AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0515560


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515560 MtrunA17_Chr3g0124791 98.873 355 4 0 1 355 1 355 0.0 728
Msa0515560 MtrunA17_Chr4g0057341 37.346 324 192 4 34 353 17 333 3.08e-67 215
Msa0515560 MtrunA17_Chr3g0125031 47.368 209 104 2 34 236 11 219 1.11e-63 206
Msa0515560 MtrunA17_Chr6g0478631 24.370 357 227 6 33 353 2 351 2.37e-32 124
Msa0515560 MtrunA17_Chr6g0460841 24.496 347 219 6 33 343 2 341 2.54e-32 124
Msa0515560 MtrunA17_Chr3g0145801 21.493 335 217 12 2 304 394 714 1.28e-14 75.1
Msa0515560 MtrunA17_Chr5g0404521 21.484 256 167 6 33 264 413 658 7.21e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0515560 AT1G77470.1 77.027 370 67 4 1 354 1 368 0.0 577
Msa0515560 AT1G63160.1 38.365 318 185 4 34 347 17 327 2.83e-67 215
Msa0515560 AT1G21690.1 38.671 331 183 6 34 350 11 335 5.20e-66 212
Msa0515560 AT1G21690.3 48.402 219 106 3 34 245 11 229 8.37e-66 212
Msa0515560 AT1G21690.4 38.485 330 178 6 34 350 11 328 2.29e-64 207
Msa0515560 AT1G21690.2 38.369 331 172 7 34 350 11 323 4.75e-64 207
Msa0515560 AT5G27740.1 26.705 352 205 8 33 343 2 341 8.03e-36 134
Msa0515560 AT1G14460.1 23.404 235 156 4 36 249 426 657 1.85e-11 66.2
Msa0515560 AT5G45720.2 22.026 227 159 5 34 245 345 568 3.86e-11 65.1
Msa0515560 AT5G45720.1 22.026 227 159 5 34 245 345 568 3.88e-11 65.1
Msa0515560 AT1G24290.1 31.739 230 129 11 36 249 105 322 4.62e-11 64.3
Msa0515560 AT2G02480.2 22.609 230 155 3 36 245 453 679 8.45e-11 63.9
Msa0515560 AT2G02480.1 22.609 230 155 3 36 245 453 679 8.45e-11 63.9

Find 100 sgRNAs with CRISPR-Local

Find 541 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTCTACGTAACGCAAAT+TGG 0.189548 3_4:-66817023 None:intergenic
CCGAGAGAAATGGGGCTTAA+TGG 0.221849 3_4:+66822841 Msa0515560:three_prime_UTR
AGATATTTGCTCAATGTCTT+TGG 0.248728 3_4:-66820813 None:intergenic
TGTTTCGTTTGTTTAACTTT+TGG 0.262447 3_4:+66822791 Msa0515560:three_prime_UTR
CAGTAACACACAAGATTGTT+AGG 0.277932 3_4:+66815330 None:intergenic
TATCTCGGTGCACATAAATT+AGG 0.293780 3_4:-66822671 None:intergenic
TCAGTATCATAATATGATTT+TGG 0.311016 3_4:+66815875 Msa0515560:CDS
ACATTGAGCAAATATCTTAC+TGG 0.344071 3_4:+66820819 Msa0515560:CDS
TGCAGGTACAGATTAAGTTT+TGG 0.348480 3_4:+66822509 Msa0515560:intron
TAAAATTGAACCGAGAGAAA+TGG 0.361007 3_4:+66822831 Msa0515560:three_prime_UTR
CGTCAAACCCTCTGTAAAAC+TGG 0.370275 3_4:+66816963 Msa0515560:CDS
AATCAAGATGCACCCGGTTT+CGG 0.378472 3_4:+66817212 Msa0515560:CDS
AAAATTGAACCGAGAGAAAT+GGG 0.378938 3_4:+66822832 Msa0515560:three_prime_UTR
GATATTTGCTCAATGTCTTT+GGG 0.389281 3_4:-66820812 None:intergenic
GTGCATCTTGATTGCAGTGC+TGG 0.392350 3_4:-66817202 None:intergenic
TTTCCGTTGTACATCGTAGA+AGG 0.393244 3_4:+66822694 Msa0515560:three_prime_UTR
CTGCTGTTGTATGGTCCTCC+TGG 0.395722 3_4:+66815801 Msa0515560:CDS
CAAGAGGGGCAAACCGAAAC+CGG 0.396956 3_4:-66817225 None:intergenic
AGCACTCAGAGTCTATCATT+TGG 0.402934 3_4:+66815960 Msa0515560:CDS
GCCACCGAAGGAAGGGTTAC+CGG 0.403122 3_4:-66815567 None:intergenic
ACCTCTACGTAACGCAAATT+GGG 0.410660 3_4:-66817022 None:intergenic
TGCTCAATGTCTTTGGGCAG+TGG 0.410840 3_4:-66820806 None:intergenic
GCACTCAGAGTCTATCATTT+GGG 0.412330 3_4:+66815961 Msa0515560:CDS
AAAGGCACTGAATATTCTTC+AGG 0.412974 3_4:+66819641 Msa0515560:CDS
AATACTGGTGTAAAATCGTT+TGG 0.419316 3_4:+66822743 Msa0515560:three_prime_UTR
GGTTATGTTGACTGCTCTGA+TGG 0.433944 3_4:+66822764 Msa0515560:three_prime_UTR
AGTGCAGTTGGTGAATGATT+TGG 0.434023 3_4:+66821140 Msa0515560:CDS
GTGGCTTATCTGCTCTTGTT+CGG 0.434803 3_4:+66819598 Msa0515560:CDS
TGGTGCTAACAGCCTAATAC+TGG 0.441635 3_4:+66822728 Msa0515560:three_prime_UTR
ACCAACTGCACTCGAACGGC+TGG 0.444902 3_4:-66821129 None:intergenic
TTGTATGGTCCTCCTGGAAC+GGG 0.453099 3_4:+66815807 Msa0515560:CDS
GCCGCCGGTAACCCTTCCTT+CGG 0.453827 3_4:+66815563 Msa0515560:CDS
ATCAGTGCACCATCATATTC+AGG 0.461846 3_4:-66822620 None:intergenic
TTTCAGTAAGAAAATAGAAA+TGG 0.470080 3_4:-66815408 None:intergenic
TTACCCCATCTGCTGTTGTA+TGG 0.471783 3_4:+66815792 Msa0515560:CDS
TCGGTGGCAAAGCTTCGCTA+TGG 0.473250 3_4:+66815582 Msa0515560:CDS
ATTTCCAGTGCAAAGATAAA+CGG 0.476730 3_4:-66820783 None:intergenic
CCATTAAGCCCCATTTCTCT+CGG 0.484721 3_4:-66822841 None:intergenic
ACATCGTAGAAGGAGGCATC+AGG 0.497206 3_4:+66822704 Msa0515560:three_prime_UTR
CGGTGGCAAAGCTTCGCTAT+GGG 0.498078 3_4:+66815583 Msa0515560:CDS
GAAGCCGTTTATCTTTGCAC+TGG 0.505763 3_4:+66820779 Msa0515560:CDS
GCAACATCGTCGAGGGATTG+AGG 0.509495 3_4:-66815620 None:intergenic
GGCGGAGGAGACTTATCCTA+TGG 0.511189 3_4:+66815505 Msa0515560:CDS
GTTGTATGGTCCTCCTGGAA+CGG 0.512128 3_4:+66815806 Msa0515560:CDS
GCGGTGGCGCGAAAATTATA+CGG 0.514722 3_4:+66815849 Msa0515560:CDS
CTGAATGCTTCAGATGATAG+AGG 0.516669 3_4:+66815900 Msa0515560:CDS
TGAAGCAGATGCCATGACTA+AGG 0.516889 3_4:+66816996 Msa0515560:CDS
GAAGCTTTGCCACCGAAGGA+AGG 0.543002 3_4:-66815575 None:intergenic
TGCATCTTGATTGCAGTGCT+GGG 0.544244 3_4:-66817201 None:intergenic
GCCGGTAACCCTTCCTTCGG+TGG 0.549196 3_4:+66815566 Msa0515560:CDS
AGTAACACACAAGATTGTTA+GGG 0.550275 3_4:+66815331 None:intergenic
GGCAAAACCGTCATTGCCGC+CGG 0.553759 3_4:+66815548 Msa0515560:CDS
GCTCTTGTTCGGCTTAGCAA+TGG 0.554174 3_4:+66819609 Msa0515560:CDS
GCCAGCCGTTCGAGTGCAGT+TGG 0.554697 3_4:+66821128 Msa0515560:CDS
TGCAACGATAAGCTTCAGCT+TGG 0.555547 3_4:+66822533 Msa0515560:CDS
AGGGTTACCGGCGGCAATGA+CGG 0.559162 3_4:-66815555 None:intergenic
GAGGACCATACAACAGCAGA+TGG 0.563295 3_4:-66815797 None:intergenic
GGGTTTAATAACCATGGCGG+AGG 0.566041 3_4:+66815490 Msa0515560:exon
TAGCAATGGTGATATGAGAA+AGG 0.575803 3_4:+66819623 Msa0515560:CDS
TACACGTGCTAGATCTGCAA+TGG 0.578841 3_4:+66822574 Msa0515560:CDS
TCTGTGAAGTCGATGTCCAT+AGG 0.581778 3_4:-66815521 None:intergenic
AAGCTTTGCCACCGAAGGAA+GGG 0.581985 3_4:-66815574 None:intergenic
AAGAGGGGCAAACCGAAACC+GGG 0.584016 3_4:-66817224 None:intergenic
TATGATATGAAAACAAGGAA+AGG 0.587538 3_4:+66820963 Msa0515560:CDS
TATGAAAACAAGGAAAGGAC+TGG 0.592837 3_4:+66820968 Msa0515560:CDS
AACTGCACTCGAACGGCTGG+CGG 0.597817 3_4:-66821126 None:intergenic
GTGAGCTGCAACATCGTCGA+GGG 0.599799 3_4:-66815627 None:intergenic
CACTGCAATCAAGATGCACC+CGG 0.601545 3_4:+66817206 Msa0515560:CDS
TAGCGAAGCTTTGCCACCGA+AGG 0.602957 3_4:-66815579 None:intergenic
GCACCATCATATTCAGGTGA+AGG 0.603300 3_4:-66822614 None:intergenic
ATTCACCAACTGCACTCGAA+CGG 0.603811 3_4:-66821133 None:intergenic
TGACATGGACAGCATCAAGA+GGG 0.608265 3_4:-66817240 None:intergenic
AAATTGGGCATCCTTAGTCA+TGG 0.619881 3_4:-66817007 None:intergenic
GCCCAATTTGCGTTACGTAG+AGG 0.621180 3_4:+66817021 Msa0515560:CDS
AACATGTTATCAATGCTGAA+AGG 0.623395 3_4:+66817275 Msa0515560:CDS
TAGTTAGGGTTTAATAACCA+TGG 0.624202 3_4:+66815484 Msa0515560:exon
AGGATAAGTCTCCTCCGCCA+TGG 0.624657 3_4:-66815501 None:intergenic
