Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0515560 | XP_003602039.1 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0515560 | sp|Q6YZ54|RFC3_ORYSJ | 80.112 | 357 | 67 | 1 | 2 | 354 | 4 | 360 | 0.0 | 590 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0515560 | G7J4X7 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0050530 | Msa0515560 | 0.803548 | 3.308242e-49 | -8.615850e-47 |
Msa0086160 | Msa0515560 | 0.803191 | 3.921796e-49 | -8.615850e-47 |
Msa0100600 | Msa0515560 | 0.806325 | 8.689920e-50 | -8.615850e-47 |
Msa0100890 | Msa0515560 | 0.811152 | 8.075959e-51 | -8.615850e-47 |
Msa0374270 | Msa0515560 | 0.960306 | 2.080612e-118 | -8.615850e-47 |
Msa0422820 | Msa0515560 | 0.812454 | 4.204739e-51 | -8.615850e-47 |
Msa0469740 | Msa0515560 | 0.989609 | 7.283558e-179 | -8.615850e-47 |
Msa0515110 | Msa0515560 | 0.806809 | 6.867203e-50 | -8.615850e-47 |
Msa0515560 | Msa0580990 | 0.813404 | 2.604130e-51 | -8.615850e-47 |
Msa0515560 | Msa0582460 | 0.801798 | 7.595107e-49 | -8.615850e-47 |
Msa0515560 | Msa0586200 | 0.801118 | 1.046917e-48 | -8.615850e-47 |
Msa0515560 | Msa0663290 | 0.817070 | 3.989190e-52 | -8.615850e-47 |
Msa0515560 | Msa0664070 | 0.811774 | 5.917902e-51 | -8.615850e-47 |
Msa0515560 | Msa0751720 | 0.813043 | 3.124571e-51 | -8.615850e-47 |
Msa0515560 | Msa0931440 | 0.973572 | 1.177344e-136 | -8.615850e-47 |
Msa0515560 | Msa1025200 | 0.840980 | 6.270168e-58 | -8.615850e-47 |
Msa0515560 | Msa1025220 | 0.828329 | 9.550361e-55 | -8.615850e-47 |
Msa0515560 | Msa1026710 | 0.822757 | 1.997253e-53 | -8.615850e-47 |
Msa0515560 | Msa1347610 | 0.815832 | 7.552546e-52 | -8.615850e-47 |
Msa0515560 | Msa1385570 | 0.801443 | 8.983441e-49 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0515560 | MtrunA17_Chr3g0124791 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Msa0515560 | MtrunA17_Chr4g0057341 | 37.346 | 324 | 192 | 4 | 34 | 353 | 17 | 333 | 3.08e-67 | 215 |
Msa0515560 | MtrunA17_Chr3g0125031 | 47.368 | 209 | 104 | 2 | 34 | 236 | 11 | 219 | 1.11e-63 | 206 |
Msa0515560 | MtrunA17_Chr6g0478631 | 24.370 | 357 | 227 | 6 | 33 | 353 | 2 | 351 | 2.37e-32 | 124 |
Msa0515560 | MtrunA17_Chr6g0460841 | 24.496 | 347 | 219 | 6 | 33 | 343 | 2 | 341 | 2.54e-32 | 124 |
Msa0515560 | MtrunA17_Chr3g0145801 | 21.493 | 335 | 217 | 12 | 2 | 304 | 394 | 714 | 1.28e-14 | 75.1 |
Msa0515560 | MtrunA17_Chr5g0404521 | 21.484 | 256 | 167 | 6 | 33 | 264 | 413 | 658 | 7.21e-14 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0515560 | AT1G77470.1 | 77.027 | 370 | 67 | 4 | 1 | 354 | 1 | 368 | 0.0 | 577 |
Msa0515560 | AT1G63160.1 | 38.365 | 318 | 185 | 4 | 34 | 347 | 17 | 327 | 2.83e-67 | 215 |
Msa0515560 | AT1G21690.1 | 38.671 | 331 | 183 | 6 | 34 | 350 | 11 | 335 | 5.20e-66 | 212 |
Msa0515560 | AT1G21690.3 | 48.402 | 219 | 106 | 3 | 34 | 245 | 11 | 229 | 8.37e-66 | 212 |
Msa0515560 | AT1G21690.4 | 38.485 | 330 | 178 | 6 | 34 | 350 | 11 | 328 | 2.29e-64 | 207 |
Msa0515560 | AT1G21690.2 | 38.369 | 331 | 172 | 7 | 34 | 350 | 11 | 323 | 4.75e-64 | 207 |
Msa0515560 | AT5G27740.1 | 26.705 | 352 | 205 | 8 | 33 | 343 | 2 | 341 | 8.03e-36 | 134 |
Msa0515560 | AT1G14460.1 | 23.404 | 235 | 156 | 4 | 36 | 249 | 426 | 657 | 1.85e-11 | 66.2 |
Msa0515560 | AT5G45720.2 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.86e-11 | 65.1 |
Msa0515560 | AT5G45720.1 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.88e-11 | 65.1 |
Msa0515560 | AT1G24290.1 | 31.739 | 230 | 129 | 11 | 36 | 249 | 105 | 322 | 4.62e-11 | 64.3 |
Msa0515560 | AT2G02480.2 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
Msa0515560 | AT2G02480.1 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 541 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACCTCTACGTAACGCAAAT+TGG | 0.189548 | 3_4:-66817023 | None:intergenic |
CCGAGAGAAATGGGGCTTAA+TGG | 0.221849 | 3_4:+66822841 | Msa0515560:three_prime_UTR |
AGATATTTGCTCAATGTCTT+TGG | 0.248728 | 3_4:-66820813 | None:intergenic |
TGTTTCGTTTGTTTAACTTT+TGG | 0.262447 | 3_4:+66822791 | Msa0515560:three_prime_UTR |
CAGTAACACACAAGATTGTT+AGG | 0.277932 | 3_4:+66815330 | None:intergenic |
TATCTCGGTGCACATAAATT+AGG | 0.293780 | 3_4:-66822671 | None:intergenic |
TCAGTATCATAATATGATTT+TGG | 0.311016 | 3_4:+66815875 | Msa0515560:CDS |
ACATTGAGCAAATATCTTAC+TGG | 0.344071 | 3_4:+66820819 | Msa0515560:CDS |
TGCAGGTACAGATTAAGTTT+TGG | 0.348480 | 3_4:+66822509 | Msa0515560:intron |
TAAAATTGAACCGAGAGAAA+TGG | 0.361007 | 3_4:+66822831 | Msa0515560:three_prime_UTR |
CGTCAAACCCTCTGTAAAAC+TGG | 0.370275 | 3_4:+66816963 | Msa0515560:CDS |
AATCAAGATGCACCCGGTTT+CGG | 0.378472 | 3_4:+66817212 | Msa0515560:CDS |
AAAATTGAACCGAGAGAAAT+GGG | 0.378938 | 3_4:+66822832 | Msa0515560:three_prime_UTR |
GATATTTGCTCAATGTCTTT+GGG | 0.389281 | 3_4:-66820812 | None:intergenic |
GTGCATCTTGATTGCAGTGC+TGG | 0.392350 | 3_4:-66817202 | None:intergenic |
TTTCCGTTGTACATCGTAGA+AGG | 0.393244 | 3_4:+66822694 | Msa0515560:three_prime_UTR |
CTGCTGTTGTATGGTCCTCC+TGG | 0.395722 | 3_4:+66815801 | Msa0515560:CDS |
CAAGAGGGGCAAACCGAAAC+CGG | 0.396956 | 3_4:-66817225 | None:intergenic |
AGCACTCAGAGTCTATCATT+TGG | 0.402934 | 3_4:+66815960 | Msa0515560:CDS |
GCCACCGAAGGAAGGGTTAC+CGG | 0.403122 | 3_4:-66815567 | None:intergenic |
ACCTCTACGTAACGCAAATT+GGG | 0.410660 | 3_4:-66817022 | None:intergenic |
TGCTCAATGTCTTTGGGCAG+TGG | 0.410840 | 3_4:-66820806 | None:intergenic |
GCACTCAGAGTCTATCATTT+GGG | 0.412330 | 3_4:+66815961 | Msa0515560:CDS |
AAAGGCACTGAATATTCTTC+AGG | 0.412974 | 3_4:+66819641 | Msa0515560:CDS |
AATACTGGTGTAAAATCGTT+TGG | 0.419316 | 3_4:+66822743 | Msa0515560:three_prime_UTR |
GGTTATGTTGACTGCTCTGA+TGG | 0.433944 | 3_4:+66822764 | Msa0515560:three_prime_UTR |
AGTGCAGTTGGTGAATGATT+TGG | 0.434023 | 3_4:+66821140 | Msa0515560:CDS |
GTGGCTTATCTGCTCTTGTT+CGG | 0.434803 | 3_4:+66819598 | Msa0515560:CDS |
TGGTGCTAACAGCCTAATAC+TGG | 0.441635 | 3_4:+66822728 | Msa0515560:three_prime_UTR |
ACCAACTGCACTCGAACGGC+TGG | 0.444902 | 3_4:-66821129 | None:intergenic |
TTGTATGGTCCTCCTGGAAC+GGG | 0.453099 | 3_4:+66815807 | Msa0515560:CDS |
GCCGCCGGTAACCCTTCCTT+CGG | 0.453827 | 3_4:+66815563 | Msa0515560:CDS |
ATCAGTGCACCATCATATTC+AGG | 0.461846 | 3_4:-66822620 | None:intergenic |
TTTCAGTAAGAAAATAGAAA+TGG | 0.470080 | 3_4:-66815408 | None:intergenic |
TTACCCCATCTGCTGTTGTA+TGG | 0.471783 | 3_4:+66815792 | Msa0515560:CDS |
TCGGTGGCAAAGCTTCGCTA+TGG | 0.473250 | 3_4:+66815582 | Msa0515560:CDS |
ATTTCCAGTGCAAAGATAAA+CGG | 0.476730 | 3_4:-66820783 | None:intergenic |
CCATTAAGCCCCATTTCTCT+CGG | 0.484721 | 3_4:-66822841 | None:intergenic |
ACATCGTAGAAGGAGGCATC+AGG | 0.497206 | 3_4:+66822704 | Msa0515560:three_prime_UTR |
CGGTGGCAAAGCTTCGCTAT+GGG | 0.498078 | 3_4:+66815583 | Msa0515560:CDS |
GAAGCCGTTTATCTTTGCAC+TGG | 0.505763 | 3_4:+66820779 | Msa0515560:CDS |
GCAACATCGTCGAGGGATTG+AGG | 0.509495 | 3_4:-66815620 | None:intergenic |
GGCGGAGGAGACTTATCCTA+TGG | 0.511189 | 3_4:+66815505 | Msa0515560:CDS |
GTTGTATGGTCCTCCTGGAA+CGG | 0.512128 | 3_4:+66815806 | Msa0515560:CDS |
GCGGTGGCGCGAAAATTATA+CGG | 0.514722 | 3_4:+66815849 | Msa0515560:CDS |
CTGAATGCTTCAGATGATAG+AGG | 0.516669 | 3_4:+66815900 | Msa0515560:CDS |
TGAAGCAGATGCCATGACTA+AGG | 0.516889 | 3_4:+66816996 | Msa0515560:CDS |
GAAGCTTTGCCACCGAAGGA+AGG | 0.543002 | 3_4:-66815575 | None:intergenic |
TGCATCTTGATTGCAGTGCT+GGG | 0.544244 | 3_4:-66817201 | None:intergenic |
GCCGGTAACCCTTCCTTCGG+TGG | 0.549196 | 3_4:+66815566 | Msa0515560:CDS |
AGTAACACACAAGATTGTTA+GGG | 0.550275 | 3_4:+66815331 | None:intergenic |
GGCAAAACCGTCATTGCCGC+CGG | 0.553759 | 3_4:+66815548 | Msa0515560:CDS |
GCTCTTGTTCGGCTTAGCAA+TGG | 0.554174 | 3_4:+66819609 | Msa0515560:CDS |
GCCAGCCGTTCGAGTGCAGT+TGG | 0.554697 | 3_4:+66821128 | Msa0515560:CDS |
