087 Msa0469740:intron 20.0%
!!! AAATGTTTTCACAAAGTAAA+CGG + chr3_3:71716104-71716123 Msa0469740:intron 20.0%
!! ATAAAAGTGAAACAAGAATT+TGG + chr3_3:71716433-71716452 Msa0469740:intron 20.0%
!! TAAAAGTGAAACAAGAATTT+GGG + chr3_3:71716434-71716453 Msa0469740:intron 20.0%
!! GTCATACAAAATAATAATTG+TGG - chr3_3:71717328-71717347 None:intergenic 20.0%
!! ACAATAAATATCAAAGACTT+AGG - chr3_3:71717925-71717944 None:intergenic 20.0%
!!! TACTTTAGATGCTTTTTATT+TGG + chr3_3:71717996-71718015 Msa0469740:intron 20.0%
!! TAAATACTATGATGTGTAAT+AGG + chr3_3:71718020-71718039 Msa0469740:intron 20.0%
!! TTACACATCATAGTAAAAAA+GGG - chr3_3:71718220-71718239 None:intergenic 20.0%
!! ATTACACATCATAGTAAAAA+AGG - chr3_3:71718221-71718240 None:intergenic 20.0%
!! TCGATAATAATATGCTATAA+TGG - chr3_3:71718419-71718438 None:intergenic 20.0%
!!! ATTTTTATAAACTTTTGAGC+AGG - chr3_3:71718703-71718722 None:intergenic 20.0%
!!! TTCTAGTTATTAAGTTACTA+AGG + chr3_3:71718854-71718873 Msa0469740:intron 20.0%
!!! AAACATTGTTATTCCATTTT+GGG + chr3_3:71719107-71719126 Msa0469740:intron 20.0%
!! AAAAGAAACACAAATTTACA+AGG - chr3_3:71720044-71720063 None:intergenic 20.0%
!!! AAAGCAAAAAAATGTCATTT+AGG - chr3_3:71720313-71720332 None:intergenic 20.0%
!! ATATCAAATCCATCTATAAA+GGG - chr3_3:71720498-71720517 None:intergenic 20.0%
!! AATATCAAATCCATCTATAA+AGG - chr3_3:71720499-71720518 None:intergenic 20.0%
!! GAATATATGATATGAAAACA+AGG + chr3_3:71720557-71720576 Msa0469740:CDS 20.0%
!! GATCAATAAAATAAATTACC+AGG - chr3_3:71720657-71720676 None:intergenic 20.0%
!! TAACCTAAAAGCTTATTTAA+AGG - chr3_3:71721135-71721154 None:intergenic 20.0%
!!! ATGAATTTTACTCATAAACA+TGG + chr3_3:71722012-71722031 Msa0469740:intron 20.0%
!! TTTTTGTGTGTTTAGTTGAT+AGG + chr3_3:71715322-71715341 Msa0469740:intron 25.0%
! ACATGCAAATTTACTACATA+AGG - chr3_3:71715652-71715671 None:intergenic 25.0%
! AAATTTGCATGTCAAATTTG+AGG + chr3_3:71715660-71715679 Msa0469740:intron 25.0%
!!! TTTGACTTGATTTGTTGTTA+TGG + chr3_3:71715686-71715705 Msa0469740:intron 25.0%
!! ATTTAACTTTGTGTCGAATA+AGG + chr3_3:71715745-71715764 Msa0469740:intron 25.0%
! GAGAAGATAAAATGTTAGTT+AGG + chr3_3:71715938-71715957 Msa0469740:intron 25.0%
!! AATACTGAAAACAGTTCTTT+TGG + chr3_3:71715978-71715997 Msa0469740:intron 25.0%
!! AATGTTTTCACAAAGTAAAC+GGG + chr3_3:71716105-71716124 Msa0469740:intron 25.0%
! TAAACATTAAAGACGATACA+AGG + chr3_3:71716281-71716300 Msa0469740:intron 25.0%
!! TTTGATAGTTAGAAAAGTTG+AGG - chr3_3:71716496-71716515 None:intergenic 25.0%
!!! AAGAATATGAAGAGTGTTAT+AGG - chr3_3:71716679-71716698 None:intergenic 25.0%
! TAAGTAAGTAATAACAGACA+GGG - chr3_3:71716879-71716898 None:intergenic 25.0%
! ATAAGTAAGTAATAACAGAC+AGG - chr3_3:71716880-71716899 None:intergenic 25.0%
! CTAATAACTATATTGACCTT+AGG - chr3_3:71717410-71717429 None:intergenic 25.0%
! TGAAATTTGTAACACAAACT+AGG + chr3_3:71717611-71717630 Msa0469740:intron 25.0%
!! TAATATGCACTTTCTTTTAG+TGG + chr3_3:71717944-71717963 Msa0469740:intron 25.0%
!!! AATATGCTATAATGGATTGA+AGG - chr3_3:71718411-71718430 None:intergenic 25.0%
! GTATATTCTCTTCATTATTC+AGG + chr3_3:71718610-71718629 Msa0469740:intron 25.0%
! TTATTCAGGAAGTTTAATTG+TGG + chr3_3:71718624-71718643 Msa0469740:intron 25.0%
! AATCAGACTAATCAACTAAA+AGG - chr3_3:71718806-71718825 None:intergenic 25.0%
!!! AGATTTTCTAAAATGTTGTG+AGG + chr3_3:71718885-71718904 Msa0469740:intron 25.0%
!! TACTGTCTTTTAATGTCAAA+TGG + chr3_3:71718968-71718987 Msa0469740:intron 25.0%
! GAAGCATAATATTGGAAATA+TGG + chr3_3:71718990-71719009 Msa0469740:intron 25.0%
! AATATTGGAAATATGGAAGA+TGG + chr3_3:71718997-71719016 Msa0469740:intron 25.0%
! TTCGACTGTTATAAAAAAAG+TGG - chr3_3:71719089-71719108 None:intergenic 25.0%
!!! GAAACATTGTTATTCCATTT+TGG + chr3_3:71719106-71719125 Msa0469740:intron 25.0%
!!! TAACGATTTTGAGTTTTACT+AGG + chr3_3:71719157-71719176 Msa0469740:intron 25.0%
! AATACAACTAGTCCTTTAAA+TGG - chr3_3:71719511-71719530 None:intergenic 25.0%
! AATACAACTAGTCCTTTAAA+TGG - chr3_3:71719511-71719530 None:intergenic 25.0%
! CTTGACTGAAACAAAAATTA+CGG + chr3_3:71719808-71719827 Msa0469740:intron 25.0%
!! CTTGAATAACTTTTGTACTA+TGG + chr3_3:71719927-71719946 Msa0469740:intron 25.0%
! TCTATAAGCATTTATCGTTT+AGG - chr3_3:71720080-71720099 None:intergenic 25.0%
! ATACAAAGACACAATAATTC+AGG - chr3_3:71720282-71720301 None:intergenic 25.0%
!! TACTTTTATCCCTTTATAGA+TGG + chr3_3:71720486-71720505 Msa0469740:intron 25.0%
! TTCTTGCATTAATTTCAAAC+AGG + chr3_3:71720535-71720554 Msa0469740:intron 25.0%
! TATGATATGAAAACAAGGAA+AGG + chr3_3:71720562-71720581 Msa0469740:CDS 25.0%
! AAAATAAATTACCAGGTAGT+TGG - chr3_3:71720650-71720669 None:intergenic 25.0%
! AGAATAGCACATAAAAAAGT+AGG - chr3_3:71720788-71720807 None:intergenic 25.0%
! AAAAAAACTTGAGCTTATGT+GGG + chr3_3:71721261-71721280 Msa0469740:intron 25.0%
! GAAAGAACAGAACAATAATT+TGG + chr3_3:71721334-71721353 Msa0469740:intron 25.0%
! TATCTTAAATTTGCAGAAAG+TGG + chr3_3:71721513-71721532 Msa0469740:intron 25.0%
! ATCTTAAATTTGCAGAAAGT+GGG + chr3_3:71721514-71721533 Msa0469740:intron 25.0%
! TATCTTAAATTTGCAGAAAG+TGG + chr3_3:71721513-71721532 Msa0469740:intron 25.0%
! ATCTTAAATTTGCAGAAAGT+GGG + chr3_3:71721514-71721533 Msa0469740:intron 25.0%
! TAGTAATTTATGAAAATGCC+CGG + chr3_3:71721813-71721832 Msa0469740:intron 25.0%
! ATATGTGTGCTTATCATAAT+TGG + chr3_3:71722073-71722092 Msa0469740:intron 25.0%
! GAATAAAATTTCATTGTTGC+AGG + chr3_3:71722095-71722114 Msa0469740:intron 25.0%