AGGACCATACAACAGCAGAT+GGG 0.625782 3_4:-66815796 None:intergenic
TACTTGTGTCGACGATGTCG+CGG 0.626145 3_4:-66815649 None:intergenic
GTTTCAGTCTCTCAGTGACA+TGG 0.627168 3_4:-66817255 None:intergenic
CCGTTGTACATCGTAGAAGG+AGG 0.629509 3_4:+66822697 Msa0515560:three_prime_UTR
TAACCTTCACCTGAATATGA+TGG 0.629737 3_4:+66822611 Msa0515560:exon
GGACCATACAACAGCAGATG+GGG 0.630103 3_4:-66815795 None:intergenic
GATGTACAACGGAAATATCT+CGG 0.630765 3_4:-66822686 None:intergenic
GACATCGACTTCACAGACAA+GGG 0.631926 3_4:+66815527 Msa0515560:CDS
GGACATCGACTTCACAGACA+AGG 0.636430 3_4:+66815526 Msa0515560:CDS
GTGACATGGACAGCATCAAG+AGG 0.637050 3_4:-66817241 None:intergenic
AGAAATATACAAAGAGCACT+AGG 0.637557 3_4:+66817143 Msa0515560:CDS
AGGCTTGATGTTCAAGACAG+TGG 0.638532 3_4:+66819579 Msa0515560:intron
GAATATATGATATGAAAACA+AGG 0.653141 3_4:+66820958 Msa0515560:CDS
AACATCGACGATTCTCGCGG+TGG 0.654620 3_4:+66815833 Msa0515560:CDS
CGTAGAAGGAGGCATCAGGA+TGG 0.659068 3_4:+66822708 Msa0515560:three_prime_UTR
GGTGAGCTGCAACATCGTCG+AGG 0.664996 3_4:-66815628 None:intergenic
CCTCCTTCTACGATGTACAA+CGG 0.678119 3_4:-66822697 None:intergenic
GACATGGACAGCATCAAGAG+GGG 0.683891 3_4:-66817239 None:intergenic
ACCGAAGGAAGGGTTACCGG+CGG 0.687119 3_4:-66815564 None:intergenic
TAAAACATCGACGATTCTCG+CGG 0.694200 3_4:+66815830 Msa0515560:CDS
TTCTTCAGTAATCTGCTGAG+AGG 0.704249 3_4:-66820759 None:intergenic
AAATTGAACCGAGAGAAATG+GGG 0.746077 3_4:+66822833 Msa0515560:three_prime_UTR
TTAGGGTTTAATAACCATGG+CGG 0.752952 3_4:+66815487 Msa0515560:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG - chr3_4:66817670-66817689 None:intergenic 0.0%
!! ATAAAAATATTTATTCTATC+TGG + chr3_4:66819117-66819136 Msa0515560:intron 10.0%
!! AAAAAAAAAAAAAAAACTCA+AGG - chr3_4:66820516-66820535 None:intergenic 10.0%
!!! ATTGTTATTATTATTTTAGT+TGG + chr3_4:66820545-66820564 Msa0515560:intron 10.0%
!! ATATATTATAACTATTTGTA+AGG + chr3_4:66821266-66821285 Msa0515560:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+CGG - chr3_4:66821801-66821820 None:intergenic 100.0%
!!! AAAAGTTTTTACAAAGTAAA+CGG - chr3_4:66816262-66816281 None:intergenic 15.0%
!! AAAAGCCTATTAATTTAATT+AGG + chr3_4:66817573-66817592 Msa0515560:intron 15.0%
!! TATATTTGTGTTAACTATTA+AGG + chr3_4:66817772-66817791 Msa0515560:intron 15.0%
!! ACAATTGTAAAATTTATAGA+TGG - chr3_4:66817895-66817914 None:intergenic 15.0%
!!! ATGTGTAATATTTTATAAGT+TGG + chr3_4:66818634-66818653 Msa0515560:intron 15.0%
!!! TTTTGTTATTTATTAAAGTG+TGG + chr3_4:66818699-66818718 Msa0515560:intron 15.0%
!!! TTTGTTATTTATTAAAGTGT+GGG + chr3_4:66818700-66818719 Msa0515560:intron 15.0%
!! TATAATATTAGTATAACTTG+TGG - chr3_4:66819061-66819080 None:intergenic 15.0%
!! ATAAGTATGATTTAATGATT+TGG - chr3_4:66819184-66819203 None:intergenic 15.0%
!! TTTGTAAATAAGAAAACTTA+AGG - chr3_4:66819679-66819698 None:intergenic 15.0%
!! TATATGAAGATATTAAGAAA+AGG - chr3_4:66819717-66819736 None:intergenic 15.0%
!! TTCTTAATATCTTCATATAA+AGG + chr3_4:66819718-66819737 Msa0515560:intron 15.0%
!! TAAATTATATATCCTGAATT+CGG + chr3_4:66820399-66820418 Msa0515560:intron 15.0%
!! TTAATGCAAGAATTATAAAA+TGG - chr3_4:66820928-66820947 None:intergenic 15.0%
!! TTTCAGTAAGAAAATAGAAA+TGG - chr3_4:66815411-66815430 None:intergenic 20.0%
!!! TCAGTATCATAATATGATTT+TGG + chr3_4:66815875-66815894 Msa0515560:CDS 20.0%
!! AATTTCATTAAAGTTGAACA+AGG - chr3_4:66816236-66816255 None:intergenic 20.0%
!!! AAAGTTTTTACAAAGTAAAC+GGG - chr3_4:66816261-66816280 None:intergenic 20.0%
!! AGAAGATAAAATGTTAGTTA+GGG + chr3_4:66816368-66816387 Msa0515560:intron 20.0%
!!! GTAAAACTAACACAAATTTT+AGG + chr3_4:66816497-66816516 Msa0515560:intron 20.0%
!!! AAATGTTTTCACAAAGTAAA+CGG + chr3_4:66816533-66816552 Msa0515560:intron 20.0%
!! ATAAAAGTGAAACAAGAATT+TGG + chr3_4:66816862-66816881 Msa0515560:intron 20.0%
!! TAAAAGTGAAACAAGAATTT+GGG + chr3_4:66816863-66816882 Msa0515560:intron 20.0%
!! GTCATACAAAATAATAATTG+TGG - chr3_4:66817731-66817750 None:intergenic 20.0%
!! ACAATAAATATCAAAGACTT+AGG - chr3_4:66818327-66818346 None:intergenic 20.0%
!!! TACTTTAGATGCTTTTTATT+TGG + chr3_4:66818398-66818417 Msa0515560:intron 20.0%
!! TAAATACTATGATGTGTAAT+AGG + chr3_4:66818422-66818441 Msa0515560:intron 20.0%
!! TTACACATCATAGTAAAAAA+GGG - chr3_4:66818622-66818641 None:intergenic 20.0%
!! ATTACACATCATAGTAAAAA+AGG - chr3_4:66818623-66818642 None:intergenic 20.0%
!! TCGATAATAATATGCTATAA+TGG - chr3_4:66818821-66818840 None:intergenic 20.0%
!!! ATTTTTATAAACTTTTGAGC+AGG - chr3_4:66819105-66819124 None:intergenic 20.0%
!!! TTCTAGTTATTAAGTTACTA+AGG + chr3_4:66819256-66819275 Msa0515560:intron 20.0%
!!! AAACATTGTTATTCCATTTT+GGG + chr3_4:66819509-66819528 Msa0515560:intron 20.0%
!! AAAAGAAACACAAATTTACA+AGG - chr3_4:66820446-66820465 None:intergenic 20.0%
!!! AAAGCAAAAAAATGTCATTT+AGG - chr3_4:66820714-66820733 None:intergenic 20.0%
!! ATATCAAATCCATCTATAAA+GGG - chr3_4:66820899-66820918 None:intergenic 20.0%
!! AATATCAAATCCATCTATAA+AGG - chr3_4:66820900-66820919 None:intergenic 20.0%
!! GAATATATGATATGAAAACA+AGG + chr3_4:66820958-66820977 Msa0515560:CDS 20.0%
!! GATCAATAAAATAAATTACC+AGG - chr3_4:66821058-66821077 None:intergenic 20.0%
!! TAACCTAAAAGCTTATTTAA+AGG - chr3_4:66821536-66821555 None:intergenic 20.0%
!!! ATGAATTTTACTCATAAACA+TGG + chr3_4:66822409-66822428 Msa0515560:intron 20.0%
!! TTTTTGTGTGTTTAGTTGAT+AGG + chr3_4:66815751-66815770 Msa0515560:intron 25.0%
! ACATGCAAATTTACTACATA+AGG - chr3_4:66816081-66816100 None:intergenic 25.0%
! AAATTTGCATGTCAAATTTG+AGG + chr3_4:66816089-66816108 Msa0515560:intron 25.0%
!!! TTTGACTTGATTTGTTGTTA+TGG + chr3_4:66816115-66816134 Msa0515560:intron 25.0%
!! ATTTAACTTTGTGTCGAATA+AGG + chr3_4:66816174-66816193 Msa0515560:intron 25.0%
! GAGAAGATAAAATGTTAGTT+AGG + chr3_4:66816367-66816386 Msa0515560:intron 25.0%
!! AATACTGAAAACAGTTCTTT+TGG + chr3_4:66816407-66816426 Msa0515560:intron 25.0%
!! AATGTTTTCACAAAGTAAAC+GGG + chr3_4:66816534-66816553 Msa0515560:intron 25.0%
! TAAACATTAAAGACGATACA+AGG + chr3_4:66816710-66816729 Msa0515560:intron 25.0%
!! TTTGATAGTTAGAAAAGTTG+AGG - chr3_4:66816925-66816944 None:intergenic 25.0%
!!! AAGAATATGAAGAGTGTTAT+AGG - chr3_4:66817108-66817127 None:intergenic 25.0%
! TAAGTAAGTAATAACAGACA+GGG - chr3_4:66817308-66817327 None:intergenic 25.0%
! ATAAGTAAGTAATAACAGAC+AGG - chr3_4:66817309-66817328 None:intergenic 25.0%
! CTAATAACTATATTGACCTT+AGG - chr3_4:66817813-66817832 None:intergenic 25.0%
! TGAAATTTGTAACACAAACT+AGG + chr3_4:66818013-66818032 Msa0515560:intron 25.0%
!! TAATATGCACTTTCTTTTAG+TGG + chr3_4:66818346-66818365 Msa0515560:intron 25.0%
!!! AATATGCTATAATGGATTGA+AGG - chr3_4:66818813-66818832 None:intergenic 25.0%
! GTATATTCTCTTCATTATTC+AGG + chr3_4:66819012-66819031 Msa0515560:intron 25.0%
