AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0374270


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374270 MtrunA17_Chr3g0124791 98.873 355 4 0 1 355 1 355 0.0 728
Msa0374270 MtrunA17_Chr4g0057341 37.346 324 192 4 34 353 17 333 3.08e-67 215
Msa0374270 MtrunA17_Chr3g0125031 47.368 209 104 2 34 236 11 219 1.11e-63 206
Msa0374270 MtrunA17_Chr6g0478631 24.370 357 227 6 33 353 2 351 2.37e-32 124
Msa0374270 MtrunA17_Chr6g0460841 24.496 347 219 6 33 343 2 341 2.54e-32 124
Msa0374270 MtrunA17_Chr3g0145801 21.493 335 217 12 2 304 394 714 1.28e-14 75.1
Msa0374270 MtrunA17_Chr5g0404521 21.484 256 167 6 33 264 413 658 7.21e-14 72.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0374270 AT1G77470.1 77.027 370 67 4 1 354 1 368 0.0 577
Msa0374270 AT1G63160.1 38.365 318 185 4 34 347 17 327 2.83e-67 215
Msa0374270 AT1G21690.1 38.671 331 183 6 34 350 11 335 5.20e-66 212
Msa0374270 AT1G21690.3 48.402 219 106 3 34 245 11 229 8.37e-66 212
Msa0374270 AT1G21690.4 38.485 330 178 6 34 350 11 328 2.29e-64 207
Msa0374270 AT1G21690.2 38.369 331 172 7 34 350 11 323 4.75e-64 207
Msa0374270 AT5G27740.1 26.705 352 205 8 33 343 2 341 8.03e-36 134
Msa0374270 AT1G14460.1 23.404 235 156 4 36 249 426 657 1.85e-11 66.2
Msa0374270 AT5G45720.2 22.026 227 159 5 34 245 345 568 3.86e-11 65.1
Msa0374270 AT5G45720.1 22.026 227 159 5 34 245 345 568 3.88e-11 65.1
Msa0374270 AT1G24290.1 31.739 230 129 11 36 249 105 322 4.62e-11 64.3
Msa0374270 AT2G02480.2 22.609 230 155 3 36 245 453 679 8.45e-11 63.9
Msa0374270 AT2G02480.1 22.609 230 155 3 36 245 453 679 8.45e-11 63.9

Find 100 sgRNAs with CRISPR-Local

Find 543 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CACCTCTACGTAACGCAAAT+TGG 0.189548 3_1:+73680067 None:intergenic
CCGAGAGAAATGGGGCTTAA+TGG 0.221849 3_1:-73674257 None:intergenic
AGATATTTGCTCAATGTCTT+TGG 0.248728 3_1:+73676276 None:intergenic
TGTTTCGTTTGTTTAACTTT+TGG 0.262447 3_1:-73674308 Msa0374270:three_prime_UTR
CAGTAACACACAAGATTGTT+AGG 0.277932 3_1:-73681760 None:intergenic
TATCTCGGTGCACATAAATT+AGG 0.293780 3_1:+73674428 None:intergenic
TCAGTATCATAATATGATTT+TGG 0.311016 3_1:-73681215 Msa0374270:CDS
ACATTGAGCAAATATCTTAC+TGG 0.344071 3_1:-73676270 Msa0374270:CDS
TGCAGGTACAGATTAAGTTT+TGG 0.348480 3_1:-73674590 Msa0374270:intron
TAAAATTGAACCGAGAGAAA+TGG 0.361007 3_1:-73674267 Msa0374270:three_prime_UTR
CGTCAAACCCTCTGTAAAAC+TGG 0.370275 3_1:-73680127 Msa0374270:CDS
AATCAAGATGCACCCGGTTT+CGG 0.378472 3_1:-73679878 Msa0374270:CDS
AAAATTGAACCGAGAGAAAT+GGG 0.378938 3_1:-73674266 Msa0374270:three_prime_UTR
GATATTTGCTCAATGTCTTT+GGG 0.389281 3_1:+73676277 None:intergenic
GTGCATCTTGATTGCAGTGC+TGG 0.392350 3_1:+73679888 None:intergenic
TTTCCGTTGTACATCGTAGA+AGG 0.393244 3_1:-73674405 Msa0374270:three_prime_UTR
CTGCTGTTGTATGGTCCTCC+TGG 0.395722 3_1:-73681289 Msa0374270:CDS
CAAGAGGGGCAAACCGAAAC+CGG 0.396956 3_1:+73679865 None:intergenic
AGCACTCAGAGTCTATCATT+TGG 0.402934 3_1:-73681130 Msa0374270:CDS
GCCACCGAAGGAAGGGTTAC+CGG 0.403122 3_1:+73681523 None:intergenic
ACCTCTACGTAACGCAAATT+GGG 0.410660 3_1:+73680068 None:intergenic
TGCTCAATGTCTTTGGGCAG+TGG 0.410840 3_1:+73676283 None:intergenic
GCACTCAGAGTCTATCATTT+GGG 0.412330 3_1:-73681129 Msa0374270:intron
AAAGGCACTGAATATTCTTC+AGG 0.412974 3_1:-73677448 Msa0374270:intron
AATACTGGTGTAAAATCGTT+TGG 0.419316 3_1:-73674356 Msa0374270:three_prime_UTR
GGTTATGTTGACTGCTCTGA+TGG 0.433944 3_1:-73674335 Msa0374270:three_prime_UTR
AGTGCAGTTGGTGAATGATT+TGG 0.434023 3_1:-73675949 Msa0374270:CDS
GTGGCTTATCTGCTCTTGTT+CGG 0.434803 3_1:-73677491 Msa0374270:CDS
TGGTGCTAACAGCCTAATAC+TGG 0.441635 3_1:-73674371 Msa0374270:three_prime_UTR
ACCAACTGCACTCGAACGGC+TGG 0.444902 3_1:+73675960 None:intergenic
TTGTATGGTCCTCCTGGAAC+GGG 0.453099 3_1:-73681283 Msa0374270:CDS
GCCGCCGGTAACCCTTCCTT+CGG 0.453827 3_1:-73681527 Msa0374270:CDS
ATCAGTGCACCATCATATTC+AGG 0.461846 3_1:+73674479 None:intergenic
TTTCAGTAAGAAAATAGAAA+TGG 0.470080 3_1:+73681682 None:intergenic
TTACCCCATCTGCTGTTGTA+TGG 0.471783 3_1:-73681298 Msa0374270:CDS
TCGGTGGCAAAGCTTCGCTA+TGG 0.473250 3_1:-73681508 Msa0374270:CDS
ATTTCCAGTGCAAAGATAAA+CGG 0.476730 3_1:+73676306 None:intergenic
CCATTAAGCCCCATTTCTCT+CGG 0.484721 3_1:+73674257 None:intergenic
ACATCGTAGAAGGAGGCATC+AGG 0.497206 3_1:-73674395 Msa0374270:three_prime_UTR
CGGTGGCAAAGCTTCGCTAT+GGG 0.498078 3_1:-73681507 Msa0374270:CDS
GAAGCCGTTTATCTTTGCAC+TGG 0.505763 3_1:-73676310 Msa0374270:CDS
GCAACATCGTCGAGGGATTG+AGG 0.509495 3_1:+73681470 None:intergenic
GGCGGAGGAGACTTATCCTA+TGG 0.511189 3_1:-73681585 Msa0374270:CDS
GTTGTATGGTCCTCCTGGAA+CGG 0.512128 3_1:-73681284 Msa0374270:CDS
GCGGTGGCGCGAAAATTATA+CGG 0.514722 3_1:-73681241 Msa0374270:CDS
CTGAATGCTTCAGATGATAG+AGG 0.516669 3_1:-73681190 Msa0374270:CDS
TGAAGCAGATGCCATGACTA+AGG 0.516889 3_1:-73680094 Msa0374270:CDS
GAAGCTTTGCCACCGAAGGA+AGG 0.543002 3_1:+73681515 None:intergenic
TGCATCTTGATTGCAGTGCT+GGG 0.544244 3_1:+73679889 None:intergenic
GCCGGTAACCCTTCCTTCGG+TGG 0.549196 3_1:-73681524 Msa0374270:CDS
AGTAACACACAAGATTGTTA+GGG 0.550275 3_1:-73681759 None:intergenic
GGCAAAACCGTCATTGCCGC+CGG 0.553759 3_1:-73681542 Msa0374270:CDS
GCTCTTGTTCGGCTTAGCAA+TGG 0.554174 3_1:-73677480 Msa0374270:CDS
GCCAGCCGTTCGAGTGCAGT+TGG 0.554697 3_1:-73675961 Msa0374270:CDS
TGCAACGATAAGCTTCAGCT+TGG 0.555547 3_1:-73674566 Msa0374270:CDS
AGGGTTACCGGCGGCAATGA+CGG 0.559162 3_1:+73681535 None:intergenic
GAGGACCATACAACAGCAGA+TGG 0.563295 3_1:+73681293 None:intergenic
GGGTTTAATAACCATGGCGG+AGG 0.566041 3_1:-73681600 Msa0374270:exon
TAGCAATGGTGATATGAGAA+AGG 0.575803 3_1:-73677466 Msa0374270:CDS
TACACGTGCTAGATCTGCAA+TGG 0.578841 3_1:-73674525 Msa0374270:CDS
TCTGTGAAGTCGATGTCCAT+AGG 0.581778 3_1:+73681569 None:intergenic
AAGCTTTGCCACCGAAGGAA+GGG 0.581985 3_1:+73681516 None:intergenic
AAGAGGGGCAAACCGAAACC+GGG 0.584016 3_1:+73679866 None:intergenic
TATGATATGAAAACAAGGAA+AGG 0.587538 3_1:-73676126 Msa0374270:CDS
TATGAAAACAAGGAAAGGAC+TGG 0.592837 3_1:-73676121 Msa0374270:CDS
AACTGCACTCGAACGGCTGG+CGG 0.597817 3_1:+73675963 None:intergenic
GTGAGCTGCAACATCGTCGA+GGG 0.599799 3_1:+73681463 None:intergenic
CACTGCAATCAAGATGCACC+CGG 0.601545 3_1:-73679884 Msa0374270:CDS
TAGCGAAGCTTTGCCACCGA+AGG 0.602957 3_1:+73681511 None:intergenic
GCACCATCATATTCAGGTGA+AGG 0.603300 3_1:+73674485 None:intergenic
ATTCACCAACTGCACTCGAA+CGG 0.603811 3_1:+73675956 None:intergenic
TGACATGGACAGCATCAAGA+GGG 0.608265 3_1:+73679850 None:intergenic
AAATTGGGCATCCTTAGTCA+TGG 0.619881 3_1:+73680083 None:intergenic
GCCCAATTTGCGTTACGTAG+AGG 0.621180 3_1:-73680069 Msa0374270:intron
AACATGTTATCAATGCTGAA+AGG 0.623395 3_1:-73679815 Msa0374270:intron
TAGTTAGGGTTTAATAACCA+TGG 0.624202 3_1:-73681606 Msa0374270:exon
AGGATAAGTCTCCTCCGCCA+TGG 0.624657 3_1:+73681589 None:intergenic
AGGACCATACAACAGCAGAT+GGG 0.625782 3_1:+73681294 None:intergenic
TACTTGTGTCGACGATGTCG+CGG 0.626145 3_1:+73681441 None:intergenic
GTTTCAGTCTCTCAGTGACA+TGG 0.627168 3_1:+73679835 None:intergenic
CCGTTGTACATCGTAGAAGG+AGG 0.629509 3_1:-73674402 Msa0374270:three_prime_UTR
TAACCTTCACCTGAATATGA+TGG 0.629737 3_1:-73674488 Msa0374270:three_prime_UTR
GGACCATACAACAGCAGATG+GGG 0.630103 3_1:+73681295 None:intergenic
GATGTACAACGGAAATATCT+CGG 0.630765 3_1:+73674413 None:intergenic
GACATCGACTTCACAGACAA+GGG 0.631926 3_1:-73681563 Msa0374270:CDS
GGACATCGACTTCACAGACA+AGG 0.636430 3_1:-73681564 Msa0374270:CDS
GTGACATGGACAGCATCAAG+AGG 0.637050 3_1:+73679849 None:intergenic
AGAAATATACAAAGAGCACT+AGG 0.637557 3_1:-73679947 Msa0374270:CDS
AGGCTTGATGTTCAAGACAG+TGG 0.638532 3_1:-73677510 Msa0374270:CDS
GAATATATGATATGAAAACA+AGG 0.653141 3_1:-73676131 Msa0374270:CDS
AACATCGACGATTCTCGCGG+TGG 0.654620 3_1:-73681257 Msa0374270:CDS
CGTAGAAGGAGGCATCAGGA+TGG 0.659068 3_1:-73674391 Msa0374270:three_prime_UTR
GGTGAGCTGCAACATCGTCG+AGG 0.664996 3_1:+73681462 None:intergenic
CCTCCTTCTACGATGTACAA+CGG 0.678119 3_1:+73674402 None:intergenic
GACATGGACAGCATCAAGAG+GGG 0.683891 3_1:+73679851 None:intergenic
ACCGAAGGAAGGGTTACCGG+CGG 0.687119 3_1:+73681526 None:intergenic
TAAAACATCGACGATTCTCG+CGG 0.694200 3_1:-73681260 Msa0374270:CDS
TTCTTCAGTAATCTGCTGAG+AGG 0.704249 3_1:+73676330 None:intergenic
AAATTGAACCGAGAGAAATG+GGG 0.746077 3_1:-73674265 Msa0374270:three_prime_UTR
TTAGGGTTTAATAACCATGG+CGG 0.752952 3_1:-73681603 Msa0374270:exon

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TATATATATATATATATATA+TGG + chr3_1:73676593-73676612 None:intergenic 0.0%
!! ATAAAAATATTTATTCTATC+TGG - chr3_1:73678041-73678060 Msa0374270:intron 10.0%
!! AAAAAAAAAAAAAAAACTCA+AGG + chr3_1:73679440-73679459 None:intergenic 10.0%
!!! ATTGTTATTATTATTTTAGT+TGG - chr3_1:73679469-73679488 Msa0374270:intron 10.0%
!! ATATATTATAACTATTTGTA+AGG - chr3_1:73680190-73680209 Msa0374270:intron 10.0%
! GGGGGGGGGGGGGGGGGGGG+CGG + chr3_1:73680725-73680744 None:intergenic 100.0%
! CGGGGGGGGGGGGGGGGGGG+GGG + chr3_1:73680728-73680747 None:intergenic 100.0%
!!! AAAAGTTTTTACAAAGTAAA+CGG + chr3_1:73675185-73675204 None:intergenic 15.0%
!! AAAAGCCTATTAATTTAATT+AGG - chr3_1:73676496-73676515 Msa0374270:intron 15.0%
!! TATATTTGTGTTAACTATTA+AGG - chr3_1:73676695-73676714 Msa0374270:intron 15.0%
!! ACAATTGTAAAATTTATAGA+TGG + chr3_1:73676818-73676837 None:intergenic 15.0%
!!! ATGTGTAATATTTTATAAGT+TGG - chr3_1:73677558-73677577 Msa0374270:intron 15.0%
!!! TTTTGTTATTTATTAAAGTG+TGG - chr3_1:73677623-73677642 Msa0374270:intron 15.0%
!!! TTTGTTATTTATTAAAGTGT+GGG - chr3_1:73677624-73677643 Msa0374270:intron 15.0%
!! TATAATATTAGTATAACTTG+TGG + chr3_1:73677985-73678004 None:intergenic 15.0%
!! ATAAGTATGATTTAATGATT+TGG + chr3_1:73678108-73678127 None:intergenic 15.0%
!! TTTGTAAATAAGAAAACTTA+AGG + chr3_1:73678603-73678622 None:intergenic 15.0%
!! TATATGAAGATATTAAGAAA+AGG + chr3_1:73678641-73678660 None:intergenic 15.0%
!! TTCTTAATATCTTCATATAA+AGG - chr3_1:73678642-73678661 Msa0374270:intron 15.0%
!! TAAATTATATATCCTGAATT+CGG - chr3_1:73679323-73679342 Msa0374270:intron 15.0%
!! TTAATGCAAGAATTATAAAA+TGG + chr3_1:73679852-73679871 None:intergenic 15.0%
!! TTTCAGTAAGAAAATAGAAA+TGG + chr3_1:73674334-73674353 None:intergenic 20.0%
!!! TCAGTATCATAATATGATTT+TGG - chr3_1:73674798-73674817 Msa0374270:intron 20.0%
!! AATTTCATTAAAGTTGAACA+AGG + chr3_1:73675159-73675178 None:intergenic 20.0%
!!! AAAGTTTTTACAAAGTAAAC+GGG + chr3_1:73675184-73675203 None:intergenic 20.0%
!! AGAAGATAAAATGTTAGTTA+GGG - chr3_1:73675291-73675310 Msa0374270:intron 20.0%
!!! GTAAAACTAACACAAATTTT+AGG - chr3_1:73675420-73675439 Msa0374270:intron 20.0%
!!! AAATGTTTTCACAAAGTAAA+CGG - chr3_1:73675456-73675475 Msa0374270:intron 20.0%
!! ATAAAAGTGAAACAAGAATT+TGG - chr3_1:73675785-73675804 Msa0374270:intron 20.0%
!! TAAAAGTGAAACAAGAATTT+GGG - chr3_1:73675786-73675805 Msa0374270:intron 20.0%
!! GTCATACAAAATAATAATTG+TGG + chr3_1:73676654-73676673 None:intergenic 20.0%
!! ACAATAAATATCAAAGACTT+AGG + chr3_1:73677251-73677270 None:intergenic 20.0%
!!! TACTTTAGATGCTTTTTATT+TGG - chr3_1:73677322-73677341 Msa0374270:intron 20.0%
!! TAAATACTATGATGTGTAAT+AGG - chr3_1:73677346-73677365 Msa0374270:intron 20.0%
!! TTACACATCATAGTAAAAAA+GGG + chr3_1:73677546-73677565 None:intergenic 20.0%
!! ATTACACATCATAGTAAAAA+AGG + chr3_1:73677547-73677566 None:intergenic 20.0%
!! TCGATAATAATATGCTATAA+TGG + chr3_1:73677745-73677764 None:intergenic 20.0%
!!! ATTTTTATAAACTTTTGAGC+AGG + chr3_1:73678029-73678048 None:intergenic 20.0%
!!! TTCTAGTTATTAAGTTACTA+AGG - chr3_1:73678180-73678199 Msa0374270:intron 20.0%
!!! AAACATTGTTATTCCATTTT+GGG - chr3_1:73678433-73678452 Msa0374270:intron 20.0%
!! AAAAGAAACACAAATTTACA+AGG + chr3_1:73679370-73679389 None:intergenic 20.0%
!!! AAAGCAAAAAAATGTCATTT+AGG + chr3_1:73679638-73679657 None:intergenic 20.0%
!! ATATCAAATCCATCTATAAA+GGG + chr3_1:73679823-73679842 None:intergenic 20.0%
!! AATATCAAATCCATCTATAA+AGG + chr3_1:73679824-73679843 None:intergenic 20.0%
!! GAATATATGATATGAAAACA+AGG - chr3_1:73679882-73679901 Msa0374270:CDS 20.0%
!! GATCAATAAAATAAATTACC+AGG + chr3_1:73679982-73680001 None:intergenic 20.0%
!! TAACCTAAAAGCTTATTTAA+AGG + chr3_1:73680460-73680479 None:intergenic 20.0%
!!! ATGAATTTTACTCATAAACA+TGG - chr3_1:73681323-73681342 Msa0374270:CDS 20.0%
!! TTTTTGTGTGTTTAGTTGAT+AGG - chr3_1:73674674-73674693 Msa0374270:intron 25.0%
! ACATGCAAATTTACTACATA+AGG + chr3_1:73675004-73675023 None:intergenic 25.0%
! AAATTTGCATGTCAAATTTG+AGG - chr3_1:73675012-73675031 Msa0374270:intron 25.0%
!!! TTTGACTTGATTTGTTGTTA+TGG - chr3_1:73675038-73675057 Msa0374270:intron 25.0%
!! ATTTAACTTTGTGTCGAATA+AGG - chr3_1:73675097-73675116 Msa0374270:intron 25.0%
! GAGAAGATAAAATGTTAGTT+AGG - chr3_1:73675290-73675309 Msa0374270:intron 25.0%
!! AATACTGAAAACAGTTCTTT+TGG - chr3_1:73675330-73675349 Msa0374270:intron 25.0%
!! AATGTTTTCACAAAGTAAAC+GGG - chr3_1:73675457-73675476 Msa0374270:intron 25.0%
! TAAACATTAAAGACGATACA+AGG - chr3_1:73675633-73675652 Msa0374270:intron 25.0%
!! TTTGATAGTTAGAAAAGTTG+AGG + chr3_1:73675848-73675867 None:intergenic 25.0%
!!! AAGAATATGAAGAGTGTTAT+AGG + chr3_1:73676031-73676050 None:intergenic 25.0%
! TAAGTAAGTAATAACAGACA+GGG + chr3_1:73676231-73676250 None:intergenic 25.0%
! ATAAGTAAGTAATAACAGAC+AGG + chr3_1:73676232-73676251 None:intergenic 25.0%
! CTAATAACTATATTGACCTT+AGG + chr3_1:73676736-73676755 None:intergenic 25.0%
! TGAAATTTGTAACACAAACT+AGG - chr3_1:73676937-73676956 Msa0374270:intron 25.0%
!! TAATATGCACTTTCTTTTAG+TGG - chr3_1:73677270-73677289 Msa0374270:intron 25.0%
!!! AATATGCTATAATGGATTGA+AGG + chr3_1:73677737-73677756 None:intergenic 25.0%
! GTATATTCTCTTCATTATTC+AGG - chr3_1:73677936-73677955 Msa0374270:intron 25.0%
! TTATTCAGGAAGTTTAATTG+TGG - chr3_1:73677950-73677969 Msa0374270:intron 25.0%
! AATCAGACTAATCAACTAAA+AGG + chr3_1:73678132-73678151 None:intergenic 25.0%
!!! AGATTTTCTAAAATGTTGTG+AGG - chr3_1:73678211-73678230 Msa0374270:intron 25.0%
!! TACTGTCTTTTAATGTCAAA+TGG - chr3_1:73678294-73678313 Msa0374270:intron 25.0%
! GAAGCATAATATTGGAAATA+TGG - chr3_1:73678316-73678335 Msa0374270:intron 25.0%
! AATATTGGAAATATGGAAGA+TGG - chr3_1:73678323-73678342 Msa0374270:intron 25.0%
! TTCGACTGTTATAAAAAAAG+TGG + chr3_1:73678415-73678434 None:intergenic 25.0%
!!! GAAACATTGTTATTCCATTT+TGG - chr3_1:73678432-73678451 Msa0374270:intron 25.0%
!!! TAACGATTTTGAGTTTTACT+AGG - chr3_1:73678483-73678502 Msa0374270:intron 25.0%
! AATACAACTAGTCCTTTAAA+TGG + chr3_1:73678837-73678856 None:intergenic 25.0%
! AATACAACTAGTCCTTTAAA+TGG + chr3_1:73678837-73678856 None:intergenic 25.0%
! CTTGACTGAAACAAAAATTA+CGG - chr3_1:73679134-73679153 Msa0374270:intron 25.0%
! TCTATAAGCATTTATCGTTT+AGG + chr3_1:73679406-73679425 None:intergenic 25.0%
! ATACAAAGACACAATAATTC+AGG + chr3_1:73679607-73679626 None:intergenic 25.0%
!! TACTTTTATCCCTTTATAGA+TGG - chr3_1:73679811-73679830 Msa0374270:intron 25.0%
! TTCTTGCATTAATTTCAAAC+AGG - chr3_1:73679860-73679879 Msa0374270:CDS 25.0%
! TATGATATGAAAACAAGGAA+AGG - chr3_1:73679887-73679906 Msa0374270:CDS 25.0%
! AAAATAAATTACCAGGTAGT+TGG + chr3_1:73679975-73679994 None:intergenic 25.0%
! AGAATAGCACATAAAAAAGT+AGG + chr3_1:73680113-73680132 None:intergenic 25.0%
! AAAAAAACTTGAGCTTATGT+GGG - chr3_1:73680586-73680605 Msa0374270:intron 25.0%
! GAAAGAACAGAACAATAATT+TGG - chr3_1:73680659-73680678 Msa0374270:intron 25.0%
! TATCTTAAATTTGCAGAAAG+TGG - chr3_1:73680825-73680844 Msa0374270:intron 25.0%
! ATCTTAAATTTGCAGAAAGT+GGG - chr3_1:73680826-73680845 Msa0374270:intron 25.0%
! TATCTTAAATTTGCAGAAAG+TGG - chr3_1:73680825-73680844 Msa0374270:intron 25.0%
! ATCTTAAATTTGCAGAAAGT+GGG - chr3_1:73680826-73680845 Msa0374270:intron 25.0%
! TAGTAATTTATGAAAATGCC+CGG - chr3_1:73681124-73681143 Msa0374270:intron 25.0%
! ATATGTGTGCTTATCATAAT+TGG - chr3_1:73681384-73681403 Msa0374270:intron 25.0%
! GAATAAAATTTCATTGTTGC+AGG - chr3_1:73681406-73681425 Msa0374270:intron 25.0%
!!! TGTTTCGTTTGTTTAACTTT+TGG - chr3_1:73681705-73681724 Msa0374270:five_prime_UTR 25.0%
!! AACTAGTAGAGCTTTTTCTA+TGG + chr3_1:73674392-73674411 None:intergenic 30.0%
TAGAAAAAGCTCTACTAGTT+AGG - chr3_1:73674392-73674411 Msa0374270:three_prime_UTR 30.0%
AGAAAAAGCTCTACTAGTTA+GGG - chr3_1:73674393-73674412 Msa0374270:three_prime_UTR 30.0%
TAGTTAGGGTTTAATAACCA+TGG - chr3_1:73674407-73674426 Msa0374270:three_prime_UTR 30.0%
ATAAACCCTAGAAATGAAAG+GGG + chr3_1:73674620-73674639 None:intergenic 30.0%
GATAAACCCTAGAAATGAAA+GGG + chr3_1:73674621-73674640 None:intergenic 30.0%
TGATAAACCCTAGAAATGAA+AGG + chr3_1:73674622-73674641 None:intergenic 30.0%
! TCTAGGGTTTATCATTTCTT+CGG - chr3_1:73674628-73674647 Msa0374270:intron 30.0%
! TTTTGTGACTGCATAATAGA+TGG - chr3_1:73674956-73674975 Msa0374270:intron 30.0%
TTAAATCGAAGCACATTTCA+CGG + chr3_1:73675083-73675102 None:intergenic 30.0%
! TTTGAAATGAACCATTGTGA+TGG - chr3_1:73675266-73675285 Msa0374270:intron 30.0%
TTGAAATGAACCATTGTGAT+GGG - chr3_1:73675267-73675286 Msa0374270:intron 30.0%
! AGTTCTTTTGGCATTTTCAT+TGG - chr3_1:73675342-73675361 Msa0374270:intron 30.0%
! ATGAACAAGTGTGCATATTT+TGG + chr3_1:73675370-73675389 None:intergenic 30.0%
!!! GTTAGTTTTACTTGCTAACA+AGG + chr3_1:73675411-73675430 None:intergenic 30.0%
! ATGTTTTCACAAAGTAAACG+GGG - chr3_1:73675458-73675477 Msa0374270:intron 30.0%
TCTATCTTCTTTCTGAATAC+CGG - chr3_1:73675553-73675572 Msa0374270:intron 30.0%
TTTCTGAATACCGGATAATT+CGG - chr3_1:73675562-73675581 Msa0374270:intron 30.0%
ATAAAAATGCCCGAATTATC+CGG + chr3_1:73675575-73675594 None:intergenic 30.0%
!! AGTGTTGATATCAGCTTAAA+GGG + chr3_1:73675613-73675632 None:intergenic 30.0%
!! AAGTGTTGATATCAGCTTAA+AGG + chr3_1:73675614-73675633 None:intergenic 30.0%
ATCATGTCTGAAAATTGACA+TGG + chr3_1:73675681-73675700 None:intergenic 30.0%
! ATGTCAATTTTCAGACATGA+TGG - chr3_1:73675680-73675699 Msa0374270:intron 30.0%
!! AGAAATATACAAAGAGCACT+AGG - chr3_1:73676066-73676085 Msa0374270:intron 30.0%
AACATGTTATCAATGCTGAA+AGG - chr3_1:73676198-73676217 Msa0374270:intron 30.0%
GCCTAACTCGTTTAATAAAT+GGG - chr3_1:73676455-73676474 Msa0374270:intron 30.0%
ACCCATTTATTAAACGAGTT+AGG + chr3_1:73676459-73676478 None:intergenic 30.0%
CCTGGCCTAATTAAATTAAT+AGG + chr3_1:73676504-73676523 None:intergenic 30.0%
CCTATTAATTTAATTAGGCC+AGG - chr3_1:73676501-73676520 Msa0374270:intron 30.0%
TAATATACTAGTATACCGAC+CGG + chr3_1:73676563-73676582 None:intergenic 30.0%
ATTGTGGTATGAGAATTTGA+AGG + chr3_1:73676638-73676657 None:intergenic 30.0%
!!! CAAAGGCTTTATTTTAAGTC+TGG + chr3_1:73677010-73677029 None:intergenic 30.0%
CTTAAAATAAAGCCTTTGAC+AGG - chr3_1:73677012-73677031 Msa0374270:intron 30.0%
ATACTATGATGTGTAATAGG+AGG - chr3_1:73677349-73677368 Msa0374270:intron 30.0%
TACTATGATGTGTAATAGGA+GGG - chr3_1:73677350-73677369 Msa0374270:intron 30.0%
!!! GTGGGTATTTTTTATTAACG+CGG - chr3_1:73677642-73677661 Msa0374270:intron 30.0%
!!! TGGGTATTTTTTATTAACGC+GGG - chr3_1:73677643-73677662 Msa0374270:intron 30.0%
!!! ATTTTTTATTAACGCGGGTA+TGG - chr3_1:73677648-73677667 Msa0374270:intron 30.0%
!!! TTTTTTATTAACGCGGGTAT+GGG - chr3_1:73677649-73677668 Msa0374270:intron 30.0%
!! TATAATGGATTGAAGGCAAA+GGG + chr3_1:73677730-73677749 None:intergenic 30.0%
TATTATCGAGTGTCCTTAAA+TGG - chr3_1:73677756-73677775 Msa0374270:intron 30.0%
AGTAAAACTGCAACCATTTA+AGG + chr3_1:73677772-73677791 None:intergenic 30.0%
! GTCAAATGGAAGCATAATAT+TGG - chr3_1:73678308-73678327 Msa0374270:intron 30.0%
!!! TTGTTATTCCATTTTGGGAT+TGG - chr3_1:73678438-73678457 Msa0374270:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG - chr3_1:73678682-73678701 Msa0374270:intron 30.0%
! TCTTGTCTGAAACAAAAATC+AGG - chr3_1:73678773-73678792 Msa0374270:intron 30.0%
! CTTGTCTGAAACAAAAATCA+GGG - chr3_1:73678774-73678793 Msa0374270:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG - chr3_1:73678682-73678701 Msa0374270:intron 30.0%
! TCTTGTCTGAAACAAAAATC+AGG - chr3_1:73678773-73678792 Msa0374270:intron 30.0%
! CTTGTCTGAAACAAAAATCA+GGG - chr3_1:73678774-73678793 Msa0374270:intron 30.0%
! TGGAGAATCAAACTATTTTG+TGG - chr3_1:73678682-73678701 Msa0374270:intron 30.0%
! GGAGAATCAAACTATTTTGT+GGG - chr3_1:73678683-73678702 Msa0374270:intron 30.0%
ATACTAAAACTGAGTAGTAC+TGG + chr3_1:73679077-73679096 None:intergenic 30.0%
! AAGTTTGATTGTTTCTTGCA+TGG - chr3_1:73679519-73679538 Msa0374270:intron 30.0%
TTCAGAACAGCTCTTAAATA+TGG - chr3_1:73679559-73679578 Msa0374270:intron 30.0%
! TATTTTGCAGTCAACTCATA+TGG - chr3_1:73679660-73679679 Msa0374270:intron 30.0%
ATTTCCAGTGCAAAGATAAA+CGG + chr3_1:73679710-73679729 None:intergenic 30.0%
GATATTTGCTCAATGTCTTT+GGG + chr3_1:73679739-73679758 None:intergenic 30.0%
AGATATTTGCTCAATGTCTT+TGG + chr3_1:73679740-73679759 None:intergenic 30.0%
ACATTGAGCAAATATCTTAC+TGG - chr3_1:73679743-73679762 Msa0374270:intron 30.0%
TTGATGAAAGACATGTTTGT+CGG + chr3_1:73680149-73680168 None:intergenic 30.0%
CTTGTTAATTGAGCGAATTA+GGG + chr3_1:73680319-73680338 None:intergenic 30.0%
TCTTGTTAATTGAGCGAATT+AGG + chr3_1:73680320-73680339 None:intergenic 30.0%
TTAGGCTATGAAAGGAAAAT+AGG - chr3_1:73680408-73680427 Msa0374270:intron 30.0%
! AGGCCTTTAAATAAGCTTTT+AGG - chr3_1:73680454-73680473 Msa0374270:intron 30.0%
AGGACATAAATACCTATCTT+AGG - chr3_1:73680534-73680553 Msa0374270:intron 30.0%
ACCTATCTTAGGTAACAAAT+CGG - chr3_1:73680545-73680564 Msa0374270:intron 30.0%
!!! TCAAGTTTTTTTGCAAGTGT+TGG + chr3_1:73680578-73680597 None:intergenic 30.0%
CAAAAAAACTTGAGCTTATG+TGG - chr3_1:73680585-73680604 Msa0374270:intron 30.0%
ATGATTGTGGTTGTTCAAAA+AGG + chr3_1:73680639-73680658 None:intergenic 30.0%
TGGATATCAGATTCTTAAAC+CGG - chr3_1:73680866-73680885 Msa0374270:intron 30.0%
TAGATACTAGATATGTAGCA+TGG - chr3_1:73681096-73681115 Msa0374270:intron 30.0%
TCATAAACATGGATCAATGA+TGG - chr3_1:73681334-73681353 Msa0374270:intron 30.0%
! AACGATTTTACACCAGTATT+AGG + chr3_1:73681657-73681676 None:intergenic 30.0%
AATACTGGTGTAAAATCGTT+TGG - chr3_1:73681657-73681676 Msa0374270:five_prime_UTR 30.0%
TAAAATTGAACCGAGAGAAA+TGG - chr3_1:73681746-73681765 Msa0374270:five_prime_UTR 30.0%
AAAATTGAACCGAGAGAAAT+GGG - chr3_1:73681747-73681766 Msa0374270:five_prime_UTR 30.0%
TTAGGGTTTAATAACCATGG+CGG - chr3_1:73674410-73674429 Msa0374270:three_prime_UTR 35.0%
TAACTTCCCCTTTCATTTCT+AGG - chr3_1:73674611-73674630 Msa0374270:intron 35.0%
AACTTCCCCTTTCATTTCTA+GGG - chr3_1:73674612-73674631 Msa0374270:intron 35.0%
! TTCCTAACTTCCTTTTGTGT+GGG - chr3_1:73674917-73674936 Msa0374270:intron 35.0%
! ACAAGGAAAGCATGGATAAA+TGG + chr3_1:73675142-73675161 None:intergenic 35.0%
AAAGTTGAACAAGGAAAGCA+TGG + chr3_1:73675150-73675169 None:intergenic 35.0%
TGAAATGAACCATTGTGATG+GGG - chr3_1:73675268-73675287 Msa0374270:intron 35.0%
TTCTGAATACCGGATAATTC+GGG - chr3_1:73675563-73675582 Msa0374270:intron 35.0%
! GTGTTGATATCAGCTTAAAG+GGG + chr3_1:73675612-73675631 None:intergenic 35.0%
TGAAAATTGACATGGACATG+AGG + chr3_1:73675673-73675692 None:intergenic 35.0%
! AACAAGACCAGTTTTACAGA+GGG + chr3_1:73675896-73675915 None:intergenic 35.0%
! TAACAAGACCAGTTTTACAG+AGG + chr3_1:73675897-73675916 None:intergenic 35.0%
AGTGTTATAGGTCAAGAAAC+TGG + chr3_1:73676019-73676038 None:intergenic 35.0%
AAACCCAATCCCAAAAATAC+GGG + chr3_1:73676351-73676370 None:intergenic 35.0%
CAAACCCAATCCCAAAAATA+CGG + chr3_1:73676352-73676371 None:intergenic 35.0%
!!! GTATTTTTGGGATTGGGTTT+GGG - chr3_1:73676351-73676370 Msa0374270:intron 35.0%
GGCCTAACTCGTTTAATAAA+TGG - chr3_1:73676454-73676473 Msa0374270:intron 35.0%
AATTTAATTAGGCCAGGCTT+AGG - chr3_1:73676507-73676526 Msa0374270:intron 35.0%
!!! CTTTTTTATAAGCCTAAGCC+TGG + chr3_1:73676522-73676541 None:intergenic 35.0%
AGTACGTTGCACAAATTGAA+AGG - chr3_1:73676886-73676905 Msa0374270:intron 35.0%
! CACAAACTAGGCTTTTAAAC+AGG - chr3_1:73676949-73676968 Msa0374270:intron 35.0%
! AGGCTTTTAAACAGGCTAAT+AGG - chr3_1:73676957-73676976 Msa0374270:intron 35.0%
!! GCCAGACCAAACTTTTAAAA+AGG - chr3_1:73676979-73676998 Msa0374270:intron 35.0%
!! GCCTTTTTAAAAGTTTGGTC+TGG + chr3_1:73676983-73677002 None:intergenic 35.0%
!! ACCAAACTTTTAAAAAGGCC+AGG - chr3_1:73676984-73677003 Msa0374270:intron 35.0%
TAAAGCCTTTGACAGGTAAA+AGG - chr3_1:73677019-73677038 Msa0374270:intron 35.0%
AAAAACTAAGGCCTAAGTCT+TGG + chr3_1:73677045-73677064 None:intergenic 35.0%
!!! AGGCCTTAGTTTTTTCAACT+AGG - chr3_1:73677051-73677070 Msa0374270:intron 35.0%
AGGCCTAGTTGAAAAAACTA+AGG + chr3_1:73677057-73677076 None:intergenic 35.0%
TAGCCTATTTAAGCAAAGCT+CGG - chr3_1:73677076-73677095 Msa0374270:intron 35.0%
AGTGTAGTCTATATAGTGTG+CGG + chr3_1:73677191-73677210 None:intergenic 35.0%
ACTATGATGTGTAATAGGAG+GGG - chr3_1:73677351-73677370 Msa0374270:intron 35.0%
!!! TTACCCTGTTTTTACACAAG+AGG + chr3_1:73677447-73677466 None:intergenic 35.0%
TCTTGTGTAAAAACAGGGTA+AGG - chr3_1:73677446-73677465 Msa0374270:intron 35.0%
! TTTTTATTAACGCGGGTATG+GGG - chr3_1:73677650-73677669 Msa0374270:intron 35.0%
!! CTATAATGGATTGAAGGCAA+AGG + chr3_1:73677731-73677750 None:intergenic 35.0%
GATGCAAACTTCTCGTATTA+TGG + chr3_1:73677862-73677881 None:intergenic 35.0%
! AAGTTTAATTGTGGCTTGCA+TGG - chr3_1:73677959-73677978 Msa0374270:intron 35.0%
CTAAAATGTTGTGAGGATTG+AGG - chr3_1:73678218-73678237 Msa0374270:intron 35.0%
TGTACCACACTATCACTTAA+TGG + chr3_1:73678246-73678265 None:intergenic 35.0%
AAGACAGTATGTGATTCACA+TGG + chr3_1:73678283-73678302 None:intergenic 35.0%
CAAGAAGTGAGACATTTCAA+AGG + chr3_1:73678369-73678388 None:intergenic 35.0%
!! CTTTGAAATGTCTCACTTCT+TGG - chr3_1:73678367-73678386 Msa0374270:intron 35.0%
TAGCAATGGTGATATGAGAA+AGG - chr3_1:73678547-73678566 Msa0374270:intron 35.0%
!! AAAGGCACTGAATATTCTTC+AGG - chr3_1:73678565-73678584 Msa0374270:intron 35.0%
! AGGAGTAGTTGTATTTGTTG+TGG - chr3_1:73678662-73678681 Msa0374270:intron 35.0%
TCGAGACAACATCCATTTAA+AGG - chr3_1:73678822-73678841 Msa0374270:intron 35.0%
!! AGGACTAGTTGTATTTGTTG+TGG - chr3_1:73678842-73678861 Msa0374270:intron 35.0%
TCGAGACAACATCCATTTAA+AGG - chr3_1:73678822-73678841 Msa0374270:intron 35.0%
!! AGGACTAGTTGTATTTGTTG+TGG - chr3_1:73678842-73678861 Msa0374270:intron 35.0%
TTACGGTAGCTAGATATACA+TGG - chr3_1:73679151-73679170 Msa0374270:intron 35.0%
TATATCCTGAATTCGGTACA+TGG - chr3_1:73679330-73679349 Msa0374270:intron 35.0%
AGAAAAATTGCGCTCAGATT+TGG + chr3_1:73679497-73679516 None:intergenic 35.0%
TATGAAAACAAGGAAAGGAC+TGG - chr3_1:73679892-73679911 Msa0374270:CDS 35.0%
!! TTACACTTTGTTGTTGTCAC+AGG - chr3_1:73680006-73680025 Msa0374270:intron 35.0%
TGATGAAAGACATGTTTGTC+GGG + chr3_1:73680148-73680167 None:intergenic 35.0%
AGAAAGTGGTATCTTATTGC+TGG - chr3_1:73680218-73680237 Msa0374270:intron 35.0%
GAAAGTGGTATCTTATTGCT+GGG - chr3_1:73680219-73680238 Msa0374270:intron 35.0%
ACAAGATAGATTGCACTCTA+AGG - chr3_1:73680334-73680353 Msa0374270:intron 35.0%
TAGCCTAATAAGAGTCAGTT+GGG + chr3_1:73680396-73680415 None:intergenic 35.0%
ATAGCCTAATAAGAGTCAGT+TGG + chr3_1:73680397-73680416 None:intergenic 35.0%
GACTCTTATTAGGCTATGAA+AGG - chr3_1:73680400-73680419 Msa0374270:intron 35.0%
TAAAGGCCTTACATATGTAC+AGG + chr3_1:73680443-73680462 None:intergenic 35.0%
AAGTCAATCTGTTACTGCTT+TGG - chr3_1:73680479-73680498 Msa0374270:intron 35.0%
ATTTATGTCCTTTCCAGTTG+AGG + chr3_1:73680525-73680544 None:intergenic 35.0%
CCTATCTTAGGTAACAAATC+GGG - chr3_1:73680546-73680565 Msa0374270:intron 35.0%
TATGTGGGCGATGTTTAAAT+TGG - chr3_1:73680601-73680620 Msa0374270:intron 35.0%
TGGTTGTTCAAAAAGGAATC+AGG + chr3_1:73680632-73680651 None:intergenic 35.0%
GTTCTGTTCTTTCATGATTG+TGG + chr3_1:73680652-73680671 None:intergenic 35.0%
TTTAAGAATCTGAAAACGGG+GGG + chr3_1:73680744-73680763 None:intergenic 35.0%
GTTTAAGAATCTGAAAACGG+GGG + chr3_1:73680745-73680764 None:intergenic 35.0%
GGTTTAAGAATCTGAAAACG+GGG + chr3_1:73680746-73680765 None:intergenic 35.0%
CGGTTTAAGAATCTGAAAAC+GGG + chr3_1:73680747-73680766 None:intergenic 35.0%
CCGGTTTAAGAATCTGAAAA+CGG + chr3_1:73680748-73680767 None:intergenic 35.0%
! CCGTTTTCAGATTCTTAAAC+CGG - chr3_1:73680745-73680764 Msa0374270:intron 35.0%
TAGTTGTACTGCATGCAATA+TGG - chr3_1:73680978-73680997 Msa0374270:intron 35.0%
CTAAGAACCAGAAAGAAAAC+AGG + chr3_1:73681360-73681379 None:intergenic 35.0%
! TGCAGGTACAGATTAAGTTT+TGG - chr3_1:73681423-73681442 Msa0374270:intron 35.0%
! GCAGGTACAGATTAAGTTTT+GGG - chr3_1:73681424-73681443 Msa0374270:intron 35.0%
TAACCTTCACCTGAATATGA+TGG - chr3_1:73681525-73681544 Msa0374270:CDS 35.0%
! TATCTCGGTGCACATAAATT+AGG + chr3_1:73681588-73681607 None:intergenic 35.0%
GATGTACAACGGAAATATCT+CGG + chr3_1:73681603-73681622 None:intergenic 35.0%
AAATTGAACCGAGAGAAATG+GGG - chr3_1:73681748-73681767 Msa0374270:five_prime_UTR 35.0%
ATGAAAGGGGAAGTTAGAGA+GGG + chr3_1:73674607-73674626 None:intergenic 40.0%
AATGAAAGGGGAAGTTAGAG+AGG + chr3_1:73674608-73674627 None:intergenic 40.0%
TAAAACATCGACGATTCTCG+CGG - chr3_1:73674753-73674772 Msa0374270:intron 40.0%
CTGAATGCTTCAGATGATAG+AGG - chr3_1:73674823-73674842 Msa0374270:intron 40.0%
AGCACTCAGAGTCTATCATT+TGG - chr3_1:73674883-73674902 Msa0374270:intron 40.0%
GCACTCAGAGTCTATCATTT+GGG - chr3_1:73674884-73674903 Msa0374270:intron 40.0%
! CTTCCTAACTTCCTTTTGTG+TGG - chr3_1:73674916-73674935 Msa0374270:intron 40.0%
CAGTAAAACACCCACACAAA+AGG + chr3_1:73674930-73674949 None:intergenic 40.0%
TTATCTTCTCCCCATCACAA+TGG + chr3_1:73675280-73675299 None:intergenic 40.0%
TATCATTCCATCAGCCAATG+CGG - chr3_1:73675520-73675539 Msa0374270:intron 40.0%
TAGATATAGAACCTCCGCAT+TGG + chr3_1:73675537-73675556 None:intergenic 40.0%
AAAGCACATGCAAGCAGAAA+GGG + chr3_1:73675747-73675766 None:intergenic 40.0%
! AAAAGCACATGCAAGCAGAA+AGG + chr3_1:73675748-73675767 None:intergenic 40.0%
! TGCTTGCATGTGCTTTTGAT+TGG - chr3_1:73675751-73675770 Msa0374270:intron 40.0%
!! GCTTGCATGTGCTTTTGATT+GGG - chr3_1:73675752-73675771 Msa0374270:intron 40.0%
AAATTGGGCATCCTTAGTCA+TGG + chr3_1:73675933-73675952 None:intergenic 40.0%
ACCTCTACGTAACGCAAATT+GGG + chr3_1:73675948-73675967 None:intergenic 40.0%
TTGAGCTACATTCTCACGAT+GGG - chr3_1:73676315-73676334 Msa0374270:CDS 40.0%
! GGGTAAACACCCGTATTTTT+GGG - chr3_1:73676339-73676358 Msa0374270:CDS 40.0%
!!! AACACCCGTATTTTTGGGAT+TGG - chr3_1:73676344-73676363 Msa0374270:CDS 40.0%
!!! ACACCCGTATTTTTGGGATT+GGG - chr3_1:73676345-73676364 Msa0374270:CDS 40.0%
!!! CGTATTTTTGGGATTGGGTT+TGG - chr3_1:73676350-73676369 Msa0374270:intron 40.0%
TTGGGTAATTACCCGCAAAT+AGG - chr3_1:73676369-73676388 Msa0374270:intron 40.0%
TGGGTAATTACCCGCAAATA+GGG - chr3_1:73676370-73676389 Msa0374270:intron 40.0%
! GCTTGCTACTAATATGCCTA+AGG - chr3_1:73676717-73676736 Msa0374270:intron 40.0%
!! GCCTGGCCTTTTTAAAAGTT+TGG + chr3_1:73676988-73677007 None:intergenic 40.0%
!!! GCTTTATTTTAAGTCTGGCC+TGG + chr3_1:73677005-73677024 None:intergenic 40.0%
GAGCTTTGCTTAAATAGGCT+AGG + chr3_1:73677077-73677096 None:intergenic 40.0%
TATTTAAGCAAAGCTCGGCT+CGG - chr3_1:73677081-73677100 Msa0374270:intron 40.0%
CCATTCAAATTTGCGAGTAG+GGG + chr3_1:73677122-73677141 None:intergenic 40.0%
CCCATTCAAATTTGCGAGTA+GGG + chr3_1:73677123-73677142 None:intergenic 40.0%
CCCTACTCGCAAATTTGAAT+GGG - chr3_1:73677120-73677139 Msa0374270:intron 40.0%
ACCCATTCAAATTTGCGAGT+AGG + chr3_1:73677124-73677143 None:intergenic 40.0%
AAATTTGAATGGGTGTGGTG+CGG - chr3_1:73677130-73677149 Msa0374270:intron 40.0%
GTGTAGTCTATATAGTGTGC+GGG + chr3_1:73677190-73677209 None:intergenic 40.0%
GTTGTTGTCATGTGACTGTA+AGG - chr3_1:73677396-73677415 Msa0374270:intron 40.0%
ACAGCCTCTTGTGTAAAAAC+AGG - chr3_1:73677440-73677459 Msa0374270:intron 40.0%
CAGCCTCTTGTGTAAAAACA+GGG - chr3_1:73677441-73677460 Msa0374270:intron 40.0%
CGTACAATACACCAAATGGT+GGG - chr3_1:73677472-73677491 Msa0374270:CDS 40.0%
CATAGTAAAAAAGGGCAACC+CGG + chr3_1:73677538-73677557 None:intergenic 40.0%
! GGAACCATTAAGTGATAGTG+TGG - chr3_1:73678239-73678258 Msa0374270:intron 40.0%
GATGGTAATACATGCTGATC+TGG - chr3_1:73678341-73678360 Msa0374270:intron 40.0%
GCAAGTTACCAATCCCAAAA+TGG + chr3_1:73678449-73678468 None:intergenic 40.0%
!! CAGGGAAGCTTGTTATAACA+TGG - chr3_1:73678792-73678811 Msa0374270:intron 40.0%
!! CAGGGAAGCTTGTTATAACA+TGG - chr3_1:73678792-73678811 Msa0374270:intron 40.0%
!! ATTAGCACACTTGTTGACTC+AGG + chr3_1:73679183-73679202 None:intergenic 40.0%
TAAGACCATGTACCGAATTC+AGG + chr3_1:73679338-73679357 None:intergenic 40.0%
TTCTTCAGTAATCTGCTGAG+AGG + chr3_1:73679686-73679705 None:intergenic 40.0%
TTACCAGGTAGTTGGATGTT+AGG + chr3_1:73679967-73679986 None:intergenic 40.0%
!! AGTGCAGTTGGTGAATGATT+TGG - chr3_1:73680064-73680083 Msa0374270:intron 40.0%
TTTGTAAGGCTGAGAGAAAG+TGG - chr3_1:73680204-73680223 Msa0374270:intron 40.0%
GTATCTTATTGCTGGGAACA+GGG - chr3_1:73680226-73680245 Msa0374270:intron 40.0%
! AATTAGGGCCTTTTGGCATT+GGG + chr3_1:73680304-73680323 None:intergenic 40.0%
AGTTGGGTAGTTAGAAAGCA+AGG + chr3_1:73680380-73680399 None:intergenic 40.0%
! CTACCCAACTGACTCTTATT+AGG - chr3_1:73680390-73680409 Msa0374270:intron 40.0%
!! CCCGATTTGTTACCTAAGAT+AGG + chr3_1:73680549-73680568 None:intergenic 40.0%
TTAGGTAACAAATCGGGCTA+TGG - chr3_1:73680552-73680571 Msa0374270:intron 40.0%
TTAAGAATCTGAAAACGGGG+GGG + chr3_1:73680743-73680762 None:intergenic 40.0%
ACAGCTACGTATACATGTAC+CGG + chr3_1:73680767-73680786 None:intergenic 40.0%
ACAGCTACGTATACATGTAC+CGG + chr3_1:73680767-73680786 None:intergenic 40.0%
AGGTGTACAAATGGTCATTC+AGG + chr3_1:73681040-73681059 None:intergenic 40.0%
CACACAAGTAGGTGTACAAA+TGG + chr3_1:73681049-73681068 None:intergenic 40.0%
AGGGGATATGTCTATATTCC+GGG + chr3_1:73681145-73681164 None:intergenic 40.0%
CAGGGGATATGTCTATATTC+CGG + chr3_1:73681146-73681165 None:intergenic 40.0%
GTCAGATGAAGCCAAATTTC+AGG + chr3_1:73681240-73681259 None:intergenic 40.0%
TCTAGCACATACATAACGAC+TGG + chr3_1:73681262-73681281 None:intergenic 40.0%
! ATGATGGCCTGTTTTCTTTC+TGG - chr3_1:73681350-73681369 Msa0374270:intron 40.0%
ATCAGTGCACCATCATATTC+AGG + chr3_1:73681537-73681556 None:intergenic 40.0%
TTTCCGTTGTACATCGTAGA+AGG - chr3_1:73681608-73681627 Msa0374270:exon 40.0%
!! AGGGAAGACTGTGTTTTGAG+CGG - chr3_1:73674273-73674292 Msa0374270:three_prime_UTR 45.0%
TCTGTGAAGTCGATGTCCAT+AGG + chr3_1:73674447-73674466 None:intergenic 45.0%
!! GACATCGACTTCACAGACAA+GGG - chr3_1:73674450-73674469 Msa0374270:three_prime_UTR 45.0%
TTACCCCATCTGCTGTTGTA+TGG - chr3_1:73674715-73674734 Msa0374270:intron 45.0%
AGGACCATACAACAGCAGAT+GGG + chr3_1:73674722-73674741 None:intergenic 45.0%
CACCCACACAAAAGGAAGTT+AGG + chr3_1:73674922-73674941 None:intergenic 45.0%
TCGAAGCACATTTCACGGTA+TGG + chr3_1:73675078-73675097 None:intergenic 45.0%
CGCTAATTACTGCTGAACTC+TGG + chr3_1:73675484-73675503 None:intergenic 45.0%
GAGTTCAGCAGTAATTAGCG+TGG - chr3_1:73675484-73675503 Msa0374270:intron 45.0%
CGTCAAACCCTCTGTAAAAC+TGG - chr3_1:73675886-73675905 Msa0374270:intron 45.0%
TGAAGCAGATGCCATGACTA+AGG - chr3_1:73675919-73675938 Msa0374270:intron 45.0%
CACCTCTACGTAACGCAAAT+TGG + chr3_1:73675949-73675968 None:intergenic 45.0%
TGCATCTTGATTGCAGTGCT+GGG + chr3_1:73676127-73676146 None:intergenic 45.0%
AATCAAGATGCACCCGGTTT+CGG - chr3_1:73676135-73676154 Msa0374270:intron 45.0%
TGACATGGACAGCATCAAGA+GGG + chr3_1:73676166-73676185 None:intergenic 45.0%
GTTTCAGTCTCTCAGTGACA+TGG + chr3_1:73676181-73676200 None:intergenic 45.0%
GTTGAGCTACATTCTCACGA+TGG - chr3_1:73676314-73676333 Msa0374270:CDS 45.0%
! CGGGTAAACACCCGTATTTT+TGG - chr3_1:73676338-73676357 Msa0374270:CDS 45.0%
GGGTAATTACCCGCAAATAG+GGG - chr3_1:73676371-73676390 Msa0374270:intron 45.0%
TAATTACCCGCAAATAGGGG+TGG - chr3_1:73676374-73676393 Msa0374270:intron 45.0%
AATTACCCGCAAATAGGGGT+GGG - chr3_1:73676375-73676394 Msa0374270:intron 45.0%
AAAAGCCTATCAAGCCTACC+AGG - chr3_1:73676537-73676556 Msa0374270:intron 45.0%
!! CTTGGCCTTTTACCTGTCAA+AGG + chr3_1:73677027-73677046 None:intergenic 45.0%
CAGGTAAAAGGCCAAGACTT+AGG - chr3_1:73677031-73677050 Msa0374270:intron 45.0%
GAGCCGAGCTTTGCTTAAAT+AGG + chr3_1:73677082-73677101 None:intergenic 45.0%
TCAAATTTGCGAGTAGGGGT+GGG + chr3_1:73677118-73677137 None:intergenic 45.0%
TTCAAATTTGCGAGTAGGGG+TGG + chr3_1:73677119-73677138 None:intergenic 45.0%
CCCCTACTCGCAAATTTGAA+TGG - chr3_1:73677119-73677138 Msa0374270:intron 45.0%
CTCGCAAATTTGAATGGGTG+TGG - chr3_1:73677125-73677144 Msa0374270:intron 45.0%
AATTTGAATGGGTGTGGTGC+GGG - chr3_1:73677131-73677150 Msa0374270:intron 45.0%
TGTAATAGGAGGGGTAACCT+TGG - chr3_1:73677360-73677379 Msa0374270:intron 45.0%
CAACTTTACCAGTTGAGCCA+AGG + chr3_1:73677380-73677399 None:intergenic 45.0%
GTCATGTGACTGTAAGGTCA+CGG - chr3_1:73677402-73677421 Msa0374270:intron 45.0%
TCATGTGACTGTAAGGTCAC+GGG - chr3_1:73677403-73677422 Msa0374270:intron 45.0%
GCTGCGTACAATACACCAAA+TGG - chr3_1:73677468-73677487 Msa0374270:CDS 45.0%
GCGTACAATACACCAAATGG+TGG - chr3_1:73677471-73677490 Msa0374270:CDS 45.0%
TAGTAAGTACCCTGCCGAAA+GGG - chr3_1:73677683-73677702 Msa0374270:intron 45.0%
AAGGCAAAGGGATCTGTATG+TGG + chr3_1:73677718-73677737 None:intergenic 45.0%
TGCATGTGCATTTCAACTGC+TGG - chr3_1:73678078-73678097 Msa0374270:intron 45.0%
AGGCTTGATGTTCAAGACAG+TGG - chr3_1:73678503-73678522 Msa0374270:intron 45.0%
GTGGCTTATCTGCTCTTGTT+CGG - chr3_1:73678522-73678541 Msa0374270:intron 45.0%
! GGCACTGAATATTCTTCAGG+TGG - chr3_1:73678568-73678587 Msa0374270:intron 45.0%
TGTGTGAATGCAAGCGAAAG+GGG + chr3_1:73678745-73678764 None:intergenic 45.0%
GTGTGTGAATGCAAGCGAAA+GGG + chr3_1:73678746-73678765 None:intergenic 45.0%
TGTGTGTGAATGCAAGCGAA+AGG + chr3_1:73678747-73678766 None:intergenic 45.0%
TCGCTTGCATTCACACACAA+TGG - chr3_1:73678748-73678767 Msa0374270:intron 45.0%
TGTGTGAATGCAAGCGAAAG+GGG + chr3_1:73678745-73678764 None:intergenic 45.0%
GTGTGTGAATGCAAGCGAAA+GGG + chr3_1:73678746-73678765 None:intergenic 45.0%
TGTGTGTGAATGCAAGCGAA+AGG + chr3_1:73678747-73678766 None:intergenic 45.0%
TCGCTTGCATTCACACACAA+TGG - chr3_1:73678748-73678767 Msa0374270:intron 45.0%
TGTGTCAATGCACACGACAT+GGG + chr3_1:73679105-73679124 None:intergenic 45.0%
! TCGTGTGCATTGACACACTT+CGG - chr3_1:73679108-73679127 Msa0374270:intron 45.0%
GAAGCCGTTTATCTTTGCAC+TGG - chr3_1:73679703-73679722 Msa0374270:intron 45.0%
CATCCTAACATCCAACTACC+TGG - chr3_1:73679961-73679980 Msa0374270:intron 45.0%
ATTCACCAACTGCACTCGAA+CGG + chr3_1:73680060-73680079 None:intergenic 45.0%
TGTTTGTCGGGTCAAGCATA+AGG + chr3_1:73680136-73680155 None:intergenic 45.0%
GGTATCTTATTGCTGGGAAC+AGG - chr3_1:73680225-73680244 Msa0374270:intron 45.0%
! TCCACGCTGACTACAAACAA+TGG - chr3_1:73680254-73680273 Msa0374270:intron 45.0%
! GAATTAGGGCCTTTTGGCAT+TGG + chr3_1:73680305-73680324 None:intergenic 45.0%
! TTGAGCGAATTAGGGCCTTT+TGG + chr3_1:73680311-73680330 None:intergenic 45.0%
! CAAGGCATGTTGCTTAAGAG+GGG + chr3_1:73680362-73680381 None:intergenic 45.0%
! GCAAGGCATGTTGCTTAAGA+GGG + chr3_1:73680363-73680382 None:intergenic 45.0%
! AGCAAGGCATGTTGCTTAAG+AGG + chr3_1:73680364-73680383 None:intergenic 45.0%
GAAAGGAAAATAGGCTCCTC+AGG - chr3_1:73680417-73680436 Msa0374270:intron 45.0%
CTTACATATGTACAGGCCTG+AGG + chr3_1:73680436-73680455 None:intergenic 45.0%
CTCAGGCCTGTACATATGTA+AGG - chr3_1:73680434-73680453 Msa0374270:intron 45.0%
TAAGAATCTGAAAACGGGGG+GGG + chr3_1:73680742-73680761 None:intergenic 45.0%
GAACGACAAAGCACACAAGT+AGG + chr3_1:73681060-73681079 None:intergenic 45.0%
! ATTAAGTCTGAAGTGGGGTG+AGG + chr3_1:73681177-73681196 None:intergenic 45.0%
! GGGACATTAAGTCTGAAGTG+GGG + chr3_1:73681182-73681201 None:intergenic 45.0%
! CGGGACATTAAGTCTGAAGT+GGG + chr3_1:73681183-73681202 None:intergenic 45.0%
ACGGGACATTAAGTCTGAAG+TGG + chr3_1:73681184-73681203 None:intergenic 45.0%
GAAGCCAAATTTCAGGCACT+CGG + chr3_1:73681233-73681252 None:intergenic 45.0%
TGCAACGATAAGCTTCAGCT+TGG - chr3_1:73681447-73681466 Msa0374270:CDS 45.0%
TACACGTGCTAGATCTGCAA+TGG - chr3_1:73681488-73681507 Msa0374270:CDS 45.0%
GCACCATCATATTCAGGTGA+AGG + chr3_1:73681531-73681550 None:intergenic 45.0%
CCTCCTTCTACGATGTACAA+CGG + chr3_1:73681614-73681633 None:intergenic 45.0%
! TGGTGCTAACAGCCTAATAC+TGG - chr3_1:73681642-73681661 Msa0374270:five_prime_UTR 45.0%
! GGTTATGTTGACTGCTCTGA+TGG - chr3_1:73681678-73681697 Msa0374270:five_prime_UTR 45.0%
!! ATAATAATAACAATAATAAA+TGG + chr3_1:73679463-73679482 None:intergenic 5.0%
!! GGGAAGACTGTGTTTTGAGC+GGG - chr3_1:73674274-73674293 Msa0374270:three_prime_UTR 50.0%
GGGTTTAATAACCATGGCGG+AGG - chr3_1:73674413-73674432 Msa0374270:three_prime_UTR 50.0%
!! GGACATCGACTTCACAGACA+AGG - chr3_1:73674449-73674468 Msa0374270:three_prime_UTR 50.0%
AAGCTTTGCCACCGAAGGAA+GGG + chr3_1:73674500-73674519 None:intergenic 50.0%
! TACTTGTGTCGACGATGTCG+CGG + chr3_1:73674575-73674594 None:intergenic 50.0%
GGGGAAGTTAGAGAGGGAAA+GGG + chr3_1:73674601-73674620 None:intergenic 50.0%
AGGGGAAGTTAGAGAGGGAA+AGG + chr3_1:73674602-73674621 None:intergenic 50.0%
GGACCATACAACAGCAGATG+GGG + chr3_1:73674721-73674740 None:intergenic 50.0%
GAGGACCATACAACAGCAGA+TGG + chr3_1:73674723-73674742 None:intergenic 50.0%
GTTGTATGGTCCTCCTGGAA+CGG - chr3_1:73674729-73674748 Msa0374270:intron 50.0%
TTGTATGGTCCTCCTGGAAC+GGG - chr3_1:73674730-73674749 Msa0374270:intron 50.0%
! GATGTTTTACCCGTTCCAGG+AGG + chr3_1:73674742-73674761 None:intergenic 50.0%
! GTCGATGTTTTACCCGTTCC+AGG + chr3_1:73674745-73674764 None:intergenic 50.0%
GCGGTGGCGCGAAAATTATA+CGG - chr3_1:73674772-73674791 Msa0374270:intron 50.0%
GCCCAATTTGCGTTACGTAG+AGG - chr3_1:73675944-73675963 Msa0374270:CDS 50.0%
GTGCATCTTGATTGCAGTGC+TGG + chr3_1:73676128-73676147 None:intergenic 50.0%
CACTGCAATCAAGATGCACC+CGG - chr3_1:73676129-73676148 Msa0374270:CDS 50.0%
GACATGGACAGCATCAAGAG+GGG + chr3_1:73676165-73676184 None:intergenic 50.0%
GTGACATGGACAGCATCAAG+AGG + chr3_1:73676167-73676186 None:intergenic 50.0%
AGCTACATTCTCACGATGGG+CGG - chr3_1:73676318-73676337 Msa0374270:CDS 50.0%
CTATTCCCACCCCTATTTGC+GGG + chr3_1:73676383-73676402 None:intergenic 50.0%
CCTATTCCCACCCCTATTTG+CGG + chr3_1:73676384-73676403 None:intergenic 50.0%
! CTTTTAGTAGGCCGAGCCAT+AGG + chr3_1:73676426-73676445 None:intergenic 50.0%
! TCTATATAGTGTGCGGGCTG+CGG + chr3_1:73677184-73677203 None:intergenic 50.0%
AAGGTCACGGGTTCAAGTCT+TGG - chr3_1:73677415-73677434 Msa0374270:intron 50.0%
CTGAAGCTCCCGCATATGTA+GGG + chr3_1:73677511-73677530 None:intergenic 50.0%
ACTGAAGCTCCCGCATATGT+AGG + chr3_1:73677512-73677531 None:intergenic 50.0%
TATTAACGCGGGTATGGGGA+TGG - chr3_1:73677654-73677673 Msa0374270:intron 50.0%
ATTAACGCGGGTATGGGGAT+GGG - chr3_1:73677655-73677674 Msa0374270:intron 50.0%
GTAGTAAGTACCCTGCCGAA+AGG - chr3_1:73677682-73677701 Msa0374270:intron 50.0%
AGGGATCTGTATGTGGCACA+GGG + chr3_1:73677711-73677730 None:intergenic 50.0%
AAGGGATCTGTATGTGGCAC+AGG + chr3_1:73677712-73677731 None:intergenic 50.0%
GCTCTTGTTCGGCTTAGCAA+TGG - chr3_1:73678533-73678552 Msa0374270:intron 50.0%
GTGTGAATGCAAGCGAAAGG+GGG + chr3_1:73678744-73678763 None:intergenic 50.0%
GTGTGAATGCAAGCGAAAGG+GGG + chr3_1:73678744-73678763 None:intergenic 50.0%
GTGTCAATGCACACGACATG+GGG + chr3_1:73679104-73679123 None:intergenic 50.0%
GTGTGTCAATGCACACGACA+TGG + chr3_1:73679106-73679125 None:intergenic 50.0%
TGCTCAATGTCTTTGGGCAG+TGG + chr3_1:73679733-73679752 None:intergenic 50.0%
GCCATTGTTTGTAGTCAGCG+TGG + chr3_1:73680258-73680277 None:intergenic 50.0%
TGAGTAGCCTGAACCTCAAC+TGG - chr3_1:73680509-73680528 Msa0374270:intron 50.0%
AGCCTGAACCTCAACTGGAA+AGG - chr3_1:73680514-73680533 Msa0374270:intron 50.0%
GTCCTTTCCAGTTGAGGTTC+AGG + chr3_1:73680519-73680538 None:intergenic 50.0%
AAGAATCTGAAAACGGGGGG+GGG + chr3_1:73680741-73680760 None:intergenic 50.0%
GGGAAGAGCTACTATGCAAC+TGG - chr3_1:73680846-73680865 Msa0374270:intron 50.0%
TTTGTCGTTCTCACGCGTCT+AGG - chr3_1:73681070-73681089 Msa0374270:intron 50.0%
TGGGGTGAGGAGAAAGAACA+GGG + chr3_1:73681164-73681183 None:intergenic 50.0%
AAAGAAGGACGACGCTGCAA+CGG + chr3_1:73681203-73681222 None:intergenic 50.0%
! AGCGTCGTCCTTCTTTTCAG+TGG - chr3_1:73681207-73681226 Msa0374270:CDS 50.0%
CCGTTGTACATCGTAGAAGG+AGG - chr3_1:73681611-73681630 Msa0374270:five_prime_UTR 50.0%
!! ACATCGTAGAAGGAGGCATC+AGG - chr3_1:73681618-73681637 Msa0374270:five_prime_UTR 50.0%
AGGATAAGTCTCCTCCGCCA+TGG + chr3_1:73674427-73674446 None:intergenic 55.0%
GGCGGAGGAGACTTATCCTA+TGG - chr3_1:73674428-73674447 Msa0374270:three_prime_UTR 55.0%
GAAGCTTTGCCACCGAAGGA+AGG + chr3_1:73674501-73674520 None:intergenic 55.0%
TAGCGAAGCTTTGCCACCGA+AGG + chr3_1:73674505-73674524 None:intergenic 55.0%
TCGGTGGCAAAGCTTCGCTA+TGG - chr3_1:73674505-73674524 Msa0374270:exon 55.0%
CGGTGGCAAAGCTTCGCTAT+GGG - chr3_1:73674506-73674525 Msa0374270:exon 55.0%
GCAACATCGTCGAGGGATTG+AGG + chr3_1:73674546-73674565 None:intergenic 55.0%
GTGAGCTGCAACATCGTCGA+GGG + chr3_1:73674553-73674572 None:intergenic 55.0%
CTGCTGTTGTATGGTCCTCC+TGG - chr3_1:73674724-73674743 Msa0374270:intron 55.0%
AACATCGACGATTCTCGCGG+TGG - chr3_1:73674756-73674775 Msa0374270:intron 55.0%
CATTCCATCAGCCAATGCGG+AGG - chr3_1:73675523-73675542 Msa0374270:intron 55.0%
!! AGAACCTCCGCATTGGCTGA+TGG + chr3_1:73675530-73675549 None:intergenic 55.0%
AAGAGGGGCAAACCGAAACC+GGG + chr3_1:73676150-73676169 None:intergenic 55.0%
CAAGAGGGGCAAACCGAAAC+CGG + chr3_1:73676151-73676170 None:intergenic 55.0%
GCTACATTCTCACGATGGGC+GGG - chr3_1:73676319-73676338 Msa0374270:CDS 55.0%
CCGCAAATAGGGGTGGGAAT+AGG - chr3_1:73676381-73676400 Msa0374270:intron 55.0%
AATAGGGGTGGGAATAGGCC+AGG - chr3_1:73676386-73676405 Msa0374270:intron 55.0%
GGCTCGGCCTACTAAAAGCT+CGG - chr3_1:73676428-73676447 Msa0374270:intron 55.0%
GGCCTACTAAAAGCTCGGCT+CGG - chr3_1:73676433-73676452 Msa0374270:intron 55.0%
TACTAGTATACCGACCGGCC+TGG + chr3_1:73676558-73676577 None:intergenic 55.0%
! TATATAGTGTGCGGGCTGCG+GGG + chr3_1:73677182-73677201 None:intergenic 55.0%
! CTATATAGTGTGCGGGCTGC+GGG + chr3_1:73677183-73677202 None:intergenic 55.0%
AGGGGTAACCTTGGCTCAAC+TGG - chr3_1:73677369-73677388 Msa0374270:intron 55.0%
CATATGTAGGGTCCGGGAAG+GGG + chr3_1:73677499-73677518 None:intergenic 55.0%
GCATATGTAGGGTCCGGGAA+GGG + chr3_1:73677500-73677519 None:intergenic 55.0%
CTTCCCGGACCCTACATATG+CGG - chr3_1:73677499-73677518 Msa0374270:CDS 55.0%
TTCCCGGACCCTACATATGC+GGG - chr3_1:73677500-73677519 Msa0374270:CDS 55.0%
! TGTGGCACAGGGTACCCTTT+CGG + chr3_1:73677700-73677719 None:intergenic 55.0%
GCCTACCTCCCAATGCCAAA+AGG - chr3_1:73680293-73680312 Msa0374270:intron 55.0%
!! GCCTTTTGGCATTGGGAGGT+AGG + chr3_1:73680297-73680316 None:intergenic 55.0%
!! TAGGGCCTTTTGGCATTGGG+AGG + chr3_1:73680301-73680320 None:intergenic 55.0%
AGAATCTGAAAACGGGGGGG+GGG + chr3_1:73680740-73680759 None:intergenic 55.0%
GGGGTGAGGAGAAAGAACAG+GGG + chr3_1:73681163-73681182 None:intergenic 55.0%
GTGGGGTGAGGAGAAAGAAC+AGG + chr3_1:73681165-73681184 None:intergenic 55.0%
AAGAAGGACGACGCTGCAAC+GGG + chr3_1:73681202-73681221 None:intergenic 55.0%
GCACTCGGCCACTGAAAAGA+AGG + chr3_1:73681218-73681237 None:intergenic 55.0%
GTGGCCGAGTGCCTGAAATT+TGG - chr3_1:73681226-73681245 Msa0374270:CDS 55.0%
!! CGTAGAAGGAGGCATCAGGA+TGG - chr3_1:73681622-73681641 Msa0374270:five_prime_UTR 55.0%
GGCAAAACCGTCATTGCCGC+CGG - chr3_1:73674471-73674490 Msa0374270:three_prime_UTR 60.0%
AGGGTTACCGGCGGCAATGA+CGG + chr3_1:73674481-73674500 None:intergenic 60.0%
ACCGAAGGAAGGGTTACCGG+CGG + chr3_1:73674490-73674509 None:intergenic 60.0%
GCCACCGAAGGAAGGGTTAC+CGG + chr3_1:73674493-73674512 None:intergenic 60.0%
GGTGAGCTGCAACATCGTCG+AGG + chr3_1:73674554-73674573 None:intergenic 60.0%
! GGCCGAGCCGAGCTTTTAGT+AGG + chr3_1:73676438-73676457 None:intergenic 60.0%
GCCTATCAAGCCTACCAGGC+CGG - chr3_1:73676541-73676560 Msa0374270:intron 60.0%
ACCGGCCTGGTAGGCTTGAT+AGG + chr3_1:73676545-73676564 None:intergenic 60.0%
ATCAAGCCTACCAGGCCGGT+CGG - chr3_1:73676545-73676564 Msa0374270:intron 60.0%
AGTATACCGACCGGCCTGGT+AGG + chr3_1:73676554-73676573 None:intergenic 60.0%
AGTAGGGGTGGGAATGAGCC+GGG + chr3_1:73677107-73677126 None:intergenic 60.0%
GAGTAGGGGTGGGAATGAGC+CGG + chr3_1:73677108-73677127 None:intergenic 60.0%
AATGGGTGTGGTGCGGGTGT+GGG - chr3_1:73677137-73677156 Msa0374270:intron 60.0%
! CAAATGGTGGGACCCCTTCC+CGG - chr3_1:73677484-73677503 Msa0374270:CDS 60.0%
CGCATATGTAGGGTCCGGGA+AGG + chr3_1:73677501-73677520 None:intergenic 60.0%
CTCCCGCATATGTAGGGTCC+GGG + chr3_1:73677505-73677524 None:intergenic 60.0%
GCTCCCGCATATGTAGGGTC+CGG + chr3_1:73677506-73677525 None:intergenic 60.0%
ATGCGGGAGCTTCAGTGCAC+CGG - chr3_1:73677516-73677535 Msa0374270:intron 60.0%
! CACAGGGTACCCTTTCGGCA+GGG + chr3_1:73677695-73677714 None:intergenic 60.0%
AACTGCACTCGAACGGCTGG+CGG + chr3_1:73680053-73680072 None:intergenic 60.0%
ACCAACTGCACTCGAACGGC+TGG + chr3_1:73680056-73680075 None:intergenic 60.0%
AATCTGAAAACGGGGGGGGG+GGG + chr3_1:73680738-73680757 None:intergenic 60.0%
GAATCTGAAAACGGGGGGGG+GGG + chr3_1:73680739-73680758 None:intergenic 60.0%
GCCGCCGGTAACCCTTCCTT+CGG - chr3_1:73674486-73674505 Msa0374270:three_prime_UTR 65.0%
GCCGGTAACCCTTCCTTCGG+TGG - chr3_1:73674489-73674508 Msa0374270:exon 65.0%
AATAGGCCAGGCCGCTCGTC+AGG - chr3_1:73676398-73676417 Msa0374270:intron 65.0%
ATAGGCCAGGCCGCTCGTCA+GGG - chr3_1:73676399-73676418 Msa0374270:intron 65.0%
AGCCATAGGCCCCTGACGAG+CGG + chr3_1:73676412-73676431 None:intergenic 65.0%
CTCGTCAGGGGCCTATGGCT+CGG - chr3_1:73676412-73676431 Msa0374270:intron 65.0%
!! AAGCAAAGCTCGGCTCGGCC+CGG - chr3_1:73677086-73677105 Msa0374270:intron 65.0%
GAATGGGTGTGGTGCGGGTG+TGG - chr3_1:73677136-73677155 Msa0374270:intron 65.0%
CGGGAAGGGGTCCCACCATT+TGG + chr3_1:73677486-73677505 None:intergenic 65.0%
TGCGGGAGCTTCAGTGCACC+GGG - chr3_1:73677517-73677536 Msa0374270:intron 65.0%
! GCACAGGGTACCCTTTCGGC+AGG + chr3_1:73677696-73677715 None:intergenic 65.0%
GCCAGCCGTTCGAGTGCAGT+TGG - chr3_1:73680052-73680071 Msa0374270:intron 65.0%
ATCTGAAAACGGGGGGGGGG+GGG + chr3_1:73680737-73680756 None:intergenic 65.0%
TAGGCCAGGCCGCTCGTCAG+GGG - chr3_1:73676400-73676419 Msa0374270:intron 70.0%
! ATAGTGTGCGGGCTGCGGGG+CGG + chr3_1:73677179-73677198 None:intergenic 70.0%
TCTGAAAACGGGGGGGGGGG+GGG + chr3_1:73680736-73680755 None:intergenic 70.0%
TAGGCCCCTGACGAGCGGCC+TGG + chr3_1:73676407-73676426 None:intergenic 75.0%
GGCCGCTCGTCAGGGGCCTA+TGG - chr3_1:73676407-73676426 Msa0374270:intron 75.0%
TGAAAACGGGGGGGGGGGGG+GGG + chr3_1:73680734-73680753 None:intergenic 75.0%
CTGAAAACGGGGGGGGGGGG+GGG + chr3_1:73680735-73680754 None:intergenic 75.0%
!! TGCGGGCTGCGGGGCGGACT+GGG + chr3_1:73677173-73677192 None:intergenic 80.0%
! AAAACGGGGGGGGGGGGGGG+GGG + chr3_1:73680732-73680751 None:intergenic 80.0%
! GAAAACGGGGGGGGGGGGGG+GGG + chr3_1:73680733-73680752 None:intergenic 80.0%
!! GTGCGGGCTGCGGGGCGGAC+TGG + chr3_1:73677174-73677193 None:intergenic 85.0%
! AAACGGGGGGGGGGGGGGGG+GGG + chr3_1:73680731-73680750 None:intergenic 85.0%
! GGGGGGGGGGGGGGCGGCAA+AGG + chr3_1:73680719-73680738 None:intergenic 90.0%
! AACGGGGGGGGGGGGGGGGG+GGG + chr3_1:73680730-73680749 None:intergenic 90.0%
! ACGGGGGGGGGGGGGGGGGG+GGG + chr3_1:73680729-73680748 None:intergenic 95.0%
Chromosome Type Strat End Strand Name
chr3_1 gene 73674260 73681775 73674260 ID=Msa0374270;Name=Msa0374270
chr3_1 mRNA 73674260 73681775 73674260 ID=Msa0374270-mRNA-1;Parent=Msa0374270;Name=Msa0374270-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|1|1|9|248|355
chr3_1 exon 73674260 73674607 73674260 ID=Msa0374270-mRNA-1:exon:16779;Parent=Msa0374270-mRNA-1
chr3_1 exon 73675939 73676007 73675939 ID=Msa0374270-mRNA-1:exon:16778;Parent=Msa0374270-mRNA-1
chr3_1 exon 73676090 73676153 73676090 ID=Msa0374270-mRNA-1:exon:16777;Parent=Msa0374270-mRNA-1
chr3_1 exon 73676236 73676365 73676236 ID=Msa0374270-mRNA-1:exon:16776;Parent=Msa0374270-mRNA-1
chr3_1 exon 73677449 73677530 73677449 ID=Msa0374270-mRNA-1:exon:16775;Parent=Msa0374270-mRNA-1
chr3_1 exon 73679816 73679975 73679816 ID=Msa0374270-mRNA-1:exon:16774;Parent=Msa0374270-mRNA-1
chr3_1 exon 73680070 73680149 73680070 ID=Msa0374270-mRNA-1:exon:16773;Parent=Msa0374270-mRNA-1
chr3_1 exon 73681130 73681346 73681130 ID=Msa0374270-mRNA-1:exon:16772;Parent=Msa0374270-mRNA-1
chr3_1 exon 73681444 73681775 73681444 ID=Msa0374270-mRNA-1:exon:16771;Parent=Msa0374270-mRNA-1
chr3_1 five_prime_UTR 73681610 73681775 73681610 ID=Msa0374270-mRNA-1:five_prime_utr;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73681444 73681609 73681444 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73681130 73681346 73681130 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73680070 73680149 73680070 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73679816 73679975 73679816 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73677449 73677530 73677449 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73676236 73676365 73676236 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73676090 73676153 73676090 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73675939 73676007 73675939 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 CDS 73674508 73674607 73674508 ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1
chr3_1 three_prime_UTR 73674260 73674507 73674260 ID=Msa0374270-mRNA-1:three_prime_utr;Parent=Msa0374270-mRNA-1
Gene Sequence

>Msa0374270

ATGGCGGAGGAGACTTATCCTATGGACATCGACTTCACAGACAAGGGCAAAACCGTCATTGCCGCCGGTAACCCTTCCTTCGGTGGCAAAGCTTCGCTATGGGTTGAAAAGTATCGTCCTCAATCCCTCGACGATGTTGCAGCTCACCGCGACATCGTCGACACAATTGATAGGTTGACTACTGAGAATAGATTACCCCATCTGCTGTTGTATGGTCCTCCTGGAACGGGTAAAACATCGACGATTCTCGCGGTGGCGCGAAAATTATACGGTGCTCAGTATCATAATATGATTTTGGAACTGAATGCTTCAGATGATAGAGGAATTGATGTAGTTAGACAGCAGATTCAAGATTTTGCTAGCACTCAGAGTCTATCATTTGGCGTCAAACCCTCTGTAAAACTGGTCTTGTTAGATGAAGCAGATGCCATGACTAAGGATGCCCAATTTGCGTTACGTAGAGTCATCGAGAAATATACAAAGAGCACTAGGTTTGCACTTATCTGTAATCATGTAAACAAGATTATCCCAGCACTGCAATCAAGATGCACCCGGTTTCGGTTTGCCCCTCTTGATGCTGTCCATGTCACTGAGAGACTGAAACATGTTATCAATGCTGAAAGGCTTGATGTTCAAGACAGTGGCTTATCTGCTCTTGTTCGGCTTAGCAATGGTGATATGAGAAAGGCACTGAATATTCTTCAGTCAACTCATATGGCCTCTCAGCAGATTACTGAAGAAGCCGTTTATCTTTGCACTGGAAATCCACTGCCCAAAGACATTGAGCAAATATCTTACTGGCTTCTAAATGAACAATATTCAGAAAGCTTTAAAAGAATATATGATATGAAAACAAGGAAAGGACTGGCTCTGATTGATATCGTAAGAGAAGTGACAATGTTTGTCTTCAAGATTAACATGCCGCCAGCCGTTCGAGTGCAGTTGGTGAATGATTTGGCTGACATAGAGTACAGATTAAGTTTTGGGTGCAACGATAAGCTTCAGCTTGGATCAGTTGTTGCTACATTTACACGTGCTAGATCTGCAATGGTTGCAGCTGCTGCATAA

Protein sequence

>Msa0374270

MAEETYPMDIDFTDKGKTVIAAGNPSFGGKASLWVEKYRPQSLDDVAAHRDIVDTIDRLTTENRLPHLLLYGPPGTGKTSTILAVARKLYGAQYHNMILELNASDDRGIDVVRQQIQDFASTQSLSFGVKPSVKLVLLDEADAMTKDAQFALRRVIEKYTKSTRFALICNHVNKIIPALQSRCTRFRFAPLDAVHVTERLKHVINAERLDVQDSGLSALVRLSNGDMRKALNILQSTHMASQQITEEAVYLCTGNPLPKDIEQISYWLLNEQYSESFKRIYDMKTRKGLALIDIVREVTMFVFKINMPPAVRVQLVNDLADIEYRLSFGCNDKLQLGSVVATFTRARSAMVAAAA*