TGCAACGATAAGCTTCAGCT+TGG | 0.555547 | 3_4:+66822533 | Msa0515560:CDS |
AGGGTTACCGGCGGCAATGA+CGG | 0.559162 | 3_4:-66815555 | None:intergenic |
GAGGACCATACAACAGCAGA+TGG | 0.563295 | 3_4:-66815797 | None:intergenic |
GGGTTTAATAACCATGGCGG+AGG | 0.566041 | 3_4:+66815490 | Msa0515560:exon |
TAGCAATGGTGATATGAGAA+AGG | 0.575803 | 3_4:+66819623 | Msa0515560:CDS |
TACACGTGCTAGATCTGCAA+TGG | 0.578841 | 3_4:+66822574 | Msa0515560:CDS |
TCTGTGAAGTCGATGTCCAT+AGG | 0.581778 | 3_4:-66815521 | None:intergenic |
AAGCTTTGCCACCGAAGGAA+GGG | 0.581985 | 3_4:-66815574 | None:intergenic |
AAGAGGGGCAAACCGAAACC+GGG | 0.584016 | 3_4:-66817224 | None:intergenic |
TATGATATGAAAACAAGGAA+AGG | 0.587538 | 3_4:+66820963 | Msa0515560:CDS |
TATGAAAACAAGGAAAGGAC+TGG | 0.592837 | 3_4:+66820968 | Msa0515560:CDS |
AACTGCACTCGAACGGCTGG+CGG | 0.597817 | 3_4:-66821126 | None:intergenic |
GTGAGCTGCAACATCGTCGA+GGG | 0.599799 | 3_4:-66815627 | None:intergenic |
CACTGCAATCAAGATGCACC+CGG | 0.601545 | 3_4:+66817206 | Msa0515560:CDS |
TAGCGAAGCTTTGCCACCGA+AGG | 0.602957 | 3_4:-66815579 | None:intergenic |
GCACCATCATATTCAGGTGA+AGG | 0.603300 | 3_4:-66822614 | None:intergenic |
ATTCACCAACTGCACTCGAA+CGG | 0.603811 | 3_4:-66821133 | None:intergenic |
TGACATGGACAGCATCAAGA+GGG | 0.608265 | 3_4:-66817240 | None:intergenic |
AAATTGGGCATCCTTAGTCA+TGG | 0.619881 | 3_4:-66817007 | None:intergenic |
GCCCAATTTGCGTTACGTAG+AGG | 0.621180 | 3_4:+66817021 | Msa0515560:CDS |
AACATGTTATCAATGCTGAA+AGG | 0.623395 | 3_4:+66817275 | Msa0515560:CDS |
TAGTTAGGGTTTAATAACCA+TGG | 0.624202 | 3_4:+66815484 | Msa0515560:exon |
AGGATAAGTCTCCTCCGCCA+TGG | 0.624657 | 3_4:-66815501 | None:intergenic |
AGGACCATACAACAGCAGAT+GGG | 0.625782 | 3_4:-66815796 | None:intergenic |
TACTTGTGTCGACGATGTCG+CGG | 0.626145 | 3_4:-66815649 | None:intergenic |
GTTTCAGTCTCTCAGTGACA+TGG | 0.627168 | 3_4:-66817255 | None:intergenic |
CCGTTGTACATCGTAGAAGG+AGG | 0.629509 | 3_4:+66822697 | Msa0515560:three_prime_UTR |
TAACCTTCACCTGAATATGA+TGG | 0.629737 | 3_4:+66822611 | Msa0515560:exon |
GGACCATACAACAGCAGATG+GGG | 0.630103 | 3_4:-66815795 | None:intergenic |
GATGTACAACGGAAATATCT+CGG | 0.630765 | 3_4:-66822686 | None:intergenic |
GACATCGACTTCACAGACAA+GGG | 0.631926 | 3_4:+66815527 | Msa0515560:CDS |
GGACATCGACTTCACAGACA+AGG | 0.636430 | 3_4:+66815526 | Msa0515560:CDS |
GTGACATGGACAGCATCAAG+AGG | 0.637050 | 3_4:-66817241 | None:intergenic |
AGAAATATACAAAGAGCACT+AGG | 0.637557 | 3_4:+66817143 | Msa0515560:CDS |
AGGCTTGATGTTCAAGACAG+TGG | 0.638532 | 3_4:+66819579 | Msa0515560:intron |
GAATATATGATATGAAAACA+AGG | 0.653141 | 3_4:+66820958 | Msa0515560:CDS |
AACATCGACGATTCTCGCGG+TGG | 0.654620 | 3_4:+66815833 | Msa0515560:CDS |
CGTAGAAGGAGGCATCAGGA+TGG | 0.659068 | 3_4:+66822708 | Msa0515560:three_prime_UTR |
GGTGAGCTGCAACATCGTCG+AGG | 0.664996 | 3_4:-66815628 | None:intergenic |
CCTCCTTCTACGATGTACAA+CGG | 0.678119 | 3_4:-66822697 | None:intergenic |
GACATGGACAGCATCAAGAG+GGG | 0.683891 | 3_4:-66817239 | None:intergenic |
ACCGAAGGAAGGGTTACCGG+CGG | 0.687119 | 3_4:-66815564 | None:intergenic |
TAAAACATCGACGATTCTCG+CGG | 0.694200 | 3_4:+66815830 | Msa0515560:CDS |
TTCTTCAGTAATCTGCTGAG+AGG | 0.704249 | 3_4:-66820759 | None:intergenic |
AAATTGAACCGAGAGAAATG+GGG | 0.746077 | 3_4:+66822833 | Msa0515560:three_prime_UTR |
TTAGGGTTTAATAACCATGG+CGG | 0.752952 | 3_4:+66815487 | Msa0515560:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | - | chr3_4:66817670-66817689 | None:intergenic | 0.0% |
!! | ATAAAAATATTTATTCTATC+TGG | + | chr3_4:66819117-66819136 | Msa0515560:intron | 10.0% |
!! | AAAAAAAAAAAAAAAACTCA+AGG | - | chr3_4:66820516-66820535 | None:intergenic | 10.0% |
!!! | ATTGTTATTATTATTTTAGT+TGG | + | chr3_4:66820545-66820564 | Msa0515560:intron | 10.0% |
!! | ATATATTATAACTATTTGTA+AGG | + | chr3_4:66821266-66821285 | Msa0515560:intron | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+CGG | - | chr3_4:66821801-66821820 | None:intergenic | 100.0% |
!!! | AAAAGTTTTTACAAAGTAAA+CGG | - | chr3_4:66816262-66816281 | None:intergenic | 15.0% |
!! | AAAAGCCTATTAATTTAATT+AGG | + | chr3_4:66817573-66817592 | Msa0515560:intron | 15.0% |
!! | TATATTTGTGTTAACTATTA+AGG | + | chr3_4:66817772-66817791 | Msa0515560:intron | 15.0% |
!! | ACAATTGTAAAATTTATAGA+TGG | - | chr3_4:66817895-66817914 | None:intergenic | 15.0% |
!!! | ATGTGTAATATTTTATAAGT+TGG | + | chr3_4:66818634-66818653 | Msa0515560:intron | 15.0% |
!!! | TTTTGTTATTTATTAAAGTG+TGG | + | chr3_4:66818699-66818718 | Msa0515560:intron | 15.0% |
!!! | TTTGTTATTTATTAAAGTGT+GGG | + | chr3_4:66818700-66818719 | Msa0515560:intron | 15.0% |
!! | TATAATATTAGTATAACTTG+TGG | - | chr3_4:66819061-66819080 | None:intergenic | 15.0% |
!! | ATAAGTATGATTTAATGATT+TGG | - | chr3_4:66819184-66819203 | None:intergenic | 15.0% |
!! | TTTGTAAATAAGAAAACTTA+AGG | - | chr3_4:66819679-66819698 | None:intergenic | 15.0% |
!! | TATATGAAGATATTAAGAAA+AGG | - | chr3_4:66819717-66819736 | None:intergenic | 15.0% |
!! | TTCTTAATATCTTCATATAA+AGG | + | chr3_4:66819718-66819737 | Msa0515560:intron | 15.0% |
!! | TAAATTATATATCCTGAATT+CGG | + | chr3_4:66820399-66820418 | Msa0515560:intron | 15.0% |
!! | TTAATGCAAGAATTATAAAA+TGG | - | chr3_4:66820928-66820947 | None:intergenic | 15.0% |
!! | TTTCAGTAAGAAAATAGAAA+TGG | - | chr3_4:66815411-66815430 | None:intergenic | 20.0% |
!!! | TCAGTATCATAATATGATTT+TGG | + | chr3_4:66815875-66815894 | Msa0515560:CDS | 20.0% |
!! | AATTTCATTAAAGTTGAACA+AGG | - | chr3_4:66816236-66816255 | None:intergenic | 20.0% |
!!! | AAAGTTTTTACAAAGTAAAC+GGG | - | chr3_4:66816261-66816280 | None:intergenic | 20.0% |
!! | AGAAGATAAAATGTTAGTTA+GGG | + | chr3_4:66816368-66816387 | Msa0515560:intron | 20.0% |
!!! | GTAAAACTAACACAAATTTT+AGG | + | chr3_4:66816497-66816516 | Msa0515560:intron | 20.0% |
!!! | AAATGTTTTCACAAAGTAAA+CGG | + | chr3_4:66816533-66816552 | Msa0515560:intron | 20.0% |
!! | ATAAAAGTGAAACAAGAATT+TGG | + | chr3_4:66816862-66816881 | Msa0515560:intron | 20.0% |
!! | TAAAAGTGAAACAAGAATTT+GGG | + | chr3_4:66816863-66816882 | Msa0515560:intron | 20.0% |
!! | GTCATACAAAATAATAATTG+TGG | - | chr3_4:66817731-66817750 | None:intergenic | 20.0% |
!! | ACAATAAATATCAAAGACTT+AGG | - | chr3_4:66818327-66818346 | None:intergenic | 20.0% |
!!! | TACTTTAGATGCTTTTTATT+TGG | + | chr3_4:66818398-66818417 | Msa0515560:intron | 20.0% |
!! | TAAATACTATGATGTGTAAT+AGG | + | chr3_4:66818422-66818441 | Msa0515560:intron | 20.0% |
!! | TTACACATCATAGTAAAAAA+GGG | - | chr3_4:66818622-66818641 | None:intergenic | 20.0% |
!! | ATTACACATCATAGTAAAAA+AGG | - | chr3_4:66818623-66818642 | None:intergenic | 20.0% |
!! | TCGATAATAATATGCTATAA+TGG | - | chr3_4:66818821-66818840 | None:intergenic | 20.0% |
!!! | ATTTTTATAAACTTTTGAGC+AGG | - | chr3_4:66819105-66819124 | None:intergenic | 20.0% |
!!! | TTCTAGTTATTAAGTTACTA+AGG | + | chr3_4:66819256-66819275 | Msa0515560:intron | 20.0% |
!!! | AAACATTGTTATTCCATTTT+GGG | + | chr3_4:66819509-66819528 | Msa0515560:intron | 20.0% |
!! | AAAAGAAACACAAATTTACA+AGG | - | chr3_4:66820446-66820465 | None:intergenic | 20.0% |
!!! | AAAGCAAAAAAATGTCATTT+AGG | - | chr3_4:66820714-66820733 | None:intergenic | 20.0% |
!! | ATATCAAATCCATCTATAAA+GGG | - | chr3_4:66820899-66820918 | None:intergenic | 20.0% |
!! | AATATCAAATCCATCTATAA+AGG | - | chr3_4:66820900-66820919 | None:intergenic | 20.0% |
!! | GAATATATGATATGAAAACA+AGG | + | chr3_4:66820958-66820977 | Msa0515560:CDS | 20.0% |
!! | GATCAATAAAATAAATTACC+AGG | - | chr3_4:66821058-66821077 | None:intergenic | 20.0% |
!! | TAACCTAAAAGCTTATTTAA+AGG | - | chr3_4:66821536-66821555 | None:intergenic | 20.0% |
!!! | ATGAATTTTACTCATAAACA+TGG | + | chr3_4:66822409-66822428 | Msa0515560:intron | 20.0% |
!! | TTTTTGTGTGTTTAGTTGAT+AGG | + | chr3_4:66815751-66815770 | Msa0515560:intron | 25.0% |
! | ACATGCAAATTTACTACATA+AGG | - | chr3_4:66816081-66816100 | None:intergenic | 25.0% |
! | AAATTTGCATGTCAAATTTG+AGG | + | chr3_4:66816089-66816108 | Msa0515560:intron | 25.0% |
!!! | TTTGACTTGATTTGTTGTTA+TGG | + | chr3_4:66816115-66816134 | Msa0515560:intron | 25.0% |
!! | ATTTAACTTTGTGTCGAATA+AGG | + | chr3_4:66816174-66816193 | Msa0515560:intron | 25.0% |
! | GAGAAGATAAAATGTTAGTT+AGG | + | chr3_4:66816367-66816386 | Msa0515560:intron | 25.0% |
!! | AATACTGAAAACAGTTCTTT+TGG | + | chr3_4:66816407-66816426 | Msa0515560:intron | 25.0% |
!! | AATGTTTTCACAAAGTAAAC+GGG | + | chr3_4:66816534-66816553 | Msa0515560:intron | 25.0% |
! | TAAACATTAAAGACGATACA+AGG | + | chr3_4:66816710-66816729 | Msa0515560:intron | 25.0% |
!! | TTTGATAGTTAGAAAAGTTG+AGG | - | chr3_4:66816925-66816944 | None:intergenic | 25.0% |
!!! | AAGAATATGAAGAGTGTTAT+AGG | - | chr3_4:66817108-66817127 | None:intergenic | 25.0% |
! | TAAGTAAGTAATAACAGACA+GGG | - | chr3_4:66817308-66817327 | None:intergenic | 25.0% |
! | ATAAGTAAGTAATAACAGAC+AGG | - | chr3_4:66817309-66817328 | None:intergenic | 25.0% |
! | CTAATAACTATATTGACCTT+AGG | - | chr3_4:66817813-66817832 | None:intergenic | 25.0% |
! | TGAAATTTGTAACACAAACT+AGG | + | chr3_4:66818013-66818032 | Msa0515560:intron | 25.0% |
!! | TAATATGCACTTTCTTTTAG+TGG | + | chr3_4:66818346-66818365 | Msa0515560:intron | 25.0% |
!!! | AATATGCTATAATGGATTGA+AGG | - | chr3_4:66818813-66818832 | None:intergenic | 25.0% |
! | GTATATTCTCTTCATTATTC+AGG | + | chr3_4:66819012-66819031 | Msa0515560:intron | 25.0% |
! | TTATTCAGGAAGTTTAATTG+TGG | + | chr3_4:66819026-66819045 | Msa0515560:intron | 25.0% |
! | AATCAGACTAATCAACTAAA+AGG | - | chr3_4:66819208-66819227 | None:intergenic | 25.0% |
!!! | AGATTTTCTAAAATGTTGTG+AGG | + | chr3_4:66819287-66819306 | Msa0515560:intron | 25.0% |
!! | TACTGTCTTTTAATGTCAAA+TGG | + | chr3_4:66819370-66819389 | Msa0515560:intron | 25.0% |
! | GAAGCATAATATTGGAAATA+TGG | + | chr3_4:66819392-66819411 | Msa0515560:intron | 25.0% |
! | AATATTGGAAATATGGAAGA+TGG | + | chr3_4:66819399-66819418 | Msa0515560:intron | 25.0% |
! | TTCGACTGTTATAAAAAAAG+TGG | - | chr3_4:66819491-66819510 | None:intergenic | 25.0% |
!!! | GAAACATTGTTATTCCATTT+TGG | + | chr3_4:66819508-66819527 | Msa0515560:intron | 25.0% |
!!! | TAACGATTTTGAGTTTTACT+AGG | + | chr3_4:66819559-66819578 | Msa0515560:intron | 25.0% |
! | AATACAACTAGTCCTTTAAA+TGG | - | chr3_4:66819913-66819932 | None:intergenic | 25.0% |
! | AATACAACTAGTCCTTTAAA+TGG | - | chr3_4:66819913-66819932 | None:intergenic | 25.0% |
! | CTTGACTGAAACAAAAATTA+CGG | + | chr3_4:66820210-66820229 | Msa0515560:intron | 25.0% |
! | TCTATAAGCATTTATCGTTT+AGG | - | chr3_4:66820482-66820501 | None:intergenic | 25.0% |
! | ATACAAAGACACAATAATTC+AGG | - | chr3_4:66820683-66820702 | None:intergenic | 25.0% |
!! | TACTTTTATCCCTTTATAGA+TGG | + | chr3_4:66820887-66820906 | Msa0515560:intron | 25.0% |
! | TTCTTGCATTAATTTCAAAC+AGG | + | chr3_4:66820936-66820955 | Msa0515560:intron | 25.0% |
! | TATGATATGAAAACAAGGAA+AGG | + | chr3_4:66820963-66820982 | Msa0515560:CDS | 25.0% |
! | AAAATAAATTACCAGGTAGT+TGG | - | chr3_4:66821051-66821070 | None:intergenic | 25.0% |
! | AGAATAGCACATAAAAAAGT+AGG | - | chr3_4:66821189-66821208 | None:intergenic | 25.0% |
! | AAAAAAACTTGAGCTTATGT+GGG | + | chr3_4:66821662-66821681 | Msa0515560:intron | 25.0% |
! | GAAAGAACAGAACAATAATT+TGG | + | chr3_4:66821735-66821754 | Msa0515560:intron | 25.0% |
! | TATCTTAAATTTGCAGAAAG+TGG | + | chr3_4:66821911-66821930 | Msa0515560:intron | 25.0% |
! | ATCTTAAATTTGCAGAAAGT+GGG | + | chr3_4:66821912-66821931 | Msa0515560:intron | 25.0% |
! | TATCTTAAATTTGCAGAAAG+TGG | + | chr3_4:66821911-66821930 | Msa0515560:intron | 25.0% |
! | ATCTTAAATTTGCAGAAAGT+GGG | + | chr3_4:66821912-66821931 | Msa0515560:intron | 25.0% |
! | TAGTAATTTATGAAAATGCC+CGG | + | chr3_4:66822210-66822229 | Msa0515560:intron | 25.0% |
! | ATATGTGTGCTTATCATAAT+TGG | + | chr3_4:66822470-66822489 | Msa0515560:intron | 25.0% |
! | GAATAAAATTTCATTGTTGC+AGG | + | chr3_4:66822492-66822511 | Msa0515560:intron | 25.0% |
!!! | TGTTTCGTTTGTTTAACTTT+TGG | + | chr3_4:66822791-66822810 | Msa0515560:three_prime_UTR | 25.0% |
!! | AACTAGTAGAGCTTTTTCTA+TGG | - | chr3_4:66815469-66815488 | None:intergenic | 30.0% |
TAGAAAAAGCTCTACTAGTT+AGG | + | chr3_4:66815469-66815488 | Msa0515560:five_prime_UTR | 30.0% | |
AGAAAAAGCTCTACTAGTTA+GGG | + | chr3_4:66815470-66815489 | Msa0515560:five_prime_UTR | 30.0% | |
TAGTTAGGGTTTAATAACCA+TGG | + | chr3_4:66815484-66815503 | Msa0515560:exon | 30.0% | |
ATAAACCCTAGAAATGAAAG+GGG | - | chr3_4:66815697-66815716 | None:intergenic | 30.0% | |
GATAAACCCTAGAAATGAAA+GGG | - | chr3_4:66815698-66815717 | None:intergenic | 30.0% | |
TGATAAACCCTAGAAATGAA+AGG | - | chr3_4:66815699-66815718 | None:intergenic | 30.0% | |
! | TCTAGGGTTTATCATTTCTT+CGG | + | chr3_4:66815705-66815724 | Msa0515560:intron | 30.0% |
! | TTTTGTGACTGCATAATAGA+TGG | + | chr3_4:66816033-66816052 | Msa0515560:intron | 30.0% |
TTAAATCGAAGCACATTTCA+CGG | - | chr3_4:66816160-66816179 | None:intergenic | 30.0% | |
! | TTTGAAATGAACCATTGTGA+TGG | + | chr3_4:66816343-66816362 | Msa0515560:intron | 30.0% |
TTGAAATGAACCATTGTGAT+GGG | + | chr3_4:66816344-66816363 | Msa0515560:intron | 30.0% | |
! | AGTTCTTTTGGCATTTTCAT+TGG | + | chr3_4:66816419-66816438 | Msa0515560:intron | 30.0% |
! | ATGAACAAGTGTGCATATTT+TGG | - | chr3_4:66816447-66816466 | None:intergenic | 30.0% |
!!! | GTTAGTTTTACTTGCTAACA+AGG | - | chr3_4:66816488-66816507 | None:intergenic | 30.0% |
! | ATGTTTTCACAAAGTAAACG+GGG | + | chr3_4:66816535-66816554 | Msa0515560:intron | 30.0% |
TCTATCTTCTTTCTGAATAC+CGG | + | chr3_4:66816630-66816649 | Msa0515560:intron | 30.0% | |
TTTCTGAATACCGGATAATT+CGG | + | chr3_4:66816639-66816658 | Msa0515560:intron | 30.0% | |
ATAAAAATGCCCGAATTATC+CGG | - | chr3_4:66816652-66816671 | None:intergenic | 30.0% | |
!! | AGTGTTGATATCAGCTTAAA+GGG | - | chr3_4:66816690-66816709 | None:intergenic | 30.0% |
!! | AAGTGTTGATATCAGCTTAA+AGG | - | chr3_4:66816691-66816710 | None:intergenic | 30.0% |
ATCATGTCTGAAAATTGACA+TGG | - | chr3_4:66816758-66816777 | None:intergenic | 30.0% | |
! | ATGTCAATTTTCAGACATGA+TGG | + | chr3_4:66816757-66816776 | Msa0515560:intron | 30.0% |
!! | AGAAATATACAAAGAGCACT+AGG | + | chr3_4:66817143-66817162 | Msa0515560:CDS | 30.0% |
AACATGTTATCAATGCTGAA+AGG | + | chr3_4:66817275-66817294 | Msa0515560:CDS | 30.0% | |
GCCTAACTCGTTTAATAAAT+GGG | + | chr3_4:66817532-66817551 | Msa0515560:intron | 30.0% | |
ACCCATTTATTAAACGAGTT+AGG | - | chr3_4:66817536-66817555 | None:intergenic | 30.0% | |
CCTGGCCTAATTAAATTAAT+AGG | - | chr3_4:66817581-66817600 | None:intergenic | 30.0% | |
CCTATTAATTTAATTAGGCC+AGG | + | chr3_4:66817578-66817597 | Msa0515560:intron | 30.0% | |
TAATATACTAGTATACCGAC+CGG | - | chr3_4:66817640-66817659 | None:intergenic | 30.0% | |
ATTGTGGTATGAGAATTTGA+AGG | - | chr3_4:66817715-66817734 | None:intergenic | 30.0% | |
!!! | CAAAGGCTTTATTTTAAGTC+TGG | - | chr3_4:66818086-66818105 | None:intergenic | 30.0% |
CTTAAAATAAAGCCTTTGAC+AGG | + | chr3_4:66818088-66818107 | Msa0515560:intron | 30.0% | |
ATACTATGATGTGTAATAGG+AGG | + | chr3_4:66818425-66818444 | Msa0515560:intron | 30.0% | |
TACTATGATGTGTAATAGGA+GGG | + | chr3_4:66818426-66818445 | Msa0515560:intron | 30.0% | |
!!! | GTGGGTATTTTTTATTAACG+CGG | + | chr3_4:66818718-66818737 | Msa0515560:intron | 30.0% |
!!! | TGGGTATTTTTTATTAACGC+GGG | + | chr3_4:66818719-66818738 | Msa0515560:intron | 30.0% |
!!! | ATTTTTTATTAACGCGGGTA+TGG | + | chr3_4:66818724-66818743 | Msa0515560:intron | 30.0% |
!!! | TTTTTTATTAACGCGGGTAT+GGG | + | chr3_4:66818725-66818744 | Msa0515560:intron | 30.0% |
!! | TATAATGGATTGAAGGCAAA+GGG | - | chr3_4:66818806-66818825 | None:intergenic | 30.0% |
TATTATCGAGTGTCCTTAAA+TGG | + | chr3_4:66818832-66818851 | Msa0515560:intron | 30.0% | |
AGTAAAACTGCAACCATTTA+AGG | - | chr3_4:66818848-66818867 | None:intergenic | 30.0% | |
! | GTCAAATGGAAGCATAATAT+TGG | + | chr3_4:66819384-66819403 | Msa0515560:intron | 30.0% |
!!! | TTGTTATTCCATTTTGGGAT+TGG | + | chr3_4:66819514-66819533 | Msa0515560:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | + | chr3_4:66819758-66819777 | Msa0515560:intron | 30.0% |
! | TCTTGTCTGAAACAAAAATC+AGG | + | chr3_4:66819849-66819868 | Msa0515560:intron | 30.0% |
! | CTTGTCTGAAACAAAAATCA+GGG | + | chr3_4:66819850-66819869 | Msa0515560:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | + | chr3_4:66819758-66819777 | Msa0515560:intron | 30.0% |
! | TCTTGTCTGAAACAAAAATC+AGG | + | chr3_4:66819849-66819868 | Msa0515560:intron | 30.0% |
! | CTTGTCTGAAACAAAAATCA+GGG | + | chr3_4:66819850-66819869 | Msa0515560:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | + | chr3_4:66819758-66819777 | Msa0515560:intron | 30.0% |
! | GGAGAATCAAACTATTTTGT+GGG | + | chr3_4:66819759-66819778 | Msa0515560:intron | 30.0% |
ATACTAAAACTGAGTAGTAC+TGG | - | chr3_4:66820153-66820172 | None:intergenic | 30.0% | |
! | AAGTTTGATTGTTTCTTGCA+TGG | + | chr3_4:66820595-66820614 | Msa0515560:intron | 30.0% |
TTCAGAACAGCTCTTAAATA+TGG | + | chr3_4:66820635-66820654 | Msa0515560:intron | 30.0% | |
! | TATTTTGCAGTCAACTCATA+TGG | + | chr3_4:66820736-66820755 | Msa0515560:intron | 30.0% |
ATTTCCAGTGCAAAGATAAA+CGG | - | chr3_4:66820786-66820805 | None:intergenic | 30.0% | |
GATATTTGCTCAATGTCTTT+GGG | - | chr3_4:66820815-66820834 | None:intergenic | 30.0% | |
AGATATTTGCTCAATGTCTT+TGG | - | chr3_4:66820816-66820835 | None:intergenic | 30.0% | |
ACATTGAGCAAATATCTTAC+TGG | + | chr3_4:66820819-66820838 | Msa0515560:CDS | 30.0% | |
TTGATGAAAGACATGTTTGT+CGG | - | chr3_4:66821225-66821244 | None:intergenic | 30.0% | |
CTTGTTAATTGAGCGAATTA+GGG | - | chr3_4:66821395-66821414 | None:intergenic | 30.0% | |
TCTTGTTAATTGAGCGAATT+AGG | - | chr3_4:66821396-66821415 | None:intergenic | 30.0% | |
TTAGGCTATGAAAGGAAAAT+AGG | + | chr3_4:66821484-66821503 | Msa0515560:intron | 30.0% | |
! | AGGCCTTTAAATAAGCTTTT+AGG | + | chr3_4:66821530-66821549 | Msa0515560:intron | 30.0% |
AGGACATAAATACCTATCTT+AGG | + | chr3_4:66821610-66821629 | Msa0515560:intron | 30.0% | |
ACCTATCTTAGGTAACAAAT+CGG | + | chr3_4:66821621-66821640 | Msa0515560:intron | 30.0% | |
!!! | TCAAGTTTTTTTGCAAGTGT+TGG | - | chr3_4:66821654-66821673 | None:intergenic | 30.0% |
CAAAAAAACTTGAGCTTATG+TGG | + | chr3_4:66821661-66821680 | Msa0515560:intron | 30.0% | |
ATGATTGTGGTTGTTCAAAA+AGG | - | chr3_4:66821715-66821734 | None:intergenic | 30.0% | |
TGATATCCAGTTGCATAAAA+CGG | - | chr3_4:66821822-66821841 | None:intergenic | 30.0% | |
TGGATATCAGATTCTTAAAC+CGG | + | chr3_4:66821833-66821852 | Msa0515560:intron | 30.0% | |
TGGATATCAGATTCTTAAAC+CGG | + | chr3_4:66821833-66821852 | Msa0515560:intron | 30.0% | |
TAGATACTAGATATGTAGCA+TGG | + | chr3_4:66822182-66822201 | Msa0515560:intron | 30.0% | |
TCATAAACATGGATCAATGA+TGG | + | chr3_4:66822420-66822439 | Msa0515560:intron | 30.0% | |
! | AACGATTTTACACCAGTATT+AGG | - | chr3_4:66822743-66822762 | None:intergenic | 30.0% |
AATACTGGTGTAAAATCGTT+TGG | + | chr3_4:66822743-66822762 | Msa0515560:three_prime_UTR | 30.0% | |
TAAAATTGAACCGAGAGAAA+TGG | + | chr3_4:66822831-66822850 | Msa0515560:three_prime_UTR | 30.0% | |
AAAATTGAACCGAGAGAAAT+GGG | + | chr3_4:66822832-66822851 | Msa0515560:three_prime_UTR | 30.0% | |
TTAGGGTTTAATAACCATGG+CGG | + | chr3_4:66815487-66815506 | Msa0515560:exon | 35.0% | |
TAACTTCCCCTTTCATTTCT+AGG | + | chr3_4:66815688-66815707 | Msa0515560:intron | 35.0% | |
AACTTCCCCTTTCATTTCTA+GGG | + | chr3_4:66815689-66815708 | Msa0515560:intron | 35.0% | |
! | TTCCTAACTTCCTTTTGTGT+GGG | + | chr3_4:66815994-66816013 | Msa0515560:intron | 35.0% |
! | ACAAGGAAAGCATGGATAAA+TGG | - | chr3_4:66816219-66816238 | None:intergenic | 35.0% |
AAAGTTGAACAAGGAAAGCA+TGG | - | chr3_4:66816227-66816246 | None:intergenic | 35.0% | |
TGAAATGAACCATTGTGATG+GGG | + | chr3_4:66816345-66816364 | Msa0515560:intron | 35.0% | |
TTCTGAATACCGGATAATTC+GGG | + | chr3_4:66816640-66816659 | Msa0515560:intron | 35.0% | |
! | GTGTTGATATCAGCTTAAAG+GGG | - | chr3_4:66816689-66816708 | None:intergenic | 35.0% |
TGAAAATTGACATGGACATG+AGG | - | chr3_4:66816750-66816769 | None:intergenic | 35.0% | |
! | AACAAGACCAGTTTTACAGA+GGG | - | chr3_4:66816973-66816992 | None:intergenic | 35.0% |
! | TAACAAGACCAGTTTTACAG+AGG | - | chr3_4:66816974-66816993 | None:intergenic | 35.0% |
AGTGTTATAGGTCAAGAAAC+TGG | - | chr3_4:66817096-66817115 | None:intergenic | 35.0% | |
AAACCCAATCCCAAAAATAC+GGG | - | chr3_4:66817428-66817447 | None:intergenic | 35.0% | |
CAAACCCAATCCCAAAAATA+CGG | - | chr3_4:66817429-66817448 | None:intergenic | 35.0% | |
!!! | GTATTTTTGGGATTGGGTTT+GGG | + | chr3_4:66817428-66817447 | Msa0515560:intron | 35.0% |
GGCCTAACTCGTTTAATAAA+TGG | + | chr3_4:66817531-66817550 | Msa0515560:intron | 35.0% | |
AATTTAATTAGGCCAGGCTT+AGG | + | chr3_4:66817584-66817603 | Msa0515560:intron | 35.0% | |
!!! | CTTTTTTATAAGCCTAAGCC+TGG | - | chr3_4:66817599-66817618 | None:intergenic | 35.0% |
AGTACGTTGCACAAATTGAA+AGG | + | chr3_4:66817963-66817982 | Msa0515560:intron | 35.0% | |
! | CACAAACTAGGCTTTTAAAC+AGG | + | chr3_4:66818025-66818044 | Msa0515560:intron | 35.0% |
! | AGGCTTTTAAACAGGCTAAT+AGG | + | chr3_4:66818033-66818052 | Msa0515560:intron | 35.0% |
!! | GCCAGACCAAACTTTTAAAA+AGG | + | chr3_4:66818055-66818074 | Msa0515560:intron | 35.0% |
!! | GCCTTTTTAAAAGTTTGGTC+TGG | - | chr3_4:66818059-66818078 | None:intergenic | 35.0% |
!! | ACCAAACTTTTAAAAAGGCC+AGG | + | chr3_4:66818060-66818079 | Msa0515560:intron | 35.0% |
TAAAGCCTTTGACAGGTAAA+AGG | + | chr3_4:66818095-66818114 | Msa0515560:intron | 35.0% | |
AAAAACTAAGGCCTAAGTCT+TGG | - | chr3_4:66818121-66818140 | None:intergenic | 35.0% | |
!!! | AGGCCTTAGTTTTTTCAACT+AGG | + | chr3_4:66818127-66818146 | Msa0515560:intron | 35.0% |
AGGCCTAGTTGAAAAAACTA+AGG | - | chr3_4:66818133-66818152 | None:intergenic | 35.0% | |
TAGCCTATTTAAGCAAAGCT+CGG | + | chr3_4:66818152-66818171 | Msa0515560:intron | 35.0% | |
AGTGTAGTCTATATAGTGTG+CGG | - | chr3_4:66818267-66818286 | None:intergenic | 35.0% | |
ACTATGATGTGTAATAGGAG+GGG | + | chr3_4:66818427-66818446 | Msa0515560:intron | 35.0% | |
!!! | TTACCCTGTTTTTACACAAG+AGG | - | chr3_4:66818523-66818542 | None:intergenic | 35.0% |
TCTTGTGTAAAAACAGGGTA+AGG | + | chr3_4:66818522-66818541 | Msa0515560:intron | 35.0% | |
! | TTTTTATTAACGCGGGTATG+GGG | + | chr3_4:66818726-66818745 | Msa0515560:intron | 35.0% |
!! | CTATAATGGATTGAAGGCAA+AGG | - | chr3_4:66818807-66818826 | None:intergenic | 35.0% |
GATGCAAACTTCTCGTATTA+TGG | - | chr3_4:66818938-66818957 | None:intergenic | 35.0% | |
! | AAGTTTAATTGTGGCTTGCA+TGG | + | chr3_4:66819035-66819054 | Msa0515560:intron | 35.0% |
CTAAAATGTTGTGAGGATTG+AGG | + | chr3_4:66819294-66819313 | Msa0515560:intron | 35.0% | |
TGTACCACACTATCACTTAA+TGG | - | chr3_4:66819322-66819341 | None:intergenic | 35.0% | |
AAGACAGTATGTGATTCACA+TGG | - | chr3_4:66819359-66819378 | None:intergenic | 35.0% | |
CAAGAAGTGAGACATTTCAA+AGG | - | chr3_4:66819445-66819464 | None:intergenic | 35.0% | |
!! | CTTTGAAATGTCTCACTTCT+TGG | + | chr3_4:66819443-66819462 | Msa0515560:intron | 35.0% |
TAGCAATGGTGATATGAGAA+AGG | + | chr3_4:66819623-66819642 | Msa0515560:CDS | 35.0% | |
!! | AAAGGCACTGAATATTCTTC+AGG | + | chr3_4:66819641-66819660 | Msa0515560:CDS | 35.0% |
! | AGGAGTAGTTGTATTTGTTG+TGG | + | chr3_4:66819738-66819757 | Msa0515560:intron | 35.0% |
TCGAGACAACATCCATTTAA+AGG | + | chr3_4:66819898-66819917 | Msa0515560:intron | 35.0% | |
!! | AGGACTAGTTGTATTTGTTG+TGG | + | chr3_4:66819918-66819937 | Msa0515560:intron | 35.0% |
TCGAGACAACATCCATTTAA+AGG | + | chr3_4:66819898-66819917 | Msa0515560:intron | 35.0% | |
!! | AGGACTAGTTGTATTTGTTG+TGG | + | chr3_4:66819918-66819937 | Msa0515560:intron | 35.0% |
TTACGGTAGCTAGATATACA+TGG | + | chr3_4:66820227-66820246 | Msa0515560:intron | 35.0% | |
TATATCCTGAATTCGGTACA+TGG | + | chr3_4:66820406-66820425 | Msa0515560:intron | 35.0% | |
AGAAAAATTGCGCTCAGATT+TGG | - | chr3_4:66820573-66820592 | None:intergenic | 35.0% | |
TATGAAAACAAGGAAAGGAC+TGG | + | chr3_4:66820968-66820987 | Msa0515560:CDS | 35.0% | |
!! | TTACACTTTGTTGTTGTCAC+AGG | + | chr3_4:66821082-66821101 | Msa0515560:intron | 35.0% |
TGATGAAAGACATGTTTGTC+GGG | - | chr3_4:66821224-66821243 | None:intergenic | 35.0% | |
AGAAAGTGGTATCTTATTGC+TGG | + | chr3_4:66821294-66821313 | Msa0515560:intron | 35.0% | |
GAAAGTGGTATCTTATTGCT+GGG | + | chr3_4:66821295-66821314 | Msa0515560:intron | 35.0% | |
ACAAGATAGATTGCACTCTA+AGG | + | chr3_4:66821410-66821429 | Msa0515560:intron | 35.0% | |
TAGCCTAATAAGAGTCAGTT+GGG | - | chr3_4:66821472-66821491 | None:intergenic | 35.0% | |
ATAGCCTAATAAGAGTCAGT+TGG | - | chr3_4:66821473-66821492 | None:intergenic | 35.0% | |
GACTCTTATTAGGCTATGAA+AGG | + | chr3_4:66821476-66821495 | Msa0515560:intron | 35.0% | |
TAAAGGCCTTACATATGTAC+AGG | - | chr3_4:66821519-66821538 | None:intergenic | 35.0% | |
AAGTCAATCTGTTACTGCTT+TGG | + | chr3_4:66821555-66821574 | Msa0515560:intron | 35.0% | |
ATTTATGTCCTTTCCAGTTG+AGG | - | chr3_4:66821601-66821620 | None:intergenic | 35.0% | |
CCTATCTTAGGTAACAAATC+GGG | + | chr3_4:66821622-66821641 | Msa0515560:intron | 35.0% | |
TATGTGGGCGATGTTTAAAT+TGG | + | chr3_4:66821677-66821696 | Msa0515560:intron | 35.0% | |
TGGTTGTTCAAAAAGGAATC+AGG | - | chr3_4:66821708-66821727 | None:intergenic | 35.0% | |
GTTCTGTTCTTTCATGATTG+TGG | - | chr3_4:66821728-66821747 | None:intergenic | 35.0% | |
ATATCCAGTTGCATAAAACG+GGG | - | chr3_4:66821820-66821839 | None:intergenic | 35.0% | |
GATATCCAGTTGCATAAAAC+GGG | - | chr3_4:66821821-66821840 | None:intergenic | 35.0% | |
TAGTTGTACTGCATGCAATA+TGG | + | chr3_4:66822064-66822083 | Msa0515560:intron | 35.0% | |
CTAAGAACCAGAAAGAAAAC+AGG | - | chr3_4:66822446-66822465 | None:intergenic | 35.0% | |
! | TGCAGGTACAGATTAAGTTT+TGG | + | chr3_4:66822509-66822528 | Msa0515560:intron | 35.0% |
! | GCAGGTACAGATTAAGTTTT+GGG | + | chr3_4:66822510-66822529 | Msa0515560:intron | 35.0% |
TAACCTTCACCTGAATATGA+TGG | + | chr3_4:66822611-66822630 | Msa0515560:exon | 35.0% | |
! | TATCTCGGTGCACATAAATT+AGG | - | chr3_4:66822674-66822693 | None:intergenic | 35.0% |
GATGTACAACGGAAATATCT+CGG | - | chr3_4:66822689-66822708 | None:intergenic | 35.0% | |
AAATTGAACCGAGAGAAATG+GGG | + | chr3_4:66822833-66822852 | Msa0515560:three_prime_UTR | 35.0% | |
ATGAAAGGGGAAGTTAGAGA+GGG | - | chr3_4:66815684-66815703 | None:intergenic | 40.0% | |
AATGAAAGGGGAAGTTAGAG+AGG | - | chr3_4:66815685-66815704 | None:intergenic | 40.0% | |
TAAAACATCGACGATTCTCG+CGG | + | chr3_4:66815830-66815849 | Msa0515560:CDS | 40.0% | |
CTGAATGCTTCAGATGATAG+AGG | + | chr3_4:66815900-66815919 | Msa0515560:CDS | 40.0% | |
AGCACTCAGAGTCTATCATT+TGG | + | chr3_4:66815960-66815979 | Msa0515560:CDS | 40.0% | |
GCACTCAGAGTCTATCATTT+GGG | + | chr3_4:66815961-66815980 | Msa0515560:CDS | 40.0% | |
! | CTTCCTAACTTCCTTTTGTG+TGG | + | chr3_4:66815993-66816012 | Msa0515560:intron | 40.0% |
CAGTAAAACACCCACACAAA+AGG | - | chr3_4:66816007-66816026 | None:intergenic | 40.0% | |
TTATCTTCTCCCCATCACAA+TGG | - | chr3_4:66816357-66816376 | None:intergenic | 40.0% | |
TATCATTCCATCAGCCAATG+CGG | + | chr3_4:66816597-66816616 | Msa0515560:intron | 40.0% | |
TAGATATAGAACCTCCGCAT+TGG | - | chr3_4:66816614-66816633 | None:intergenic | 40.0% | |
AAAGCACATGCAAGCAGAAA+GGG | - | chr3_4:66816824-66816843 | None:intergenic | 40.0% | |
! | AAAAGCACATGCAAGCAGAA+AGG | - | chr3_4:66816825-66816844 | None:intergenic | 40.0% |
! | TGCTTGCATGTGCTTTTGAT+TGG | + | chr3_4:66816828-66816847 | Msa0515560:intron | 40.0% |
!! | GCTTGCATGTGCTTTTGATT+GGG | + | chr3_4:66816829-66816848 | Msa0515560:intron | 40.0% |
AAATTGGGCATCCTTAGTCA+TGG | - | chr3_4:66817010-66817029 | None:intergenic | 40.0% | |
ACCTCTACGTAACGCAAATT+GGG | - | chr3_4:66817025-66817044 | None:intergenic | 40.0% | |
TTGAGCTACATTCTCACGAT+GGG | + | chr3_4:66817392-66817411 | Msa0515560:intron | 40.0% | |
! | GGGTAAACACCCGTATTTTT+GGG | + | chr3_4:66817416-66817435 | Msa0515560:intron | 40.0% |
!!! | AACACCCGTATTTTTGGGAT+TGG | + | chr3_4:66817421-66817440 | Msa0515560:intron | 40.0% |
!!! | ACACCCGTATTTTTGGGATT+GGG | + | chr3_4:66817422-66817441 | Msa0515560:intron | 40.0% |
!!! | CGTATTTTTGGGATTGGGTT+TGG | + | chr3_4:66817427-66817446 | Msa0515560:intron | 40.0% |
TTGGGTAATTACCCGCAAAT+AGG | + | chr3_4:66817446-66817465 | Msa0515560:intron | 40.0% | |
TGGGTAATTACCCGCAAATA+GGG | + | chr3_4:66817447-66817466 | Msa0515560:intron | 40.0% | |
! | GCTTGCTACTAATATGCCTA+AGG | + | chr3_4:66817794-66817813 | Msa0515560:intron | 40.0% |
!! | GCCTGGCCTTTTTAAAAGTT+TGG | - | chr3_4:66818064-66818083 | None:intergenic | 40.0% |
!!! | GCTTTATTTTAAGTCTGGCC+TGG | - | chr3_4:66818081-66818100 | None:intergenic | 40.0% |
GAGCTTTGCTTAAATAGGCT+AGG | - | chr3_4:66818153-66818172 | None:intergenic | 40.0% | |
TATTTAAGCAAAGCTCGGCT+CGG | + | chr3_4:66818157-66818176 | Msa0515560:intron | 40.0% | |
CCATTCAAATTTGCGAGTAG+GGG | - | chr3_4:66818198-66818217 | None:intergenic | 40.0% | |
CCCATTCAAATTTGCGAGTA+GGG | - | chr3_4:66818199-66818218 | None:intergenic | 40.0% | |
CCCTACTCGCAAATTTGAAT+GGG | + | chr3_4:66818196-66818215 | Msa0515560:intron | 40.0% | |
ACCCATTCAAATTTGCGAGT+AGG | - | chr3_4:66818200-66818219 | None:intergenic | 40.0% | |
AAATTTGAATGGGTGTGGTG+CGG | + | chr3_4:66818206-66818225 | Msa0515560:intron | 40.0% | |
GTGTAGTCTATATAGTGTGC+GGG | - | chr3_4:66818266-66818285 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGTA+AGG | + | chr3_4:66818472-66818491 | Msa0515560:intron | 40.0% | |
ACAGCCTCTTGTGTAAAAAC+AGG | + | chr3_4:66818516-66818535 | Msa0515560:intron | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | + | chr3_4:66818517-66818536 | Msa0515560:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | + | chr3_4:66818548-66818567 | Msa0515560:intron | 40.0% | |
CATAGTAAAAAAGGGCAACC+CGG | - | chr3_4:66818614-66818633 | None:intergenic | 40.0% | |
! | GGAACCATTAAGTGATAGTG+TGG | + | chr3_4:66819315-66819334 | Msa0515560:intron | 40.0% |
GATGGTAATACATGCTGATC+TGG | + | chr3_4:66819417-66819436 | Msa0515560:intron | 40.0% | |
GCAAGTTACCAATCCCAAAA+TGG | - | chr3_4:66819525-66819544 | None:intergenic | 40.0% | |
!! | CAGGGAAGCTTGTTATAACA+TGG | + | chr3_4:66819868-66819887 | Msa0515560:intron | 40.0% |
!! | CAGGGAAGCTTGTTATAACA+TGG | + | chr3_4:66819868-66819887 | Msa0515560:intron | 40.0% |
!! | ATTAGCACACTTGTTGACTC+AGG | - | chr3_4:66820259-66820278 | None:intergenic | 40.0% |
TAAGACCATGTACCGAATTC+AGG | - | chr3_4:66820414-66820433 | None:intergenic | 40.0% | |
TTCTTCAGTAATCTGCTGAG+AGG | - | chr3_4:66820762-66820781 | None:intergenic | 40.0% | |
TTACCAGGTAGTTGGATGTT+AGG | - | chr3_4:66821043-66821062 | None:intergenic | 40.0% | |
!! | AGTGCAGTTGGTGAATGATT+TGG | + | chr3_4:66821140-66821159 | Msa0515560:CDS | 40.0% |
TTTGTAAGGCTGAGAGAAAG+TGG | + | chr3_4:66821280-66821299 | Msa0515560:intron | 40.0% | |
GTATCTTATTGCTGGGAACA+GGG | + | chr3_4:66821302-66821321 | Msa0515560:intron | 40.0% | |
! | AATTAGGGCCTTTTGGCATT+GGG | - | chr3_4:66821380-66821399 | None:intergenic | 40.0% |
AGTTGGGTAGTTAGAAAGCA+AGG | - | chr3_4:66821456-66821475 | None:intergenic | 40.0% | |
! | CTACCCAACTGACTCTTATT+AGG | + | chr3_4:66821466-66821485 | Msa0515560:intron | 40.0% |
!! | CCCGATTTGTTACCTAAGAT+AGG | - | chr3_4:66821625-66821644 | None:intergenic | 40.0% |
TTAGGTAACAAATCGGGCTA+TGG | + | chr3_4:66821628-66821647 | Msa0515560:intron | 40.0% | |
TATCCAGTTGCATAAAACGG+GGG | - | chr3_4:66821819-66821838 | None:intergenic | 40.0% | |
ACAGCTACGTATACATGTAC+CGG | - | chr3_4:66821855-66821874 | None:intergenic | 40.0% | |
ACAGCTACGTATACATGTAC+CGG | - | chr3_4:66821855-66821874 | None:intergenic | 40.0% | |
AGGTGTACAAATGGTCATTC+AGG | - | chr3_4:66822126-66822145 | None:intergenic | 40.0% | |
CACACAAGTAGGTGTACAAA+TGG | - | chr3_4:66822135-66822154 | None:intergenic | 40.0% | |
AGGGGATATGTCTATATTCC+GGG | - | chr3_4:66822231-66822250 | None:intergenic | 40.0% | |
CAGGGGATATGTCTATATTC+CGG | - | chr3_4:66822232-66822251 | None:intergenic | 40.0% | |
GTCAGATGAAGCCAAATTTC+AGG | - | chr3_4:66822326-66822345 | None:intergenic | 40.0% | |
TCTAGCACATACATAACGAC+TGG | - | chr3_4:66822348-66822367 | None:intergenic | 40.0% | |
! | ATGATGGCCTGTTTTCTTTC+TGG | + | chr3_4:66822436-66822455 | Msa0515560:intron | 40.0% |
ATCAGTGCACCATCATATTC+AGG | - | chr3_4:66822623-66822642 | None:intergenic | 40.0% | |
TTTCCGTTGTACATCGTAGA+AGG | + | chr3_4:66822694-66822713 | Msa0515560:three_prime_UTR | 40.0% | |
!! | AGGGAAGACTGTGTTTTGAG+CGG | + | chr3_4:66815350-66815369 | Msa0515560:five_prime_UTR | 45.0% |
TCTGTGAAGTCGATGTCCAT+AGG | - | chr3_4:66815524-66815543 | None:intergenic | 45.0% | |
!! | GACATCGACTTCACAGACAA+GGG | + | chr3_4:66815527-66815546 | Msa0515560:CDS | 45.0% |
TTACCCCATCTGCTGTTGTA+TGG | + | chr3_4:66815792-66815811 | Msa0515560:CDS | 45.0% | |
AGGACCATACAACAGCAGAT+GGG | - | chr3_4:66815799-66815818 | None:intergenic | 45.0% | |
CACCCACACAAAAGGAAGTT+AGG | - | chr3_4:66815999-66816018 | None:intergenic | 45.0% | |
TCGAAGCACATTTCACGGTA+TGG | - | chr3_4:66816155-66816174 | None:intergenic | 45.0% | |
CGCTAATTACTGCTGAACTC+TGG | - | chr3_4:66816561-66816580 | None:intergenic | 45.0% | |
GAGTTCAGCAGTAATTAGCG+TGG | + | chr3_4:66816561-66816580 | Msa0515560:intron | 45.0% | |
CGTCAAACCCTCTGTAAAAC+TGG | + | chr3_4:66816963-66816982 | Msa0515560:CDS | 45.0% | |
TGAAGCAGATGCCATGACTA+AGG | + | chr3_4:66816996-66817015 | Msa0515560:CDS | 45.0% | |
CACCTCTACGTAACGCAAAT+TGG | - | chr3_4:66817026-66817045 | None:intergenic | 45.0% | |
TGCATCTTGATTGCAGTGCT+GGG | - | chr3_4:66817204-66817223 | None:intergenic | 45.0% | |
AATCAAGATGCACCCGGTTT+CGG | + | chr3_4:66817212-66817231 | Msa0515560:CDS | 45.0% | |
TGACATGGACAGCATCAAGA+GGG | - | chr3_4:66817243-66817262 | None:intergenic | 45.0% | |
GTTTCAGTCTCTCAGTGACA+TGG | - | chr3_4:66817258-66817277 | None:intergenic | 45.0% | |
GTTGAGCTACATTCTCACGA+TGG | + | chr3_4:66817391-66817410 | Msa0515560:intron | 45.0% | |
! | CGGGTAAACACCCGTATTTT+TGG | + | chr3_4:66817415-66817434 | Msa0515560:intron | 45.0% |
GGGTAATTACCCGCAAATAG+GGG | + | chr3_4:66817448-66817467 | Msa0515560:intron | 45.0% | |
TAATTACCCGCAAATAGGGG+TGG | + | chr3_4:66817451-66817470 | Msa0515560:intron | 45.0% | |
AATTACCCGCAAATAGGGGT+GGG | + | chr3_4:66817452-66817471 | Msa0515560:intron | 45.0% | |
AAAAGCCTATCAAGCCTACC+AGG | + | chr3_4:66817614-66817633 | Msa0515560:intron | 45.0% | |
!! | CTTGGCCTTTTACCTGTCAA+AGG | - | chr3_4:66818103-66818122 | None:intergenic | 45.0% |
CAGGTAAAAGGCCAAGACTT+AGG | + | chr3_4:66818107-66818126 | Msa0515560:intron | 45.0% | |
GAGCCGAGCTTTGCTTAAAT+AGG | - | chr3_4:66818158-66818177 | None:intergenic | 45.0% | |
TCAAATTTGCGAGTAGGGGT+GGG | - | chr3_4:66818194-66818213 | None:intergenic | 45.0% | |
TTCAAATTTGCGAGTAGGGG+TGG | - | chr3_4:66818195-66818214 | None:intergenic | 45.0% | |
CCCCTACTCGCAAATTTGAA+TGG | + | chr3_4:66818195-66818214 | Msa0515560:intron | 45.0% | |
CTCGCAAATTTGAATGGGTG+TGG | + | chr3_4:66818201-66818220 | Msa0515560:intron | 45.0% | |
AATTTGAATGGGTGTGGTGC+GGG | + | chr3_4:66818207-66818226 | Msa0515560:intron | 45.0% | |
TGTAATAGGAGGGGTAACCT+TGG | + | chr3_4:66818436-66818455 | Msa0515560:intron | 45.0% | |
CAACTTTACCAGTTGAGCCA+AGG | - | chr3_4:66818456-66818475 | None:intergenic | 45.0% | |
GTCATGTGACTGTAAGGTCA+CGG | + | chr3_4:66818478-66818497 | Msa0515560:intron | 45.0% | |
TCATGTGACTGTAAGGTCAC+GGG | + | chr3_4:66818479-66818498 | Msa0515560:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | + | chr3_4:66818544-66818563 | Msa0515560:intron | 45.0% | |
GCGTACAATACACCAAATGG+TGG | + | chr3_4:66818547-66818566 | Msa0515560:intron | 45.0% | |
TAGTAAGTACCCTGCCGAAA+GGG | + | chr3_4:66818759-66818778 | Msa0515560:intron | 45.0% | |
AAGGCAAAGGGATCTGTATG+TGG | - | chr3_4:66818794-66818813 | None:intergenic | 45.0% | |
TGCATGTGCATTTCAACTGC+TGG | + | chr3_4:66819154-66819173 | Msa0515560:intron | 45.0% | |
AGGCTTGATGTTCAAGACAG+TGG | + | chr3_4:66819579-66819598 | Msa0515560:intron | 45.0% | |
GTGGCTTATCTGCTCTTGTT+CGG | + | chr3_4:66819598-66819617 | Msa0515560:CDS | 45.0% | |
! | GGCACTGAATATTCTTCAGG+TGG | + | chr3_4:66819644-66819663 | Msa0515560:intron | 45.0% |
TGTGTGAATGCAAGCGAAAG+GGG | - | chr3_4:66819821-66819840 | None:intergenic | 45.0% | |
GTGTGTGAATGCAAGCGAAA+GGG | - | chr3_4:66819822-66819841 | None:intergenic | 45.0% | |
TGTGTGTGAATGCAAGCGAA+AGG | - | chr3_4:66819823-66819842 | None:intergenic | 45.0% | |
TCGCTTGCATTCACACACAA+TGG | + | chr3_4:66819824-66819843 | Msa0515560:intron | 45.0% | |
TGTGTGAATGCAAGCGAAAG+GGG | - | chr3_4:66819821-66819840 | None:intergenic | 45.0% | |
GTGTGTGAATGCAAGCGAAA+GGG | - | chr3_4:66819822-66819841 | None:intergenic | 45.0% | |
TGTGTGTGAATGCAAGCGAA+AGG | - | chr3_4:66819823-66819842 | None:intergenic | 45.0% | |
TCGCTTGCATTCACACACAA+TGG | + | chr3_4:66819824-66819843 | Msa0515560:intron | 45.0% | |
TGTGTCAATGCACACGACAT+GGG | - | chr3_4:66820181-66820200 | None:intergenic | 45.0% | |
! | TCGTGTGCATTGACACACTT+CGG | + | chr3_4:66820184-66820203 | Msa0515560:intron | 45.0% |
GAAGCCGTTTATCTTTGCAC+TGG | + | chr3_4:66820779-66820798 | Msa0515560:CDS | 45.0% | |
CATCCTAACATCCAACTACC+TGG | + | chr3_4:66821037-66821056 | Msa0515560:intron | 45.0% | |
ATTCACCAACTGCACTCGAA+CGG | - | chr3_4:66821136-66821155 | None:intergenic | 45.0% | |
TGTTTGTCGGGTCAAGCATA+AGG | - | chr3_4:66821212-66821231 | None:intergenic | 45.0% | |
GGTATCTTATTGCTGGGAAC+AGG | + | chr3_4:66821301-66821320 | Msa0515560:intron | 45.0% | |
! | TCCACGCTGACTACAAACAA+TGG | + | chr3_4:66821330-66821349 | Msa0515560:intron | 45.0% |
! | GAATTAGGGCCTTTTGGCAT+TGG | - | chr3_4:66821381-66821400 | None:intergenic | 45.0% |
! | TTGAGCGAATTAGGGCCTTT+TGG | - | chr3_4:66821387-66821406 | None:intergenic | 45.0% |
! | CAAGGCATGTTGCTTAAGAG+GGG | - | chr3_4:66821438-66821457 | None:intergenic | 45.0% |
! | GCAAGGCATGTTGCTTAAGA+GGG | - | chr3_4:66821439-66821458 | None:intergenic | 45.0% |
! | AGCAAGGCATGTTGCTTAAG+AGG | - | chr3_4:66821440-66821459 | None:intergenic | 45.0% |
GAAAGGAAAATAGGCTCCTC+AGG | + | chr3_4:66821493-66821512 | Msa0515560:intron | 45.0% | |
CTTACATATGTACAGGCCTG+AGG | - | chr3_4:66821512-66821531 | None:intergenic | 45.0% | |
CTCAGGCCTGTACATATGTA+AGG | + | chr3_4:66821510-66821529 | Msa0515560:intron | 45.0% | |
ATCCAGTTGCATAAAACGGG+GGG | - | chr3_4:66821818-66821837 | None:intergenic | 45.0% | |
GAACGACAAAGCACACAAGT+AGG | - | chr3_4:66822146-66822165 | None:intergenic | 45.0% | |
! | ATTAAGTCTGAAGTGGGGTG+AGG | - | chr3_4:66822263-66822282 | None:intergenic | 45.0% |
! | GGGACATTAAGTCTGAAGTG+GGG | - | chr3_4:66822268-66822287 | None:intergenic | 45.0% |
! | CGGGACATTAAGTCTGAAGT+GGG | - | chr3_4:66822269-66822288 | None:intergenic | 45.0% |
ACGGGACATTAAGTCTGAAG+TGG | - | chr3_4:66822270-66822289 | None:intergenic | 45.0% | |
GAAGCCAAATTTCAGGCACT+CGG | - | chr3_4:66822319-66822338 | None:intergenic | 45.0% | |
TGCAACGATAAGCTTCAGCT+TGG | + | chr3_4:66822533-66822552 | Msa0515560:CDS | 45.0% | |
TACACGTGCTAGATCTGCAA+TGG | + | chr3_4:66822574-66822593 | Msa0515560:CDS | 45.0% | |
GCACCATCATATTCAGGTGA+AGG | - | chr3_4:66822617-66822636 | None:intergenic | 45.0% | |
CCTCCTTCTACGATGTACAA+CGG | - | chr3_4:66822700-66822719 | None:intergenic | 45.0% | |
! | TGGTGCTAACAGCCTAATAC+TGG | + | chr3_4:66822728-66822747 | Msa0515560:three_prime_UTR | 45.0% |
! | GGTTATGTTGACTGCTCTGA+TGG | + | chr3_4:66822764-66822783 | Msa0515560:three_prime_UTR | 45.0% |
!! | ATAATAATAACAATAATAAA+TGG | - | chr3_4:66820539-66820558 | None:intergenic | 5.0% |
!! | GGGAAGACTGTGTTTTGAGC+GGG | + | chr3_4:66815351-66815370 | Msa0515560:five_prime_UTR | 50.0% |
GGGTTTAATAACCATGGCGG+AGG | + | chr3_4:66815490-66815509 | Msa0515560:exon | 50.0% | |
!! | GGACATCGACTTCACAGACA+AGG | + | chr3_4:66815526-66815545 | Msa0515560:CDS | 50.0% |
AAGCTTTGCCACCGAAGGAA+GGG | - | chr3_4:66815577-66815596 | None:intergenic | 50.0% | |
! | TACTTGTGTCGACGATGTCG+CGG | - | chr3_4:66815652-66815671 | None:intergenic | 50.0% |
GGGGAAGTTAGAGAGGGAAA+GGG | - | chr3_4:66815678-66815697 | None:intergenic | 50.0% | |
AGGGGAAGTTAGAGAGGGAA+AGG | - | chr3_4:66815679-66815698 | None:intergenic | 50.0% | |
GGACCATACAACAGCAGATG+GGG | - | chr3_4:66815798-66815817 | None:intergenic | 50.0% | |
GAGGACCATACAACAGCAGA+TGG | - | chr3_4:66815800-66815819 | None:intergenic | 50.0% | |
GTTGTATGGTCCTCCTGGAA+CGG | + | chr3_4:66815806-66815825 | Msa0515560:CDS | 50.0% | |
TTGTATGGTCCTCCTGGAAC+GGG | + | chr3_4:66815807-66815826 | Msa0515560:CDS | 50.0% | |
! | GATGTTTTACCCGTTCCAGG+AGG | - | chr3_4:66815819-66815838 | None:intergenic | 50.0% |
! | GTCGATGTTTTACCCGTTCC+AGG | - | chr3_4:66815822-66815841 | None:intergenic | 50.0% |
GCGGTGGCGCGAAAATTATA+CGG | + | chr3_4:66815849-66815868 | Msa0515560:CDS | 50.0% | |
GCCCAATTTGCGTTACGTAG+AGG | + | chr3_4:66817021-66817040 | Msa0515560:CDS | 50.0% | |
GTGCATCTTGATTGCAGTGC+TGG | - | chr3_4:66817205-66817224 | None:intergenic | 50.0% | |
CACTGCAATCAAGATGCACC+CGG | + | chr3_4:66817206-66817225 | Msa0515560:CDS | 50.0% | |
GACATGGACAGCATCAAGAG+GGG | - | chr3_4:66817242-66817261 | None:intergenic | 50.0% | |
GTGACATGGACAGCATCAAG+AGG | - | chr3_4:66817244-66817263 | None:intergenic | 50.0% | |
AGCTACATTCTCACGATGGG+CGG | + | chr3_4:66817395-66817414 | Msa0515560:intron | 50.0% | |
CTATTCCCACCCCTATTTGC+GGG | - | chr3_4:66817460-66817479 | None:intergenic | 50.0% | |
CCTATTCCCACCCCTATTTG+CGG | - | chr3_4:66817461-66817480 | None:intergenic | 50.0% | |
! | CTTTTAGTAGGCCGAGCCAT+AGG | - | chr3_4:66817503-66817522 | None:intergenic | 50.0% |
! | TCTATATAGTGTGCGGGCTG+CGG | - | chr3_4:66818260-66818279 | None:intergenic | 50.0% |
AAGGTCACGGGTTCAAGTCT+TGG | + | chr3_4:66818491-66818510 | Msa0515560:intron | 50.0% | |
CTGAAGCTCCCGCATATGTA+GGG | - | chr3_4:66818587-66818606 | None:intergenic | 50.0% | |
ACTGAAGCTCCCGCATATGT+AGG | - | chr3_4:66818588-66818607 | None:intergenic | 50.0% | |
TATTAACGCGGGTATGGGGA+TGG | + | chr3_4:66818730-66818749 | Msa0515560:intron | 50.0% | |
ATTAACGCGGGTATGGGGAT+GGG | + | chr3_4:66818731-66818750 | Msa0515560:intron | 50.0% | |
GTAGTAAGTACCCTGCCGAA+AGG | + | chr3_4:66818758-66818777 | Msa0515560:intron | 50.0% | |
AGGGATCTGTATGTGGCACA+GGG | - | chr3_4:66818787-66818806 | None:intergenic | 50.0% | |
AAGGGATCTGTATGTGGCAC+AGG | - | chr3_4:66818788-66818807 | None:intergenic | 50.0% | |
GCTCTTGTTCGGCTTAGCAA+TGG | + | chr3_4:66819609-66819628 | Msa0515560:CDS | 50.0% | |
GTGTGAATGCAAGCGAAAGG+GGG | - | chr3_4:66819820-66819839 | None:intergenic | 50.0% | |
GTGTGAATGCAAGCGAAAGG+GGG | - | chr3_4:66819820-66819839 | None:intergenic | 50.0% | |
GTGTCAATGCACACGACATG+GGG | - | chr3_4:66820180-66820199 | None:intergenic | 50.0% | |
GTGTGTCAATGCACACGACA+TGG | - | chr3_4:66820182-66820201 | None:intergenic | 50.0% | |
TGCTCAATGTCTTTGGGCAG+TGG | - | chr3_4:66820809-66820828 | None:intergenic | 50.0% | |
GCCATTGTTTGTAGTCAGCG+TGG | - | chr3_4:66821334-66821353 | None:intergenic | 50.0% | |
TGAGTAGCCTGAACCTCAAC+TGG | + | chr3_4:66821585-66821604 | Msa0515560:intron | 50.0% | |
AGCCTGAACCTCAACTGGAA+AGG | + | chr3_4:66821590-66821609 | Msa0515560:intron | 50.0% | |
GTCCTTTCCAGTTGAGGTTC+AGG | - | chr3_4:66821595-66821614 | None:intergenic | 50.0% | |
TCCAGTTGCATAAAACGGGG+GGG | - | chr3_4:66821817-66821836 | None:intergenic | 50.0% | |
GGGAAGAGCTACTATGCAAC+TGG | + | chr3_4:66821932-66821951 | Msa0515560:intron | 50.0% | |
TTTGTCGTTCTCACGCGTCT+AGG | + | chr3_4:66822156-66822175 | Msa0515560:intron | 50.0% | |
TGGGGTGAGGAGAAAGAACA+GGG | - | chr3_4:66822250-66822269 | None:intergenic | 50.0% | |
AAAGAAGGACGACGCTGCAA+CGG | - | chr3_4:66822289-66822308 | None:intergenic | 50.0% | |
! | AGCGTCGTCCTTCTTTTCAG+TGG | + | chr3_4:66822293-66822312 | Msa0515560:intron | 50.0% |
CCGTTGTACATCGTAGAAGG+AGG | + | chr3_4:66822697-66822716 | Msa0515560:three_prime_UTR | 50.0% | |
!! | ACATCGTAGAAGGAGGCATC+AGG | + | chr3_4:66822704-66822723 | Msa0515560:three_prime_UTR | 50.0% |
AGGATAAGTCTCCTCCGCCA+TGG | - | chr3_4:66815504-66815523 | None:intergenic | 55.0% | |
GGCGGAGGAGACTTATCCTA+TGG | + | chr3_4:66815505-66815524 | Msa0515560:CDS | 55.0% | |
GAAGCTTTGCCACCGAAGGA+AGG | - | chr3_4:66815578-66815597 | None:intergenic | 55.0% | |
TAGCGAAGCTTTGCCACCGA+AGG | - | chr3_4:66815582-66815601 | None:intergenic | 55.0% | |
TCGGTGGCAAAGCTTCGCTA+TGG | + | chr3_4:66815582-66815601 | Msa0515560:CDS | 55.0% | |
CGGTGGCAAAGCTTCGCTAT+GGG | + | chr3_4:66815583-66815602 | Msa0515560:CDS | 55.0% | |
GCAACATCGTCGAGGGATTG+AGG | - | chr3_4:66815623-66815642 | None:intergenic | 55.0% | |
GTGAGCTGCAACATCGTCGA+GGG | - | chr3_4:66815630-66815649 | None:intergenic | 55.0% | |
CTGCTGTTGTATGGTCCTCC+TGG | + | chr3_4:66815801-66815820 | Msa0515560:CDS | 55.0% | |
AACATCGACGATTCTCGCGG+TGG | + | chr3_4:66815833-66815852 | Msa0515560:CDS | 55.0% | |
CATTCCATCAGCCAATGCGG+AGG | + | chr3_4:66816600-66816619 | Msa0515560:intron | 55.0% | |
!! | AGAACCTCCGCATTGGCTGA+TGG | - | chr3_4:66816607-66816626 | None:intergenic | 55.0% |
AAGAGGGGCAAACCGAAACC+GGG | - | chr3_4:66817227-66817246 | None:intergenic | 55.0% | |
CAAGAGGGGCAAACCGAAAC+CGG | - | chr3_4:66817228-66817247 | None:intergenic | 55.0% | |
GCTACATTCTCACGATGGGC+GGG | + | chr3_4:66817396-66817415 | Msa0515560:intron | 55.0% | |
CCGCAAATAGGGGTGGGAAT+AGG | + | chr3_4:66817458-66817477 | Msa0515560:intron | 55.0% | |
AATAGGGGTGGGAATAGGCC+AGG | + | chr3_4:66817463-66817482 | Msa0515560:intron | 55.0% | |
GGCTCGGCCTACTAAAAGCT+CGG | + | chr3_4:66817505-66817524 | Msa0515560:intron | 55.0% | |
GGCCTACTAAAAGCTCGGCT+CGG | + | chr3_4:66817510-66817529 | Msa0515560:intron | 55.0% | |
TACTAGTATACCGACCGGCC+TGG | - | chr3_4:66817635-66817654 | None:intergenic | 55.0% | |
! | TATATAGTGTGCGGGCTGCG+GGG | - | chr3_4:66818258-66818277 | None:intergenic | 55.0% |
! | CTATATAGTGTGCGGGCTGC+GGG | - | chr3_4:66818259-66818278 | None:intergenic | 55.0% |
AGGGGTAACCTTGGCTCAAC+TGG | + | chr3_4:66818445-66818464 | Msa0515560:intron | 55.0% | |
CATATGTAGGGTCCGGGAAG+GGG | - | chr3_4:66818575-66818594 | None:intergenic | 55.0% | |
GCATATGTAGGGTCCGGGAA+GGG | - | chr3_4:66818576-66818595 | None:intergenic | 55.0% | |
CTTCCCGGACCCTACATATG+CGG | + | chr3_4:66818575-66818594 | Msa0515560:intron | 55.0% | |
TTCCCGGACCCTACATATGC+GGG | + | chr3_4:66818576-66818595 | Msa0515560:intron | 55.0% | |
! | TGTGGCACAGGGTACCCTTT+CGG | - | chr3_4:66818776-66818795 | None:intergenic | 55.0% |
GCCTACCTCCCAATGCCAAA+AGG | + | chr3_4:66821369-66821388 | Msa0515560:intron | 55.0% | |
!! | GCCTTTTGGCATTGGGAGGT+AGG | - | chr3_4:66821373-66821392 | None:intergenic | 55.0% |
!! | TAGGGCCTTTTGGCATTGGG+AGG | - | chr3_4:66821377-66821396 | None:intergenic | 55.0% |
AGTTGCATAAAACGGGGGGG+GGG | - | chr3_4:66821814-66821833 | None:intergenic | 55.0% | |
CAGTTGCATAAAACGGGGGG+GGG | - | chr3_4:66821815-66821834 | None:intergenic | 55.0% | |
CCAGTTGCATAAAACGGGGG+GGG | - | chr3_4:66821816-66821835 | None:intergenic | 55.0% | |
GGGGTGAGGAGAAAGAACAG+GGG | - | chr3_4:66822249-66822268 | None:intergenic | 55.0% | |
GTGGGGTGAGGAGAAAGAAC+AGG | - | chr3_4:66822251-66822270 | None:intergenic | 55.0% | |
AAGAAGGACGACGCTGCAAC+GGG | - | chr3_4:66822288-66822307 | None:intergenic | 55.0% | |
GCACTCGGCCACTGAAAAGA+AGG | - | chr3_4:66822304-66822323 | None:intergenic | 55.0% | |
GTGGCCGAGTGCCTGAAATT+TGG | + | chr3_4:66822312-66822331 | Msa0515560:intron | 55.0% | |
!! | CGTAGAAGGAGGCATCAGGA+TGG | + | chr3_4:66822708-66822727 | Msa0515560:three_prime_UTR | 55.0% |
GGCAAAACCGTCATTGCCGC+CGG | + | chr3_4:66815548-66815567 | Msa0515560:CDS | 60.0% | |
AGGGTTACCGGCGGCAATGA+CGG | - | chr3_4:66815558-66815577 | None:intergenic | 60.0% | |
ACCGAAGGAAGGGTTACCGG+CGG | - | chr3_4:66815567-66815586 | None:intergenic | 60.0% | |
GCCACCGAAGGAAGGGTTAC+CGG | - | chr3_4:66815570-66815589 | None:intergenic | 60.0% | |
GGTGAGCTGCAACATCGTCG+AGG | - | chr3_4:66815631-66815650 | None:intergenic | 60.0% | |
! | GGCCGAGCCGAGCTTTTAGT+AGG | - | chr3_4:66817515-66817534 | None:intergenic | 60.0% |
GCCTATCAAGCCTACCAGGC+CGG | + | chr3_4:66817618-66817637 | Msa0515560:intron | 60.0% | |
ACCGGCCTGGTAGGCTTGAT+AGG | - | chr3_4:66817622-66817641 | None:intergenic | 60.0% | |
ATCAAGCCTACCAGGCCGGT+CGG | + | chr3_4:66817622-66817641 | Msa0515560:intron | 60.0% | |
AGTATACCGACCGGCCTGGT+AGG | - | chr3_4:66817631-66817650 | None:intergenic | 60.0% | |
AGTAGGGGTGGGAATGAGCC+GGG | - | chr3_4:66818183-66818202 | None:intergenic | 60.0% | |
GAGTAGGGGTGGGAATGAGC+CGG | - | chr3_4:66818184-66818203 | None:intergenic | 60.0% | |
AATGGGTGTGGTGCGGGTGT+GGG | + | chr3_4:66818213-66818232 | Msa0515560:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | + | chr3_4:66818560-66818579 | Msa0515560:intron | 60.0% |
CGCATATGTAGGGTCCGGGA+AGG | - | chr3_4:66818577-66818596 | None:intergenic | 60.0% | |
CTCCCGCATATGTAGGGTCC+GGG | - | chr3_4:66818581-66818600 | None:intergenic | 60.0% | |
GCTCCCGCATATGTAGGGTC+CGG | - | chr3_4:66818582-66818601 | None:intergenic | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | + | chr3_4:66818592-66818611 | Msa0515560:intron | 60.0% | |
! | CACAGGGTACCCTTTCGGCA+GGG | - | chr3_4:66818771-66818790 | None:intergenic | 60.0% |
AACTGCACTCGAACGGCTGG+CGG | - | chr3_4:66821129-66821148 | None:intergenic | 60.0% | |
ACCAACTGCACTCGAACGGC+TGG | - | chr3_4:66821132-66821151 | None:intergenic | 60.0% | |
TTGCATAAAACGGGGGGGGG+GGG | - | chr3_4:66821812-66821831 | None:intergenic | 60.0% | |
GTTGCATAAAACGGGGGGGG+GGG | - | chr3_4:66821813-66821832 | None:intergenic | 60.0% | |
! | CCCCCCCCGTTTTATGCAAC+TGG | + | chr3_4:66821813-66821832 | Msa0515560:intron | 60.0% |
GCCGCCGGTAACCCTTCCTT+CGG | + | chr3_4:66815563-66815582 | Msa0515560:CDS | 65.0% | |
GCCGGTAACCCTTCCTTCGG+TGG | + | chr3_4:66815566-66815585 | Msa0515560:CDS | 65.0% | |
AATAGGCCAGGCCGCTCGTC+AGG | + | chr3_4:66817475-66817494 | Msa0515560:intron | 65.0% | |
ATAGGCCAGGCCGCTCGTCA+GGG | + | chr3_4:66817476-66817495 | Msa0515560:intron | 65.0% | |
AGCCATAGGCCCCTGACGAG+CGG | - | chr3_4:66817489-66817508 | None:intergenic | 65.0% | |
CTCGTCAGGGGCCTATGGCT+CGG | + | chr3_4:66817489-66817508 | Msa0515560:intron | 65.0% | |
!! | AAGCAAAGCTCGGCTCGGCC+CGG | + | chr3_4:66818162-66818181 | Msa0515560:intron | 65.0% |
GAATGGGTGTGGTGCGGGTG+TGG | + | chr3_4:66818212-66818231 | Msa0515560:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | - | chr3_4:66818562-66818581 | None:intergenic | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | + | chr3_4:66818593-66818612 | Msa0515560:intron | 65.0% | |
! | GCACAGGGTACCCTTTCGGC+AGG | - | chr3_4:66818772-66818791 | None:intergenic | 65.0% |
GCCAGCCGTTCGAGTGCAGT+TGG | + | chr3_4:66821128-66821147 | Msa0515560:CDS | 65.0% | |
TGCATAAAACGGGGGGGGGG+GGG | - | chr3_4:66821811-66821830 | None:intergenic | 65.0% | |
TAGGCCAGGCCGCTCGTCAG+GGG | + | chr3_4:66817477-66817496 | Msa0515560:intron | 70.0% | |
! | ATAGTGTGCGGGCTGCGGGG+CGG | - | chr3_4:66818255-66818274 | None:intergenic | 70.0% |
ATAAAACGGGGGGGGGGGGG+GGG | - | chr3_4:66821808-66821827 | None:intergenic | 70.0% | |
CATAAAACGGGGGGGGGGGG+GGG | - | chr3_4:66821809-66821828 | None:intergenic | 70.0% | |
GCATAAAACGGGGGGGGGGG+GGG | - | chr3_4:66821810-66821829 | None:intergenic | 70.0% | |
TAGGCCCCTGACGAGCGGCC+TGG | - | chr3_4:66817484-66817503 | None:intergenic | 75.0% | |
GGCCGCTCGTCAGGGGCCTA+TGG | + | chr3_4:66817484-66817503 | Msa0515560:intron | 75.0% | |
TAAAACGGGGGGGGGGGGGG+GGG | - | chr3_4:66821807-66821826 | None:intergenic | 75.0% | |
!! | TGCGGGCTGCGGGGCGGACT+GGG | - | chr3_4:66818249-66818268 | None:intergenic | 80.0% |
! | AAAACGGGGGGGGGGGGGGG+GGG | - | chr3_4:66821806-66821825 | None:intergenic | 80.0% |
!! | GTGCGGGCTGCGGGGCGGAC+TGG | - | chr3_4:66818250-66818269 | None:intergenic | 85.0% |
! | AAACGGGGGGGGGGGGGGGG+GGG | - | chr3_4:66821805-66821824 | None:intergenic | 85.0% |
! | AACGGGGGGGGGGGGGGGGG+GGG | - | chr3_4:66821804-66821823 | None:intergenic | 90.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_4 | gene | 66815337 | 66822860 | 66815337 | ID=Msa0515560;Name=Msa0515560 |
chr3_4 | mRNA | 66815337 | 66822860 | 66815337 | ID=Msa0515560-mRNA-1;Parent=Msa0515560;Name=Msa0515560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|1|1|9|247|355 |
chr3_4 | exon | 66815337 | 66815668 | 66815337 | ID=Msa0515560-mRNA-1:exon:17269;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66815766 | 66815982 | 66815766 | ID=Msa0515560-mRNA-1:exon:17270;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66816963 | 66817042 | 66816963 | ID=Msa0515560-mRNA-1:exon:17271;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66817137 | 66817296 | 66817137 | ID=Msa0515560-mRNA-1:exon:17272;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66819581 | 66819662 | 66819581 | ID=Msa0515560-mRNA-1:exon:17273;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66820746 | 66820875 | 66820746 | ID=Msa0515560-mRNA-1:exon:17274;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66820958 | 66821021 | 66820958 | ID=Msa0515560-mRNA-1:exon:17275;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66821104 | 66821172 | 66821104 | ID=Msa0515560-mRNA-1:exon:17276;Parent=Msa0515560-mRNA-1 |
chr3_4 | exon | 66822514 | 66822860 | 66822514 | ID=Msa0515560-mRNA-1:exon:17277;Parent=Msa0515560-mRNA-1 |
chr3_4 | five_prime_UTR | 66815337 | 66815502 | 66815337 | ID=Msa0515560-mRNA-1:five_prime_utr;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66815503 | 66815668 | 66815503 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66815766 | 66815982 | 66815766 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66816963 | 66817042 | 66816963 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66817137 | 66817296 | 66817137 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66819581 | 66819662 | 66819581 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66820746 | 66820875 | 66820746 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66820958 | 66821021 | 66820958 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66821104 | 66821172 | 66821104 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | CDS | 66822514 | 66822613 | 66822514 | ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1 |
chr3_4 | three_prime_UTR | 66822614 | 66822860 | 66822614 | ID=Msa0515560-mRNA-1:three_prime_utr;Parent=Msa0515560-mRNA-1 |
Gene Sequence |
Protein sequence |