! TTATTCAGGAAGTTTAATTG+TGG + chr3_4:66819026-66819045 Msa0515560:intron 25.0%
! AATCAGACTAATCAACTAAA+AGG - chr3_4:66819208-66819227 None:intergenic 25.0%
!!! AGATTTTCTAAAATGTTGTG+AGG + chr3_4:66819287-66819306 Msa0515560:intron 25.0%
!! TACTGTCTTTTAATGTCAAA+TGG + chr3_4:66819370-66819389 Msa0515560:intron 25.0%
! GAAGCATAATATTGGAAATA+TGG + chr3_4:66819392-66819411 Msa0515560:intron 25.0%
! AATATTGGAAATATGGAAGA+TGG + chr3_4:66819399-66819418 Msa0515560:intron 25.0%
! TTCGACTGTTATAAAAAAAG+TGG - chr3_4:66819491-66819510 None:intergenic 25.0%
!!! GAAACATTGTTATTCCATTT+TGG + chr3_4:66819508-66819527 Msa0515560:intron 25.0%
!!! TAACGATTTTGAGTTTTACT+AGG + chr3_4:66819559-66819578 Msa0515560:intron 25.0%
! AATACAACTAGTCCTTTAAA+TGG - chr3_4:66819913-66819932 None:intergenic 25.0%
! AATACAACTAGTCCTTTAAA+TGG - chr3_4:66819913-66819932 None:intergenic 25.0%
! CTTGACTGAAACAAAAATTA+CGG + chr3_4:66820210-66820229 Msa0515560:intron 25.0%
! TCTATAAGCATTTATCGTTT+AGG - chr3_4:66820482-66820501 None:intergenic 25.0%
! ATACAAAGACACAATAATTC+AGG - chr3_4:66820683-66820702 None:intergenic 25.0%
!! TACTTTTATCCCTTTATAGA+TGG + chr3_4:66820887-66820906 Msa0515560:intron 25.0%
! TTCTTGCATTAATTTCAAAC+AGG + chr3_4:66820936-66820955 Msa0515560:intron 25.0%
! TATGATATGAAAACAAGGAA+AGG + chr3_4:66820963-66820982 Msa0515560:CDS 25.0%
! AAAATAAATTACCAGGTAGT+TGG - chr3_4:66821051-66821070 None:intergenic 25.0%
! AGAATAGCACATAAAAAAGT+AGG - chr3_4:66821189-66821208 None:intergenic 25.0%
! AAAAAAACTTGAGCTTATGT+GGG + chr3_4:66821662-66821681 Msa0515560:intron 25.0%
! GAAAGAACAGAACAATAATT+TGG + chr3_4:66821735-66821754 Msa0515560:intron 25.0%
! TATCTTAAATTTGCAGAAAG+TGG + chr3_4:66821911-66821930 Msa0515560:intron 25.0%
! ATCTTAAATTTGCAGAAAGT+GGG + chr3_4:66821912-66821931 Msa0515560:intron 25.0%
! TATCTTAAATTTGCAGAAAG+TGG + chr3_4:66821911-66821930 Msa0515560:intron 25.0%
! ATCTTAAATTTGCAGAAAGT+GGG + chr3_4:66821912-66821931 Msa0515560:intron 25.0%
! TAGTAATTTATGAAAATGCC+CGG + chr3_4:66822210-66822229 Msa0515560:intron 25.0%
! ATATGTGTGCTTATCATAAT+TGG + chr3_4:66822470-66822489 Msa0515560:intron 25.0%
! GAATAAAATTTCATTGTTGC+AGG + chr3_4:66822492-66822511 Msa0515560:intron 25.0%
!!! TGTTTCGTTTGTTTAACTTT+TGG + chr3_4:66822791-66822810 Msa0515560:three_prime_UTR 25.0%
!! AACTAGTAGAGCTTTTTCTA+TGG - chr3_4:66815469-66815488 None:intergenic 30.0%
TAGAAAAAGCTCTACTAGTT+AGG + chr3_4:66815469-66815488 Msa0515560:five_prime_UTR 30.0%
AGAAAAAGCTCTACTAGTTA+GGG + chr3_4:66815470-66815489 Msa0515560:five_prime_UTR 30.0%
TAGTTAGGGTTTAATAACCA+TGG + chr3_4:66815484-66815503 Msa0515560:exon 30.0%
ATAAACCCTAGAAATGAAAG+GGG - chr3_4:66815697-66815716 None:intergenic 30.0%
GATAAACCCTAGAAATGAAA+GGG - chr3_4:66815698-66815717 None:intergenic 30.0%
TGATAAACCCTAGAAATGAA+AGG - chr3_4:66815699-66815718 None:intergenic 30.0%
! TCTAGGGTTTATCATTTCTT+CGG + chr3_4:66815705-66815724 Msa0515560:intron 30.0%
! TTTTGTGACTGCATAATAGA+TGG + chr3_4:66816033-66816052 Msa0515560:intron 30.0%
TTAAATCGAAGCACATTTCA+CGG - chr3_4:66816160-66816179 None:intergenic 30.0%
! TTTGAAATGAACCATTGTGA+TGG + chr3_4:66816343-66816362 Msa0515560:intron 30.0%
TTGAAATGAACCATTGTGAT+GGG + chr3_4:66816344-66816363 Msa0515560:intron 30.0%
! AGTTCTTTTGGCATTTTCAT+TGG + chr3_4:66816419-66816438 Msa0515560:intron 30.0%
! ATGAACAAGTGTGCATATTT+TGG - chr3_4:66816447-66816466 None:intergenic 30.0%
!!! GTTAGTTTTACTTGCTAACA+AGG - chr3_4:66816488-66816507 None:intergenic 30.0%
! ATGTTTTCACAAAGTAAACG+GGG + chr3_4:66816535-66816554 Msa0515560:intron 30.0%
TCTATCTTCTTTCTGAATAC+CGG + chr3_4:66816630-66816649 Msa0515560:intron 30.0%
TTTCTGAATACCGGATAATT+CGG + chr3_4:66816639-66816658 Msa0515560:intron 30.0%
ATAAAAATGCCCGAATTATC+CGG - chr3_4:66816652-66816671 None:intergenic 30.0%
!! AGTGTTGATATCAGCTTAAA+GGG - chr3_4:66816690-66816709 None:intergenic 30.0%
!! AAGTGTTGATATCAGCTTAA+AGG - chr3_4:66816691-66816710 None:intergenic 30.0%
ATCATGTCTGAAAATTGACA+TGG - chr3_4:66816758-66816777 None:intergenic 30.0%
! ATGTCAATTTTCAGACATGA+TGG + chr3_4:66816757-66816776 Msa0515560:intron 30.0%
!! AGAAATATACAAAGAGCACT+AGG + chr3_4:66817143-66817162 Msa0515560:CDS 30.0%
AACATGTTATCAATGCTGAA+AGG + chr3_4:66817275-66817294 Msa0515560:CDS 30.0%
GCCTAACTCGTTTAATAAAT+GGG + chr3_4:66817532-66817551 Msa0515560:intron 30.0%
ACCCATTTATTAAACGAGTT+AGG - chr3_4:66817536-66817555 None:intergenic 30.0%
CCTGGCCTAATTAAATTAAT+AGG - chr3_4:66817581-66817600 None:intergenic 30.0%
CCTATTAATTTAATTAGGCC+AGG + chr3_4:66817578-66817597 Msa0515560:intron 30.0%
TAATATACTAGTATACCGAC+CGG - chr3_4:66817640-66817659 None:intergenic 30.0%
ATTGTGGTATGAGAATTTGA+AGG - chr3_4:66817715-66817734 None:intergenic 30.0%
!!! CAAAGGCTTTATTTTAAGTC+TGG - chr3_4:66818086-66818105 None:intergenic 30.0%
CTTAAAATAAAGCCTTTGAC+AGG + chr3_4:66818088-66818107 Msa0515560:intron 30.0%
ATACTATGATGTGTAATAGG+AGG + chr3_4:66818425-66818444 Msa0515560:intron 30.0%
TACTATGATGTGTAATAGGA+GGG + chr3_4:66818426-66818445 Msa0515560:intron 30.0%
!!! GTGGGTATTTTTTATTAACG+CGG + chr3_4:66818718-66818737 Msa0515560:intron 30.0%
!!! TGGGTATTTTTTATTAACGC+GGG + chr3_4:66818719-66818738 Msa0515560:intron 30.0%
!!! ATTTTTTATTAACGCGGGTA+TGG + chr3_4:66818724-66818743 Msa0515560:intron 30.0%
!!! TTTTTTATTAACGCGGGTAT+GGG + chr3_4:66818725-66818744 Msa0515560:intron 30.0%
!! TATAATGGATTGAAGGCAAA+GGG - chr3_4:66818806-66818825 None:intergenic 30.0%
TATTATCGAGTGTCCTTAAA+TGG + chr3_4:66818832-66818851 Msa0515560:intron 30.0%
AGTAAAACTGCAACCATTTA+AGG - chr3_4:66818848-66818867 None:intergenic 30.0%
! GTCAAATGGAAGCATAATAT+TGG + chr3_4:66819384-66819403 Msa0515560:intron 30.0%
!!! TTGTTATTCCATTTTGGGAT+TGG + chr3_4:66819514-66819533 Msa0515560:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG + chr3_4:66819758-66819777 Msa0515560:intron 30.0%
! TCTTGTCTGAAACAAAAATC+AGG + chr3_4:66819849-66819868 Msa0515560:intron 30.0%
! CTTGTCTGAAACAAAAATCA+GGG + chr3_4:66819850-66819869 Msa0515560:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG + chr3_4:66819758-66819777 Msa0515560:intron 30.0%
! TCTTGTCTGAAACAAAAATC+AGG + chr3_4:66819849-66819868 Msa0515560:intron 30.0%
! CTTGTCTGAAACAAAAATCA+GGG + chr3_4:66819850-66819869 Msa0515560:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG + chr3_4:66819758-66819777 Msa0515560:intron 30.0%
! GGAGAATCAAACTATTTTGT+GGG + chr3_4:66819759-66819778 Msa0515560:intron 30.0%
ATACTAAAACTGAGTAGTAC+TGG - chr3_4:66820153-66820172 None:intergenic 30.0%
! AAGTTTGATTGTTTCTTGCA+TGG + chr3_4:66820595-66820614 Msa0515560:intron 30.0%
TTCAGAACAGCTCTTAAATA+TGG + chr3_4:66820635-66820654 Msa0515560:intron 30.0%
! TATTTTGCAGTCAACTCATA+TGG + chr3_4:66820736-66820755 Msa0515560:intron 30.0%
ATTTCCAGTGCAAAGATAAA+CGG - chr3_4:66820786-66820805 None:intergenic 30.0%
GATATTTGCTCAATGTCTTT+GGG - chr3_4:66820815-66820834 None:intergenic 30.0%
AGATATTTGCTCAATGTCTT+TGG - chr3_4:66820816-66820835 None:intergenic 30.0%
ACATTGAGCAAATATCTTAC+TGG + chr3_4:66820819-66820838 Msa0515560:CDS 30.0%
TTGATGAAAGACATGTTTGT+CGG - chr3_4:66821225-66821244 None:intergenic 30.0%
CTTGTTAATTGAGCGAATTA+GGG - chr3_4:66821395-66821414 None:intergenic 30.0%
TCTTGTTAATTGAGCGAATT+AGG - chr3_4:66821396-66821415 None:intergenic 30.0%
TTAGGCTATGAAAGGAAAAT+AGG + chr3_4:66821484-66821503 Msa0515560:intron 30.0%
! AGGCCTTTAAATAAGCTTTT+AGG + chr3_4:66821530-66821549 Msa0515560:intron 30.0%
AGGACATAAATACCTATCTT+AGG + chr3_4:66821610-66821629 Msa0515560:intron 30.0%
ACCTATCTTAGGTAACAAAT+CGG + chr3_4:66821621-66821640 Msa0515560:intron 30.0%
!!! TCAAGTTTTTTTGCAAGTGT+TGG - chr3_4:66821654-66821673 None:intergenic 30.0%
CAAAAAAACTTGAGCTTATG+TGG + chr3_4:66821661-66821680 Msa0515560:intron 30.0%
ATGATTGTGGTTGTTCAAAA+AGG - chr3_4:66821715-66821734 None:intergenic 30.0%
TGATATCCAGTTGCATAAAA+CGG - chr3_4:66821822-66821841 None:intergenic 30.0%
TGGATATCAGATTCTTAAAC+CGG + chr3_4:66821833-66821852 Msa0515560:intron 30.0%
TGGATATCAGATTCTTAAAC+CGG + chr3_4:66821833-66821852 Msa0515560:intron 30.0%
TAGATACTAGATATGTAGCA+TGG + chr3_4:66822182-66822201 Msa0515560:intron 30.0%
TCATAAACATGGATCAATGA+TGG + chr3_4:66822420-66822439 Msa0515560:intron 30.0%
! AACGATTTTACACCAGTATT+AGG - chr3_4:66822743-66822762 None:intergenic 30.0%
AATACTGGTGTAAAATCGTT+TGG + chr3_4:66822743-66822762 Msa0515560:three_prime_UTR 30.0%
TAAAATTGAACCGAGAGAAA+TGG + chr3_4:66822831-66822850 Msa0515560:three_prime_UTR 30.0%
AAAATTGAACCGAGAGAAAT+GGG + chr3_4:66822832-66822851 Msa0515560:three_prime_UTR 30.0%
TTAGGGTTTAATAACCATGG+CGG + chr3_4:66815487-66815506 Msa0515560:exon 35.0%
TAACTTCCCCTTTCATTTCT+AGG + chr3_4:66815688-66815707 Msa0515560:intron 35.0%
AACTTCCCCTTTCATTTCTA+GGG + chr3_4:66815689-66815708 Msa0515560:intron 35.0%
! TTCCTAACTTCCTTTTGTGT+GGG + chr3_4:66815994-66816013 Msa0515560:intron 35.0%
! ACAAGGAAAGCATGGATAAA+TGG - chr3_4:66816219-66816238 None:intergenic 35.0%
AAAGTTGAACAAGGAAAGCA+TGG - chr3_4:66816227-66816246 None:intergenic 35.0%
TGAAATGAACCATTGTGATG+GGG + chr3_4:66816345-66816364 Msa0515560:intron 35.0%
TTCTGAATACCGGATAATTC+GGG + chr3_4:66816640-66816659 Msa0515560:intron 35.0%
! GTGTTGATATCAGCTTAAAG+GGG - chr3_4:66816689-66816708 None:intergenic 35.0%
TGAAAATTGACATGGACATG+AGG - chr3_4:66816750-66816769 None:intergenic 35.0%
! AACAAGACCAGTTTTACAGA+GGG - chr3_4:66816973-66816992 None:intergenic 35.0%
! TAACAAGACCAGTTTTACAG+AGG - chr3_4:66816974-66816993 None:intergenic 35.0%
AGTGTTATAGGTCAAGAAAC+TGG - chr3_4:66817096-66817115 None:intergenic 35.0%
AAACCCAATCCCAAAAATAC+GGG - chr3_4:66817428-66817447 None:intergenic 35.0%
CAAACCCAATCCCAAAAATA+CGG - chr3_4:66817429-66817448 None:intergenic 35.0%
!!! GTATTTTTGGGATTGGGTTT+GGG + chr3_4:66817428-66817447 Msa0515560:intron 35.0%
GGCCTAACTCGTTTAATAAA+TGG + chr3_4:66817531-66817550 Msa0515560:intron 35.0%
AATTTAATTAGGCCAGGCTT+AGG + chr3_4:66817584-66817603 Msa0515560:intron 35.0%
!!! CTTTTTTATAAGCCTAAGCC+TGG - chr3_4:66817599-66817618 None:intergenic 35.0%
AGTACGTTGCACAAATTGAA+AGG + chr3_4:66817963-66817982 Msa0515560:intron 35.0%
! CACAAACTAGGCTTTTAAAC+AGG + chr3_4:66818025-66818044 Msa0515560:intron 35.0%
! AGGCTTTTAAACAGGCTAAT+AGG + chr3_4:66818033-66818052 Msa0515560:intron 35.0%
!! GCCAGACCAAACTTTTAAAA+AGG + chr3_4:66818055-66818074 Msa0515560:intron 35.0%
!! GCCTTTTTAAAAGTTTGGTC+TGG - chr3_4:66818059-66818078 None:intergenic 35.0%
!! ACCAAACTTTTAAAAAGGCC+AGG + chr3_4:66818060-66818079 Msa0515560:intron 35.0%
TAAAGCCTTTGACAGGTAAA+AGG + chr3_4:66818095-66818114 Msa0515560:intron 35.0%
AAAAACTAAGGCCTAAGTCT+TGG - chr3_4:66818121-66818140 None:intergenic 35.0%
!!! AGGCCTTAGTTTTTTCAACT+AGG + chr3_4:66818127-66818146 Msa0515560:intron 35.0%
AGGCCTAGTTGAAAAAACTA+AGG - chr3_4:66818133-66818152 None:intergenic 35.0%
TAGCCTATTTAAGCAAAGCT+CGG + chr3_4:66818152-66818171 Msa0515560:intron 35.0%
AGTGTAGTCTATATAGTGTG+CGG - chr3_4:66818267-66818286 None:intergenic 35.0%
ACTATGATGTGTAATAGGAG+GGG + chr3_4:66818427-66818446 Msa0515560:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG - chr3_4:66818523-66818542 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG + chr3_4:66818522-66818541 Msa0515560:intron 35.0%
! TTTTTATTAACGCGGGTATG+GGG + chr3_4:66818726-66818745 Msa0515560:intron 35.0%
!! CTATAATGGATTGAAGGCAA+AGG - chr3_4:66818807-66818826 None:intergenic 35.0%
GATGCAAACTTCTCGTATTA+TGG - chr3_4:66818938-66818957 None:intergenic 35.0%
! AAGTTTAATTGTGGCTTGCA+TGG + chr3_4:66819035-66819054 Msa0515560:intron 35.0%
CTAAAATGTTGTGAGGATTG+AGG + chr3_4:66819294-66819313 Msa0515560:intron 35.0%
TGTACCACACTATCACTTAA+TGG - chr3_4:66819322-66819341 None:intergenic 35.0%
AAGACAGTATGTGATTCACA+TGG - chr3_4:66819359-66819378 None:intergenic 35.0%
CAAGAAGTGAGACATTTCAA+AGG - chr3_4:66819445-66819464 None:intergenic 35.0%
!! CTTTGAAATGTCTCACTTCT+TGG + chr3_4:66819443-66819462 Msa0515560:intron 35.0%
TAGCAATGGTGATATGAGAA+AGG + chr3_4:66819623-66819642 Msa0515560:CDS 35.0%
!! AAAGGCACTGAATATTCTTC+AGG + chr3_4:66819641-66819660 Msa0515560:CDS 35.0%
! AGGAGTAGTTGTATTTGTTG+TGG + chr3_4:66819738-66819757 Msa0515560:intron 35.0%
TCGAGACAACATCCATTTAA+AGG + chr3_4:66819898-66819917 Msa0515560:intron 35.0%
!! AGGACTAGTTGTATTTGTTG+TGG + chr3_4:66819918-66819937 Msa0515560:intron 35.0%
TCGAGACAACATCCATTTAA+AGG + chr3_4:66819898-66819917 Msa0515560:intron 35.0%
!! AGGACTAGTTGTATTTGTTG+TGG + chr3_4:66819918-66819937 Msa0515560:intron 35.0%
TTACGGTAGCTAGATATACA+TGG + chr3_4:66820227-66820246 Msa0515560:intron 35.0%
TATATCCTGAATTCGGTACA+TGG + chr3_4:66820406-66820425 Msa0515560:intron 35.0%
AGAAAAATTGCGCTCAGATT+TGG - chr3_4:66820573-66820592 None:intergenic 35.0%
TATGAAAACAAGGAAAGGAC+TGG + chr3_4:66820968-66820987 Msa0515560:CDS 35.0%
!! TTACACTTTGTTGTTGTCAC+AGG + chr3_4:66821082-66821101 Msa0515560:intron 35.0%
TGATGAAAGACATGTTTGTC+GGG - chr3_4:66821224-66821243 None:intergenic 35.0%
AGAAAGTGGTATCTTATTGC+TGG + chr3_4:66821294-66821313 Msa0515560:intron 35.0%
GAAAGTGGTATCTTATTGCT+GGG + chr3_4:66821295-66821314 Msa0515560:intron 35.0%
ACAAGATAGATTGCACTCTA+AGG + chr3_4:66821410-66821429 Msa0515560:intron 35.0%
TAGCCTAATAAGAGTCAGTT+GGG - chr3_4:66821472-66821491 None:intergenic 35.0%
ATAGCCTAATAAGAGTCAGT+TGG - chr3_4:66821473-66821492 None:intergenic 35.0%
GACTCTTATTAGGCTATGAA+AGG + chr3_4:66821476-66821495 Msa0515560:intron 35.0%
TAAAGGCCTTACATATGTAC+AGG - chr3_4:66821519-66821538 None:intergenic 35.0%
AAGTCAATCTGTTACTGCTT+TGG + chr3_4:66821555-66821574 Msa0515560:intron 35.0%
ATTTATGTCCTTTCCAGTTG+AGG - chr3_4:66821601-66821620 None:intergenic 35.0%
CCTATCTTAGGTAACAAATC+GGG + chr3_4:66821622-66821641 Msa0515560:intron 35.0%
TATGTGGGCGATGTTTAAAT+TGG + chr3_4:66821677-66821696 Msa0515560:intron 35.0%
TGGTTGTTCAAAAAGGAATC+AGG - chr3_4:66821708-66821727 None:intergenic 35.0%
GTTCTGTTCTTTCATGATTG+TGG - chr3_4:66821728-66821747 None:intergenic 35.0%
ATATCCAGTTGCATAAAACG+GGG - chr3_4:66821820-66821839 None:intergenic 35.0%
GATATCCAGTTGCATAAAAC+GGG - chr3_4:66821821-66821840 None:intergenic 35.0%
TAGTTGTACTGCATGCAATA+TGG + chr3_4:66822064-66822083 Msa0515560:intron 35.0%
CTAAGAACCAGAAAGAAAAC+AGG - chr3_4:66822446-66822465 None:intergenic 35.0%
! TGCAGGTACAGATTAAGTTT+TGG + chr3_4:66822509-66822528 Msa0515560:intron 35.0%
! GCAGGTACAGATTAAGTTTT+GGG + chr3_4:66822510-66822529 Msa0515560:intron 35.0%
TAACCTTCACCTGAATATGA+TGG + chr3_4:66822611-66822630 Msa0515560:exon 35.0%
! TATCTCGGTGCACATAAATT+AGG - chr3_4:66822674-66822693 None:intergenic 35.0%
GATGTACAACGGAAATATCT+CGG - chr3_4:66822689-66822708 None:intergenic 35.0%
AAATTGAACCGAGAGAAATG+GGG + chr3_4:66822833-66822852 Msa0515560:three_prime_UTR 35.0%
ATGAAAGGGGAAGTTAGAGA+GGG - chr3_4:66815684-66815703 None:intergenic 40.0%
AATGAAAGGGGAAGTTAGAG+AGG - chr3_4:66815685-66815704 None:intergenic 40.0%
TAAAACATCGACGATTCTCG+CGG + chr3_4:66815830-66815849 Msa0515560:CDS 40.0%
CTGAATGCTTCAGATGATAG+AGG + chr3_4:66815900-66815919 Msa0515560:CDS 40.0%
AGCACTCAGAGTCTATCATT+TGG + chr3_4:66815960-66815979 Msa0515560:CDS 40.0%
GCACTCAGAGTCTATCATTT+GGG + chr3_4:66815961-66815980 Msa0515560:CDS 40.0%
! CTTCCTAACTTCCTTTTGTG+TGG + chr3_4:66815993-66816012 Msa0515560:intron 40.0%
CAGTAAAACACCCACACAAA+AGG - chr3_4:66816007-66816026 None:intergenic 40.0%
TTATCTTCTCCCCATCACAA+TGG - chr3_4:66816357-66816376 None:intergenic 40.0%
TATCATTCCATCAGCCAATG+CGG + chr3_4:66816597-66816616 Msa0515560:intron 40.0%
TAGATATAGAACCTCCGCAT+TGG - chr3_4:66816614-66816633 None:intergenic 40.0%
AAAGCACATGCAAGCAGAAA+GGG - chr3_4:66816824-66816843 None:intergenic 40.0%
! AAAAGCACATGCAAGCAGAA+AGG - chr3_4:66816825-66816844 None:intergenic 40.0%
! TGCTTGCATGTGCTTTTGAT+TGG + chr3_4:66816828-66816847 Msa0515560:intron 40.0%
!! GCTTGCATGTGCTTTTGATT+GGG + chr3_4:66816829-66816848 Msa0515560:intron 40.0%
AAATTGGGCATCCTTAGTCA+TGG - chr3_4:66817010-66817029 None:intergenic 40.0%
ACCTCTACGTAACGCAAATT+GGG - chr3_4:66817025-66817044 None:intergenic 40.0%
TTGAGCTACATTCTCACGAT+GGG + chr3_4:66817392-66817411 Msa0515560:intron 40.0%
! GGGTAAACACCCGTATTTTT+GGG + chr3_4:66817416-66817435 Msa0515560:intron 40.0%
!!! AACACCCGTATTTTTGGGAT+TGG + chr3_4:66817421-66817440 Msa0515560:intron 40.0%
!!! ACACCCGTATTTTTGGGATT+GGG + chr3_4:66817422-66817441 Msa0515560:intron 40.0%
!!! CGTATTTTTGGGATTGGGTT+TGG + chr3_4:66817427-66817446 Msa0515560:intron 40.0%
TTGGGTAATTACCCGCAAAT+AGG + chr3_4:66817446-66817465 Msa0515560:intron 40.0%
TGGGTAATTACCCGCAAATA+GGG + chr3_4:66817447-66817466 Msa0515560:intron 40.0%
! GCTTGCTACTAATATGCCTA+AGG + chr3_4:66817794-66817813 Msa0515560:intron 40.0%
!! GCCTGGCCTTTTTAAAAGTT+TGG - chr3_4:66818064-66818083 None:intergenic 40.0%
!!! GCTTTATTTTAAGTCTGGCC+TGG - chr3_4:66818081-66818100 None:intergenic 40.0%
GAGCTTTGCTTAAATAGGCT+AGG - chr3_4:66818153-66818172 None:intergenic 40.0%
TATTTAAGCAAAGCTCGGCT+CGG + chr3_4:66818157-66818176 Msa0515560:intron 40.0%
CCATTCAAATTTGCGAGTAG+GGG - chr3_4:66818198-66818217 None:intergenic 40.0%
CCCATTCAAATTTGCGAGTA+GGG - chr3_4:66818199-66818218 None:intergenic 40.0%
CCCTACTCGCAAATTTGAAT+GGG + chr3_4:66818196-66818215 Msa0515560:intron 40.0%
ACCCATTCAAATTTGCGAGT+AGG - chr3_4:66818200-66818219 None:intergenic 40.0%
AAATTTGAATGGGTGTGGTG+CGG + chr3_4:66818206-66818225 Msa0515560:intron 40.0%
GTGTAGTCTATATAGTGTGC+GGG - chr3_4:66818266-66818285 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG + chr3_4:66818472-66818491 Msa0515560:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG + chr3_4:66818516-66818535 Msa0515560:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG + chr3_4:66818517-66818536 Msa0515560:intron 40.0%
CGTACAATACACCAAATGGT+GGG + chr3_4:66818548-66818567 Msa0515560:intron 40.0%
CATAGTAAAAAAGGGCAACC+CGG - chr3_4:66818614-66818633 None:intergenic 40.0%
! GGAACCATTAAGTGATAGTG+TGG + chr3_4:66819315-66819334 Msa0515560:intron 40.0%
GATGGTAATACATGCTGATC+TGG + chr3_4:66819417-66819436 Msa0515560:intron 40.0%
GCAAGTTACCAATCCCAAAA+TGG - chr3_4:66819525-66819544 None:intergenic 40.0%
!! CAGGGAAGCTTGTTATAACA+TGG + chr3_4:66819868-66819887 Msa0515560:intron 40.0%
!! CAGGGAAGCTTGTTATAACA+TGG + chr3_4:66819868-66819887 Msa0515560:intron 40.0%
!! ATTAGCACACTTGTTGACTC+AGG - chr3_4:66820259-66820278 None:intergenic 40.0%
TAAGACCATGTACCGAATTC+AGG - chr3_4:66820414-66820433 None:intergenic 40.0%
TTCTTCAGTAATCTGCTGAG+AGG - chr3_4:66820762-66820781 None:intergenic 40.0%
TTACCAGGTAGTTGGATGTT+AGG - chr3_4:66821043-66821062 None:intergenic 40.0%
!! AGTGCAGTTGGTGAATGATT+TGG + chr3_4:66821140-66821159 Msa0515560:CDS 40.0%
TTTGTAAGGCTGAGAGAAAG+TGG + chr3_4:66821280-66821299 Msa0515560:intron 40.0%
GTATCTTATTGCTGGGAACA+GGG + chr3_4:66821302-66821321 Msa0515560:intron 40.0%
! AATTAGGGCCTTTTGGCATT+GGG - chr3_4:66821380-66821399 None:intergenic 40.0%
AGTTGGGTAGTTAGAAAGCA+AGG - chr3_4:66821456-66821475 None:intergenic 40.0%
! CTACCCAACTGACTCTTATT+AGG + chr3_4:66821466-66821485 Msa0515560:intron 40.0%
!! CCCGATTTGTTACCTAAGAT+AGG - chr3_4:66821625-66821644 None:intergenic 40.0%
TTAGGTAACAAATCGGGCTA+TGG + chr3_4:66821628-66821647 Msa0515560:intron 40.0%
TATCCAGTTGCATAAAACGG+GGG - chr3_4:66821819-66821838 None:intergenic 40.0%
ACAGCTACGTATACATGTAC+CGG - chr3_4:66821855-66821874 None:intergenic 40.0%
ACAGCTACGTATACATGTAC+CGG - chr3_4:66821855-66821874 None:intergenic 40.0%
AGGTGTACAAATGGTCATTC+AGG - chr3_4:66822126-66822145 None:intergenic 40.0%
CACACAAGTAGGTGTACAAA+TGG - chr3_4:66822135-66822154 None:intergenic 40.0%
AGGGGATATGTCTATATTCC+GGG - chr3_4:66822231-66822250 None:intergenic 40.0%
CAGGGGATATGTCTATATTC+CGG - chr3_4:66822232-66822251 None:intergenic 40.0%
GTCAGATGAAGCCAAATTTC+AGG - chr3_4:66822326-66822345 None:intergenic 40.0%
TCTAGCACATACATAACGAC+TGG - chr3_4:66822348-66822367 None:intergenic 40.0%
! ATGATGGCCTGTTTTCTTTC+TGG + chr3_4:66822436-66822455 Msa0515560:intron 40.0%
ATCAGTGCACCATCATATTC+AGG - chr3_4:66822623-66822642 None:intergenic 40.0%
TTTCCGTTGTACATCGTAGA+AGG + chr3_4:66822694-66822713 Msa0515560:three_prime_UTR 40.0%
!! AGGGAAGACTGTGTTTTGAG+CGG + chr3_4:66815350-66815369 Msa0515560:five_prime_UTR 45.0%
TCTGTGAAGTCGATGTCCAT+AGG - chr3_4:66815524-66815543 None:intergenic 45.0%
!! GACATCGACTTCACAGACAA+GGG + chr3_4:66815527-66815546 Msa0515560:CDS 45.0%
TTACCCCATCTGCTGTTGTA+TGG + chr3_4:66815792-66815811 Msa0515560:CDS 45.0%
AGGACCATACAACAGCAGAT+GGG - chr3_4:66815799-66815818 None:intergenic 45.0%
CACCCACACAAAAGGAAGTT+AGG - chr3_4:66815999-66816018 None:intergenic 45.0%
TCGAAGCACATTTCACGGTA+TGG - chr3_4:66816155-66816174 None:intergenic 45.0%
CGCTAATTACTGCTGAACTC+TGG - chr3_4:66816561-66816580 None:intergenic 45.0%
GAGTTCAGCAGTAATTAGCG+TGG + chr3_4:66816561-66816580 Msa0515560:intron 45.0%
CGTCAAACCCTCTGTAAAAC+TGG + chr3_4:66816963-66816982 Msa0515560:CDS 45.0%
TGAAGCAGATGCCATGACTA+AGG + chr3_4:66816996-66817015 Msa0515560:CDS 45.0%
CACCTCTACGTAACGCAAAT+TGG - chr3_4:66817026-66817045 None:intergenic 45.0%
TGCATCTTGATTGCAGTGCT+GGG - chr3_4:66817204-66817223 None:intergenic 45.0%
AATCAAGATGCACCCGGTTT+CGG + chr3_4:66817212-66817231 Msa0515560:CDS 45.0%
TGACATGGACAGCATCAAGA+GGG - chr3_4:66817243-66817262 None:intergenic 45.0%
GTTTCAGTCTCTCAGTGACA+TGG - chr3_4:66817258-66817277 None:intergenic 45.0%
GTTGAGCTACATTCTCACGA+TGG + chr3_4:66817391-66817410 Msa0515560:intron 45.0%
! CGGGTAAACACCCGTATTTT+TGG + chr3_4:66817415-66817434 Msa0515560:intron 45.0%
GGGTAATTACCCGCAAATAG+GGG + chr3_4:66817448-66817467 Msa0515560:intron 45.0%
TAATTACCCGCAAATAGGGG+TGG + chr3_4:66817451-66817470 Msa0515560:intron 45.0%
AATTACCCGCAAATAGGGGT+GGG + chr3_4:66817452-66817471 Msa0515560:intron 45.0%
AAAAGCCTATCAAGCCTACC+AGG + chr3_4:66817614-66817633 Msa0515560:intron 45.0%
!! CTTGGCCTTTTACCTGTCAA+AGG - chr3_4:66818103-66818122 None:intergenic 45.0%
CAGGTAAAAGGCCAAGACTT+AGG + chr3_4:66818107-66818126 Msa0515560:intron 45.0%
GAGCCGAGCTTTGCTTAAAT+AGG - chr3_4:66818158-66818177 None:intergenic 45.0%
TCAAATTTGCGAGTAGGGGT+GGG - chr3_4:66818194-66818213 None:intergenic 45.0%
TTCAAATTTGCGAGTAGGGG+TGG - chr3_4:66818195-66818214 None:intergenic 45.0%
CCCCTACTCGCAAATTTGAA+TGG + chr3_4:66818195-66818214 Msa0515560:intron 45.0%
CTCGCAAATTTGAATGGGTG+TGG + chr3_4:66818201-66818220 Msa0515560:intron 45.0%
AATTTGAATGGGTGTGGTGC+GGG + chr3_4:66818207-66818226 Msa0515560:intron 45.0%
TGTAATAGGAGGGGTAACCT+TGG + chr3_4:66818436-66818455 Msa0515560:intron 45.0%
CAACTTTACCAGTTGAGCCA+AGG - chr3_4:66818456-66818475 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG + chr3_4:66818478-66818497 Msa0515560:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG + chr3_4:66818479-66818498 Msa0515560:intron 45.0%
GCTGCGTACAATACACCAAA+TGG + chr3_4:66818544-66818563 Msa0515560:intron 45.0%
GCGTACAATACACCAAATGG+TGG + chr3_4:66818547-66818566 Msa0515560:intron 45.0%
TAGTAAGTACCCTGCCGAAA+GGG + chr3_4:66818759-66818778 Msa0515560:intron 45.0%
AAGGCAAAGGGATCTGTATG+TGG - chr3_4:66818794-66818813 None:intergenic 45.0%
TGCATGTGCATTTCAACTGC+TGG + chr3_4:66819154-66819173 Msa0515560:intron 45.0%
AGGCTTGATGTTCAAGACAG+TGG + chr3_4:66819579-66819598 Msa0515560:intron 45.0%
GTGGCTTATCTGCTCTTGTT+CGG + chr3_4:66819598-66819617 Msa0515560:CDS 45.0%
! GGCACTGAATATTCTTCAGG+TGG + chr3_4:66819644-66819663 Msa0515560:intron 45.0%
TGTGTGAATGCAAGCGAAAG+GGG - chr3_4:66819821-66819840 None:intergenic 45.0%
GTGTGTGAATGCAAGCGAAA+GGG - chr3_4:66819822-66819841 None:intergenic 45.0%
TGTGTGTGAATGCAAGCGAA+AGG - chr3_4:66819823-66819842 None:intergenic 45.0%
TCGCTTGCATTCACACACAA+TGG + chr3_4:66819824-66819843 Msa0515560:intron 45.0%
TGTGTGAATGCAAGCGAAAG+GGG - chr3_4:66819821-66819840 None:intergenic 45.0%
GTGTGTGAATGCAAGCGAAA+GGG - chr3_4:66819822-66819841 None:intergenic 45.0%
TGTGTGTGAATGCAAGCGAA+AGG - chr3_4:66819823-66819842 None:intergenic 45.0%
TCGCTTGCATTCACACACAA+TGG + chr3_4:66819824-66819843 Msa0515560:intron 45.0%
TGTGTCAATGCACACGACAT+GGG - chr3_4:66820181-66820200 None:intergenic 45.0%
! TCGTGTGCATTGACACACTT+CGG + chr3_4:66820184-66820203 Msa0515560:intron 45.0%
GAAGCCGTTTATCTTTGCAC+TGG + chr3_4:66820779-66820798 Msa0515560:CDS 45.0%
CATCCTAACATCCAACTACC+TGG + chr3_4:66821037-66821056 Msa0515560:intron 45.0%
ATTCACCAACTGCACTCGAA+CGG - chr3_4:66821136-66821155 None:intergenic 45.0%
TGTTTGTCGGGTCAAGCATA+AGG - chr3_4:66821212-66821231 None:intergenic 45.0%
GGTATCTTATTGCTGGGAAC+AGG + chr3_4:66821301-66821320 Msa0515560:intron 45.0%
! TCCACGCTGACTACAAACAA+TGG + chr3_4:66821330-66821349 Msa0515560:intron 45.0%
! GAATTAGGGCCTTTTGGCAT+TGG - chr3_4:66821381-66821400 None:intergenic 45.0%
! TTGAGCGAATTAGGGCCTTT+TGG - chr3_4:66821387-66821406 None:intergenic 45.0%
! CAAGGCATGTTGCTTAAGAG+GGG - chr3_4:66821438-66821457 None:intergenic 45.0%
! GCAAGGCATGTTGCTTAAGA+GGG - chr3_4:66821439-66821458 None:intergenic 45.0%
! AGCAAGGCATGTTGCTTAAG+AGG - chr3_4:66821440-66821459 None:intergenic 45.0%
GAAAGGAAAATAGGCTCCTC+AGG + chr3_4:66821493-66821512 Msa0515560:intron 45.0%
CTTACATATGTACAGGCCTG+AGG - chr3_4:66821512-66821531 None:intergenic 45.0%
CTCAGGCCTGTACATATGTA+AGG + chr3_4:66821510-66821529 Msa0515560:intron 45.0%
ATCCAGTTGCATAAAACGGG+GGG - chr3_4:66821818-66821837 None:intergenic 45.0%
GAACGACAAAGCACACAAGT+AGG - chr3_4:66822146-66822165 None:intergenic 45.0%
! ATTAAGTCTGAAGTGGGGTG+AGG - chr3_4:66822263-66822282 None:intergenic 45.0%
! GGGACATTAAGTCTGAAGTG+GGG - chr3_4:66822268-66822287 None:intergenic 45.0%
! CGGGACATTAAGTCTGAAGT+GGG - chr3_4:66822269-66822288 None:intergenic 45.0%
ACGGGACATTAAGTCTGAAG+TGG - chr3_4:66822270-66822289 None:intergenic 45.0%
GAAGCCAAATTTCAGGCACT+CGG - chr3_4:66822319-66822338 None:intergenic 45.0%
TGCAACGATAAGCTTCAGCT+TGG + chr3_4:66822533-66822552 Msa0515560:CDS 45.0%
TACACGTGCTAGATCTGCAA+TGG + chr3_4:66822574-66822593 Msa0515560:CDS 45.0%
GCACCATCATATTCAGGTGA+AGG - chr3_4:66822617-66822636 None:intergenic 45.0%
CCTCCTTCTACGATGTACAA+CGG - chr3_4:66822700-66822719 None:intergenic 45.0%
! TGGTGCTAACAGCCTAATAC+TGG + chr3_4:66822728-66822747 Msa0515560:three_prime_UTR 45.0%
! GGTTATGTTGACTGCTCTGA+TGG + chr3_4:66822764-66822783 Msa0515560:three_prime_UTR 45.0%
!! ATAATAATAACAATAATAAA+TGG - chr3_4:66820539-66820558 None:intergenic 5.0%
!! GGGAAGACTGTGTTTTGAGC+GGG + chr3_4:66815351-66815370 Msa0515560:five_prime_UTR 50.0%
GGGTTTAATAACCATGGCGG+AGG + chr3_4:66815490-66815509 Msa0515560:exon 50.0%
!! GGACATCGACTTCACAGACA+AGG + chr3_4:66815526-66815545 Msa0515560:CDS 50.0%
AAGCTTTGCCACCGAAGGAA+GGG - chr3_4:66815577-66815596 None:intergenic 50.0%
! TACTTGTGTCGACGATGTCG+CGG - chr3_4:66815652-66815671 None:intergenic 50.0%
GGGGAAGTTAGAGAGGGAAA+GGG - chr3_4:66815678-66815697 None:intergenic 50.0%
AGGGGAAGTTAGAGAGGGAA+AGG - chr3_4:66815679-66815698 None:intergenic 50.0%
GGACCATACAACAGCAGATG+GGG - chr3_4:66815798-66815817 None:intergenic 50.0%
GAGGACCATACAACAGCAGA+TGG - chr3_4:66815800-66815819 None:intergenic 50.0%
GTTGTATGGTCCTCCTGGAA+CGG + chr3_4:66815806-66815825 Msa0515560:CDS 50.0%
TTGTATGGTCCTCCTGGAAC+GGG + chr3_4:66815807-66815826 Msa0515560:CDS 50.0%
! GATGTTTTACCCGTTCCAGG+AGG - chr3_4:66815819-66815838 None:intergenic 50.0%
! GTCGATGTTTTACCCGTTCC+AGG - chr3_4:66815822-66815841 None:intergenic 50.0%
GCGGTGGCGCGAAAATTATA+CGG + chr3_4:66815849-66815868 Msa0515560:CDS 50.0%
GCCCAATTTGCGTTACGTAG+AGG + chr3_4:66817021-66817040 Msa0515560:CDS 50.0%
GTGCATCTTGATTGCAGTGC+TGG - chr3_4:66817205-66817224 None:intergenic 50.0%
CACTGCAATCAAGATGCACC+CGG + chr3_4:66817206-66817225 Msa0515560:CDS 50.0%
GACATGGACAGCATCAAGAG+GGG - chr3_4:66817242-66817261 None:intergenic 50.0%
GTGACATGGACAGCATCAAG+AGG - chr3_4:66817244-66817263 None:intergenic 50.0%
AGCTACATTCTCACGATGGG+CGG + chr3_4:66817395-66817414 Msa0515560:intron 50.0%
CTATTCCCACCCCTATTTGC+GGG - chr3_4:66817460-66817479 None:intergenic 50.0%
CCTATTCCCACCCCTATTTG+CGG - chr3_4:66817461-66817480 None:intergenic 50.0%
! CTTTTAGTAGGCCGAGCCAT+AGG - chr3_4:66817503-66817522 None:intergenic 50.0%
! TCTATATAGTGTGCGGGCTG+CGG - chr3_4:66818260-66818279 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCT+TGG + chr3_4:66818491-66818510 Msa0515560:intron 50.0%
CTGAAGCTCCCGCATATGTA+GGG - chr3_4:66818587-66818606 None:intergenic 50.0%
ACTGAAGCTCCCGCATATGT+AGG - chr3_4:66818588-66818607 None:intergenic 50.0%
TATTAACGCGGGTATGGGGA+TGG + chr3_4:66818730-66818749 Msa0515560:intron 50.0%
ATTAACGCGGGTATGGGGAT+GGG + chr3_4:66818731-66818750 Msa0515560:intron 50.0%
GTAGTAAGTACCCTGCCGAA+AGG + chr3_4:66818758-66818777 Msa0515560:intron 50.0%
AGGGATCTGTATGTGGCACA+GGG - chr3_4:66818787-66818806 None:intergenic 50.0%
AAGGGATCTGTATGTGGCAC+AGG - chr3_4:66818788-66818807 None:intergenic 50.0%
GCTCTTGTTCGGCTTAGCAA+TGG + chr3_4:66819609-66819628 Msa0515560:CDS 50.0%
GTGTGAATGCAAGCGAAAGG+GGG - chr3_4:66819820-66819839 None:intergenic 50.0%
GTGTGAATGCAAGCGAAAGG+GGG - chr3_4:66819820-66819839 None:intergenic 50.0%
GTGTCAATGCACACGACATG+GGG - chr3_4:66820180-66820199 None:intergenic 50.0%
GTGTGTCAATGCACACGACA+TGG - chr3_4:66820182-66820201 None:intergenic 50.0%
TGCTCAATGTCTTTGGGCAG+TGG - chr3_4:66820809-66820828 None:intergenic 50.0%
GCCATTGTTTGTAGTCAGCG+TGG - chr3_4:66821334-66821353 None:intergenic 50.0%
TGAGTAGCCTGAACCTCAAC+TGG + chr3_4:66821585-66821604 Msa0515560:intron 50.0%
AGCCTGAACCTCAACTGGAA+AGG + chr3_4:66821590-66821609 Msa0515560:intron 50.0%
GTCCTTTCCAGTTGAGGTTC+AGG - chr3_4:66821595-66821614 None:intergenic 50.0%
TCCAGTTGCATAAAACGGGG+GGG - chr3_4:66821817-66821836 None:intergenic 50.0%
GGGAAGAGCTACTATGCAAC+TGG + chr3_4:66821932-66821951 Msa0515560:intron 50.0%
TTTGTCGTTCTCACGCGTCT+AGG + chr3_4:66822156-66822175 Msa0515560:intron 50.0%
TGGGGTGAGGAGAAAGAACA+GGG - chr3_4:66822250-66822269 None:intergenic 50.0%
AAAGAAGGACGACGCTGCAA+CGG - chr3_4:66822289-66822308 None:intergenic 50.0%
! AGCGTCGTCCTTCTTTTCAG+TGG + chr3_4:66822293-66822312 Msa0515560:intron 50.0%
CCGTTGTACATCGTAGAAGG+AGG + chr3_4:66822697-66822716 Msa0515560:three_prime_UTR 50.0%
!! ACATCGTAGAAGGAGGCATC+AGG + chr3_4:66822704-66822723 Msa0515560:three_prime_UTR 50.0%
AGGATAAGTCTCCTCCGCCA+TGG - chr3_4:66815504-66815523 None:intergenic 55.0%
GGCGGAGGAGACTTATCCTA+TGG + chr3_4:66815505-66815524 Msa0515560:CDS 55.0%
GAAGCTTTGCCACCGAAGGA+AGG - chr3_4:66815578-66815597 None:intergenic 55.0%
TAGCGAAGCTTTGCCACCGA+AGG - chr3_4:66815582-66815601 None:intergenic 55.0%
TCGGTGGCAAAGCTTCGCTA+TGG + chr3_4:66815582-66815601 Msa0515560:CDS 55.0%
CGGTGGCAAAGCTTCGCTAT+GGG + chr3_4:66815583-66815602 Msa0515560:CDS 55.0%
GCAACATCGTCGAGGGATTG+AGG - chr3_4:66815623-66815642 None:intergenic 55.0%
GTGAGCTGCAACATCGTCGA+GGG - chr3_4:66815630-66815649 None:intergenic 55.0%
CTGCTGTTGTATGGTCCTCC+TGG + chr3_4:66815801-66815820 Msa0515560:CDS 55.0%
AACATCGACGATTCTCGCGG+TGG + chr3_4:66815833-66815852 Msa0515560:CDS 55.0%
CATTCCATCAGCCAATGCGG+AGG + chr3_4:66816600-66816619 Msa0515560:intron 55.0%
!! AGAACCTCCGCATTGGCTGA+TGG - chr3_4:66816607-66816626 None:intergenic 55.0%
AAGAGGGGCAAACCGAAACC+GGG - chr3_4:66817227-66817246 None:intergenic 55.0%
CAAGAGGGGCAAACCGAAAC+CGG - chr3_4:66817228-66817247 None:intergenic 55.0%
GCTACATTCTCACGATGGGC+GGG + chr3_4:66817396-66817415 Msa0515560:intron 55.0%
CCGCAAATAGGGGTGGGAAT+AGG + chr3_4:66817458-66817477 Msa0515560:intron 55.0%
AATAGGGGTGGGAATAGGCC+AGG + chr3_4:66817463-66817482 Msa0515560:intron 55.0%
GGCTCGGCCTACTAAAAGCT+CGG + chr3_4:66817505-66817524 Msa0515560:intron 55.0%
GGCCTACTAAAAGCTCGGCT+CGG + chr3_4:66817510-66817529 Msa0515560:intron 55.0%
TACTAGTATACCGACCGGCC+TGG - chr3_4:66817635-66817654 None:intergenic 55.0%
! TATATAGTGTGCGGGCTGCG+GGG - chr3_4:66818258-66818277 None:intergenic 55.0%
! CTATATAGTGTGCGGGCTGC+GGG - chr3_4:66818259-66818278 None:intergenic 55.0%
AGGGGTAACCTTGGCTCAAC+TGG + chr3_4:66818445-66818464 Msa0515560:intron 55.0%
CATATGTAGGGTCCGGGAAG+GGG - chr3_4:66818575-66818594 None:intergenic 55.0%
GCATATGTAGGGTCCGGGAA+GGG - chr3_4:66818576-66818595 None:intergenic 55.0%
CTTCCCGGACCCTACATATG+CGG + chr3_4:66818575-66818594 Msa0515560:intron 55.0%
TTCCCGGACCCTACATATGC+GGG + chr3_4:66818576-66818595 Msa0515560:intron 55.0%
! TGTGGCACAGGGTACCCTTT+CGG - chr3_4:66818776-66818795 None:intergenic 55.0%
GCCTACCTCCCAATGCCAAA+AGG + chr3_4:66821369-66821388 Msa0515560:intron 55.0%
!! GCCTTTTGGCATTGGGAGGT+AGG - chr3_4:66821373-66821392 None:intergenic 55.0%
!! TAGGGCCTTTTGGCATTGGG+AGG - chr3_4:66821377-66821396 None:intergenic 55.0%
AGTTGCATAAAACGGGGGGG+GGG - chr3_4:66821814-66821833 None:intergenic 55.0%
CAGTTGCATAAAACGGGGGG+GGG - chr3_4:66821815-66821834 None:intergenic 55.0%
CCAGTTGCATAAAACGGGGG+GGG - chr3_4:66821816-66821835 None:intergenic 55.0%
GGGGTGAGGAGAAAGAACAG+GGG - chr3_4:66822249-66822268 None:intergenic 55.0%
GTGGGGTGAGGAGAAAGAAC+AGG - chr3_4:66822251-66822270 None:intergenic 55.0%
AAGAAGGACGACGCTGCAAC+GGG - chr3_4:66822288-66822307 None:intergenic 55.0%
GCACTCGGCCACTGAAAAGA+AGG - chr3_4:66822304-66822323 None:intergenic 55.0%
GTGGCCGAGTGCCTGAAATT+TGG + chr3_4:66822312-66822331 Msa0515560:intron 55.0%
!! CGTAGAAGGAGGCATCAGGA+TGG + chr3_4:66822708-66822727 Msa0515560:three_prime_UTR 55.0%
GGCAAAACCGTCATTGCCGC+CGG + chr3_4:66815548-66815567 Msa0515560:CDS 60.0%
AGGGTTACCGGCGGCAATGA+CGG - chr3_4:66815558-66815577 None:intergenic 60.0%
ACCGAAGGAAGGGTTACCGG+CGG - chr3_4:66815567-66815586 None:intergenic 60.0%
GCCACCGAAGGAAGGGTTAC+CGG - chr3_4:66815570-66815589 None:intergenic 60.0%
GGTGAGCTGCAACATCGTCG+AGG - chr3_4:66815631-66815650 None:intergenic 60.0%
! GGCCGAGCCGAGCTTTTAGT+AGG - chr3_4:66817515-66817534 None:intergenic 60.0%
GCCTATCAAGCCTACCAGGC+CGG + chr3_4:66817618-66817637 Msa0515560:intron 60.0%
ACCGGCCTGGTAGGCTTGAT+AGG - chr3_4:66817622-66817641 None:intergenic 60.0%
ATCAAGCCTACCAGGCCGGT+CGG + chr3_4:66817622-66817641 Msa0515560:intron 60.0%
AGTATACCGACCGGCCTGGT+AGG - chr3_4:66817631-66817650 None:intergenic 60.0%
AGTAGGGGTGGGAATGAGCC+GGG - chr3_4:66818183-66818202 None:intergenic 60.0%
GAGTAGGGGTGGGAATGAGC+CGG - chr3_4:66818184-66818203 None:intergenic 60.0%
AATGGGTGTGGTGCGGGTGT+GGG + chr3_4:66818213-66818232 Msa0515560:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG + chr3_4:66818560-66818579 Msa0515560:intron 60.0%
CGCATATGTAGGGTCCGGGA+AGG - chr3_4:66818577-66818596 None:intergenic 60.0%
CTCCCGCATATGTAGGGTCC+GGG - chr3_4:66818581-66818600 None:intergenic 60.0%
GCTCCCGCATATGTAGGGTC+CGG - chr3_4:66818582-66818601 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG + chr3_4:66818592-66818611 Msa0515560:intron 60.0%
! CACAGGGTACCCTTTCGGCA+GGG - chr3_4:66818771-66818790 None:intergenic 60.0%
AACTGCACTCGAACGGCTGG+CGG - chr3_4:66821129-66821148 None:intergenic 60.0%
ACCAACTGCACTCGAACGGC+TGG - chr3_4:66821132-66821151 None:intergenic 60.0%
TTGCATAAAACGGGGGGGGG+GGG - chr3_4:66821812-66821831 None:intergenic 60.0%
GTTGCATAAAACGGGGGGGG+GGG - chr3_4:66821813-66821832 None:intergenic 60.0%
! CCCCCCCCGTTTTATGCAAC+TGG + chr3_4:66821813-66821832 Msa0515560:intron 60.0%
GCCGCCGGTAACCCTTCCTT+CGG + chr3_4:66815563-66815582 Msa0515560:CDS 65.0%
GCCGGTAACCCTTCCTTCGG+TGG + chr3_4:66815566-66815585 Msa0515560:CDS 65.0%
AATAGGCCAGGCCGCTCGTC+AGG + chr3_4:66817475-66817494 Msa0515560:intron 65.0%
ATAGGCCAGGCCGCTCGTCA+GGG + chr3_4:66817476-66817495 Msa0515560:intron 65.0%
AGCCATAGGCCCCTGACGAG+CGG - chr3_4:66817489-66817508 None:intergenic 65.0%
CTCGTCAGGGGCCTATGGCT+CGG + chr3_4:66817489-66817508 Msa0515560:intron 65.0%
!! AAGCAAAGCTCGGCTCGGCC+CGG + chr3_4:66818162-66818181 Msa0515560:intron 65.0%
GAATGGGTGTGGTGCGGGTG+TGG + chr3_4:66818212-66818231 Msa0515560:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG - chr3_4:66818562-66818581 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG + chr3_4:66818593-66818612 Msa0515560:intron 65.0%
! GCACAGGGTACCCTTTCGGC+AGG - chr3_4:66818772-66818791 None:intergenic 65.0%
GCCAGCCGTTCGAGTGCAGT+TGG + chr3_4:66821128-66821147 Msa0515560:CDS 65.0%
TGCATAAAACGGGGGGGGGG+GGG - chr3_4:66821811-66821830 None:intergenic 65.0%
TAGGCCAGGCCGCTCGTCAG+GGG + chr3_4:66817477-66817496 Msa0515560:intron 70.0%
! ATAGTGTGCGGGCTGCGGGG+CGG - chr3_4:66818255-66818274 None:intergenic 70.0%
ATAAAACGGGGGGGGGGGGG+GGG - chr3_4:66821808-66821827 None:intergenic 70.0%
CATAAAACGGGGGGGGGGGG+GGG - chr3_4:66821809-66821828 None:intergenic 70.0%
GCATAAAACGGGGGGGGGGG+GGG - chr3_4:66821810-66821829 None:intergenic 70.0%
TAGGCCCCTGACGAGCGGCC+TGG - chr3_4:66817484-66817503 None:intergenic 75.0%
GGCCGCTCGTCAGGGGCCTA+TGG + chr3_4:66817484-66817503 Msa0515560:intron 75.0%
TAAAACGGGGGGGGGGGGGG+GGG - chr3_4:66821807-66821826 None:intergenic 75.0%
!! TGCGGGCTGCGGGGCGGACT+GGG - chr3_4:66818249-66818268 None:intergenic 80.0%
! AAAACGGGGGGGGGGGGGGG+GGG - chr3_4:66821806-66821825 None:intergenic 80.0%
!! GTGCGGGCTGCGGGGCGGAC+TGG - chr3_4:66818250-66818269 None:intergenic 85.0%
! AAACGGGGGGGGGGGGGGGG+GGG - chr3_4:66821805-66821824 None:intergenic 85.0%
! AACGGGGGGGGGGGGGGGGG+GGG - chr3_4:66821804-66821823 None:intergenic 90.0%
Chromosome Type Strat End Strand Name
chr3_4 gene 66815337 66822860 66815337 ID=Msa0515560;Name=Msa0515560
chr3_4 mRNA 66815337 66822860 66815337 ID=Msa0515560-mRNA-1;Parent=Msa0515560;Name=Msa0515560-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|1|1|9|247|355
chr3_4 exon 66815337 66815668 66815337 ID=Msa0515560-mRNA-1:exon:17269;Parent=Msa0515560-mRNA-1
chr3_4 exon 66815766 66815982 66815766 ID=Msa0515560-mRNA-1:exon:17270;Parent=Msa0515560-mRNA-1
chr3_4 exon 66816963 66817042 66816963 ID=Msa0515560-mRNA-1:exon:17271;Parent=Msa0515560-mRNA-1
chr3_4 exon 66817137 66817296 66817137 ID=Msa0515560-mRNA-1:exon:17272;Parent=Msa0515560-mRNA-1
chr3_4 exon 66819581 66819662 66819581 ID=Msa0515560-mRNA-1:exon:17273;Parent=Msa0515560-mRNA-1
chr3_4 exon 66820746 66820875 66820746 ID=Msa0515560-mRNA-1:exon:17274;Parent=Msa0515560-mRNA-1
chr3_4 exon 66820958 66821021 66820958 ID=Msa0515560-mRNA-1:exon:17275;Parent=Msa0515560-mRNA-1
chr3_4 exon 66821104 66821172 66821104 ID=Msa0515560-mRNA-1:exon:17276;Parent=Msa0515560-mRNA-1
chr3_4 exon 66822514 66822860 66822514 ID=Msa0515560-mRNA-1:exon:17277;Parent=Msa0515560-mRNA-1
chr3_4 five_prime_UTR 66815337 66815502 66815337 ID=Msa0515560-mRNA-1:five_prime_utr;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66815503 66815668 66815503 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66815766 66815982 66815766 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66816963 66817042 66816963 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66817137 66817296 66817137 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66819581 66819662 66819581 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66820746 66820875 66820746 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66820958 66821021 66820958 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66821104 66821172 66821104 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 CDS 66822514 66822613 66822514 ID=Msa0515560-mRNA-1:cds;Parent=Msa0515560-mRNA-1
chr3_4 three_prime_UTR 66822614 66822860 66822614 ID=Msa0515560-mRNA-1:three_prime_utr;Parent=Msa0515560-mRNA-1
Gene Sequence

>Msa0515560

ATGGCGGAGGAGACTTATCCTATGGACATCGACTTCACAGACAAGGGCAAAACCGTCATTGCCGCCGGTAACCCTTCCTTCGGTGGCAAAGCTTCGCTATGGGTTGAAAAGTATCGTCCTCAATCCCTCGACGATGTTGCAGCTCACCGCGACATCGTCGACACAATTGATAGGTTGACTACTGAGAATAGATTACCCCATCTGCTGTTGTATGGTCCTCCTGGAACGGGTAAAACATCGACGATTCTCGCGGTGGCGCGAAAATTATACGGTGCTCAGTATCATAATATGATTTTGGAACTGAATGCTTCAGATGATAGAGGAATTGATGTAGTTAGACAGCAGATTCAAGATTTTGCTAGCACTCAGAGTCTATCATTTGGCGTCAAACCCTCTGTAAAACTGGTCTTGTTAGATGAAGCAGATGCCATGACTAAGGATGCCCAATTTGCGTTACGTAGAGTCATCGAGAAATATACAAAGAGCACTAGGTTTGCACTTATCTGTAATCATGTAAACAAGATTATCCCAGCACTGCAATCAAGATGCACCCGGTTTCGGTTTGCCCCTCTTGATGCTGTCCATGTCACTGAGAGACTGAAACATGTTATCAATGCTGAAAGGCTTGATGTTCAAGACAGTGGCTTATCTGCTCTTGTTCGGCTTAGCAATGGTGATATGAGAAAGGCACTGAATATTCTTCAGTCAACTCATATGGCCTCTCAGCAGATTACTGAAGAAGCCGTTTATCTTTGCACTGGAAATCCACTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAAAGCTTTAAAAGAATATATGATATGAAAACAAGGAAAGGACTGGCTCTGATTGATATCGTAAGAGAAGTGACAATGTTTGTCTTCAAGATTAACATGCCGCCAGCCGTTCGAGTGCAGTTGGTGAATGATTTGGCTGACATAGAGTACAGATTAAGTTTTGGGTGCAACGATAAGCTTCAGCTTGGATCAGTTGTTGCTACATTTACACGTGCTAGATCTGCAATGGTTGCAGCTGCTGCATAA

Protein sequence

>Msa0515560

MAEETYPMDIDFTDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDIVREVTMFVFKINMPPAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVATFTRARSAMVAAAA*