Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0374270 | XP_003602039.1 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0374270 | sp|Q6YZ54|RFC3_ORYSJ | 80.112 | 357 | 67 | 1 | 2 | 354 | 4 | 360 | 0.0 | 590 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0374270 | G7J4X7 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0374270 | Msa0469740 | 0.963763 | 1.744382e-122 | -8.615850e-47 |
Msa0374270 | Msa0515560 | 0.960306 | 2.080612e-118 | -8.615850e-47 |
Msa0374270 | Msa0931440 | 0.962496 | 6.024913e-121 | -8.615850e-47 |
Msa0374270 | Msa1025200 | 0.837363 | 5.433637e-57 | -8.615850e-47 |
Msa0374270 | Msa1025220 | 0.832021 | 1.198595e-55 | -8.615850e-47 |
Msa0374270 | Msa1026710 | 0.828647 | 8.003055e-55 | -8.615850e-47 |
Msa0374270 | Msa1136880 | 0.802099 | 6.587968e-49 | -8.615850e-47 |
Msa0374270 | Msa1347610 | 0.823909 | 1.074480e-53 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0374270 | MtrunA17_Chr3g0124791 | 98.873 | 355 | 4 | 0 | 1 | 355 | 1 | 355 | 0.0 | 728 |
Msa0374270 | MtrunA17_Chr4g0057341 | 37.346 | 324 | 192 | 4 | 34 | 353 | 17 | 333 | 3.08e-67 | 215 |
Msa0374270 | MtrunA17_Chr3g0125031 | 47.368 | 209 | 104 | 2 | 34 | 236 | 11 | 219 | 1.11e-63 | 206 |
Msa0374270 | MtrunA17_Chr6g0478631 | 24.370 | 357 | 227 | 6 | 33 | 353 | 2 | 351 | 2.37e-32 | 124 |
Msa0374270 | MtrunA17_Chr6g0460841 | 24.496 | 347 | 219 | 6 | 33 | 343 | 2 | 341 | 2.54e-32 | 124 |
Msa0374270 | MtrunA17_Chr3g0145801 | 21.493 | 335 | 217 | 12 | 2 | 304 | 394 | 714 | 1.28e-14 | 75.1 |
Msa0374270 | MtrunA17_Chr5g0404521 | 21.484 | 256 | 167 | 6 | 33 | 264 | 413 | 658 | 7.21e-14 | 72.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0374270 | AT1G77470.1 | 77.027 | 370 | 67 | 4 | 1 | 354 | 1 | 368 | 0.0 | 577 |
Msa0374270 | AT1G63160.1 | 38.365 | 318 | 185 | 4 | 34 | 347 | 17 | 327 | 2.83e-67 | 215 |
Msa0374270 | AT1G21690.1 | 38.671 | 331 | 183 | 6 | 34 | 350 | 11 | 335 | 5.20e-66 | 212 |
Msa0374270 | AT1G21690.3 | 48.402 | 219 | 106 | 3 | 34 | 245 | 11 | 229 | 8.37e-66 | 212 |
Msa0374270 | AT1G21690.4 | 38.485 | 330 | 178 | 6 | 34 | 350 | 11 | 328 | 2.29e-64 | 207 |
Msa0374270 | AT1G21690.2 | 38.369 | 331 | 172 | 7 | 34 | 350 | 11 | 323 | 4.75e-64 | 207 |
Msa0374270 | AT5G27740.1 | 26.705 | 352 | 205 | 8 | 33 | 343 | 2 | 341 | 8.03e-36 | 134 |
Msa0374270 | AT1G14460.1 | 23.404 | 235 | 156 | 4 | 36 | 249 | 426 | 657 | 1.85e-11 | 66.2 |
Msa0374270 | AT5G45720.2 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.86e-11 | 65.1 |
Msa0374270 | AT5G45720.1 | 22.026 | 227 | 159 | 5 | 34 | 245 | 345 | 568 | 3.88e-11 | 65.1 |
Msa0374270 | AT1G24290.1 | 31.739 | 230 | 129 | 11 | 36 | 249 | 105 | 322 | 4.62e-11 | 64.3 |
Msa0374270 | AT2G02480.2 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
Msa0374270 | AT2G02480.1 | 22.609 | 230 | 155 | 3 | 36 | 245 | 453 | 679 | 8.45e-11 | 63.9 |
Find 100 sgRNAs with CRISPR-Local
Find 543 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CACCTCTACGTAACGCAAAT+TGG | 0.189548 | 3_1:+73680067 | None:intergenic |
CCGAGAGAAATGGGGCTTAA+TGG | 0.221849 | 3_1:-73674257 | None:intergenic |
AGATATTTGCTCAATGTCTT+TGG | 0.248728 | 3_1:+73676276 | None:intergenic |
TGTTTCGTTTGTTTAACTTT+TGG | 0.262447 | 3_1:-73674308 | Msa0374270:three_prime_UTR |
CAGTAACACACAAGATTGTT+AGG | 0.277932 | 3_1:-73681760 | None:intergenic |
TATCTCGGTGCACATAAATT+AGG | 0.293780 | 3_1:+73674428 | None:intergenic |
TCAGTATCATAATATGATTT+TGG | 0.311016 | 3_1:-73681215 | Msa0374270:CDS |
ACATTGAGCAAATATCTTAC+TGG | 0.344071 | 3_1:-73676270 | Msa0374270:CDS |
TGCAGGTACAGATTAAGTTT+TGG | 0.348480 | 3_1:-73674590 | Msa0374270:intron |
TAAAATTGAACCGAGAGAAA+TGG | 0.361007 | 3_1:-73674267 | Msa0374270:three_prime_UTR |
CGTCAAACCCTCTGTAAAAC+TGG | 0.370275 | 3_1:-73680127 | Msa0374270:CDS |
AATCAAGATGCACCCGGTTT+CGG | 0.378472 | 3_1:-73679878 | Msa0374270:CDS |
AAAATTGAACCGAGAGAAAT+GGG | 0.378938 | 3_1:-73674266 | Msa0374270:three_prime_UTR |
GATATTTGCTCAATGTCTTT+GGG | 0.389281 | 3_1:+73676277 | None:intergenic |
GTGCATCTTGATTGCAGTGC+TGG | 0.392350 | 3_1:+73679888 | None:intergenic |
TTTCCGTTGTACATCGTAGA+AGG | 0.393244 | 3_1:-73674405 | Msa0374270:three_prime_UTR |
CTGCTGTTGTATGGTCCTCC+TGG | 0.395722 | 3_1:-73681289 | Msa0374270:CDS |
CAAGAGGGGCAAACCGAAAC+CGG | 0.396956 | 3_1:+73679865 | None:intergenic |
AGCACTCAGAGTCTATCATT+TGG | 0.402934 | 3_1:-73681130 | Msa0374270:CDS |
GCCACCGAAGGAAGGGTTAC+CGG | 0.403122 | 3_1:+73681523 | None:intergenic |
ACCTCTACGTAACGCAAATT+GGG | 0.410660 | 3_1:+73680068 | None:intergenic |
TGCTCAATGTCTTTGGGCAG+TGG | 0.410840 | 3_1:+73676283 | None:intergenic |
GCACTCAGAGTCTATCATTT+GGG | 0.412330 | 3_1:-73681129 | Msa0374270:intron |
AAAGGCACTGAATATTCTTC+AGG | 0.412974 | 3_1:-73677448 | Msa0374270:intron |
AATACTGGTGTAAAATCGTT+TGG | 0.419316 | 3_1:-73674356 | Msa0374270:three_prime_UTR |
GGTTATGTTGACTGCTCTGA+TGG | 0.433944 | 3_1:-73674335 | Msa0374270:three_prime_UTR |
AGTGCAGTTGGTGAATGATT+TGG | 0.434023 | 3_1:-73675949 | Msa0374270:CDS |
GTGGCTTATCTGCTCTTGTT+CGG | 0.434803 | 3_1:-73677491 | Msa0374270:CDS |
TGGTGCTAACAGCCTAATAC+TGG | 0.441635 | 3_1:-73674371 | Msa0374270:three_prime_UTR |
ACCAACTGCACTCGAACGGC+TGG | 0.444902 | 3_1:+73675960 | None:intergenic |
TTGTATGGTCCTCCTGGAAC+GGG | 0.453099 | 3_1:-73681283 | Msa0374270:CDS |
GCCGCCGGTAACCCTTCCTT+CGG | 0.453827 | 3_1:-73681527 | Msa0374270:CDS |
ATCAGTGCACCATCATATTC+AGG | 0.461846 | 3_1:+73674479 | None:intergenic |
TTTCAGTAAGAAAATAGAAA+TGG | 0.470080 | 3_1:+73681682 | None:intergenic |
TTACCCCATCTGCTGTTGTA+TGG | 0.471783 | 3_1:-73681298 | Msa0374270:CDS |
TCGGTGGCAAAGCTTCGCTA+TGG | 0.473250 | 3_1:-73681508 | Msa0374270:CDS |
ATTTCCAGTGCAAAGATAAA+CGG | 0.476730 | 3_1:+73676306 | None:intergenic |
CCATTAAGCCCCATTTCTCT+CGG | 0.484721 | 3_1:+73674257 | None:intergenic |
ACATCGTAGAAGGAGGCATC+AGG | 0.497206 | 3_1:-73674395 | Msa0374270:three_prime_UTR |
CGGTGGCAAAGCTTCGCTAT+GGG | 0.498078 | 3_1:-73681507 | Msa0374270:CDS |
GAAGCCGTTTATCTTTGCAC+TGG | 0.505763 | 3_1:-73676310 | Msa0374270:CDS |
GCAACATCGTCGAGGGATTG+AGG | 0.509495 | 3_1:+73681470 | None:intergenic |
GGCGGAGGAGACTTATCCTA+TGG | 0.511189 | 3_1:-73681585 | Msa0374270:CDS |
GTTGTATGGTCCTCCTGGAA+CGG | 0.512128 | 3_1:-73681284 | Msa0374270:CDS |
GCGGTGGCGCGAAAATTATA+CGG | 0.514722 | 3_1:-73681241 | Msa0374270:CDS |
CTGAATGCTTCAGATGATAG+AGG | 0.516669 | 3_1:-73681190 | Msa0374270:CDS |
TGAAGCAGATGCCATGACTA+AGG | 0.516889 | 3_1:-73680094 | Msa0374270:CDS |
GAAGCTTTGCCACCGAAGGA+AGG | 0.543002 | 3_1:+73681515 | None:intergenic |
TGCATCTTGATTGCAGTGCT+GGG | 0.544244 | 3_1:+73679889 | None:intergenic |
GCCGGTAACCCTTCCTTCGG+TGG | 0.549196 | 3_1:-73681524 | Msa0374270:CDS |
AGTAACACACAAGATTGTTA+GGG | 0.550275 | 3_1:-73681759 | None:intergenic |
GGCAAAACCGTCATTGCCGC+CGG | 0.553759 | 3_1:-73681542 | Msa0374270:CDS |
GCTCTTGTTCGGCTTAGCAA+TGG | 0.554174 | 3_1:-73677480 | Msa0374270:CDS |
GCCAGCCGTTCGAGTGCAGT+TGG | 0.554697 | 3_1:-73675961 | Msa0374270:CDS |
TGCAACGATAAGCTTCAGCT+TGG | 0.555547 | 3_1:-73674566 | Msa0374270:CDS |
AGGGTTACCGGCGGCAATGA+CGG | 0.559162 | 3_1:+73681535 | None:intergenic |
GAGGACCATACAACAGCAGA+TGG | 0.563295 | 3_1:+73681293 | None:intergenic |
GGGTTTAATAACCATGGCGG+AGG | 0.566041 | 3_1:-73681600 | Msa0374270:exon |
TAGCAATGGTGATATGAGAA+AGG | 0.575803 | 3_1:-73677466 | Msa0374270:CDS |
TACACGTGCTAGATCTGCAA+TGG | 0.578841 | 3_1:-73674525 | Msa0374270:CDS |
TCTGTGAAGTCGATGTCCAT+AGG | 0.581778 | 3_1:+73681569 | None:intergenic |
AAGCTTTGCCACCGAAGGAA+GGG | 0.581985 | 3_1:+73681516 | None:intergenic |
AAGAGGGGCAAACCGAAACC+GGG | 0.584016 | 3_1:+73679866 | None:intergenic |
TATGATATGAAAACAAGGAA+AGG | 0.587538 | 3_1:-73676126 | Msa0374270:CDS |
TATGAAAACAAGGAAAGGAC+TGG | 0.592837 | 3_1:-73676121 | Msa0374270:CDS |
AACTGCACTCGAACGGCTGG+CGG | 0.597817 | 3_1:+73675963 | None:intergenic |
GTGAGCTGCAACATCGTCGA+GGG | 0.599799 | 3_1:+73681463 | None:intergenic |
CACTGCAATCAAGATGCACC+CGG | 0.601545 | 3_1:-73679884 | Msa0374270:CDS |
TAGCGAAGCTTTGCCACCGA+AGG | 0.602957 | 3_1:+73681511 | None:intergenic |
GCACCATCATATTCAGGTGA+AGG | 0.603300 | 3_1:+73674485 | None:intergenic |
ATTCACCAACTGCACTCGAA+CGG | 0.603811 | 3_1:+73675956 | None:intergenic |
TGACATGGACAGCATCAAGA+GGG | 0.608265 | 3_1:+73679850 | None:intergenic |
AAATTGGGCATCCTTAGTCA+TGG | 0.619881 | 3_1:+73680083 | None:intergenic |
GCCCAATTTGCGTTACGTAG+AGG | 0.621180 | 3_1:-73680069 | Msa0374270:intron |
AACATGTTATCAATGCTGAA+AGG | 0.623395 | 3_1:-73679815 | Msa0374270:intron |
TAGTTAGGGTTTAATAACCA+TGG | 0.624202 | 3_1:-73681606 | Msa0374270:exon |
AGGATAAGTCTCCTCCGCCA+TGG | 0.624657 | 3_1:+73681589 | None:intergenic |
AGGACCATACAACAGCAGAT+GGG | 0.625782 | 3_1:+73681294 | None:intergenic |
TACTTGTGTCGACGATGTCG+CGG | 0.626145 | 3_1:+73681441 | None:intergenic |
GTTTCAGTCTCTCAGTGACA+TGG | 0.627168 | 3_1:+73679835 | None:intergenic |
CCGTTGTACATCGTAGAAGG+AGG | 0.629509 | 3_1:-73674402 | Msa0374270:three_prime_UTR |
TAACCTTCACCTGAATATGA+TGG | 0.629737 | 3_1:-73674488 | Msa0374270:three_prime_UTR |
GGACCATACAACAGCAGATG+GGG | 0.630103 | 3_1:+73681295 | None:intergenic |
GATGTACAACGGAAATATCT+CGG | 0.630765 | 3_1:+73674413 | None:intergenic |
GACATCGACTTCACAGACAA+GGG | 0.631926 | 3_1:-73681563 | Msa0374270:CDS |
GGACATCGACTTCACAGACA+AGG | 0.636430 | 3_1:-73681564 | Msa0374270:CDS |
GTGACATGGACAGCATCAAG+AGG | 0.637050 | 3_1:+73679849 | None:intergenic |
AGAAATATACAAAGAGCACT+AGG | 0.637557 | 3_1:-73679947 | Msa0374270:CDS |
AGGCTTGATGTTCAAGACAG+TGG | 0.638532 | 3_1:-73677510 | Msa0374270:CDS |
GAATATATGATATGAAAACA+AGG | 0.653141 | 3_1:-73676131 | Msa0374270:CDS |
AACATCGACGATTCTCGCGG+TGG | 0.654620 | 3_1:-73681257 | Msa0374270:CDS |
CGTAGAAGGAGGCATCAGGA+TGG | 0.659068 | 3_1:-73674391 | Msa0374270:three_prime_UTR |
GGTGAGCTGCAACATCGTCG+AGG | 0.664996 | 3_1:+73681462 | None:intergenic |
CCTCCTTCTACGATGTACAA+CGG | 0.678119 | 3_1:+73674402 | None:intergenic |
GACATGGACAGCATCAAGAG+GGG | 0.683891 | 3_1:+73679851 | None:intergenic |
ACCGAAGGAAGGGTTACCGG+CGG | 0.687119 | 3_1:+73681526 | None:intergenic |
TAAAACATCGACGATTCTCG+CGG | 0.694200 | 3_1:-73681260 | Msa0374270:CDS |
TTCTTCAGTAATCTGCTGAG+AGG | 0.704249 | 3_1:+73676330 | None:intergenic |
AAATTGAACCGAGAGAAATG+GGG | 0.746077 | 3_1:-73674265 | Msa0374270:three_prime_UTR |
TTAGGGTTTAATAACCATGG+CGG | 0.752952 | 3_1:-73681603 | Msa0374270:exon |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | TATATATATATATATATATA+TGG | + | chr3_1:73676593-73676612 | None:intergenic | 0.0% |
!! | ATAAAAATATTTATTCTATC+TGG | - | chr3_1:73678041-73678060 | Msa0374270:intron | 10.0% |
!! | AAAAAAAAAAAAAAAACTCA+AGG | + | chr3_1:73679440-73679459 | None:intergenic | 10.0% |
!!! | ATTGTTATTATTATTTTAGT+TGG | - | chr3_1:73679469-73679488 | Msa0374270:intron | 10.0% |
!! | ATATATTATAACTATTTGTA+AGG | - | chr3_1:73680190-73680209 | Msa0374270:intron | 10.0% |
! | GGGGGGGGGGGGGGGGGGGG+CGG | + | chr3_1:73680725-73680744 | None:intergenic | 100.0% |
! | CGGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:73680728-73680747 | None:intergenic | 100.0% |
!!! | AAAAGTTTTTACAAAGTAAA+CGG | + | chr3_1:73675185-73675204 | None:intergenic | 15.0% |
!! | AAAAGCCTATTAATTTAATT+AGG | - | chr3_1:73676496-73676515 | Msa0374270:intron | 15.0% |
!! | TATATTTGTGTTAACTATTA+AGG | - | chr3_1:73676695-73676714 | Msa0374270:intron | 15.0% |
!! | ACAATTGTAAAATTTATAGA+TGG | + | chr3_1:73676818-73676837 | None:intergenic | 15.0% |
!!! | ATGTGTAATATTTTATAAGT+TGG | - | chr3_1:73677558-73677577 | Msa0374270:intron | 15.0% |
!!! | TTTTGTTATTTATTAAAGTG+TGG | - | chr3_1:73677623-73677642 | Msa0374270:intron | 15.0% |
!!! | TTTGTTATTTATTAAAGTGT+GGG | - | chr3_1:73677624-73677643 | Msa0374270:intron | 15.0% |
!! | TATAATATTAGTATAACTTG+TGG | + | chr3_1:73677985-73678004 | None:intergenic | 15.0% |
!! | ATAAGTATGATTTAATGATT+TGG | + | chr3_1:73678108-73678127 | None:intergenic | 15.0% |
!! | TTTGTAAATAAGAAAACTTA+AGG | + | chr3_1:73678603-73678622 | None:intergenic | 15.0% |
!! | TATATGAAGATATTAAGAAA+AGG | + | chr3_1:73678641-73678660 | None:intergenic | 15.0% |
!! | TTCTTAATATCTTCATATAA+AGG | - | chr3_1:73678642-73678661 | Msa0374270:intron | 15.0% |
!! | TAAATTATATATCCTGAATT+CGG | - | chr3_1:73679323-73679342 | Msa0374270:intron | 15.0% |
!! | TTAATGCAAGAATTATAAAA+TGG | + | chr3_1:73679852-73679871 | None:intergenic | 15.0% |
!! | TTTCAGTAAGAAAATAGAAA+TGG | + | chr3_1:73674334-73674353 | None:intergenic | 20.0% |
!!! | TCAGTATCATAATATGATTT+TGG | - | chr3_1:73674798-73674817 | Msa0374270:intron | 20.0% |
!! | AATTTCATTAAAGTTGAACA+AGG | + | chr3_1:73675159-73675178 | None:intergenic | 20.0% |
!!! | AAAGTTTTTACAAAGTAAAC+GGG | + | chr3_1:73675184-73675203 | None:intergenic | 20.0% |
!! | AGAAGATAAAATGTTAGTTA+GGG | - | chr3_1:73675291-73675310 | Msa0374270:intron | 20.0% |
!!! | GTAAAACTAACACAAATTTT+AGG | - | chr3_1:73675420-73675439 | Msa0374270:intron | 20.0% |
!!! | AAATGTTTTCACAAAGTAAA+CGG | - | chr3_1:73675456-73675475 | Msa0374270:intron | 20.0% |
!! | ATAAAAGTGAAACAAGAATT+TGG | - | chr3_1:73675785-73675804 | Msa0374270:intron | 20.0% |
!! | TAAAAGTGAAACAAGAATTT+GGG | - | chr3_1:73675786-73675805 | Msa0374270:intron | 20.0% |
!! | GTCATACAAAATAATAATTG+TGG | + | chr3_1:73676654-73676673 | None:intergenic | 20.0% |
!! | ACAATAAATATCAAAGACTT+AGG | + | chr3_1:73677251-73677270 | None:intergenic | 20.0% |
!!! | TACTTTAGATGCTTTTTATT+TGG | - | chr3_1:73677322-73677341 | Msa0374270:intron | 20.0% |
!! | TAAATACTATGATGTGTAAT+AGG | - | chr3_1:73677346-73677365 | Msa0374270:intron | 20.0% |
!! | TTACACATCATAGTAAAAAA+GGG | + | chr3_1:73677546-73677565 | None:intergenic | 20.0% |
!! | ATTACACATCATAGTAAAAA+AGG | + | chr3_1:73677547-73677566 | None:intergenic | 20.0% |
!! | TCGATAATAATATGCTATAA+TGG | + | chr3_1:73677745-73677764 | None:intergenic | 20.0% |
!!! | ATTTTTATAAACTTTTGAGC+AGG | + | chr3_1:73678029-73678048 | None:intergenic | 20.0% |
!!! | TTCTAGTTATTAAGTTACTA+AGG | - | chr3_1:73678180-73678199 | Msa0374270:intron | 20.0% |
!!! | AAACATTGTTATTCCATTTT+GGG | - | chr3_1:73678433-73678452 | Msa0374270:intron | 20.0% |
!! | AAAAGAAACACAAATTTACA+AGG | + | chr3_1:73679370-73679389 | None:intergenic | 20.0% |
!!! | AAAGCAAAAAAATGTCATTT+AGG | + | chr3_1:73679638-73679657 | None:intergenic | 20.0% |
!! | ATATCAAATCCATCTATAAA+GGG | + | chr3_1:73679823-73679842 | None:intergenic | 20.0% |
!! | AATATCAAATCCATCTATAA+AGG | + | chr3_1:73679824-73679843 | None:intergenic | 20.0% |
!! | GAATATATGATATGAAAACA+AGG | - | chr3_1:73679882-73679901 | Msa0374270:CDS | 20.0% |
!! | GATCAATAAAATAAATTACC+AGG | + | chr3_1:73679982-73680001 | None:intergenic | 20.0% |
!! | TAACCTAAAAGCTTATTTAA+AGG | + | chr3_1:73680460-73680479 | None:intergenic | 20.0% |
!!! | ATGAATTTTACTCATAAACA+TGG | - | chr3_1:73681323-73681342 | Msa0374270:CDS | 20.0% |
!! | TTTTTGTGTGTTTAGTTGAT+AGG | - | chr3_1:73674674-73674693 | Msa0374270:intron | 25.0% |
! | ACATGCAAATTTACTACATA+AGG | + | chr3_1:73675004-73675023 | None:intergenic | 25.0% |
! | AAATTTGCATGTCAAATTTG+AGG | - | chr3_1:73675012-73675031 | Msa0374270:intron | 25.0% |
!!! | TTTGACTTGATTTGTTGTTA+TGG | - | chr3_1:73675038-73675057 | Msa0374270:intron | 25.0% |
!! | ATTTAACTTTGTGTCGAATA+AGG | - | chr3_1:73675097-73675116 | Msa0374270:intron | 25.0% |
! | GAGAAGATAAAATGTTAGTT+AGG | - | chr3_1:73675290-73675309 | Msa0374270:intron | 25.0% |
!! | AATACTGAAAACAGTTCTTT+TGG | - | chr3_1:73675330-73675349 | Msa0374270:intron | 25.0% |
!! | AATGTTTTCACAAAGTAAAC+GGG | - | chr3_1:73675457-73675476 | Msa0374270:intron | 25.0% |
! | TAAACATTAAAGACGATACA+AGG | - | chr3_1:73675633-73675652 | Msa0374270:intron | 25.0% |
!! | TTTGATAGTTAGAAAAGTTG+AGG | + | chr3_1:73675848-73675867 | None:intergenic | 25.0% |
!!! | AAGAATATGAAGAGTGTTAT+AGG | + | chr3_1:73676031-73676050 | None:intergenic | 25.0% |
! | TAAGTAAGTAATAACAGACA+GGG | + | chr3_1:73676231-73676250 | None:intergenic | 25.0% |
! | ATAAGTAAGTAATAACAGAC+AGG | + | chr3_1:73676232-73676251 | None:intergenic | 25.0% |
! | CTAATAACTATATTGACCTT+AGG | + | chr3_1:73676736-73676755 | None:intergenic | 25.0% |
! | TGAAATTTGTAACACAAACT+AGG | - | chr3_1:73676937-73676956 | Msa0374270:intron | 25.0% |
!! | TAATATGCACTTTCTTTTAG+TGG | - | chr3_1:73677270-73677289 | Msa0374270:intron | 25.0% |
!!! | AATATGCTATAATGGATTGA+AGG | + | chr3_1:73677737-73677756 | None:intergenic | 25.0% |
! | GTATATTCTCTTCATTATTC+AGG | - | chr3_1:73677936-73677955 | Msa0374270:intron | 25.0% |
! | TTATTCAGGAAGTTTAATTG+TGG | - | chr3_1:73677950-73677969 | Msa0374270:intron | 25.0% |
! | AATCAGACTAATCAACTAAA+AGG | + | chr3_1:73678132-73678151 | None:intergenic | 25.0% |
!!! | AGATTTTCTAAAATGTTGTG+AGG | - | chr3_1:73678211-73678230 | Msa0374270:intron | 25.0% |
!! | TACTGTCTTTTAATGTCAAA+TGG | - | chr3_1:73678294-73678313 | Msa0374270:intron | 25.0% |
! | GAAGCATAATATTGGAAATA+TGG | - | chr3_1:73678316-73678335 | Msa0374270:intron | 25.0% |
! | AATATTGGAAATATGGAAGA+TGG | - | chr3_1:73678323-73678342 | Msa0374270:intron | 25.0% |
! | TTCGACTGTTATAAAAAAAG+TGG | + | chr3_1:73678415-73678434 | None:intergenic | 25.0% |
!!! | GAAACATTGTTATTCCATTT+TGG | - | chr3_1:73678432-73678451 | Msa0374270:intron | 25.0% |
!!! | TAACGATTTTGAGTTTTACT+AGG | - | chr3_1:73678483-73678502 | Msa0374270:intron | 25.0% |
! | AATACAACTAGTCCTTTAAA+TGG | + | chr3_1:73678837-73678856 | None:intergenic | 25.0% |
! | AATACAACTAGTCCTTTAAA+TGG | + | chr3_1:73678837-73678856 | None:intergenic | 25.0% |
! | CTTGACTGAAACAAAAATTA+CGG | - | chr3_1:73679134-73679153 | Msa0374270:intron | 25.0% |
! | TCTATAAGCATTTATCGTTT+AGG | + | chr3_1:73679406-73679425 | None:intergenic | 25.0% |
! | ATACAAAGACACAATAATTC+AGG | + | chr3_1:73679607-73679626 | None:intergenic | 25.0% |
!! | TACTTTTATCCCTTTATAGA+TGG | - | chr3_1:73679811-73679830 | Msa0374270:intron | 25.0% |
! | TTCTTGCATTAATTTCAAAC+AGG | - | chr3_1:73679860-73679879 | Msa0374270:CDS | 25.0% |
! | TATGATATGAAAACAAGGAA+AGG | - | chr3_1:73679887-73679906 | Msa0374270:CDS | 25.0% |
! | AAAATAAATTACCAGGTAGT+TGG | + | chr3_1:73679975-73679994 | None:intergenic | 25.0% |
! | AGAATAGCACATAAAAAAGT+AGG | + | chr3_1:73680113-73680132 | None:intergenic | 25.0% |
! | AAAAAAACTTGAGCTTATGT+GGG | - | chr3_1:73680586-73680605 | Msa0374270:intron | 25.0% |
! | GAAAGAACAGAACAATAATT+TGG | - | chr3_1:73680659-73680678 | Msa0374270:intron | 25.0% |
! | TATCTTAAATTTGCAGAAAG+TGG | - | chr3_1:73680825-73680844 | Msa0374270:intron | 25.0% |
! | ATCTTAAATTTGCAGAAAGT+GGG | - | chr3_1:73680826-73680845 | Msa0374270:intron | 25.0% |
! | TATCTTAAATTTGCAGAAAG+TGG | - | chr3_1:73680825-73680844 | Msa0374270:intron | 25.0% |
! | ATCTTAAATTTGCAGAAAGT+GGG | - | chr3_1:73680826-73680845 | Msa0374270:intron | 25.0% |
! | TAGTAATTTATGAAAATGCC+CGG | - | chr3_1:73681124-73681143 | Msa0374270:intron | 25.0% |
! | ATATGTGTGCTTATCATAAT+TGG | - | chr3_1:73681384-73681403 | Msa0374270:intron | 25.0% |
! | GAATAAAATTTCATTGTTGC+AGG | - | chr3_1:73681406-73681425 | Msa0374270:intron | 25.0% |
!!! | TGTTTCGTTTGTTTAACTTT+TGG | - | chr3_1:73681705-73681724 | Msa0374270:five_prime_UTR | 25.0% |
!! | AACTAGTAGAGCTTTTTCTA+TGG | + | chr3_1:73674392-73674411 | None:intergenic | 30.0% |
TAGAAAAAGCTCTACTAGTT+AGG | - | chr3_1:73674392-73674411 | Msa0374270:three_prime_UTR | 30.0% | |
AGAAAAAGCTCTACTAGTTA+GGG | - | chr3_1:73674393-73674412 | Msa0374270:three_prime_UTR | 30.0% | |
TAGTTAGGGTTTAATAACCA+TGG | - | chr3_1:73674407-73674426 | Msa0374270:three_prime_UTR | 30.0% | |
ATAAACCCTAGAAATGAAAG+GGG | + | chr3_1:73674620-73674639 | None:intergenic | 30.0% | |
GATAAACCCTAGAAATGAAA+GGG | + | chr3_1:73674621-73674640 | None:intergenic | 30.0% | |
TGATAAACCCTAGAAATGAA+AGG | + | chr3_1:73674622-73674641 | None:intergenic | 30.0% | |
! | TCTAGGGTTTATCATTTCTT+CGG | - | chr3_1:73674628-73674647 | Msa0374270:intron | 30.0% |
! | TTTTGTGACTGCATAATAGA+TGG | - | chr3_1:73674956-73674975 | Msa0374270:intron | 30.0% |
TTAAATCGAAGCACATTTCA+CGG | + | chr3_1:73675083-73675102 | None:intergenic | 30.0% | |
! | TTTGAAATGAACCATTGTGA+TGG | - | chr3_1:73675266-73675285 | Msa0374270:intron | 30.0% |
TTGAAATGAACCATTGTGAT+GGG | - | chr3_1:73675267-73675286 | Msa0374270:intron | 30.0% | |
! | AGTTCTTTTGGCATTTTCAT+TGG | - | chr3_1:73675342-73675361 | Msa0374270:intron | 30.0% |
! | ATGAACAAGTGTGCATATTT+TGG | + | chr3_1:73675370-73675389 | None:intergenic | 30.0% |
!!! | GTTAGTTTTACTTGCTAACA+AGG | + | chr3_1:73675411-73675430 | None:intergenic | 30.0% |
! | ATGTTTTCACAAAGTAAACG+GGG | - | chr3_1:73675458-73675477 | Msa0374270:intron | 30.0% |
TCTATCTTCTTTCTGAATAC+CGG | - | chr3_1:73675553-73675572 | Msa0374270:intron | 30.0% | |
TTTCTGAATACCGGATAATT+CGG | - | chr3_1:73675562-73675581 | Msa0374270:intron | 30.0% | |
ATAAAAATGCCCGAATTATC+CGG | + | chr3_1:73675575-73675594 | None:intergenic | 30.0% | |
!! | AGTGTTGATATCAGCTTAAA+GGG | + | chr3_1:73675613-73675632 | None:intergenic | 30.0% |
!! | AAGTGTTGATATCAGCTTAA+AGG | + | chr3_1:73675614-73675633 | None:intergenic | 30.0% |
ATCATGTCTGAAAATTGACA+TGG | + | chr3_1:73675681-73675700 | None:intergenic | 30.0% | |
! | ATGTCAATTTTCAGACATGA+TGG | - | chr3_1:73675680-73675699 | Msa0374270:intron | 30.0% |
!! | AGAAATATACAAAGAGCACT+AGG | - | chr3_1:73676066-73676085 | Msa0374270:intron | 30.0% |
AACATGTTATCAATGCTGAA+AGG | - | chr3_1:73676198-73676217 | Msa0374270:intron | 30.0% | |
GCCTAACTCGTTTAATAAAT+GGG | - | chr3_1:73676455-73676474 | Msa0374270:intron | 30.0% | |
ACCCATTTATTAAACGAGTT+AGG | + | chr3_1:73676459-73676478 | None:intergenic | 30.0% | |
CCTGGCCTAATTAAATTAAT+AGG | + | chr3_1:73676504-73676523 | None:intergenic | 30.0% | |
CCTATTAATTTAATTAGGCC+AGG | - | chr3_1:73676501-73676520 | Msa0374270:intron | 30.0% | |
TAATATACTAGTATACCGAC+CGG | + | chr3_1:73676563-73676582 | None:intergenic | 30.0% | |
ATTGTGGTATGAGAATTTGA+AGG | + | chr3_1:73676638-73676657 | None:intergenic | 30.0% | |
!!! | CAAAGGCTTTATTTTAAGTC+TGG | + | chr3_1:73677010-73677029 | None:intergenic | 30.0% |
CTTAAAATAAAGCCTTTGAC+AGG | - | chr3_1:73677012-73677031 | Msa0374270:intron | 30.0% | |
ATACTATGATGTGTAATAGG+AGG | - | chr3_1:73677349-73677368 | Msa0374270:intron | 30.0% | |
TACTATGATGTGTAATAGGA+GGG | - | chr3_1:73677350-73677369 | Msa0374270:intron | 30.0% | |
!!! | GTGGGTATTTTTTATTAACG+CGG | - | chr3_1:73677642-73677661 | Msa0374270:intron | 30.0% |
!!! | TGGGTATTTTTTATTAACGC+GGG | - | chr3_1:73677643-73677662 | Msa0374270:intron | 30.0% |
!!! | ATTTTTTATTAACGCGGGTA+TGG | - | chr3_1:73677648-73677667 | Msa0374270:intron | 30.0% |
!!! | TTTTTTATTAACGCGGGTAT+GGG | - | chr3_1:73677649-73677668 | Msa0374270:intron | 30.0% |
!! | TATAATGGATTGAAGGCAAA+GGG | + | chr3_1:73677730-73677749 | None:intergenic | 30.0% |
TATTATCGAGTGTCCTTAAA+TGG | - | chr3_1:73677756-73677775 | Msa0374270:intron | 30.0% | |
AGTAAAACTGCAACCATTTA+AGG | + | chr3_1:73677772-73677791 | None:intergenic | 30.0% | |
! | GTCAAATGGAAGCATAATAT+TGG | - | chr3_1:73678308-73678327 | Msa0374270:intron | 30.0% |
!!! | TTGTTATTCCATTTTGGGAT+TGG | - | chr3_1:73678438-73678457 | Msa0374270:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | - | chr3_1:73678682-73678701 | Msa0374270:intron | 30.0% |
! | TCTTGTCTGAAACAAAAATC+AGG | - | chr3_1:73678773-73678792 | Msa0374270:intron | 30.0% |
! | CTTGTCTGAAACAAAAATCA+GGG | - | chr3_1:73678774-73678793 | Msa0374270:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | - | chr3_1:73678682-73678701 | Msa0374270:intron | 30.0% |
! | TCTTGTCTGAAACAAAAATC+AGG | - | chr3_1:73678773-73678792 | Msa0374270:intron | 30.0% |
! | CTTGTCTGAAACAAAAATCA+GGG | - | chr3_1:73678774-73678793 | Msa0374270:intron | 30.0% |
! | TGGAGAATCAAACTATTTTG+TGG | - | chr3_1:73678682-73678701 | Msa0374270:intron | 30.0% |
! | GGAGAATCAAACTATTTTGT+GGG | - | chr3_1:73678683-73678702 | Msa0374270:intron | 30.0% |
ATACTAAAACTGAGTAGTAC+TGG | + | chr3_1:73679077-73679096 | None:intergenic | 30.0% | |
! | AAGTTTGATTGTTTCTTGCA+TGG | - | chr3_1:73679519-73679538 | Msa0374270:intron | 30.0% |
TTCAGAACAGCTCTTAAATA+TGG | - | chr3_1:73679559-73679578 | Msa0374270:intron | 30.0% | |
! | TATTTTGCAGTCAACTCATA+TGG | - | chr3_1:73679660-73679679 | Msa0374270:intron | 30.0% |
ATTTCCAGTGCAAAGATAAA+CGG | + | chr3_1:73679710-73679729 | None:intergenic | 30.0% | |
GATATTTGCTCAATGTCTTT+GGG | + | chr3_1:73679739-73679758 | None:intergenic | 30.0% | |
AGATATTTGCTCAATGTCTT+TGG | + | chr3_1:73679740-73679759 | None:intergenic | 30.0% | |
ACATTGAGCAAATATCTTAC+TGG | - | chr3_1:73679743-73679762 | Msa0374270:intron | 30.0% | |
TTGATGAAAGACATGTTTGT+CGG | + | chr3_1:73680149-73680168 | None:intergenic | 30.0% | |
CTTGTTAATTGAGCGAATTA+GGG | + | chr3_1:73680319-73680338 | None:intergenic | 30.0% | |
TCTTGTTAATTGAGCGAATT+AGG | + | chr3_1:73680320-73680339 | None:intergenic | 30.0% | |
TTAGGCTATGAAAGGAAAAT+AGG | - | chr3_1:73680408-73680427 | Msa0374270:intron | 30.0% | |
! | AGGCCTTTAAATAAGCTTTT+AGG | - | chr3_1:73680454-73680473 | Msa0374270:intron | 30.0% |
AGGACATAAATACCTATCTT+AGG | - | chr3_1:73680534-73680553 | Msa0374270:intron | 30.0% | |
ACCTATCTTAGGTAACAAAT+CGG | - | chr3_1:73680545-73680564 | Msa0374270:intron | 30.0% | |
!!! | TCAAGTTTTTTTGCAAGTGT+TGG | + | chr3_1:73680578-73680597 | None:intergenic | 30.0% |
CAAAAAAACTTGAGCTTATG+TGG | - | chr3_1:73680585-73680604 | Msa0374270:intron | 30.0% | |
ATGATTGTGGTTGTTCAAAA+AGG | + | chr3_1:73680639-73680658 | None:intergenic | 30.0% | |
TGGATATCAGATTCTTAAAC+CGG | - | chr3_1:73680866-73680885 | Msa0374270:intron | 30.0% | |
TAGATACTAGATATGTAGCA+TGG | - | chr3_1:73681096-73681115 | Msa0374270:intron | 30.0% | |
TCATAAACATGGATCAATGA+TGG | - | chr3_1:73681334-73681353 | Msa0374270:intron | 30.0% | |
! | AACGATTTTACACCAGTATT+AGG | + | chr3_1:73681657-73681676 | None:intergenic | 30.0% |
AATACTGGTGTAAAATCGTT+TGG | - | chr3_1:73681657-73681676 | Msa0374270:five_prime_UTR | 30.0% | |
TAAAATTGAACCGAGAGAAA+TGG | - | chr3_1:73681746-73681765 | Msa0374270:five_prime_UTR | 30.0% | |
AAAATTGAACCGAGAGAAAT+GGG | - | chr3_1:73681747-73681766 | Msa0374270:five_prime_UTR | 30.0% | |
TTAGGGTTTAATAACCATGG+CGG | - | chr3_1:73674410-73674429 | Msa0374270:three_prime_UTR | 35.0% | |
TAACTTCCCCTTTCATTTCT+AGG | - | chr3_1:73674611-73674630 | Msa0374270:intron | 35.0% | |
AACTTCCCCTTTCATTTCTA+GGG | - | chr3_1:73674612-73674631 | Msa0374270:intron | 35.0% | |
! | TTCCTAACTTCCTTTTGTGT+GGG | - | chr3_1:73674917-73674936 | Msa0374270:intron | 35.0% |
! | ACAAGGAAAGCATGGATAAA+TGG | + | chr3_1:73675142-73675161 | None:intergenic | 35.0% |
AAAGTTGAACAAGGAAAGCA+TGG | + | chr3_1:73675150-73675169 | None:intergenic | 35.0% | |
TGAAATGAACCATTGTGATG+GGG | - | chr3_1:73675268-73675287 | Msa0374270:intron | 35.0% | |
TTCTGAATACCGGATAATTC+GGG | - | chr3_1:73675563-73675582 | Msa0374270:intron | 35.0% | |
! | GTGTTGATATCAGCTTAAAG+GGG | + | chr3_1:73675612-73675631 | None:intergenic | 35.0% |
TGAAAATTGACATGGACATG+AGG | + | chr3_1:73675673-73675692 | None:intergenic | 35.0% | |
! | AACAAGACCAGTTTTACAGA+GGG | + | chr3_1:73675896-73675915 | None:intergenic | 35.0% |
! | TAACAAGACCAGTTTTACAG+AGG | + | chr3_1:73675897-73675916 | None:intergenic | 35.0% |
AGTGTTATAGGTCAAGAAAC+TGG | + | chr3_1:73676019-73676038 | None:intergenic | 35.0% | |
AAACCCAATCCCAAAAATAC+GGG | + | chr3_1:73676351-73676370 | None:intergenic | 35.0% | |
CAAACCCAATCCCAAAAATA+CGG | + | chr3_1:73676352-73676371 | None:intergenic | 35.0% | |
!!! | GTATTTTTGGGATTGGGTTT+GGG | - | chr3_1:73676351-73676370 | Msa0374270:intron | 35.0% |
GGCCTAACTCGTTTAATAAA+TGG | - | chr3_1:73676454-73676473 | Msa0374270:intron | 35.0% | |
AATTTAATTAGGCCAGGCTT+AGG | - | chr3_1:73676507-73676526 | Msa0374270:intron | 35.0% | |
!!! | CTTTTTTATAAGCCTAAGCC+TGG | + | chr3_1:73676522-73676541 | None:intergenic | 35.0% |
AGTACGTTGCACAAATTGAA+AGG | - | chr3_1:73676886-73676905 | Msa0374270:intron | 35.0% | |
! | CACAAACTAGGCTTTTAAAC+AGG | - | chr3_1:73676949-73676968 | Msa0374270:intron | 35.0% |
! | AGGCTTTTAAACAGGCTAAT+AGG | - | chr3_1:73676957-73676976 | Msa0374270:intron | 35.0% |
!! | GCCAGACCAAACTTTTAAAA+AGG | - | chr3_1:73676979-73676998 | Msa0374270:intron | 35.0% |
!! | GCCTTTTTAAAAGTTTGGTC+TGG | + | chr3_1:73676983-73677002 | None:intergenic | 35.0% |
!! | ACCAAACTTTTAAAAAGGCC+AGG | - | chr3_1:73676984-73677003 | Msa0374270:intron | 35.0% |
TAAAGCCTTTGACAGGTAAA+AGG | - | chr3_1:73677019-73677038 | Msa0374270:intron | 35.0% | |
AAAAACTAAGGCCTAAGTCT+TGG | + | chr3_1:73677045-73677064 | None:intergenic | 35.0% | |
!!! | AGGCCTTAGTTTTTTCAACT+AGG | - | chr3_1:73677051-73677070 | Msa0374270:intron | 35.0% |
AGGCCTAGTTGAAAAAACTA+AGG | + | chr3_1:73677057-73677076 | None:intergenic | 35.0% | |
TAGCCTATTTAAGCAAAGCT+CGG | - | chr3_1:73677076-73677095 | Msa0374270:intron | 35.0% | |
AGTGTAGTCTATATAGTGTG+CGG | + | chr3_1:73677191-73677210 | None:intergenic | 35.0% | |
ACTATGATGTGTAATAGGAG+GGG | - | chr3_1:73677351-73677370 | Msa0374270:intron | 35.0% | |
!!! | TTACCCTGTTTTTACACAAG+AGG | + | chr3_1:73677447-73677466 | None:intergenic | 35.0% |
TCTTGTGTAAAAACAGGGTA+AGG | - | chr3_1:73677446-73677465 | Msa0374270:intron | 35.0% | |
! | TTTTTATTAACGCGGGTATG+GGG | - | chr3_1:73677650-73677669 | Msa0374270:intron | 35.0% |
!! | CTATAATGGATTGAAGGCAA+AGG | + | chr3_1:73677731-73677750 | None:intergenic | 35.0% |
GATGCAAACTTCTCGTATTA+TGG | + | chr3_1:73677862-73677881 | None:intergenic | 35.0% | |
! | AAGTTTAATTGTGGCTTGCA+TGG | - | chr3_1:73677959-73677978 | Msa0374270:intron | 35.0% |
CTAAAATGTTGTGAGGATTG+AGG | - | chr3_1:73678218-73678237 | Msa0374270:intron | 35.0% | |
TGTACCACACTATCACTTAA+TGG | + | chr3_1:73678246-73678265 | None:intergenic | 35.0% | |
AAGACAGTATGTGATTCACA+TGG | + | chr3_1:73678283-73678302 | None:intergenic | 35.0% | |
CAAGAAGTGAGACATTTCAA+AGG | + | chr3_1:73678369-73678388 | None:intergenic | 35.0% | |
!! | CTTTGAAATGTCTCACTTCT+TGG | - | chr3_1:73678367-73678386 | Msa0374270:intron | 35.0% |
TAGCAATGGTGATATGAGAA+AGG | - | chr3_1:73678547-73678566 | Msa0374270:intron | 35.0% | |
!! | AAAGGCACTGAATATTCTTC+AGG | - | chr3_1:73678565-73678584 | Msa0374270:intron | 35.0% |
! | AGGAGTAGTTGTATTTGTTG+TGG | - | chr3_1:73678662-73678681 | Msa0374270:intron | 35.0% |
TCGAGACAACATCCATTTAA+AGG | - | chr3_1:73678822-73678841 | Msa0374270:intron | 35.0% | |
!! | AGGACTAGTTGTATTTGTTG+TGG | - | chr3_1:73678842-73678861 | Msa0374270:intron | 35.0% |
TCGAGACAACATCCATTTAA+AGG | - | chr3_1:73678822-73678841 | Msa0374270:intron | 35.0% | |
!! | AGGACTAGTTGTATTTGTTG+TGG | - | chr3_1:73678842-73678861 | Msa0374270:intron | 35.0% |
TTACGGTAGCTAGATATACA+TGG | - | chr3_1:73679151-73679170 | Msa0374270:intron | 35.0% | |
TATATCCTGAATTCGGTACA+TGG | - | chr3_1:73679330-73679349 | Msa0374270:intron | 35.0% | |
AGAAAAATTGCGCTCAGATT+TGG | + | chr3_1:73679497-73679516 | None:intergenic | 35.0% | |
TATGAAAACAAGGAAAGGAC+TGG | - | chr3_1:73679892-73679911 | Msa0374270:CDS | 35.0% | |
!! | TTACACTTTGTTGTTGTCAC+AGG | - | chr3_1:73680006-73680025 | Msa0374270:intron | 35.0% |
TGATGAAAGACATGTTTGTC+GGG | + | chr3_1:73680148-73680167 | None:intergenic | 35.0% | |
AGAAAGTGGTATCTTATTGC+TGG | - | chr3_1:73680218-73680237 | Msa0374270:intron | 35.0% | |
GAAAGTGGTATCTTATTGCT+GGG | - | chr3_1:73680219-73680238 | Msa0374270:intron | 35.0% | |
ACAAGATAGATTGCACTCTA+AGG | - | chr3_1:73680334-73680353 | Msa0374270:intron | 35.0% | |
TAGCCTAATAAGAGTCAGTT+GGG | + | chr3_1:73680396-73680415 | None:intergenic | 35.0% | |
ATAGCCTAATAAGAGTCAGT+TGG | + | chr3_1:73680397-73680416 | None:intergenic | 35.0% | |
GACTCTTATTAGGCTATGAA+AGG | - | chr3_1:73680400-73680419 | Msa0374270:intron | 35.0% | |
TAAAGGCCTTACATATGTAC+AGG | + | chr3_1:73680443-73680462 | None:intergenic | 35.0% | |
AAGTCAATCTGTTACTGCTT+TGG | - | chr3_1:73680479-73680498 | Msa0374270:intron | 35.0% | |
ATTTATGTCCTTTCCAGTTG+AGG | + | chr3_1:73680525-73680544 | None:intergenic | 35.0% | |
CCTATCTTAGGTAACAAATC+GGG | - | chr3_1:73680546-73680565 | Msa0374270:intron | 35.0% | |
TATGTGGGCGATGTTTAAAT+TGG | - | chr3_1:73680601-73680620 | Msa0374270:intron | 35.0% | |
TGGTTGTTCAAAAAGGAATC+AGG | + | chr3_1:73680632-73680651 | None:intergenic | 35.0% | |
GTTCTGTTCTTTCATGATTG+TGG | + | chr3_1:73680652-73680671 | None:intergenic | 35.0% | |
TTTAAGAATCTGAAAACGGG+GGG | + | chr3_1:73680744-73680763 | None:intergenic | 35.0% | |
GTTTAAGAATCTGAAAACGG+GGG | + | chr3_1:73680745-73680764 | None:intergenic | 35.0% | |
GGTTTAAGAATCTGAAAACG+GGG | + | chr3_1:73680746-73680765 | None:intergenic | 35.0% | |
CGGTTTAAGAATCTGAAAAC+GGG | + | chr3_1:73680747-73680766 | None:intergenic | 35.0% | |
CCGGTTTAAGAATCTGAAAA+CGG | + | chr3_1:73680748-73680767 | None:intergenic | 35.0% | |
! | CCGTTTTCAGATTCTTAAAC+CGG | - | chr3_1:73680745-73680764 | Msa0374270:intron | 35.0% |
TAGTTGTACTGCATGCAATA+TGG | - | chr3_1:73680978-73680997 | Msa0374270:intron | 35.0% | |
CTAAGAACCAGAAAGAAAAC+AGG | + | chr3_1:73681360-73681379 | None:intergenic | 35.0% | |
! | TGCAGGTACAGATTAAGTTT+TGG | - | chr3_1:73681423-73681442 | Msa0374270:intron | 35.0% |
! | GCAGGTACAGATTAAGTTTT+GGG | - | chr3_1:73681424-73681443 | Msa0374270:intron | 35.0% |
TAACCTTCACCTGAATATGA+TGG | - | chr3_1:73681525-73681544 | Msa0374270:CDS | 35.0% | |
! | TATCTCGGTGCACATAAATT+AGG | + | chr3_1:73681588-73681607 | None:intergenic | 35.0% |
GATGTACAACGGAAATATCT+CGG | + | chr3_1:73681603-73681622 | None:intergenic | 35.0% | |
AAATTGAACCGAGAGAAATG+GGG | - | chr3_1:73681748-73681767 | Msa0374270:five_prime_UTR | 35.0% | |
ATGAAAGGGGAAGTTAGAGA+GGG | + | chr3_1:73674607-73674626 | None:intergenic | 40.0% | |
AATGAAAGGGGAAGTTAGAG+AGG | + | chr3_1:73674608-73674627 | None:intergenic | 40.0% | |
TAAAACATCGACGATTCTCG+CGG | - | chr3_1:73674753-73674772 | Msa0374270:intron | 40.0% | |
CTGAATGCTTCAGATGATAG+AGG | - | chr3_1:73674823-73674842 | Msa0374270:intron | 40.0% | |
AGCACTCAGAGTCTATCATT+TGG | - | chr3_1:73674883-73674902 | Msa0374270:intron | 40.0% | |
GCACTCAGAGTCTATCATTT+GGG | - | chr3_1:73674884-73674903 | Msa0374270:intron | 40.0% | |
! | CTTCCTAACTTCCTTTTGTG+TGG | - | chr3_1:73674916-73674935 | Msa0374270:intron | 40.0% |
CAGTAAAACACCCACACAAA+AGG | + | chr3_1:73674930-73674949 | None:intergenic | 40.0% | |
TTATCTTCTCCCCATCACAA+TGG | + | chr3_1:73675280-73675299 | None:intergenic | 40.0% | |
TATCATTCCATCAGCCAATG+CGG | - | chr3_1:73675520-73675539 | Msa0374270:intron | 40.0% | |
TAGATATAGAACCTCCGCAT+TGG | + | chr3_1:73675537-73675556 | None:intergenic | 40.0% | |
AAAGCACATGCAAGCAGAAA+GGG | + | chr3_1:73675747-73675766 | None:intergenic | 40.0% | |
! | AAAAGCACATGCAAGCAGAA+AGG | + | chr3_1:73675748-73675767 | None:intergenic | 40.0% |
! | TGCTTGCATGTGCTTTTGAT+TGG | - | chr3_1:73675751-73675770 | Msa0374270:intron | 40.0% |
!! | GCTTGCATGTGCTTTTGATT+GGG | - | chr3_1:73675752-73675771 | Msa0374270:intron | 40.0% |
AAATTGGGCATCCTTAGTCA+TGG | + | chr3_1:73675933-73675952 | None:intergenic | 40.0% | |
ACCTCTACGTAACGCAAATT+GGG | + | chr3_1:73675948-73675967 | None:intergenic | 40.0% | |
TTGAGCTACATTCTCACGAT+GGG | - | chr3_1:73676315-73676334 | Msa0374270:CDS | 40.0% | |
! | GGGTAAACACCCGTATTTTT+GGG | - | chr3_1:73676339-73676358 | Msa0374270:CDS | 40.0% |
!!! | AACACCCGTATTTTTGGGAT+TGG | - | chr3_1:73676344-73676363 | Msa0374270:CDS | 40.0% |
!!! | ACACCCGTATTTTTGGGATT+GGG | - | chr3_1:73676345-73676364 | Msa0374270:CDS | 40.0% |
!!! | CGTATTTTTGGGATTGGGTT+TGG | - | chr3_1:73676350-73676369 | Msa0374270:intron | 40.0% |
TTGGGTAATTACCCGCAAAT+AGG | - | chr3_1:73676369-73676388 | Msa0374270:intron | 40.0% | |
TGGGTAATTACCCGCAAATA+GGG | - | chr3_1:73676370-73676389 | Msa0374270:intron | 40.0% | |
! | GCTTGCTACTAATATGCCTA+AGG | - | chr3_1:73676717-73676736 | Msa0374270:intron | 40.0% |
!! | GCCTGGCCTTTTTAAAAGTT+TGG | + | chr3_1:73676988-73677007 | None:intergenic | 40.0% |
!!! | GCTTTATTTTAAGTCTGGCC+TGG | + | chr3_1:73677005-73677024 | None:intergenic | 40.0% |
GAGCTTTGCTTAAATAGGCT+AGG | + | chr3_1:73677077-73677096 | None:intergenic | 40.0% | |
TATTTAAGCAAAGCTCGGCT+CGG | - | chr3_1:73677081-73677100 | Msa0374270:intron | 40.0% | |
CCATTCAAATTTGCGAGTAG+GGG | + | chr3_1:73677122-73677141 | None:intergenic | 40.0% | |
CCCATTCAAATTTGCGAGTA+GGG | + | chr3_1:73677123-73677142 | None:intergenic | 40.0% | |
CCCTACTCGCAAATTTGAAT+GGG | - | chr3_1:73677120-73677139 | Msa0374270:intron | 40.0% | |
ACCCATTCAAATTTGCGAGT+AGG | + | chr3_1:73677124-73677143 | None:intergenic | 40.0% | |
AAATTTGAATGGGTGTGGTG+CGG | - | chr3_1:73677130-73677149 | Msa0374270:intron | 40.0% | |
GTGTAGTCTATATAGTGTGC+GGG | + | chr3_1:73677190-73677209 | None:intergenic | 40.0% | |
GTTGTTGTCATGTGACTGTA+AGG | - | chr3_1:73677396-73677415 | Msa0374270:intron | 40.0% | |
ACAGCCTCTTGTGTAAAAAC+AGG | - | chr3_1:73677440-73677459 | Msa0374270:intron | 40.0% | |
CAGCCTCTTGTGTAAAAACA+GGG | - | chr3_1:73677441-73677460 | Msa0374270:intron | 40.0% | |
CGTACAATACACCAAATGGT+GGG | - | chr3_1:73677472-73677491 | Msa0374270:CDS | 40.0% | |
CATAGTAAAAAAGGGCAACC+CGG | + | chr3_1:73677538-73677557 | None:intergenic | 40.0% | |
! | GGAACCATTAAGTGATAGTG+TGG | - | chr3_1:73678239-73678258 | Msa0374270:intron | 40.0% |
GATGGTAATACATGCTGATC+TGG | - | chr3_1:73678341-73678360 | Msa0374270:intron | 40.0% | |
GCAAGTTACCAATCCCAAAA+TGG | + | chr3_1:73678449-73678468 | None:intergenic | 40.0% | |
!! | CAGGGAAGCTTGTTATAACA+TGG | - | chr3_1:73678792-73678811 | Msa0374270:intron | 40.0% |
!! | CAGGGAAGCTTGTTATAACA+TGG | - | chr3_1:73678792-73678811 | Msa0374270:intron | 40.0% |
!! | ATTAGCACACTTGTTGACTC+AGG | + | chr3_1:73679183-73679202 | None:intergenic | 40.0% |
TAAGACCATGTACCGAATTC+AGG | + | chr3_1:73679338-73679357 | None:intergenic | 40.0% | |
TTCTTCAGTAATCTGCTGAG+AGG | + | chr3_1:73679686-73679705 | None:intergenic | 40.0% | |
TTACCAGGTAGTTGGATGTT+AGG | + | chr3_1:73679967-73679986 | None:intergenic | 40.0% | |
!! | AGTGCAGTTGGTGAATGATT+TGG | - | chr3_1:73680064-73680083 | Msa0374270:intron | 40.0% |
TTTGTAAGGCTGAGAGAAAG+TGG | - | chr3_1:73680204-73680223 | Msa0374270:intron | 40.0% | |
GTATCTTATTGCTGGGAACA+GGG | - | chr3_1:73680226-73680245 | Msa0374270:intron | 40.0% | |
! | AATTAGGGCCTTTTGGCATT+GGG | + | chr3_1:73680304-73680323 | None:intergenic | 40.0% |
AGTTGGGTAGTTAGAAAGCA+AGG | + | chr3_1:73680380-73680399 | None:intergenic | 40.0% | |
! | CTACCCAACTGACTCTTATT+AGG | - | chr3_1:73680390-73680409 | Msa0374270:intron | 40.0% |
!! | CCCGATTTGTTACCTAAGAT+AGG | + | chr3_1:73680549-73680568 | None:intergenic | 40.0% |
TTAGGTAACAAATCGGGCTA+TGG | - | chr3_1:73680552-73680571 | Msa0374270:intron | 40.0% | |
TTAAGAATCTGAAAACGGGG+GGG | + | chr3_1:73680743-73680762 | None:intergenic | 40.0% | |
ACAGCTACGTATACATGTAC+CGG | + | chr3_1:73680767-73680786 | None:intergenic | 40.0% | |
ACAGCTACGTATACATGTAC+CGG | + | chr3_1:73680767-73680786 | None:intergenic | 40.0% | |
AGGTGTACAAATGGTCATTC+AGG | + | chr3_1:73681040-73681059 | None:intergenic | 40.0% | |
CACACAAGTAGGTGTACAAA+TGG | + | chr3_1:73681049-73681068 | None:intergenic | 40.0% | |
AGGGGATATGTCTATATTCC+GGG | + | chr3_1:73681145-73681164 | None:intergenic | 40.0% | |
CAGGGGATATGTCTATATTC+CGG | + | chr3_1:73681146-73681165 | None:intergenic | 40.0% | |
GTCAGATGAAGCCAAATTTC+AGG | + | chr3_1:73681240-73681259 | None:intergenic | 40.0% | |
TCTAGCACATACATAACGAC+TGG | + | chr3_1:73681262-73681281 | None:intergenic | 40.0% | |
! | ATGATGGCCTGTTTTCTTTC+TGG | - | chr3_1:73681350-73681369 | Msa0374270:intron | 40.0% |
ATCAGTGCACCATCATATTC+AGG | + | chr3_1:73681537-73681556 | None:intergenic | 40.0% | |
TTTCCGTTGTACATCGTAGA+AGG | - | chr3_1:73681608-73681627 | Msa0374270:exon | 40.0% | |
!! | AGGGAAGACTGTGTTTTGAG+CGG | - | chr3_1:73674273-73674292 | Msa0374270:three_prime_UTR | 45.0% |
TCTGTGAAGTCGATGTCCAT+AGG | + | chr3_1:73674447-73674466 | None:intergenic | 45.0% | |
!! | GACATCGACTTCACAGACAA+GGG | - | chr3_1:73674450-73674469 | Msa0374270:three_prime_UTR | 45.0% |
TTACCCCATCTGCTGTTGTA+TGG | - | chr3_1:73674715-73674734 | Msa0374270:intron | 45.0% | |
AGGACCATACAACAGCAGAT+GGG | + | chr3_1:73674722-73674741 | None:intergenic | 45.0% | |
CACCCACACAAAAGGAAGTT+AGG | + | chr3_1:73674922-73674941 | None:intergenic | 45.0% | |
TCGAAGCACATTTCACGGTA+TGG | + | chr3_1:73675078-73675097 | None:intergenic | 45.0% | |
CGCTAATTACTGCTGAACTC+TGG | + | chr3_1:73675484-73675503 | None:intergenic | 45.0% | |
GAGTTCAGCAGTAATTAGCG+TGG | - | chr3_1:73675484-73675503 | Msa0374270:intron | 45.0% | |
CGTCAAACCCTCTGTAAAAC+TGG | - | chr3_1:73675886-73675905 | Msa0374270:intron | 45.0% | |
TGAAGCAGATGCCATGACTA+AGG | - | chr3_1:73675919-73675938 | Msa0374270:intron | 45.0% | |
CACCTCTACGTAACGCAAAT+TGG | + | chr3_1:73675949-73675968 | None:intergenic | 45.0% | |
TGCATCTTGATTGCAGTGCT+GGG | + | chr3_1:73676127-73676146 | None:intergenic | 45.0% | |
AATCAAGATGCACCCGGTTT+CGG | - | chr3_1:73676135-73676154 | Msa0374270:intron | 45.0% | |
TGACATGGACAGCATCAAGA+GGG | + | chr3_1:73676166-73676185 | None:intergenic | 45.0% | |
GTTTCAGTCTCTCAGTGACA+TGG | + | chr3_1:73676181-73676200 | None:intergenic | 45.0% | |
GTTGAGCTACATTCTCACGA+TGG | - | chr3_1:73676314-73676333 | Msa0374270:CDS | 45.0% | |
! | CGGGTAAACACCCGTATTTT+TGG | - | chr3_1:73676338-73676357 | Msa0374270:CDS | 45.0% |
GGGTAATTACCCGCAAATAG+GGG | - | chr3_1:73676371-73676390 | Msa0374270:intron | 45.0% | |
TAATTACCCGCAAATAGGGG+TGG | - | chr3_1:73676374-73676393 | Msa0374270:intron | 45.0% | |
AATTACCCGCAAATAGGGGT+GGG | - | chr3_1:73676375-73676394 | Msa0374270:intron | 45.0% | |
AAAAGCCTATCAAGCCTACC+AGG | - | chr3_1:73676537-73676556 | Msa0374270:intron | 45.0% | |
!! | CTTGGCCTTTTACCTGTCAA+AGG | + | chr3_1:73677027-73677046 | None:intergenic | 45.0% |
CAGGTAAAAGGCCAAGACTT+AGG | - | chr3_1:73677031-73677050 | Msa0374270:intron | 45.0% | |
GAGCCGAGCTTTGCTTAAAT+AGG | + | chr3_1:73677082-73677101 | None:intergenic | 45.0% | |
TCAAATTTGCGAGTAGGGGT+GGG | + | chr3_1:73677118-73677137 | None:intergenic | 45.0% | |
TTCAAATTTGCGAGTAGGGG+TGG | + | chr3_1:73677119-73677138 | None:intergenic | 45.0% | |
CCCCTACTCGCAAATTTGAA+TGG | - | chr3_1:73677119-73677138 | Msa0374270:intron | 45.0% | |
CTCGCAAATTTGAATGGGTG+TGG | - | chr3_1:73677125-73677144 | Msa0374270:intron | 45.0% | |
AATTTGAATGGGTGTGGTGC+GGG | - | chr3_1:73677131-73677150 | Msa0374270:intron | 45.0% | |
TGTAATAGGAGGGGTAACCT+TGG | - | chr3_1:73677360-73677379 | Msa0374270:intron | 45.0% | |
CAACTTTACCAGTTGAGCCA+AGG | + | chr3_1:73677380-73677399 | None:intergenic | 45.0% | |
GTCATGTGACTGTAAGGTCA+CGG | - | chr3_1:73677402-73677421 | Msa0374270:intron | 45.0% | |
TCATGTGACTGTAAGGTCAC+GGG | - | chr3_1:73677403-73677422 | Msa0374270:intron | 45.0% | |
GCTGCGTACAATACACCAAA+TGG | - | chr3_1:73677468-73677487 | Msa0374270:CDS | 45.0% | |
GCGTACAATACACCAAATGG+TGG | - | chr3_1:73677471-73677490 | Msa0374270:CDS | 45.0% | |
TAGTAAGTACCCTGCCGAAA+GGG | - | chr3_1:73677683-73677702 | Msa0374270:intron | 45.0% | |
AAGGCAAAGGGATCTGTATG+TGG | + | chr3_1:73677718-73677737 | None:intergenic | 45.0% | |
TGCATGTGCATTTCAACTGC+TGG | - | chr3_1:73678078-73678097 | Msa0374270:intron | 45.0% | |
AGGCTTGATGTTCAAGACAG+TGG | - | chr3_1:73678503-73678522 | Msa0374270:intron | 45.0% | |
GTGGCTTATCTGCTCTTGTT+CGG | - | chr3_1:73678522-73678541 | Msa0374270:intron | 45.0% | |
! | GGCACTGAATATTCTTCAGG+TGG | - | chr3_1:73678568-73678587 | Msa0374270:intron | 45.0% |
TGTGTGAATGCAAGCGAAAG+GGG | + | chr3_1:73678745-73678764 | None:intergenic | 45.0% | |
GTGTGTGAATGCAAGCGAAA+GGG | + | chr3_1:73678746-73678765 | None:intergenic | 45.0% | |
TGTGTGTGAATGCAAGCGAA+AGG | + | chr3_1:73678747-73678766 | None:intergenic | 45.0% | |
TCGCTTGCATTCACACACAA+TGG | - | chr3_1:73678748-73678767 | Msa0374270:intron | 45.0% | |
TGTGTGAATGCAAGCGAAAG+GGG | + | chr3_1:73678745-73678764 | None:intergenic | 45.0% | |
GTGTGTGAATGCAAGCGAAA+GGG | + | chr3_1:73678746-73678765 | None:intergenic | 45.0% | |
TGTGTGTGAATGCAAGCGAA+AGG | + | chr3_1:73678747-73678766 | None:intergenic | 45.0% | |
TCGCTTGCATTCACACACAA+TGG | - | chr3_1:73678748-73678767 | Msa0374270:intron | 45.0% | |
TGTGTCAATGCACACGACAT+GGG | + | chr3_1:73679105-73679124 | None:intergenic | 45.0% | |
! | TCGTGTGCATTGACACACTT+CGG | - | chr3_1:73679108-73679127 | Msa0374270:intron | 45.0% |
GAAGCCGTTTATCTTTGCAC+TGG | - | chr3_1:73679703-73679722 | Msa0374270:intron | 45.0% | |
CATCCTAACATCCAACTACC+TGG | - | chr3_1:73679961-73679980 | Msa0374270:intron | 45.0% | |
ATTCACCAACTGCACTCGAA+CGG | + | chr3_1:73680060-73680079 | None:intergenic | 45.0% | |
TGTTTGTCGGGTCAAGCATA+AGG | + | chr3_1:73680136-73680155 | None:intergenic | 45.0% | |
GGTATCTTATTGCTGGGAAC+AGG | - | chr3_1:73680225-73680244 | Msa0374270:intron | 45.0% | |
! | TCCACGCTGACTACAAACAA+TGG | - | chr3_1:73680254-73680273 | Msa0374270:intron | 45.0% |
! | GAATTAGGGCCTTTTGGCAT+TGG | + | chr3_1:73680305-73680324 | None:intergenic | 45.0% |
! | TTGAGCGAATTAGGGCCTTT+TGG | + | chr3_1:73680311-73680330 | None:intergenic | 45.0% |
! | CAAGGCATGTTGCTTAAGAG+GGG | + | chr3_1:73680362-73680381 | None:intergenic | 45.0% |
! | GCAAGGCATGTTGCTTAAGA+GGG | + | chr3_1:73680363-73680382 | None:intergenic | 45.0% |
! | AGCAAGGCATGTTGCTTAAG+AGG | + | chr3_1:73680364-73680383 | None:intergenic | 45.0% |
GAAAGGAAAATAGGCTCCTC+AGG | - | chr3_1:73680417-73680436 | Msa0374270:intron | 45.0% | |
CTTACATATGTACAGGCCTG+AGG | + | chr3_1:73680436-73680455 | None:intergenic | 45.0% | |
CTCAGGCCTGTACATATGTA+AGG | - | chr3_1:73680434-73680453 | Msa0374270:intron | 45.0% | |
TAAGAATCTGAAAACGGGGG+GGG | + | chr3_1:73680742-73680761 | None:intergenic | 45.0% | |
GAACGACAAAGCACACAAGT+AGG | + | chr3_1:73681060-73681079 | None:intergenic | 45.0% | |
! | ATTAAGTCTGAAGTGGGGTG+AGG | + | chr3_1:73681177-73681196 | None:intergenic | 45.0% |
! | GGGACATTAAGTCTGAAGTG+GGG | + | chr3_1:73681182-73681201 | None:intergenic | 45.0% |
! | CGGGACATTAAGTCTGAAGT+GGG | + | chr3_1:73681183-73681202 | None:intergenic | 45.0% |
ACGGGACATTAAGTCTGAAG+TGG | + | chr3_1:73681184-73681203 | None:intergenic | 45.0% | |
GAAGCCAAATTTCAGGCACT+CGG | + | chr3_1:73681233-73681252 | None:intergenic | 45.0% | |
TGCAACGATAAGCTTCAGCT+TGG | - | chr3_1:73681447-73681466 | Msa0374270:CDS | 45.0% | |
TACACGTGCTAGATCTGCAA+TGG | - | chr3_1:73681488-73681507 | Msa0374270:CDS | 45.0% | |
GCACCATCATATTCAGGTGA+AGG | + | chr3_1:73681531-73681550 | None:intergenic | 45.0% | |
CCTCCTTCTACGATGTACAA+CGG | + | chr3_1:73681614-73681633 | None:intergenic | 45.0% | |
! | TGGTGCTAACAGCCTAATAC+TGG | - | chr3_1:73681642-73681661 | Msa0374270:five_prime_UTR | 45.0% |
! | GGTTATGTTGACTGCTCTGA+TGG | - | chr3_1:73681678-73681697 | Msa0374270:five_prime_UTR | 45.0% |
!! | ATAATAATAACAATAATAAA+TGG | + | chr3_1:73679463-73679482 | None:intergenic | 5.0% |
!! | GGGAAGACTGTGTTTTGAGC+GGG | - | chr3_1:73674274-73674293 | Msa0374270:three_prime_UTR | 50.0% |
GGGTTTAATAACCATGGCGG+AGG | - | chr3_1:73674413-73674432 | Msa0374270:three_prime_UTR | 50.0% | |
!! | GGACATCGACTTCACAGACA+AGG | - | chr3_1:73674449-73674468 | Msa0374270:three_prime_UTR | 50.0% |
AAGCTTTGCCACCGAAGGAA+GGG | + | chr3_1:73674500-73674519 | None:intergenic | 50.0% | |
! | TACTTGTGTCGACGATGTCG+CGG | + | chr3_1:73674575-73674594 | None:intergenic | 50.0% |
GGGGAAGTTAGAGAGGGAAA+GGG | + | chr3_1:73674601-73674620 | None:intergenic | 50.0% | |
AGGGGAAGTTAGAGAGGGAA+AGG | + | chr3_1:73674602-73674621 | None:intergenic | 50.0% | |
GGACCATACAACAGCAGATG+GGG | + | chr3_1:73674721-73674740 | None:intergenic | 50.0% | |
GAGGACCATACAACAGCAGA+TGG | + | chr3_1:73674723-73674742 | None:intergenic | 50.0% | |
GTTGTATGGTCCTCCTGGAA+CGG | - | chr3_1:73674729-73674748 | Msa0374270:intron | 50.0% | |
TTGTATGGTCCTCCTGGAAC+GGG | - | chr3_1:73674730-73674749 | Msa0374270:intron | 50.0% | |
! | GATGTTTTACCCGTTCCAGG+AGG | + | chr3_1:73674742-73674761 | None:intergenic | 50.0% |
! | GTCGATGTTTTACCCGTTCC+AGG | + | chr3_1:73674745-73674764 | None:intergenic | 50.0% |
GCGGTGGCGCGAAAATTATA+CGG | - | chr3_1:73674772-73674791 | Msa0374270:intron | 50.0% | |
GCCCAATTTGCGTTACGTAG+AGG | - | chr3_1:73675944-73675963 | Msa0374270:CDS | 50.0% | |
GTGCATCTTGATTGCAGTGC+TGG | + | chr3_1:73676128-73676147 | None:intergenic | 50.0% | |
CACTGCAATCAAGATGCACC+CGG | - | chr3_1:73676129-73676148 | Msa0374270:CDS | 50.0% | |
GACATGGACAGCATCAAGAG+GGG | + | chr3_1:73676165-73676184 | None:intergenic | 50.0% | |
GTGACATGGACAGCATCAAG+AGG | + | chr3_1:73676167-73676186 | None:intergenic | 50.0% | |
AGCTACATTCTCACGATGGG+CGG | - | chr3_1:73676318-73676337 | Msa0374270:CDS | 50.0% | |
CTATTCCCACCCCTATTTGC+GGG | + | chr3_1:73676383-73676402 | None:intergenic | 50.0% | |
CCTATTCCCACCCCTATTTG+CGG | + | chr3_1:73676384-73676403 | None:intergenic | 50.0% | |
! | CTTTTAGTAGGCCGAGCCAT+AGG | + | chr3_1:73676426-73676445 | None:intergenic | 50.0% |
! | TCTATATAGTGTGCGGGCTG+CGG | + | chr3_1:73677184-73677203 | None:intergenic | 50.0% |
AAGGTCACGGGTTCAAGTCT+TGG | - | chr3_1:73677415-73677434 | Msa0374270:intron | 50.0% | |
CTGAAGCTCCCGCATATGTA+GGG | + | chr3_1:73677511-73677530 | None:intergenic | 50.0% | |
ACTGAAGCTCCCGCATATGT+AGG | + | chr3_1:73677512-73677531 | None:intergenic | 50.0% | |
TATTAACGCGGGTATGGGGA+TGG | - | chr3_1:73677654-73677673 | Msa0374270:intron | 50.0% | |
ATTAACGCGGGTATGGGGAT+GGG | - | chr3_1:73677655-73677674 | Msa0374270:intron | 50.0% | |
GTAGTAAGTACCCTGCCGAA+AGG | - | chr3_1:73677682-73677701 | Msa0374270:intron | 50.0% | |
AGGGATCTGTATGTGGCACA+GGG | + | chr3_1:73677711-73677730 | None:intergenic | 50.0% | |
AAGGGATCTGTATGTGGCAC+AGG | + | chr3_1:73677712-73677731 | None:intergenic | 50.0% | |
GCTCTTGTTCGGCTTAGCAA+TGG | - | chr3_1:73678533-73678552 | Msa0374270:intron | 50.0% | |
GTGTGAATGCAAGCGAAAGG+GGG | + | chr3_1:73678744-73678763 | None:intergenic | 50.0% | |
GTGTGAATGCAAGCGAAAGG+GGG | + | chr3_1:73678744-73678763 | None:intergenic | 50.0% | |
GTGTCAATGCACACGACATG+GGG | + | chr3_1:73679104-73679123 | None:intergenic | 50.0% | |
GTGTGTCAATGCACACGACA+TGG | + | chr3_1:73679106-73679125 | None:intergenic | 50.0% | |
TGCTCAATGTCTTTGGGCAG+TGG | + | chr3_1:73679733-73679752 | None:intergenic | 50.0% | |
GCCATTGTTTGTAGTCAGCG+TGG | + | chr3_1:73680258-73680277 | None:intergenic | 50.0% | |
TGAGTAGCCTGAACCTCAAC+TGG | - | chr3_1:73680509-73680528 | Msa0374270:intron | 50.0% | |
AGCCTGAACCTCAACTGGAA+AGG | - | chr3_1:73680514-73680533 | Msa0374270:intron | 50.0% | |
GTCCTTTCCAGTTGAGGTTC+AGG | + | chr3_1:73680519-73680538 | None:intergenic | 50.0% | |
AAGAATCTGAAAACGGGGGG+GGG | + | chr3_1:73680741-73680760 | None:intergenic | 50.0% | |
GGGAAGAGCTACTATGCAAC+TGG | - | chr3_1:73680846-73680865 | Msa0374270:intron | 50.0% | |
TTTGTCGTTCTCACGCGTCT+AGG | - | chr3_1:73681070-73681089 | Msa0374270:intron | 50.0% | |
TGGGGTGAGGAGAAAGAACA+GGG | + | chr3_1:73681164-73681183 | None:intergenic | 50.0% | |
AAAGAAGGACGACGCTGCAA+CGG | + | chr3_1:73681203-73681222 | None:intergenic | 50.0% | |
! | AGCGTCGTCCTTCTTTTCAG+TGG | - | chr3_1:73681207-73681226 | Msa0374270:CDS | 50.0% |
CCGTTGTACATCGTAGAAGG+AGG | - | chr3_1:73681611-73681630 | Msa0374270:five_prime_UTR | 50.0% | |
!! | ACATCGTAGAAGGAGGCATC+AGG | - | chr3_1:73681618-73681637 | Msa0374270:five_prime_UTR | 50.0% |
AGGATAAGTCTCCTCCGCCA+TGG | + | chr3_1:73674427-73674446 | None:intergenic | 55.0% | |
GGCGGAGGAGACTTATCCTA+TGG | - | chr3_1:73674428-73674447 | Msa0374270:three_prime_UTR | 55.0% | |
GAAGCTTTGCCACCGAAGGA+AGG | + | chr3_1:73674501-73674520 | None:intergenic | 55.0% | |
TAGCGAAGCTTTGCCACCGA+AGG | + | chr3_1:73674505-73674524 | None:intergenic | 55.0% | |
TCGGTGGCAAAGCTTCGCTA+TGG | - | chr3_1:73674505-73674524 | Msa0374270:exon | 55.0% | |
CGGTGGCAAAGCTTCGCTAT+GGG | - | chr3_1:73674506-73674525 | Msa0374270:exon | 55.0% | |
GCAACATCGTCGAGGGATTG+AGG | + | chr3_1:73674546-73674565 | None:intergenic | 55.0% | |
GTGAGCTGCAACATCGTCGA+GGG | + | chr3_1:73674553-73674572 | None:intergenic | 55.0% | |
CTGCTGTTGTATGGTCCTCC+TGG | - | chr3_1:73674724-73674743 | Msa0374270:intron | 55.0% | |
AACATCGACGATTCTCGCGG+TGG | - | chr3_1:73674756-73674775 | Msa0374270:intron | 55.0% | |
CATTCCATCAGCCAATGCGG+AGG | - | chr3_1:73675523-73675542 | Msa0374270:intron | 55.0% | |
!! | AGAACCTCCGCATTGGCTGA+TGG | + | chr3_1:73675530-73675549 | None:intergenic | 55.0% |
AAGAGGGGCAAACCGAAACC+GGG | + | chr3_1:73676150-73676169 | None:intergenic | 55.0% | |
CAAGAGGGGCAAACCGAAAC+CGG | + | chr3_1:73676151-73676170 | None:intergenic | 55.0% | |
GCTACATTCTCACGATGGGC+GGG | - | chr3_1:73676319-73676338 | Msa0374270:CDS | 55.0% | |
CCGCAAATAGGGGTGGGAAT+AGG | - | chr3_1:73676381-73676400 | Msa0374270:intron | 55.0% | |
AATAGGGGTGGGAATAGGCC+AGG | - | chr3_1:73676386-73676405 | Msa0374270:intron | 55.0% | |
GGCTCGGCCTACTAAAAGCT+CGG | - | chr3_1:73676428-73676447 | Msa0374270:intron | 55.0% | |
GGCCTACTAAAAGCTCGGCT+CGG | - | chr3_1:73676433-73676452 | Msa0374270:intron | 55.0% | |
TACTAGTATACCGACCGGCC+TGG | + | chr3_1:73676558-73676577 | None:intergenic | 55.0% | |
! | TATATAGTGTGCGGGCTGCG+GGG | + | chr3_1:73677182-73677201 | None:intergenic | 55.0% |
! | CTATATAGTGTGCGGGCTGC+GGG | + | chr3_1:73677183-73677202 | None:intergenic | 55.0% |
AGGGGTAACCTTGGCTCAAC+TGG | - | chr3_1:73677369-73677388 | Msa0374270:intron | 55.0% | |
CATATGTAGGGTCCGGGAAG+GGG | + | chr3_1:73677499-73677518 | None:intergenic | 55.0% | |
GCATATGTAGGGTCCGGGAA+GGG | + | chr3_1:73677500-73677519 | None:intergenic | 55.0% | |
CTTCCCGGACCCTACATATG+CGG | - | chr3_1:73677499-73677518 | Msa0374270:CDS | 55.0% | |
TTCCCGGACCCTACATATGC+GGG | - | chr3_1:73677500-73677519 | Msa0374270:CDS | 55.0% | |
! | TGTGGCACAGGGTACCCTTT+CGG | + | chr3_1:73677700-73677719 | None:intergenic | 55.0% |
GCCTACCTCCCAATGCCAAA+AGG | - | chr3_1:73680293-73680312 | Msa0374270:intron | 55.0% | |
!! | GCCTTTTGGCATTGGGAGGT+AGG | + | chr3_1:73680297-73680316 | None:intergenic | 55.0% |
!! | TAGGGCCTTTTGGCATTGGG+AGG | + | chr3_1:73680301-73680320 | None:intergenic | 55.0% |
AGAATCTGAAAACGGGGGGG+GGG | + | chr3_1:73680740-73680759 | None:intergenic | 55.0% | |
GGGGTGAGGAGAAAGAACAG+GGG | + | chr3_1:73681163-73681182 | None:intergenic | 55.0% | |
GTGGGGTGAGGAGAAAGAAC+AGG | + | chr3_1:73681165-73681184 | None:intergenic | 55.0% | |
AAGAAGGACGACGCTGCAAC+GGG | + | chr3_1:73681202-73681221 | None:intergenic | 55.0% | |
GCACTCGGCCACTGAAAAGA+AGG | + | chr3_1:73681218-73681237 | None:intergenic | 55.0% | |
GTGGCCGAGTGCCTGAAATT+TGG | - | chr3_1:73681226-73681245 | Msa0374270:CDS | 55.0% | |
!! | CGTAGAAGGAGGCATCAGGA+TGG | - | chr3_1:73681622-73681641 | Msa0374270:five_prime_UTR | 55.0% |
GGCAAAACCGTCATTGCCGC+CGG | - | chr3_1:73674471-73674490 | Msa0374270:three_prime_UTR | 60.0% | |
AGGGTTACCGGCGGCAATGA+CGG | + | chr3_1:73674481-73674500 | None:intergenic | 60.0% | |
ACCGAAGGAAGGGTTACCGG+CGG | + | chr3_1:73674490-73674509 | None:intergenic | 60.0% | |
GCCACCGAAGGAAGGGTTAC+CGG | + | chr3_1:73674493-73674512 | None:intergenic | 60.0% | |
GGTGAGCTGCAACATCGTCG+AGG | + | chr3_1:73674554-73674573 | None:intergenic | 60.0% | |
! | GGCCGAGCCGAGCTTTTAGT+AGG | + | chr3_1:73676438-73676457 | None:intergenic | 60.0% |
GCCTATCAAGCCTACCAGGC+CGG | - | chr3_1:73676541-73676560 | Msa0374270:intron | 60.0% | |
ACCGGCCTGGTAGGCTTGAT+AGG | + | chr3_1:73676545-73676564 | None:intergenic | 60.0% | |
ATCAAGCCTACCAGGCCGGT+CGG | - | chr3_1:73676545-73676564 | Msa0374270:intron | 60.0% | |
AGTATACCGACCGGCCTGGT+AGG | + | chr3_1:73676554-73676573 | None:intergenic | 60.0% | |
AGTAGGGGTGGGAATGAGCC+GGG | + | chr3_1:73677107-73677126 | None:intergenic | 60.0% | |
GAGTAGGGGTGGGAATGAGC+CGG | + | chr3_1:73677108-73677127 | None:intergenic | 60.0% | |
AATGGGTGTGGTGCGGGTGT+GGG | - | chr3_1:73677137-73677156 | Msa0374270:intron | 60.0% | |
! | CAAATGGTGGGACCCCTTCC+CGG | - | chr3_1:73677484-73677503 | Msa0374270:CDS | 60.0% |
CGCATATGTAGGGTCCGGGA+AGG | + | chr3_1:73677501-73677520 | None:intergenic | 60.0% | |
CTCCCGCATATGTAGGGTCC+GGG | + | chr3_1:73677505-73677524 | None:intergenic | 60.0% | |
GCTCCCGCATATGTAGGGTC+CGG | + | chr3_1:73677506-73677525 | None:intergenic | 60.0% | |
ATGCGGGAGCTTCAGTGCAC+CGG | - | chr3_1:73677516-73677535 | Msa0374270:intron | 60.0% | |
! | CACAGGGTACCCTTTCGGCA+GGG | + | chr3_1:73677695-73677714 | None:intergenic | 60.0% |
AACTGCACTCGAACGGCTGG+CGG | + | chr3_1:73680053-73680072 | None:intergenic | 60.0% | |
ACCAACTGCACTCGAACGGC+TGG | + | chr3_1:73680056-73680075 | None:intergenic | 60.0% | |
AATCTGAAAACGGGGGGGGG+GGG | + | chr3_1:73680738-73680757 | None:intergenic | 60.0% | |
GAATCTGAAAACGGGGGGGG+GGG | + | chr3_1:73680739-73680758 | None:intergenic | 60.0% | |
GCCGCCGGTAACCCTTCCTT+CGG | - | chr3_1:73674486-73674505 | Msa0374270:three_prime_UTR | 65.0% | |
GCCGGTAACCCTTCCTTCGG+TGG | - | chr3_1:73674489-73674508 | Msa0374270:exon | 65.0% | |
AATAGGCCAGGCCGCTCGTC+AGG | - | chr3_1:73676398-73676417 | Msa0374270:intron | 65.0% | |
ATAGGCCAGGCCGCTCGTCA+GGG | - | chr3_1:73676399-73676418 | Msa0374270:intron | 65.0% | |
AGCCATAGGCCCCTGACGAG+CGG | + | chr3_1:73676412-73676431 | None:intergenic | 65.0% | |
CTCGTCAGGGGCCTATGGCT+CGG | - | chr3_1:73676412-73676431 | Msa0374270:intron | 65.0% | |
!! | AAGCAAAGCTCGGCTCGGCC+CGG | - | chr3_1:73677086-73677105 | Msa0374270:intron | 65.0% |
GAATGGGTGTGGTGCGGGTG+TGG | - | chr3_1:73677136-73677155 | Msa0374270:intron | 65.0% | |
CGGGAAGGGGTCCCACCATT+TGG | + | chr3_1:73677486-73677505 | None:intergenic | 65.0% | |
TGCGGGAGCTTCAGTGCACC+GGG | - | chr3_1:73677517-73677536 | Msa0374270:intron | 65.0% | |
! | GCACAGGGTACCCTTTCGGC+AGG | + | chr3_1:73677696-73677715 | None:intergenic | 65.0% |
GCCAGCCGTTCGAGTGCAGT+TGG | - | chr3_1:73680052-73680071 | Msa0374270:intron | 65.0% | |
ATCTGAAAACGGGGGGGGGG+GGG | + | chr3_1:73680737-73680756 | None:intergenic | 65.0% | |
TAGGCCAGGCCGCTCGTCAG+GGG | - | chr3_1:73676400-73676419 | Msa0374270:intron | 70.0% | |
! | ATAGTGTGCGGGCTGCGGGG+CGG | + | chr3_1:73677179-73677198 | None:intergenic | 70.0% |
TCTGAAAACGGGGGGGGGGG+GGG | + | chr3_1:73680736-73680755 | None:intergenic | 70.0% | |
TAGGCCCCTGACGAGCGGCC+TGG | + | chr3_1:73676407-73676426 | None:intergenic | 75.0% | |
GGCCGCTCGTCAGGGGCCTA+TGG | - | chr3_1:73676407-73676426 | Msa0374270:intron | 75.0% | |
TGAAAACGGGGGGGGGGGGG+GGG | + | chr3_1:73680734-73680753 | None:intergenic | 75.0% | |
CTGAAAACGGGGGGGGGGGG+GGG | + | chr3_1:73680735-73680754 | None:intergenic | 75.0% | |
!! | TGCGGGCTGCGGGGCGGACT+GGG | + | chr3_1:73677173-73677192 | None:intergenic | 80.0% |
! | AAAACGGGGGGGGGGGGGGG+GGG | + | chr3_1:73680732-73680751 | None:intergenic | 80.0% |
! | GAAAACGGGGGGGGGGGGGG+GGG | + | chr3_1:73680733-73680752 | None:intergenic | 80.0% |
!! | GTGCGGGCTGCGGGGCGGAC+TGG | + | chr3_1:73677174-73677193 | None:intergenic | 85.0% |
! | AAACGGGGGGGGGGGGGGGG+GGG | + | chr3_1:73680731-73680750 | None:intergenic | 85.0% |
! | GGGGGGGGGGGGGGCGGCAA+AGG | + | chr3_1:73680719-73680738 | None:intergenic | 90.0% |
! | AACGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:73680730-73680749 | None:intergenic | 90.0% |
! | ACGGGGGGGGGGGGGGGGGG+GGG | + | chr3_1:73680729-73680748 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3_1 | gene | 73674260 | 73681775 | 73674260 | ID=Msa0374270;Name=Msa0374270 |
chr3_1 | mRNA | 73674260 | 73681775 | 73674260 | ID=Msa0374270-mRNA-1;Parent=Msa0374270;Name=Msa0374270-mRNA-1;_AED=0.06;_eAED=0.06;_QI=166|1|1|1|1|1|9|248|355 |
chr3_1 | exon | 73674260 | 73674607 | 73674260 | ID=Msa0374270-mRNA-1:exon:16779;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73675939 | 73676007 | 73675939 | ID=Msa0374270-mRNA-1:exon:16778;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73676090 | 73676153 | 73676090 | ID=Msa0374270-mRNA-1:exon:16777;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73676236 | 73676365 | 73676236 | ID=Msa0374270-mRNA-1:exon:16776;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73677449 | 73677530 | 73677449 | ID=Msa0374270-mRNA-1:exon:16775;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73679816 | 73679975 | 73679816 | ID=Msa0374270-mRNA-1:exon:16774;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73680070 | 73680149 | 73680070 | ID=Msa0374270-mRNA-1:exon:16773;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73681130 | 73681346 | 73681130 | ID=Msa0374270-mRNA-1:exon:16772;Parent=Msa0374270-mRNA-1 |
chr3_1 | exon | 73681444 | 73681775 | 73681444 | ID=Msa0374270-mRNA-1:exon:16771;Parent=Msa0374270-mRNA-1 |
chr3_1 | five_prime_UTR | 73681610 | 73681775 | 73681610 | ID=Msa0374270-mRNA-1:five_prime_utr;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73681444 | 73681609 | 73681444 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73681130 | 73681346 | 73681130 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73680070 | 73680149 | 73680070 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73679816 | 73679975 | 73679816 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73677449 | 73677530 | 73677449 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73676236 | 73676365 | 73676236 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73676090 | 73676153 | 73676090 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73675939 | 73676007 | 73675939 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | CDS | 73674508 | 73674607 | 73674508 | ID=Msa0374270-mRNA-1:cds;Parent=Msa0374270-mRNA-1 |
chr3_1 | three_prime_UTR | 73674260 | 73674507 | 73674260 | ID=Msa0374270-mRNA-1:three_prime_utr;Parent=Msa0374270-mRNA-1 |
Gene Sequence |
Protein sequence |