!!! TGTTTCGTTTGTTTAACTTT+TGG + chr3_3:71722394-71722413 Msa0469740:three_prime_UTR 25.0%
!! AACTAGTAGAGCTTTTTCTA+TGG - chr3_3:71715040-71715059 None:intergenic 30.0%
TAGAAAAAGCTCTACTAGTT+AGG + chr3_3:71715040-71715059 Msa0469740:five_prime_UTR 30.0%
AGAAAAAGCTCTACTAGTTA+GGG + chr3_3:71715041-71715060 Msa0469740:five_prime_UTR 30.0%
TAGTTAGGGTTTAATAACCA+TGG + chr3_3:71715055-71715074 Msa0469740:exon 30.0%
ATAAACCCTAGAAATGAAAG+GGG - chr3_3:71715268-71715287 None:intergenic 30.0%
GATAAACCCTAGAAATGAAA+GGG - chr3_3:71715269-71715288 None:intergenic 30.0%
TGATAAACCCTAGAAATGAA+AGG - chr3_3:71715270-71715289 None:intergenic 30.0%
! TCTAGGGTTTATCATTTCTT+CGG + chr3_3:71715276-71715295 Msa0469740:intron 30.0%
! TTTTGTGACTGCATAATAGA+TGG + chr3_3:71715604-71715623 Msa0469740:intron 30.0%
! TTTGAAATGAACCATTGTGA+TGG + chr3_3:71715914-71715933 Msa0469740:intron 30.0%
TTGAAATGAACCATTGTGAT+GGG + chr3_3:71715915-71715934 Msa0469740:intron 30.0%
! AGTTCTTTTGGCATTTTCAT+TGG + chr3_3:71715990-71716009 Msa0469740:intron 30.0%
! ATGAACAAGTGTGCATATTT+TGG - chr3_3:71716018-71716037 None:intergenic 30.0%
!!! GTTAGTTTTACTTGCTAACA+AGG - chr3_3:71716059-71716078 None:intergenic 30.0%
! ATGTTTTCACAAAGTAAACG+GGG + chr3_3:71716106-71716125 Msa0469740:intron 30.0%
TCTATCTTCTTTCTGAATAC+CGG + chr3_3:71716201-71716220 Msa0469740:intron 30.0%
TTTCTGAATACCGGATAATT+CGG + chr3_3:71716210-71716229 Msa0469740:intron 30.0%
ATAAAAATGCCCGAATTATC+CGG - chr3_3:71716223-71716242 None:intergenic 30.0%
!! AGTGTTGATATCAGCTTAAA+GGG - chr3_3:71716261-71716280 None:intergenic 30.0%
!! AAGTGTTGATATCAGCTTAA+AGG - chr3_3:71716262-71716281 None:intergenic 30.0%
ATCATGTCTGAAAATTGACA+TGG - chr3_3:71716329-71716348 None:intergenic 30.0%
! ATGTCAATTTTCAGACATGA+TGG + chr3_3:71716328-71716347 Msa0469740:intron 30.0%
!! AGAAATATACAAAGAGCACT+AGG + chr3_3:71716714-71716733 Msa0469740:CDS 30.0%
AACATGTTATCAATGCTGAA+AGG + chr3_3:71716846-71716865 Msa0469740:CDS 30.0%
GCCTAACTCGTTTAATAAAT+GGG + chr3_3:71717103-71717122 Msa0469740:intron 30.0%
ACCCATTTATTAAACGAGTT+AGG - chr3_3:71717107-71717126 None:intergenic 30.0%
CCTGGCCTAATTAAATTAAT+AGG - chr3_3:71717152-71717171 None:intergenic 30.0%
CCTATTAATTTAATTAGGCC+AGG + chr3_3:71717149-71717168 Msa0469740:intron 30.0%
ATTGTGGTATGAGAATTTGA+AGG - chr3_3:71717312-71717331 None:intergenic 30.0%
!!! CAAAGGCTTTATTTTAAGTC+TGG - chr3_3:71717684-71717703 None:intergenic 30.0%
CTTAAAATAAAGCCTTTGAC+AGG + chr3_3:71717686-71717705 Msa0469740:intron 30.0%
ATACTATGATGTGTAATAGG+AGG + chr3_3:71718023-71718042 Msa0469740:intron 30.0%
TACTATGATGTGTAATAGGA+GGG + chr3_3:71718024-71718043 Msa0469740:intron 30.0%
!!! GTGGGTATTTTTTATTAACG+CGG + chr3_3:71718316-71718335 Msa0469740:intron 30.0%
!!! TGGGTATTTTTTATTAACGC+GGG + chr3_3:71718317-71718336 Msa0469740:intron 30.0%
!!! ATTTTTTATTAACGCGGGTA+TGG + chr3_3:71718322-71718341 Msa0469740:intron 30.0%
!!! TTTTTTATTAACGCGGGTAT+GGG + chr3_3:71718323-71718342 Msa0469740:intron 30.0%
!! TATAATGGATTGAAGGCAAA+GGG - chr3_3:71718404-71718423 None:intergenic 30.0%
TATTATCGAGTGTCCTTAAA+TGG + chr3_3:71718430-71718449 Msa0469740:intron 30.0%
AGTAAAACTGCAACCATTTA+AGG - chr3_3:71718446-71718465 None:intergenic 30.0%
! GTCAAATGGAAGCATAATAT+TGG + chr3_3:71718982-71719001 Msa0469740:intron 30.0%
!!! TTGTTATTCCATTTTGGGAT+TGG + chr3_3:71719112-71719131 Msa0469740:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG + chr3_3:71719356-71719375 Msa0469740:intron 30.0%
! TCTTGTCTGAAACAAAAATC+AGG + chr3_3:71719447-71719466 Msa0469740:intron 30.0%
! CTTGTCTGAAACAAAAATCA+GGG + chr3_3:71719448-71719467 Msa0469740:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG + chr3_3:71719356-71719375 Msa0469740:intron 30.0%
! TCTTGTCTGAAACAAAAATC+AGG + chr3_3:71719447-71719466 Msa0469740:intron 30.0%
! CTTGTCTGAAACAAAAATCA+GGG + chr3_3:71719448-71719467 Msa0469740:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG + chr3_3:71719356-71719375 Msa0469740:intron 30.0%
! GGAGAATCAAACTATTTTGT+GGG + chr3_3:71719357-71719376 Msa0469740:intron 30.0%
ATACTAAAACTGAGTAGTAC+TGG - chr3_3:71719751-71719770 None:intergenic 30.0%
! AAGTTTGATTGTTTCTTGCA+TGG + chr3_3:71720194-71720213 Msa0469740:intron 30.0%
TTCAGAACAGCTCTTAAATA+TGG + chr3_3:71720234-71720253 Msa0469740:intron 30.0%
! TATTTTGCAGTCAACTCATA+TGG + chr3_3:71720335-71720354 Msa0469740:intron 30.0%
ATTTCCAGTGCAAAGATAAA+CGG - chr3_3:71720385-71720404 None:intergenic 30.0%
GATATTTGCTCAATGTCTTT+GGG - chr3_3:71720414-71720433 None:intergenic 30.0%
AGATATTTGCTCAATGTCTT+TGG - chr3_3:71720415-71720434 None:intergenic 30.0%
ACATTGAGCAAATATCTTAC+TGG + chr3_3:71720418-71720437 Msa0469740:CDS 30.0%
TTGATGAAAGACATGTTTGT+CGG - chr3_3:71720824-71720843 None:intergenic 30.0%
CTTGTTAATTGAGCGAATTA+GGG - chr3_3:71720994-71721013 None:intergenic 30.0%
TCTTGTTAATTGAGCGAATT+AGG - chr3_3:71720995-71721014 None:intergenic 30.0%
TTAGGCTATGAAAGGAAAAT+AGG + chr3_3:71721083-71721102 Msa0469740:intron 30.0%
! AGGCCTTTAAATAAGCTTTT+AGG + chr3_3:71721129-71721148 Msa0469740:intron 30.0%
AGGACATAAATACCTATCTT+AGG + chr3_3:71721209-71721228 Msa0469740:intron 30.0%
ACCTATCTTAGGTAACAAAT+CGG + chr3_3:71721220-71721239 Msa0469740:intron 30.0%
!!! TCAAGTTTTTTTGCAAGTGT+TGG - chr3_3:71721253-71721272 None:intergenic 30.0%
CAAAAAAACTTGAGCTTATG+TGG + chr3_3:71721260-71721279 Msa0469740:intron 30.0%
ATGATTGTGGTTGTTCAAAA+AGG - chr3_3:71721314-71721333 None:intergenic 30.0%
TGATATCCAGTTGCATAAAA+CGG - chr3_3:71721424-71721443 None:intergenic 30.0%
TGGATATCAGATTCTTAAAC+CGG + chr3_3:71721435-71721454 Msa0469740:intron 30.0%
TGGATATCAGATTCTTAAAC+CGG + chr3_3:71721435-71721454 Msa0469740:intron 30.0%
TAGATACTAGATATGTAGCA+TGG + chr3_3:71721785-71721804 Msa0469740:intron 30.0%
TCATAAACATGGATCAATGA+TGG + chr3_3:71722023-71722042 Msa0469740:intron 30.0%
! AACGATTTTACACCAGTATT+AGG - chr3_3:71722346-71722365 None:intergenic 30.0%
AATACTGGTGTAAAATCGTT+TGG + chr3_3:71722346-71722365 Msa0469740:three_prime_UTR 30.0%
TAAAATTGAACCGAGAGAAA+TGG + chr3_3:71722435-71722454 Msa0469740:three_prime_UTR 30.0%
AAAATTGAACCGAGAGAAAT+GGG + chr3_3:71722436-71722455 Msa0469740:three_prime_UTR 30.0%
TTAGGGTTTAATAACCATGG+CGG + chr3_3:71715058-71715077 Msa0469740:exon 35.0%
TAACTTCCCCTTTCATTTCT+AGG + chr3_3:71715259-71715278 Msa0469740:intron 35.0%
AACTTCCCCTTTCATTTCTA+GGG + chr3_3:71715260-71715279 Msa0469740:intron 35.0%
! TTCCTAACTTCCTTTTGTGT+GGG + chr3_3:71715565-71715584 Msa0469740:intron 35.0%
! ACAAGGAAAGCATGGATAAA+TGG - chr3_3:71715790-71715809 None:intergenic 35.0%
AAAGTTGAACAAGGAAAGCA+TGG - chr3_3:71715798-71715817 None:intergenic 35.0%
TGAAATGAACCATTGTGATG+GGG + chr3_3:71715916-71715935 Msa0469740:intron 35.0%
TTCTGAATACCGGATAATTC+GGG + chr3_3:71716211-71716230 Msa0469740:intron 35.0%
! GTGTTGATATCAGCTTAAAG+GGG - chr3_3:71716260-71716279 None:intergenic 35.0%
TGAAAATTGACATGGACATG+AGG - chr3_3:71716321-71716340 None:intergenic 35.0%
! AACAAGACCAGTTTTACAGA+GGG - chr3_3:71716544-71716563 None:intergenic 35.0%
! TAACAAGACCAGTTTTACAG+AGG - chr3_3:71716545-71716564 None:intergenic 35.0%
AGTGTTATAGGTCAAGAAAC+TGG - chr3_3:71716667-71716686 None:intergenic 35.0%
AAACCCAATCCCAAAAATAC+GGG - chr3_3:71716999-71717018 None:intergenic 35.0%
CAAACCCAATCCCAAAAATA+CGG - chr3_3:71717000-71717019 None:intergenic 35.0%
!!! GTATTTTTGGGATTGGGTTT+GGG + chr3_3:71716999-71717018 Msa0469740:intron 35.0%
GGCCTAACTCGTTTAATAAA+TGG + chr3_3:71717102-71717121 Msa0469740:intron 35.0%
AATTTAATTAGGCCAGGCTT+AGG + chr3_3:71717155-71717174 Msa0469740:intron 35.0%
!!! CTTTTTTATAAGCCTAAGCC+TGG - chr3_3:71717170-71717189 None:intergenic 35.0%
TAATATACTCGTATACCGAC+CGG - chr3_3:71717211-71717230 None:intergenic 35.0%
AGTACGTTGCACAAATTGAA+AGG + chr3_3:71717560-71717579 Msa0469740:intron 35.0%
! CACAAACTAGGCTTTTAAAC+AGG + chr3_3:71717623-71717642 Msa0469740:intron 35.0%
! AGGCTTTTAAACAGGCTAAT+AGG + chr3_3:71717631-71717650 Msa0469740:intron 35.0%
!! GCCAGACCAAACTTTTAAAA+AGG + chr3_3:71717653-71717672 Msa0469740:intron 35.0%
!! GCCTTTTTAAAAGTTTGGTC+TGG - chr3_3:71717657-71717676 None:intergenic 35.0%
!! ACCAAACTTTTAAAAAGGCC+AGG + chr3_3:71717658-71717677 Msa0469740:intron 35.0%
TAAAGCCTTTGACAGGTAAA+AGG + chr3_3:71717693-71717712 Msa0469740:intron 35.0%
AAAAACTAAGGCCTAAGTCT+TGG - chr3_3:71717719-71717738 None:intergenic 35.0%
!!! AGGCCTTAGTTTTTTCAACT+AGG + chr3_3:71717725-71717744 Msa0469740:intron 35.0%
AGGCCTAGTTGAAAAAACTA+AGG - chr3_3:71717731-71717750 None:intergenic 35.0%
TAGCCTATTTAAGCAAAGCT+CGG + chr3_3:71717750-71717769 Msa0469740:intron 35.0%
AGTGTAGTCTATATAGTGTG+CGG - chr3_3:71717865-71717884 None:intergenic 35.0%
ACTATGATGTGTAATAGGAG+GGG + chr3_3:71718025-71718044 Msa0469740:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr3_3:71718121-71718140 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr3_3:71718120-71718139 Msa0469740:intron 35.0%
! TTTTTATTAACGCGGGTATG+GGG + chr3_3:71718324-71718343 Msa0469740:intron 35.0%
!! CTATAATGGATTGAAGGCAA+AGG - chr3_3:71718405-71718424 None:intergenic 35.0%
GATGCAAACTTCTCGTATTA+TGG - chr3_3:71718536-71718555 None:intergenic 35.0%
! AAGTTTAATTGTGGCTTGCA+TGG + chr3_3:71718633-71718652 Msa0469740:intron 35.0%
CTAAAATGTTGTGAGGATTG+AGG + chr3_3:71718892-71718911 Msa0469740:intron 35.0%
TGTACCACACTATCACTTAA+TGG - chr3_3:71718920-71718939 None:intergenic 35.0%
AAGACAGTATGTGATTCACA+TGG - chr3_3:71718957-71718976 None:intergenic 35.0%
CAAGAAGTGAGACATTTCAA+AGG - chr3_3:71719043-71719062 None:intergenic 35.0%
!! CTTTGAAATGTCTCACTTCT+TGG + chr3_3:71719041-71719060 Msa0469740:intron 35.0%
TAGCAATGGTGATATGAGAA+AGG + chr3_3:71719221-71719240 Msa0469740:CDS 35.0%
!! AAAGGCACTGAATATTCTTC+AGG + chr3_3:71719239-71719258 Msa0469740:CDS 35.0%
! AGGAGTAGTTGTATTTGTTG+TGG + chr3_3:71719336-71719355 Msa0469740:intron 35.0%
TCGAGACAACATCCATTTAA+AGG + chr3_3:71719496-71719515 Msa0469740:intron 35.0%
!! AGGACTAGTTGTATTTGTTG+TGG + chr3_3:71719516-71719535 Msa0469740:intron 35.0%
TCGAGACAACATCCATTTAA+AGG + chr3_3:71719496-71719515 Msa0469740:intron 35.0%
!! AGGACTAGTTGTATTTGTTG+TGG + chr3_3:71719516-71719535 Msa0469740:intron 35.0%
TTACGGTAGCTAGATATACA+TGG + chr3_3:71719825-71719844 Msa0469740:intron 35.0%
TATATCCTGAATTCGGTACA+TGG + chr3_3:71720004-71720023 Msa0469740:intron 35.0%
AGAAAAATTGCGCTCAGATT+TGG - chr3_3:71720172-71720191 None:intergenic 35.0%
TATGAAAACAAGGAAAGGAC+TGG + chr3_3:71720567-71720586 Msa0469740:CDS 35.0%
!! TTACACTTTGTTGTTGTCAC+AGG + chr3_3:71720681-71720700 Msa0469740:intron 35.0%
TGATGAAAGACATGTTTGTC+GGG - chr3_3:71720823-71720842 None:intergenic 35.0%
AGAAAGTGGTATCTTATTGC+TGG + chr3_3:71720893-71720912 Msa0469740:intron 35.0%
GAAAGTGGTATCTTATTGCT+GGG + chr3_3:71720894-71720913 Msa0469740:intron 35.0%
ACAAGATAGATTGCACTCTA+AGG + chr3_3:71721009-71721028 Msa0469740:intron 35.0%
TAGCCTAATAAGAGTCAGTT+GGG - chr3_3:71721071-71721090 None:intergenic 35.0%
ATAGCCTAATAAGAGTCAGT+TGG - chr3_3:71721072-71721091 None:intergenic 35.0%
GACTCTTATTAGGCTATGAA+AGG + chr3_3:71721075-71721094 Msa0469740:intron 35.0%
TAAAGGCCTTACATATGTAC+AGG - chr3_3:71721118-71721137 None:intergenic 35.0%
AAGTCAATCTGTTACTGCTT+TGG + chr3_3:71721154-71721173 Msa0469740:intron 35.0%
ATTTATGTCCTTTCCAGTTG+AGG - chr3_3:71721200-71721219 None:intergenic 35.0%
CCTATCTTAGGTAACAAATC+GGG + chr3_3:71721221-71721240 Msa0469740:intron 35.0%
TATGTGGGCGATGTTTAAAT+TGG + chr3_3:71721276-71721295 Msa0469740:intron 35.0%
TGGTTGTTCAAAAAGGAATC+AGG - chr3_3:71721307-71721326 None:intergenic 35.0%
GTTCTGTTCTTTCATGATTG+TGG - chr3_3:71721327-71721346 None:intergenic 35.0%
ATATCCAGTTGCATAAAACG+GGG - chr3_3:71721422-71721441 None:intergenic 35.0%
GATATCCAGTTGCATAAAAC+GGG - chr3_3:71721423-71721442 None:intergenic 35.0%
TAGTTGTACTGCATGCAATA+TGG + chr3_3:71721666-71721685 Msa0469740:intron 35.0%
CTAAGAACCAGAAAGAAAAC+AGG - chr3_3:71722049-71722068 None:intergenic 35.0%
! TGCAGGTACAGATTAAGTTT+TGG + chr3_3:71722112-71722131 Msa0469740:intron 35.0%
! GCAGGTACAGATTAAGTTTT+GGG + chr3_3:71722113-71722132 Msa0469740:intron 35.0%
TAACCTTCACCTGAATATGA+TGG + chr3_3:71722214-71722233 Msa0469740:exon 35.0%
! TATCTCGGTGCACATAAATT+AGG - chr3_3:71722277-71722296 None:intergenic 35.0%
GATGTACAACGGAAATATCT+CGG - chr3_3:71722292-71722311 None:intergenic 35.0%
AAATTGAACCGAGAGAAATG+GGG + chr3_3:71722437-71722456 Msa0469740:three_prime_UTR 35.0%
ATGAAAGGGGAAGTTAGAGA+GGG - chr3_3:71715255-71715274 None:intergenic 40.0%
AATGAAAGGGGAAGTTAGAG+AGG - chr3_3:71715256-71715275 None:intergenic 40.0%
TAAAACATCGACGATTCTCG+CGG + chr3_3:71715401-71715420 Msa0469740:CDS 40.0%
CTGAATGCTTCAGATGATAG+AGG + chr3_3:71715471-71715490 Msa0469740:CDS 40.0%
AGCACTCAGAGTCTATCATT+TGG + chr3_3:71715531-71715550 Msa0469740:CDS 40.0%
GCACTCAGAGTCTATCATTT+GGG + chr3_3:71715532-71715551 Msa0469740:CDS 40.0%
! CTTCCTAACTTCCTTTTGTG+TGG + chr3_3:71715564-71715583 Msa0469740:intron 40.0%
CAGTAAAACACCCACACAAA+AGG - chr3_3:71715578-71715597 None:intergenic 40.0%
TCGAAGCACATTTCACAGTA+TGG - chr3_3:71715726-71715745 None:intergenic 40.0%
TTATCTTCTCCCCATCACAA+TGG - chr3_3:71715928-71715947 None:intergenic 40.0%
TATCATTCCATCAGCCAATG+CGG + chr3_3:71716168-71716187 Msa0469740:intron 40.0%
TAGATATAGAACCTCCGCAT+TGG - chr3_3:71716185-71716204 None:intergenic 40.0%
AAAGCACATGCAAGCAGAAA+GGG - chr3_3:71716395-71716414 None:intergenic 40.0%
! AAAAGCACATGCAAGCAGAA+AGG - chr3_3:71716396-71716415 None:intergenic 40.0%
! TGCTTGCATGTGCTTTTGAT+TGG + chr3_3:71716399-71716418 Msa0469740:intron 40.0%
!! GCTTGCATGTGCTTTTGATT+GGG + chr3_3:71716400-71716419 Msa0469740:intron 40.0%
AAATTGGGCATCCTTAGTCA+TGG - chr3_3:71716581-71716600 None:intergenic 40.0%
ACCTCTACGTAACGCAAATT+GGG - chr3_3:71716596-71716615 None:intergenic 40.0%
TTGAGCTACATTCTCACGAT+GGG + chr3_3:71716963-71716982 Msa0469740:intron 40.0%
! GGGTAAACACCCGTATTTTT+GGG + chr3_3:71716987-71717006 Msa0469740:intron 40.0%
!!! AACACCCGTATTTTTGGGAT+TGG + chr3_3:71716992-71717011 Msa0469740:intron 40.0%
!!! ACACCCGTATTTTTGGGATT+GGG + chr3_3:71716993-71717012 Msa0469740:intron 40.0%
!!! CGTATTTTTGGGATTGGGTT+TGG + chr3_3:71716998-71717017 Msa0469740:intron 40.0%
TTGGGTAATTACCCGCAAAT+AGG + chr3_3:71717017-71717036 Msa0469740:intron 40.0%
TGGGTAATTACCCGCAAATA+GGG + chr3_3:71717018-71717037 Msa0469740:intron 40.0%
! GCTTGCTACTAATATGCCTA+AGG + chr3_3:71717391-71717410 Msa0469740:intron 40.0%
!! GCCTGGCCTTTTTAAAAGTT+TGG - chr3_3:71717662-71717681 None:intergenic 40.0%
!!! GCTTTATTTTAAGTCTGGCC+TGG - chr3_3:71717679-71717698 None:intergenic 40.0%
GAGCTTTGCTTAAATAGGCT+AGG - chr3_3:71717751-71717770 None:intergenic 40.0%
TATTTAAGCAAAGCTCGGCT+CGG + chr3_3:71717755-71717774 Msa0469740:intron 40.0%
CCATTCAAATTTGCGAGTAG+GGG - chr3_3:71717796-71717815 None:intergenic 40.0%
CCCATTCAAATTTGCGAGTA+GGG - chr3_3:71717797-71717816 None:intergenic 40.0%
CCCTACTCGCAAATTTGAAT+GGG + chr3_3:71717794-71717813 Msa0469740:intron 40.0%
ACCCATTCAAATTTGCGAGT+AGG - chr3_3:71717798-71717817 None:intergenic 40.0%
AAATTTGAATGGGTGTGGTG+CGG + chr3_3:71717804-71717823 Msa0469740:intron 40.0%
GTGTAGTCTATATAGTGTGC+GGG - chr3_3:71717864-71717883 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG + chr3_3:71718070-71718089 Msa0469740:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr3_3:71718114-71718133 Msa0469740:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr3_3:71718115-71718134 Msa0469740:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr3_3:71718146-71718165 Msa0469740:intron 40.0%
CATAGTAAAAAAGGGCAACC+CGG - chr3_3:71718212-71718231 None:intergenic 40.0%
! GGAACCATTAAGTGATAGTG+TGG + chr3_3:71718913-71718932 Msa0469740:intron 40.0%
GATGGTAATACATGCTGATC+TGG + chr3_3:71719015-71719034 Msa0469740:intron 40.0%
GCAAGTTACCAATCCCAAAA+TGG - chr3_3:71719123-71719142 None:intergenic 40.0%
!! CAGGGAAGCTTGTTATAACA+TGG + chr3_3:71719466-71719485 Msa0469740:intron 40.0%
!! CAGGGAAGCTTGTTATAACA+TGG + chr3_3:71719466-71719485 Msa0469740:intron 40.0%
!! ATTAGCACACTTGTTGACTC+AGG - chr3_3:71719857-71719876 None:intergenic 40.0%
TAAGACCATGTACCGAATTC+AGG - chr3_3:71720012-71720031 None:intergenic 40.0%
TTCTTCAGTAATCTGCTGAG+AGG - chr3_3:71720361-71720380 None:intergenic 40.0%
TTACCAGGTAGTTGGATGTT+AGG - chr3_3:71720642-71720661 None:intergenic 40.0%
!! AGTGCAGTTGGTGAATGATT+TGG + chr3_3:71720739-71720758 Msa0469740:CDS 40.0%
TTTGTAAGGCTGAGAGAAAG+TGG + chr3_3:71720879-71720898 Msa0469740:intron 40.0%
GTATCTTATTGCTGGGAACA+GGG + chr3_3:71720901-71720920 Msa0469740:intron 40.0%
! AATTAGGGCCTTTTGGCATT+GGG - chr3_3:71720979-71720998 None:intergenic 40.0%
AGTTGGGTAGTTAGAAAGCA+AGG - chr3_3:71721055-71721074 None:intergenic 40.0%
! CTACCCAACTGACTCTTATT+AGG + chr3_3:71721065-71721084 Msa0469740:intron 40.0%
!! CCCGATTTGTTACCTAAGAT+AGG - chr3_3:71721224-71721243 None:intergenic 40.0%
TTAGGTAACAAATCGGGCTA+TGG + chr3_3:71721227-71721246 Msa0469740:intron 40.0%
TATCCAGTTGCATAAAACGG+GGG - chr3_3:71721421-71721440 None:intergenic 40.0%
ACAGCTACGTATACATGTAC+CGG - chr3_3:71721457-71721476 None:intergenic 40.0%
ACAGCTACGTATACATGTAC+CGG - chr3_3:71721457-71721476 None:intergenic 40.0%
AGGTGTACAAATGGTCATTC+AGG - chr3_3:71721729-71721748 None:intergenic 40.0%
CACACAAGTAGGTGTACAAA+TGG - chr3_3:71721738-71721757 None:intergenic 40.0%
GAATGACAAAGCACACAAGT+AGG - chr3_3:71721749-71721768 None:intergenic 40.0%
AGGGGATATGTCTATATTCC+GGG - chr3_3:71721834-71721853 None:intergenic 40.0%
CAGGGGATATGTCTATATTC+CGG - chr3_3:71721835-71721854 None:intergenic 40.0%
GTCAGATGAAGCCAAATTTC+AGG - chr3_3:71721929-71721948 None:intergenic 40.0%
TCTAGCACATACATAACGAC+TGG - chr3_3:71721951-71721970 None:intergenic 40.0%
! ATGATGGCCTGTTTTCTTTC+TGG + chr3_3:71722039-71722058 Msa0469740:intron 40.0%
ATCAGTGCACCATCATATTC+AGG - chr3_3:71722226-71722245 None:intergenic 40.0%
TTTCCGTTGTACATCGTAGA+AGG + chr3_3:71722297-71722316 Msa0469740:three_prime_UTR 40.0%
!! AGGGAAGACTGTGTTTTGAG+CGG + chr3_3:71714921-71714940 Msa0469740:five_prime_UTR 45.0%
TCTGTGAAGTCGATGTCCAT+AGG - chr3_3:71715095-71715114 None:intergenic 45.0%
!! GACATCGACTTCACAGACAA+GGG + chr3_3:71715098-71715117 Msa0469740:CDS 45.0%
TTACCCCATCTGCTGTTGTA+TGG + chr3_3:71715363-71715382 Msa0469740:CDS 45.0%
AGGACCATACAACAGCAGAT+GGG - chr3_3:71715370-71715389 None:intergenic 45.0%
CACCCACACAAAAGGAAGTT+AGG - chr3_3:71715570-71715589 None:intergenic 45.0%
CGCTAATTACTGCTGAACTC+TGG - chr3_3:71716132-71716151 None:intergenic 45.0%
GAGTTCAGCAGTAATTAGCG+TGG + chr3_3:71716132-71716151 Msa0469740:intron 45.0%
CGTCAAACCCTCTGTAAAAC+TGG + chr3_3:71716534-71716553 Msa0469740:CDS 45.0%
TGAAGCAGATGCCATGACTA+AGG + chr3_3:71716567-71716586 Msa0469740:CDS 45.0%
CACCTCTACGTAACGCAAAT+TGG - chr3_3:71716597-71716616 None:intergenic 45.0%
TGCATCTTGATTGCAGTGCT+GGG - chr3_3:71716775-71716794 None:intergenic 45.0%
AATCAAGATGCACCCGGTTT+CGG + chr3_3:71716783-71716802 Msa0469740:CDS 45.0%
TGACATGGACAGCATCAAGA+GGG - chr3_3:71716814-71716833 None:intergenic 45.0%
GTTTCAGTCTCTCAGTGACA+TGG - chr3_3:71716829-71716848 None:intergenic 45.0%
GTTGAGCTACATTCTCACGA+TGG + chr3_3:71716962-71716981 Msa0469740:intron 45.0%
! CGGGTAAACACCCGTATTTT+TGG + chr3_3:71716986-71717005 Msa0469740:intron 45.0%
GGGTAATTACCCGCAAATAG+GGG + chr3_3:71717019-71717038 Msa0469740:intron 45.0%
TAATTACCCGCAAATAGGGG+TGG + chr3_3:71717022-71717041 Msa0469740:intron 45.0%
AATTACCCGCAAATAGGGGT+GGG + chr3_3:71717023-71717042 Msa0469740:intron 45.0%
AAAAGCCTATCAAGCCTACC+AGG + chr3_3:71717185-71717204 Msa0469740:intron 45.0%
!! CTTGGCCTTTTACCTGTCAA+AGG - chr3_3:71717701-71717720 None:intergenic 45.0%
CAGGTAAAAGGCCAAGACTT+AGG + chr3_3:71717705-71717724 Msa0469740:intron 45.0%
GAGCCGAGCTTTGCTTAAAT+AGG - chr3_3:71717756-71717775 None:intergenic 45.0%
TCAAATTTGCGAGTAGGGGT+GGG - chr3_3:71717792-71717811 None:intergenic 45.0%
TTCAAATTTGCGAGTAGGGG+TGG - chr3_3:71717793-71717812 None:intergenic 45.0%
CCCCTACTCGCAAATTTGAA+TGG + chr3_3:71717793-71717812 Msa0469740:intron 45.0%
CTCGCAAATTTGAATGGGTG+TGG + chr3_3:71717799-71717818 Msa0469740:intron 45.0%
AATTTGAATGGGTGTGGTGC+GGG + chr3_3:71717805-71717824 Msa0469740:intron 45.0%
TGTAATAGGAGGGGTAACCT+TGG + chr3_3:71718034-71718053 Msa0469740:intron 45.0%
CAACTTTACCAGTTGAGCCA+AGG - chr3_3:71718054-71718073 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG + chr3_3:71718076-71718095 Msa0469740:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG + chr3_3:71718077-71718096 Msa0469740:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3_3:71718142-71718161 Msa0469740:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr3_3:71718145-71718164 Msa0469740:intron 45.0%
TAGTAAGTACCCTGCCGAAA+GGG + chr3_3:71718357-71718376 Msa0469740:intron 45.0%
AAGGCAAAGGGATCTGTATG+TGG - chr3_3:71718392-71718411 None:intergenic 45.0%
TGCATGTGCATTTCAACTGC+TGG + chr3_3:71718752-71718771 Msa0469740:intron 45.0%
AGGCTTGATGTTCAAGACAG+TGG + chr3_3:71719177-71719196 Msa0469740:intron 45.0%
GTGGCTTATCTGCTCTTGTT+CGG + chr3_3:71719196-71719215 Msa0469740:CDS 45.0%
! GGCACTGAATATTCTTCAGG+TGG + chr3_3:71719242-71719261 Msa0469740:intron 45.0%
TGTGTGAATGCAAGCGAAAG+GGG - chr3_3:71719419-71719438 None:intergenic 45.0%
GTGTGTGAATGCAAGCGAAA+GGG - chr3_3:71719420-71719439 None:intergenic 45.0%
TGTGTGTGAATGCAAGCGAA+AGG - chr3_3:71719421-71719440 None:intergenic 45.0%
TCGCTTGCATTCACACACAA+TGG + chr3_3:71719422-71719441 Msa0469740:intron 45.0%
TGTGTGAATGCAAGCGAAAG+GGG - chr3_3:71719419-71719438 None:intergenic 45.0%
GTGTGTGAATGCAAGCGAAA+GGG - chr3_3:71719420-71719439 None:intergenic 45.0%
TGTGTGTGAATGCAAGCGAA+AGG - chr3_3:71719421-71719440 None:intergenic 45.0%
TCGCTTGCATTCACACACAA+TGG + chr3_3:71719422-71719441 Msa0469740:intron 45.0%
TGTGTCAATGCACACGACAT+GGG - chr3_3:71719779-71719798 None:intergenic 45.0%
! TCGTGTGCATTGACACACTT+CGG + chr3_3:71719782-71719801 Msa0469740:intron 45.0%
GAAGCCGTTTATCTTTGCAC+TGG + chr3_3:71720378-71720397 Msa0469740:CDS 45.0%
CATCCTAACATCCAACTACC+TGG + chr3_3:71720636-71720655 Msa0469740:intron 45.0%
ATTCACCAACTGCACTCGAA+CGG - chr3_3:71720735-71720754 None:intergenic 45.0%
TGTTTGTCGGGTCAAGCATA+AGG - chr3_3:71720811-71720830 None:intergenic 45.0%
GGTATCTTATTGCTGGGAAC+AGG + chr3_3:71720900-71720919 Msa0469740:intron 45.0%
! TCCACGCTGACTACAAACAA+TGG + chr3_3:71720929-71720948 Msa0469740:intron 45.0%
! GAATTAGGGCCTTTTGGCAT+TGG - chr3_3:71720980-71720999 None:intergenic 45.0%
! TTGAGCGAATTAGGGCCTTT+TGG - chr3_3:71720986-71721005 None:intergenic 45.0%
! CAAGGCATGTTGCTTAAGAG+GGG - chr3_3:71721037-71721056 None:intergenic 45.0%
! GCAAGGCATGTTGCTTAAGA+GGG - chr3_3:71721038-71721057 None:intergenic 45.0%
! AGCAAGGCATGTTGCTTAAG+AGG - chr3_3:71721039-71721058 None:intergenic 45.0%
GAAAGGAAAATAGGCTCCTC+AGG + chr3_3:71721092-71721111 Msa0469740:intron 45.0%
CTTACATATGTACAGGCCTG+AGG - chr3_3:71721111-71721130 None:intergenic 45.0%
CTCAGGCCTGTACATATGTA+AGG + chr3_3:71721109-71721128 Msa0469740:intron 45.0%
ATCCAGTTGCATAAAACGGG+GGG - chr3_3:71721420-71721439 None:intergenic 45.0%
TTTGTCATTCTCACGCGTCT+AGG + chr3_3:71721759-71721778 Msa0469740:intron 45.0%
! ATTAAGTCTGAAGTGGGGTG+AGG - chr3_3:71721866-71721885 None:intergenic 45.0%
! GGGACATTAAGTCTGAAGTG+GGG - chr3_3:71721871-71721890 None:intergenic 45.0%
! CGGGACATTAAGTCTGAAGT+GGG - chr3_3:71721872-71721891 None:intergenic 45.0%
ACGGGACATTAAGTCTGAAG+TGG - chr3_3:71721873-71721892 None:intergenic 45.0%
GAAGCCAAATTTCAGGCACT+CGG - chr3_3:71721922-71721941 None:intergenic 45.0%
TGCAACGATAAGCTTCAGCT+TGG + chr3_3:71722136-71722155 Msa0469740:CDS 45.0%
TACACGTGCTAGATCTGCAA+TGG + chr3_3:71722177-71722196 Msa0469740:CDS 45.0%
GCACCATCATATTCAGGTGA+AGG - chr3_3:71722220-71722239 None:intergenic 45.0%
CCTCCTTCTACGATGTACAA+CGG - chr3_3:71722303-71722322 None:intergenic 45.0%
! TGGTGCTAACAGCCTAATAC+TGG + chr3_3:71722331-71722350 Msa0469740:three_prime_UTR 45.0%
! GGTTATGTTGACTGCTCTGA+TGG + chr3_3:71722367-71722386 Msa0469740:three_prime_UTR 45.0%
!! ATAATAATAACAATAATAAA+TGG - chr3_3:71720138-71720157 None:intergenic 5.0%
!! GGGAAGACTGTGTTTTGAGC+GGG + chr3_3:71714922-71714941 Msa0469740:five_prime_UTR 50.0%
GGGTTTAATAACCATGGCGG+AGG + chr3_3:71715061-71715080 Msa0469740:exon 50.0%
!! GGACATCGACTTCACAGACA+AGG + chr3_3:71715097-71715116 Msa0469740:CDS 50.0%
AAGCTTTGCCACCGAAGGAA+GGG - chr3_3:71715148-71715167 None:intergenic 50.0%
! TACTTGTGTCGACGATGTCG+CGG - chr3_3:71715223-71715242 None:intergenic 50.0%
GGGGAAGTTAGAGAGGGAAA+GGG - chr3_3:71715249-71715268 None:intergenic 50.0%
AGGGGAAGTTAGAGAGGGAA+AGG - chr3_3:71715250-71715269 None:intergenic 50.0%
GGACCATACAACAGCAGATG+GGG - chr3_3:71715369-71715388 None:intergenic 50.0%
GAGGACCATACAACAGCAGA+TGG - chr3_3:71715371-71715390 None:intergenic 50.0%
GTTGTATGGTCCTCCTGGAA+CGG + chr3_3:71715377-71715396 Msa0469740:CDS 50.0%
TTGTATGGTCCTCCTGGAAC+GGG + chr3_3:71715378-71715397 Msa0469740:CDS 50.0%
! GATGTTTTACCCGTTCCAGG+AGG - chr3_3:71715390-71715409 None:intergenic 50.0%
! GTCGATGTTTTACCCGTTCC+AGG - chr3_3:71715393-71715412 None:intergenic 50.0%
GCGGTGGCGCGAAAATTATA+CGG + chr3_3:71715420-71715439 Msa0469740:CDS 50.0%
GCCCAATTTGCGTTACGTAG+AGG + chr3_3:71716592-71716611 Msa0469740:CDS 50.0%
GTGCATCTTGATTGCAGTGC+TGG - chr3_3:71716776-71716795 None:intergenic 50.0%
CACTGCAATCAAGATGCACC+CGG + chr3_3:71716777-71716796 Msa0469740:CDS 50.0%
GACATGGACAGCATCAAGAG+GGG - chr3_3:71716813-71716832 None:intergenic 50.0%
GTGACATGGACAGCATCAAG+AGG - chr3_3:71716815-71716834 None:intergenic 50.0%
AGCTACATTCTCACGATGGG+CGG + chr3_3:71716966-71716985 Msa0469740:intron 50.0%
CTATTCCCACCCCTATTTGC+GGG - chr3_3:71717031-71717050 None:intergenic 50.0%
CCTATTCCCACCCCTATTTG+CGG - chr3_3:71717032-71717051 None:intergenic 50.0%
! CTTTTAGTAGGCCGAGCCAT+AGG - chr3_3:71717074-71717093 None:intergenic 50.0%
! TCTATATAGTGTGCGGGCTG+CGG - chr3_3:71717858-71717877 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCT+TGG + chr3_3:71718089-71718108 Msa0469740:intron 50.0%
CTGAAGCTCCCGCATATGTA+GGG - chr3_3:71718185-71718204 None:intergenic 50.0%
ACTGAAGCTCCCGCATATGT+AGG - chr3_3:71718186-71718205 None:intergenic 50.0%
TATTAACGCGGGTATGGGGA+TGG + chr3_3:71718328-71718347 Msa0469740:intron 50.0%
ATTAACGCGGGTATGGGGAT+GGG + chr3_3:71718329-71718348 Msa0469740:intron 50.0%
GTAGTAAGTACCCTGCCGAA+AGG + chr3_3:71718356-71718375 Msa0469740:intron 50.0%
AGGGATCTGTATGTGGCACA+GGG - chr3_3:71718385-71718404 None:intergenic 50.0%
AAGGGATCTGTATGTGGCAC+AGG - chr3_3:71718386-71718405 None:intergenic 50.0%
GCTCTTGTTCGGCTTAGCAA+TGG + chr3_3:71719207-71719226 Msa0469740:CDS 50.0%
GTGTGAATGCAAGCGAAAGG+GGG - chr3_3:71719418-71719437 None:intergenic 50.0%
GTGTGAATGCAAGCGAAAGG+GGG - chr3_3:71719418-71719437 None:intergenic 50.0%
GTGTCAATGCACACGACATG+GGG - chr3_3:71719778-71719797 None:intergenic 50.0%
GTGTGTCAATGCACACGACA+TGG - chr3_3:71719780-71719799 None:intergenic 50.0%
TGCTCAATGTCTTTGGGCAG+TGG - chr3_3:71720408-71720427 None:intergenic 50.0%
GCCATTGTTTGTAGTCAGCG+TGG - chr3_3:71720933-71720952 None:intergenic 50.0%
TGAGTAGCCTGAACCTCAAC+TGG + chr3_3:71721184-71721203 Msa0469740:intron 50.0%
AGCCTGAACCTCAACTGGAA+AGG + chr3_3:71721189-71721208 Msa0469740:intron 50.0%
GTCCTTTCCAGTTGAGGTTC+AGG - chr3_3:71721194-71721213 None:intergenic 50.0%
TCCAGTTGCATAAAACGGGG+GGG - chr3_3:71721419-71721438 None:intergenic 50.0%
GGGAAGAGCTACTATGCAAC+TGG + chr3_3:71721534-71721553 Msa0469740:intron 50.0%
TGGGGTGAGGAGAAAGAACA+GGG - chr3_3:71721853-71721872 None:intergenic 50.0%
AAAGAAGGACGACGCTGCAA+CGG - chr3_3:71721892-71721911 None:intergenic 50.0%
! AGCGTCGTCCTTCTTTTCAG+TGG + chr3_3:71721896-71721915 Msa0469740:intron 50.0%
CCGTTGTACATCGTAGAAGG+AGG + chr3_3:71722300-71722319 Msa0469740:three_prime_UTR 50.0%
!! ACATCGTAGAAGGAGGCATC+AGG + chr3_3:71722307-71722326 Msa0469740:three_prime_UTR 50.0%
AGGATAAGTCTCCTCCGCCA+TGG - chr3_3:71715075-71715094 None:intergenic 55.0%
GGCGGAGGAGACTTATCCTA+TGG + chr3_3:71715076-71715095 Msa0469740:CDS 55.0%
GAAGCTTTGCCACCGAAGGA+AGG - chr3_3:71715149-71715168 None:intergenic 55.0%
TAGCGAAGCTTTGCCACCGA+AGG - chr3_3:71715153-71715172 None:intergenic 55.0%
TCGGTGGCAAAGCTTCGCTA+TGG + chr3_3:71715153-71715172 Msa0469740:CDS 55.0%
CGGTGGCAAAGCTTCGCTAT+GGG + chr3_3:71715154-71715173 Msa0469740:CDS 55.0%
GCAACATCGTCGAGGGATTG+AGG - chr3_3:71715194-71715213 None:intergenic 55.0%
GTGAGCTGCAACATCGTCGA+GGG - chr3_3:71715201-71715220 None:intergenic 55.0%
CTGCTGTTGTATGGTCCTCC+TGG + chr3_3:71715372-71715391 Msa0469740:CDS 55.0%
AACATCGACGATTCTCGCGG+TGG + chr3_3:71715404-71715423 Msa0469740:CDS 55.0%
CATTCCATCAGCCAATGCGG+AGG + chr3_3:71716171-71716190 Msa0469740:intron 55.0%
!! AGAACCTCCGCATTGGCTGA+TGG - chr3_3:71716178-71716197 None:intergenic 55.0%
AAGAGGGGCAAACCGAAACC+GGG - chr3_3:71716798-71716817 None:intergenic 55.0%
CAAGAGGGGCAAACCGAAAC+CGG - chr3_3:71716799-71716818 None:intergenic 55.0%
GCTACATTCTCACGATGGGC+GGG + chr3_3:71716967-71716986 Msa0469740:intron 55.0%
CCGCAAATAGGGGTGGGAAT+AGG + chr3_3:71717029-71717048 Msa0469740:intron 55.0%
AATAGGGGTGGGAATAGGCC+AGG + chr3_3:71717034-71717053 Msa0469740:intron 55.0%
GGCTCGGCCTACTAAAAGCT+CGG + chr3_3:71717076-71717095 Msa0469740:intron 55.0%
GGCCTACTAAAAGCTCGGCT+CGG + chr3_3:71717081-71717100 Msa0469740:intron 55.0%
! TATATAGTGTGCGGGCTGCG+GGG - chr3_3:71717856-71717875 None:intergenic 55.0%
! CTATATAGTGTGCGGGCTGC+GGG - chr3_3:71717857-71717876 None:intergenic 55.0%
AGGGGTAACCTTGGCTCAAC+TGG + chr3_3:71718043-71718062 Msa0469740:intron 55.0%
CATATGTAGGGTCCGGGAAG+GGG - chr3_3:71718173-71718192 None:intergenic 55.0%
GCATATGTAGGGTCCGGGAA+GGG - chr3_3:71718174-71718193 None:intergenic 55.0%
CTTCCCGGACCCTACATATG+CGG + chr3_3:71718173-71718192 Msa0469740:intron 55.0%
TTCCCGGACCCTACATATGC+GGG + chr3_3:71718174-71718193 Msa0469740:intron 55.0%
! TGTGGCACAGGGTACCCTTT+CGG - chr3_3:71718374-71718393 None:intergenic 55.0%
GCCTACCTCCCAATGCCAAA+AGG + chr3_3:71720968-71720987 Msa0469740:intron 55.0%
!! GCCTTTTGGCATTGGGAGGT+AGG - chr3_3:71720972-71720991 None:intergenic 55.0%
!! TAGGGCCTTTTGGCATTGGG+AGG - chr3_3:71720976-71720995 None:intergenic 55.0%
AGTTGCATAAAACGGGGGGG+GGG - chr3_3:71721416-71721435 None:intergenic 55.0%
CAGTTGCATAAAACGGGGGG+GGG - chr3_3:71721417-71721436 None:intergenic 55.0%
CCAGTTGCATAAAACGGGGG+GGG - chr3_3:71721418-71721437 None:intergenic 55.0%
GGGGTGAGGAGAAAGAACAG+GGG - chr3_3:71721852-71721871 None:intergenic 55.0%
GTGGGGTGAGGAGAAAGAAC+AGG - chr3_3:71721854-71721873 None:intergenic 55.0%
AAGAAGGACGACGCTGCAAC+GGG - chr3_3:71721891-71721910 None:intergenic 55.0%
GCACTCGGCCACTGAAAAGA+AGG - chr3_3:71721907-71721926 None:intergenic 55.0%
GTGGCCGAGTGCCTGAAATT+TGG + chr3_3:71721915-71721934 Msa0469740:intron 55.0%
!! CGTAGAAGGAGGCATCAGGA+TGG + chr3_3:71722311-71722330 Msa0469740:three_prime_UTR 55.0%
GGCAAAACCGTCATTGCCGC+CGG + chr3_3:71715119-71715138 Msa0469740:CDS 60.0%
AGGGTTACCGGCGGCAATGA+CGG - chr3_3:71715129-71715148 None:intergenic 60.0%
ACCGAAGGAAGGGTTACCGG+CGG - chr3_3:71715138-71715157 None:intergenic 60.0%
GCCACCGAAGGAAGGGTTAC+CGG - chr3_3:71715141-71715160 None:intergenic 60.0%
GGTGAGCTGCAACATCGTCG+AGG - chr3_3:71715202-71715221 None:intergenic 60.0%
! GGCCGAGCCGAGCTTTTAGT+AGG - chr3_3:71717086-71717105 None:intergenic 60.0%
GCCTATCAAGCCTACCAGGC+CGG + chr3_3:71717189-71717208 Msa0469740:intron 60.0%
ACCGGCCTGGTAGGCTTGAT+AGG - chr3_3:71717193-71717212 None:intergenic 60.0%
ATCAAGCCTACCAGGCCGGT+CGG + chr3_3:71717193-71717212 Msa0469740:intron 60.0%
TACTCGTATACCGACCGGCC+TGG - chr3_3:71717206-71717225 None:intergenic 60.0%
AGTAGGGGTGGGAATGAGCC+GGG - chr3_3:71717781-71717800 None:intergenic 60.0%
GAGTAGGGGTGGGAATGAGC+CGG - chr3_3:71717782-71717801 None:intergenic 60.0%
AATGGGTGTGGTGCGGGTGT+GGG + chr3_3:71717811-71717830 Msa0469740:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3_3:71718158-71718177 Msa0469740:intron 60.0%
CGCATATGTAGGGTCCGGGA+AGG - chr3_3:71718175-71718194 None:intergenic 60.0%
CTCCCGCATATGTAGGGTCC+GGG - chr3_3:71718179-71718198 None:intergenic 60.0%
GCTCCCGCATATGTAGGGTC+CGG - chr3_3:71718180-71718199 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr3_3:71718190-71718209 Msa0469740:intron 60.0%
! CACAGGGTACCCTTTCGGCA+GGG - chr3_3:71718369-71718388 None:intergenic 60.0%
AACTGCACTCGAACGGCTGG+CGG - chr3_3:71720728-71720747 None:intergenic 60.0%
ACCAACTGCACTCGAACGGC+TGG - chr3_3:71720731-71720750 None:intergenic 60.0%
TTGCATAAAACGGGGGGGGG+GGG - chr3_3:71721414-71721433 None:intergenic 60.0%
GTTGCATAAAACGGGGGGGG+GGG - chr3_3:71721415-71721434 None:intergenic 60.0%
! CCCCCCCCGTTTTATGCAAC+TGG + chr3_3:71721415-71721434 Msa0469740:intron 60.0%
GCCGCCGGTAACCCTTCCTT+CGG + chr3_3:71715134-71715153 Msa0469740:CDS 65.0%
GCCGGTAACCCTTCCTTCGG+TGG + chr3_3:71715137-71715156 Msa0469740:CDS 65.0%
AATAGGCCAGGCCGCTCGTC+AGG + chr3_3:71717046-71717065 Msa0469740:intron 65.0%
ATAGGCCAGGCCGCTCGTCA+GGG + chr3_3:71717047-71717066 Msa0469740:intron 65.0%
AGCCATAGGCCCCTGACGAG+CGG - chr3_3:71717060-71717079 None:intergenic 65.0%
CTCGTCAGGGGCCTATGGCT+CGG + chr3_3:71717060-71717079 Msa0469740:intron 65.0%
CGTATACCGACCGGCCTGGT+AGG - chr3_3:71717202-71717221 None:intergenic 65.0%
!! AAGCAAAGCTCGGCTCGGCC+CGG + chr3_3:71717760-71717779 Msa0469740:intron 65.0%
GAATGGGTGTGGTGCGGGTG+TGG + chr3_3:71717810-71717829 Msa0469740:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3_3:71718160-71718179 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr3_3:71718191-71718210 Msa0469740:intron 65.0%
! GCACAGGGTACCCTTTCGGC+AGG - chr3_3:71718370-71718389 None:intergenic 65.0%
GCCAGCCGTTCGAGTGCAGT+TGG + chr3_3:71720727-71720746 Msa0469740:CDS 65.0%
TGCATAAAACGGGGGGGGGG+GGG - chr3_3:71721413-71721432 None:intergenic 65.0%
TAGGCCAGGCCGCTCGTCAG+GGG + chr3_3:71717048-71717067 Msa0469740:intron 70.0%
! ATAGTGTGCGGGCTGCGGGG+CGG - chr3_3:71717853-71717872 None:intergenic 70.0%
ATAAAACGGGGGGGGGGGGG+GGG - chr3_3:71721410-71721429 None:intergenic 70.0%
CATAAAACGGGGGGGGGGGG+GGG - chr3_3:71721411-71721430 None:intergenic 70.0%
GCATAAAACGGGGGGGGGGG+GGG - chr3_3:71721412-71721431 None:intergenic 70.0%
TAGGCCCCTGACGAGCGGCC+TGG - chr3_3:71717055-71717074 None:intergenic 75.0%
GGCCGCTCGTCAGGGGCCTA+TGG + chr3_3:71717055-71717074 Msa0469740:intron 75.0%
TAAAACGGGGGGGGGGGGGG+GGG - chr3_3:71721409-71721428 None:intergenic 75.0%
!! TGCGGGCTGCGGGGCGGACT+GGG - chr3_3:71717847-71717866 None:intergenic 80.0%
! AAAACGGGGGGGGGGGGGGG+GGG - chr3_3:71721408-71721427 None:intergenic 80.0%
!! GTGCGGGCTGCGGGGCGGAC+TGG - chr3_3:71717848-71717867 None:intergenic 85.0%
! AAACGGGGGGGGGGGGGGGG+GGG - chr3_3:71721407-71721426 None:intergenic 85.0%
! GGGGGGGGGGGGGGCGGCAA+AGG - chr3_3:71721394-71721413 None:intergenic 90.0%
! AACGGGGGGGGGGGGGGGGG+GGG - chr3_3:71721406-71721425 None:intergenic 90.0%
! ACGGGGGGGGGGGGGGGGGG+GGG - chr3_3:71721405-71721424 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr3_3 gene 71714908 71722464 71714908 ID=Msa0469740;Name=Msa0469740
chr3_3 mRNA 71714908 71722464 71714908 ID=Msa0469740-mRNA-1;Parent=Msa0469740;Name=Msa0469740-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|1|1|9|248|355
chr3_3 exon 71714908 71715239 71714908 ID=Msa0469740-mRNA-1:exon:17657;Parent=Msa0469740-mRNA-1
chr3_3 exon 71715337 71715553 71715337 ID=Msa0469740-mRNA-1:exon:17658;Parent=Msa0469740-mRNA-1
chr3_3 exon 71716534 71716613 71716534 ID=Msa0469740-mRNA-1:exon:17659;Parent=Msa0469740-mRNA-1
chr3_3 exon 71716708 71716867 71716708 ID=Msa0469740-mRNA-1:exon:17660;Parent=Msa0469740-mRNA-1
chr3_3 exon 71719179 71719260 71719179 ID=Msa0469740-mRNA-1:exon:17661;Parent=Msa0469740-mRNA-1
chr3_3 exon 71720345 71720474 71720345 ID=Msa0469740-mRNA-1:exon:17662;Parent=Msa0469740-mRNA-1
chr3_3 exon 71720557 71720620 71720557 ID=Msa0469740-mRNA-1:exon:17663;Parent=Msa0469740-mRNA-1
chr3_3 exon 71720703 71720771 71720703 ID=Msa0469740-mRNA-1:exon:17664;Parent=Msa0469740-mRNA-1
chr3_3 exon 71722117 71722464 71722117 ID=Msa0469740-mRNA-1:exon:17665;Parent=Msa0469740-mRNA-1
chr3_3 five_prime_UTR 71714908 71715073 71714908 ID=Msa0469740-mRNA-1:five_prime_utr;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71715074 71715239 71715074 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71715337 71715553 71715337 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71716534 71716613 71716534 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71716708 71716867 71716708 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71719179 71719260 71719179 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71720345 71720474 71720345 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71720557 71720620 71720557 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71720703 71720771 71720703 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 CDS 71722117 71722216 71722117 ID=Msa0469740-mRNA-1:cds;Parent=Msa0469740-mRNA-1
chr3_3 three_prime_UTR 71722217 71722464 71722217 ID=Msa0469740-mRNA-1:three_prime_utr;Parent=Msa0469740-mRNA-1
Gene Sequence

>Msa0469740

ATGGCGGAGGAGACTTATCCTATGGACATCGACTTCACAGACAAGGGCAAAACCGTCATTGCCGCCGGTAACCCTTCCTTCGGTGGCAAAGCTTCGCTATGGGTTGAAAAGTATCGTCCTCAATCCCTCGACGATGTTGCAGCTCACCGCGACATCGTCGACACAATTGATAGGTTGACTACTGAGAATAGATTACCCCATCTGCTGTTGTATGGTCCTCCTGGAACGGGTAAAACATCGACGATTCTCGCGGTGGCGCGAAAATTATACGGTGCTCAGTATCATAATATGATTTTGGAACTGAATGCTTCAGATGATAGAGGAATTGATGTAGTTAGACAGCAGATTCAAGATTTTGCTAGCACTCAGAGTCTATCATTTGGCGTCAAACCCTCTGTAAAACTGGTCTTGTTAGATGAAGCAGATGCCATGACTAAGGATGCCCAATTTGCGTTACGTAGAGTCATCGAGAAATATACAAAGAGCACTAGGTTTGCACTTATCTGTAATCATGTAAACAAGATTATCCCAGCACTGCAATCAAGATGCACCCGGTTTCGGTTTGCCCCTCTTGATGCTGTCCATGTCACTGAGAGACTGAAACATGTTATCAATGCTGAAAGGCTTGATGTTCAAGACAGTGGCTTATCTGCTCTTGTTCGGCTTAGCAATGGTGATATGAGAAAGGCACTGAATATTCTTCAGTCAACTCATATGGCCTCTCAGCAGATTACTGAAGAAGCCGTTTATCTTTGCACTGGAAATCCACTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAAAGCTTTAAAAGAATATATGATATGAAAACAAGGAAAGGACTGGCTCTGATTGATATCGTAAGAGAAGTGACAATGTTTGTCTTCAAGATTAACATGCCGCCAGCCGTTCGAGTGCAGTTGGTGAATGATTTGGCTGACATAGAGTACAGATTAAGTTTTGGGTGCAACGATAAGCTTCAGCTTGGATCAGTTGTTGCTACATTTACACGTGCTAGATCTGCAATGGTTGCAGCTGCTGCATAA

Protein sequence

>Msa0469740

MAEETYPMDIDFTDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDIVREVTMFVFKINMPPAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVATFTRARSAMVAAAA*