Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935870 | sp|P29136|MEP1_SOYBN | 40.636 | 283 | 136 | 6 | 51 | 330 | 48 | 301 | 3.82e-63 | 206 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935870 | G7KJD9 | 91.291 | 333 | 28 | 1 | 1 | 333 | 1 | 332 | 0.0 | 622 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0478400 | Msa0935870 | 0.801196 | 1.009300e-48 | -8.615850e-47 |
| Msa0322460 | Msa0935870 | 0.810388 | 1.181778e-50 | -8.615850e-47 |
| Msa0870170 | Msa0935870 | 0.913462 | 5.985305e-84 | -8.615850e-47 |
| Msa0903420 | Msa0935870 | 0.897707 | 1.082994e-76 | -8.615850e-47 |
| Msa0935870 | Msa0972880 | 0.982786 | 5.370594e-156 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935870 | MtrunA17_Chr6g0451671 | 91.291 | 333 | 28 | 1 | 1 | 333 | 1 | 332 | 0.0 | 622 |
| Msa0935870 | MtrunA17_Chr5g0414891 | 36.455 | 299 | 153 | 6 | 43 | 330 | 53 | 325 | 4.94e-58 | 191 |
| Msa0935870 | MtrunA17_Chr8g0334661 | 38.255 | 298 | 147 | 7 | 42 | 330 | 37 | 306 | 2.30e-55 | 184 |
| Msa0935870 | MtrunA17_Chr8g0364281 | 34.375 | 352 | 171 | 9 | 6 | 330 | 44 | 362 | 5.93e-53 | 179 |
| Msa0935870 | MtrunA17_Chr5g0399301 | 36.207 | 290 | 147 | 9 | 48 | 330 | 54 | 312 | 4.73e-51 | 173 |
| Msa0935870 | MtrunA17_Chr5g0414641 | 31.164 | 292 | 153 | 10 | 47 | 330 | 67 | 318 | 6.75e-35 | 129 |
| Msa0935870 | MtrunA17_Chr5g0414771 | 29.545 | 264 | 140 | 9 | 54 | 309 | 3 | 228 | 1.50e-25 | 103 |
| Msa0935870 | MtrunA17_Chr5g0414657 | 27.586 | 290 | 175 | 9 | 49 | 334 | 55 | 313 | 1.92e-23 | 99.4 |
| Msa0935870 | MtrunA17_Chr5g0414654 | 26.217 | 267 | 137 | 6 | 49 | 309 | 37 | 249 | 5.41e-21 | 91.7 |
| Msa0935870 | MtrunA17_Chr5g0414661 | 26.316 | 285 | 161 | 11 | 59 | 330 | 36 | 284 | 4.20e-20 | 89.4 |
| Msa0935870 | MtrunA17_Chr5g0414791 | 27.703 | 296 | 150 | 13 | 31 | 309 | 57 | 305 | 1.99e-18 | 85.1 |
| Msa0935870 | MtrunA17_Chr5g0414821 | 25.776 | 322 | 163 | 13 | 40 | 330 | 96 | 372 | 1.54e-16 | 79.7 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0935870 | AT1G59970.1 | 37.162 | 296 | 156 | 6 | 40 | 330 | 43 | 313 | 4.18e-60 | 197 |
| Msa0935870 | AT4G16640.1 | 39.175 | 291 | 148 | 6 | 42 | 330 | 55 | 318 | 4.89e-56 | 186 |
| Msa0935870 | AT1G70170.1 | 34.311 | 341 | 176 | 8 | 13 | 330 | 8 | 323 | 3.40e-53 | 179 |
| Msa0935870 | AT1G24140.1 | 36.184 | 304 | 154 | 8 | 44 | 330 | 48 | 328 | 7.99e-53 | 179 |
| Msa0935870 | AT2G45040.1 | 35.976 | 328 | 148 | 10 | 13 | 330 | 20 | 295 | 2.56e-47 | 163 |
Find 81 sgRNAs with CRISPR-Local
Find 266 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTTGACTCAACAATGGAAAA+TGG | 0.249546 | 6_3:+6488971 | None:intergenic |
| TAGCATCATGTTGAACATTT+AGG | 0.265192 | 6_3:+6488828 | None:intergenic |
| TTTCTAAAAGGAGCAATAAA+AGG | 0.267257 | 6_3:+6488996 | None:intergenic |
| GGTCTTCATGCTGGATTGTT+GGG | 0.280757 | 6_3:-6487392 | Msa0935870:CDS |
| CAAAAGGGACAAACACTAAA+AGG | 0.294871 | 6_3:-6488890 | Msa0935870:CDS |
| AAGTGGAGCCTTCCATCTTC+TGG | 0.306584 | 6_3:+6488338 | None:intergenic |
| TACTGTGTCCAAGCCCTAAA+AGG | 0.314707 | 6_3:+6487285 | None:intergenic |
| TCTCCTTACACCTGCCCAAT+AGG | 0.318351 | 6_3:+6487238 | None:intergenic |
| TTGCCGTAGCCGTTGGTCTT+TGG | 0.323120 | 6_3:+6487351 | None:intergenic |
| AGGGATACATAGCTGCATTT+TGG | 0.323892 | 6_3:+6487258 | None:intergenic |
| ATGCAGCTATGTATCCCTAT+TGG | 0.324355 | 6_3:-6487253 | Msa0935870:CDS |
| TGACTATGTTTAGGCAAATC+AGG | 0.324771 | 6_3:+6488662 | None:intergenic |
| TACGGCAAAACAATTTGATT+TGG | 0.328072 | 6_3:-6487336 | Msa0935870:CDS |
| ATCTGTGGCTTTGCATGAAA+TGG | 0.342954 | 6_3:-6487312 | Msa0935870:CDS |
| TCTTCCAAGACTCACCAAAA+TGG | 0.357094 | 6_3:-6488601 | Msa0935870:CDS |
| CTTTGTTTGTGACTATGTTT+AGG | 0.357411 | 6_3:+6488653 | None:intergenic |
| ACTTTGATGGAGACGAAAAC+TGG | 0.368546 | 6_3:-6488319 | Msa0935870:CDS |
| CTTAAGACTTGTGGGATTGT+TGG | 0.378391 | 6_3:+6488295 | None:intergenic |
| CAAAATGGAGAGACTCAAAA+AGG | 0.380859 | 6_3:-6488586 | Msa0935870:CDS |
| ATTTCACATTCACGGAAGTT+GGG | 0.387217 | 6_3:-6488463 | Msa0935870:CDS |
| AGGTCTTCATGCTGGATTGT+TGG | 0.390597 | 6_3:-6487393 | Msa0935870:CDS |
| CTCCTTACACCTGCCCAATA+GGG | 0.395717 | 6_3:+6487239 | None:intergenic |
| GATGGAAGGCTCCACTTTGA+TGG | 0.398360 | 6_3:-6488332 | Msa0935870:CDS |
| AAGTTATCCTTAAGACTTGT+GGG | 0.410453 | 6_3:+6488287 | None:intergenic |
| AAGTGTTGATGTGTTGAGTA+TGG | 0.416250 | 6_3:-6488540 | Msa0935870:CDS |
| TACCATCACCTACATGTAAC+TGG | 0.419014 | 6_3:-6488737 | Msa0935870:CDS |
| CAACAATCCCACAAGTCTTA+AGG | 0.419763 | 6_3:-6488294 | Msa0935870:CDS |
| GATTTCACATTCACGGAAGT+TGG | 0.420328 | 6_3:-6488464 | Msa0935870:CDS |
| AAACCTCAAAGGTGTTCAAA+AGG | 0.423946 | 6_3:-6488906 | Msa0935870:CDS |
| TGCAGCTATGTATCCCTATT+GGG | 0.424514 | 6_3:-6487252 | Msa0935870:CDS |
| ACATTTCCTGGCCCATCAAA+AGG | 0.433183 | 6_3:+6488380 | None:intergenic |
| GTATGAGCTAGAACATTTCC+TGG | 0.435265 | 6_3:+6488368 | None:intergenic |
| ATTATTTCAGGTCTTCATGC+TGG | 0.444176 | 6_3:-6487401 | Msa0935870:intron |
| ATCCCTATTGGGCAGGTGTA+AGG | 0.446624 | 6_3:-6487241 | Msa0935870:CDS |
| TGATTCCATCCACATCATCT+TGG | 0.462472 | 6_3:+6487207 | None:intergenic |
| AGTTAGTGATTTCACATTCA+CGG | 0.469287 | 6_3:-6488471 | Msa0935870:CDS |
| ACAAGTCTTAAGGATAACTT+TGG | 0.471399 | 6_3:-6488284 | Msa0935870:intron |
| CATACTTTCCCTCCAGAAGA+TGG | 0.473529 | 6_3:-6488350 | Msa0935870:CDS |
| ACAATTTGATTTGGAATCTG+TGG | 0.478019 | 6_3:-6487327 | Msa0935870:CDS |
| GTGAAATCCGATCACTATAT+CGG | 0.481999 | 6_3:+6488427 | None:intergenic |
| CGTAGCCGTTGGTCTTTGGA+AGG | 0.484074 | 6_3:+6487355 | None:intergenic |
| AGTTTGGATGAATGAATCCT+TGG | 0.493372 | 6_3:+6488934 | None:intergenic |
| GTATGCTTGAAAATCTTTGA+GGG | 0.495671 | 6_3:+6488757 | None:intergenic |
| GGTATGCTTGAAAATCTTTG+AGG | 0.514066 | 6_3:+6488756 | None:intergenic |
| GTCTTCATGCTGGATTGTTG+GGG | 0.519679 | 6_3:-6487391 | Msa0935870:CDS |
| AACCTCAAAGGTGTTCAAAA+GGG | 0.530859 | 6_3:-6488905 | Msa0935870:CDS |
| GCTATGTATCCCTATTGGGC+AGG | 0.543151 | 6_3:-6487248 | Msa0935870:CDS |
| CAAACAAAGTGGTTTAGAGA+AGG | 0.546779 | 6_3:-6488639 | Msa0935870:CDS |
| AAAATGGTCGTTTAGAGTAG+TGG | 0.547135 | 6_3:+6488799 | None:intergenic |
| TCTGTGGCTTTGCATGAAAT+GGG | 0.554545 | 6_3:-6487311 | Msa0935870:CDS |
| CATTTCCTGGCCCATCAAAA+GGG | 0.556591 | 6_3:+6488381 | None:intergenic |
| AGATGATGTGGATGGAATCA+TGG | 0.557045 | 6_3:-6487204 | Msa0935870:CDS |
| GGACAAACACTAAAAGGCAT+TGG | 0.557998 | 6_3:-6488884 | Msa0935870:CDS |
| AAAGTTATCCTTAAGACTTG+TGG | 0.558696 | 6_3:+6488286 | None:intergenic |
| CAAACTCTTCAAAACCTCAA+AGG | 0.558738 | 6_3:-6488917 | Msa0935870:CDS |
| AAGAACCATAAAACCTTCCA+AGG | 0.561044 | 6_3:-6488951 | Msa0935870:CDS |
| CTAAACCAAGATGATGTGGA+TGG | 0.563005 | 6_3:-6487212 | Msa0935870:CDS |
| TGGATGAATGAATCCTTGGA+AGG | 0.563353 | 6_3:+6488938 | None:intergenic |
| GACTATGTTTAGGCAAATCA+GGG | 0.568078 | 6_3:+6488663 | None:intergenic |
| TTTCACATTCACGGAAGTTG+GGG | 0.569728 | 6_3:-6488462 | Msa0935870:CDS |
| TGGTCGTTTAGAGTAGTGGA+AGG | 0.570994 | 6_3:+6488803 | None:intergenic |
| ATCTTGAGTCTTCCACGTTG+TGG | 0.572692 | 6_3:-6488689 | Msa0935870:CDS |
| CTTCCAAAGACCAACGGCTA+CGG | 0.579541 | 6_3:-6487354 | Msa0935870:CDS |
| AAGGAGCAATAAAAGGAAAG+AGG | 0.580832 | 6_3:+6489003 | None:intergenic |
| AAATCTAAACCAAGATGATG+TGG | 0.581039 | 6_3:-6487216 | Msa0935870:CDS |
| TCATGCTGGATTGTTGGGGA+AGG | 0.584729 | 6_3:-6487387 | Msa0935870:CDS |
| TGGAGCCTTCCATCTTCTGG+AGG | 0.591987 | 6_3:+6488341 | None:intergenic |
| TATGGTTCTTGACTCAACAA+TGG | 0.593809 | 6_3:+6488964 | None:intergenic |
| GGATTTCACCATGGTGATCA+CGG | 0.597300 | 6_3:-6488413 | Msa0935870:CDS |
| AAACATAGTCACAAACAAAG+TGG | 0.601641 | 6_3:-6488650 | Msa0935870:CDS |
| GTAGCCGTTGGTCTTTGGAA+GGG | 0.606243 | 6_3:+6487356 | None:intergenic |
| CTTTCCCTCCAGAAGATGGA+AGG | 0.609700 | 6_3:-6488346 | Msa0935870:CDS |
| AACTCGACCGATATAGTGAT+CGG | 0.611162 | 6_3:-6488434 | Msa0935870:CDS |
| GATCACTATATCGGTCGAGT+TGG | 0.619534 | 6_3:+6488436 | None:intergenic |
| GGAGCCTTCCATCTTCTGGA+GGG | 0.638922 | 6_3:+6488342 | None:intergenic |
| GACCAGTTACATGTAGGTGA+TGG | 0.653297 | 6_3:+6488735 | None:intergenic |
| TATTCCCTTCCAAAGACCAA+CGG | 0.657183 | 6_3:-6487360 | Msa0935870:CDS |
| AAATATCACCGTGATCACCA+TGG | 0.688526 | 6_3:+6488405 | None:intergenic |
| CTACACGACCAGTTACATGT+AGG | 0.697312 | 6_3:+6488729 | None:intergenic |
| ATAGTGATCGGATTTCACCA+TGG | 0.731745 | 6_3:-6488422 | Msa0935870:CDS |
| AAATCAGGGACACCACAACG+TGG | 0.781696 | 6_3:+6488677 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTAAAATTATAA+AGG | + | chr6_3:6488208-6488227 | None:intergenic | 0.0% |
| !!! | ATATTTTATTAAAATTATAA+AGG | + | chr6_3:6488208-6488227 | None:intergenic | 0.0% |
| !! | TTAAATTTGTATTATCATTA+TGG | + | chr6_3:6488459-6488478 | None:intergenic | 10.0% |
| !!! | AAATTTAATGTACAATTTTT+AGG | - | chr6_3:6488471-6488490 | Msa0935870:CDS | 10.0% |
| !! | TTAAATTTGTATTATCATTA+TGG | + | chr6_3:6488459-6488478 | None:intergenic | 10.0% |
| !!! | AAATTTAATGTACAATTTTT+AGG | - | chr6_3:6488471-6488490 | Msa0935870:CDS | 10.0% |
| !! | AAAAATTACCTTAAAAGATT+TGG | - | chr6_3:6487361-6487380 | Msa0935870:CDS | 15.0% |
| !! | TCTTTATCATCTAATAAAAA+AGG | - | chr6_3:6488057-6488076 | Msa0935870:intron | 15.0% |
| !! | ATTATGTATCAAAGTTTAAA+CGG | - | chr6_3:6488393-6488412 | Msa0935870:CDS | 15.0% |
| !!! | AGTATTTTTAAAAAAAACTC+TGG | - | chr6_3:6488646-6488665 | Msa0935870:CDS | 15.0% |
| !! | AAAAATTACCTTAAAAGATT+TGG | - | chr6_3:6487361-6487380 | Msa0935870:CDS | 15.0% |
| !! | TCTTTATCATCTAATAAAAA+AGG | - | chr6_3:6488057-6488076 | Msa0935870:intron | 15.0% |
| !! | ATTATGTATCAAAGTTTAAA+CGG | - | chr6_3:6488393-6488412 | Msa0935870:CDS | 15.0% |
| !!! | AGTATTTTTAAAAAAAACTC+TGG | - | chr6_3:6488646-6488665 | Msa0935870:CDS | 15.0% |
| !!! | AATTTTTAGGTTATCATGTT+AGG | - | chr6_3:6488484-6488503 | Msa0935870:CDS | 20.0% |
| !!! | ATTTTTAGGTTATCATGTTA+GGG | - | chr6_3:6488485-6488504 | Msa0935870:CDS | 20.0% |
| !! | ATGAAGAAAAAAATTGTTAG+CGG | - | chr6_3:6488672-6488691 | Msa0935870:CDS | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_3:6488723-6488742 | None:intergenic | 20.0% |
| !! | ACTACAACAAAAATTATTTC+AGG | - | chr6_3:6488802-6488821 | Msa0935870:CDS | 20.0% |
| !!! | AATTTTTAGGTTATCATGTT+AGG | - | chr6_3:6488484-6488503 | Msa0935870:CDS | 20.0% |
| !!! | ATTTTTAGGTTATCATGTTA+GGG | - | chr6_3:6488485-6488504 | Msa0935870:CDS | 20.0% |
| !! | ATGAAGAAAAAAATTGTTAG+CGG | - | chr6_3:6488672-6488691 | Msa0935870:CDS | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_3:6488723-6488742 | None:intergenic | 20.0% |
| !! | ACTACAACAAAAATTATTTC+AGG | - | chr6_3:6488802-6488821 | Msa0935870:CDS | 20.0% |
| !! | TTTCTAAAAGGAGCAATAAA+AGG | + | chr6_3:6487222-6487241 | None:intergenic | 25.0% |
| !!! | TGGAAAATGGATTTTCTAAA+AGG | + | chr6_3:6487234-6487253 | None:intergenic | 25.0% |
| !! | ATTCCAAGTTTTCATCAAAA+TGG | + | chr6_3:6487435-6487454 | None:intergenic | 25.0% |
| ! | TACTAGCATGAGAAATATTA+AGG | - | chr6_3:6488308-6488327 | Msa0935870:CDS | 25.0% |
| ! | TTATAATATGAGATGAAAGG+AGG | - | chr6_3:6488417-6488436 | Msa0935870:CDS | 25.0% |
| !! | TTTCTAAAAGGAGCAATAAA+AGG | + | chr6_3:6487222-6487241 | None:intergenic | 25.0% |
| !!! | TGGAAAATGGATTTTCTAAA+AGG | + | chr6_3:6487234-6487253 | None:intergenic | 25.0% |
| !! | ATTCCAAGTTTTCATCAAAA+TGG | + | chr6_3:6487435-6487454 | None:intergenic | 25.0% |
| ! | TACTAGCATGAGAAATATTA+AGG | - | chr6_3:6488308-6488327 | Msa0935870:CDS | 25.0% |
| ! | TTATAATATGAGATGAAAGG+AGG | - | chr6_3:6488417-6488436 | Msa0935870:CDS | 25.0% |
| ! | TTAGGTAGCCAAATCTTTTA+AGG | + | chr6_3:6487372-6487391 | None:intergenic | 30.0% |
| TAGCATCATGTTGAACATTT+AGG | + | chr6_3:6487390-6487409 | None:intergenic | 30.0% | |
| GTATGCTTGAAAATCTTTGA+GGG | + | chr6_3:6487461-6487480 | None:intergenic | 30.0% | |
| ! | TGGAAGACTCAAGATTTTTA+AGG | + | chr6_3:6487521-6487540 | None:intergenic | 30.0% |
| ! | CTTTGTTTGTGACTATGTTT+AGG | + | chr6_3:6487565-6487584 | None:intergenic | 30.0% |
| AAACATAGTCACAAACAAAG+TGG | - | chr6_3:6487565-6487584 | Msa0935870:intron | 30.0% | |
| AGTTAGTGATTTCACATTCA+CGG | - | chr6_3:6487744-6487763 | Msa0935870:intron | 30.0% | |
| ! | GTGATATTTACCCTTTTGAT+GGG | - | chr6_3:6487824-6487843 | Msa0935870:intron | 30.0% |
| AAGTTATCCTTAAGACTTGT+GGG | + | chr6_3:6487931-6487950 | None:intergenic | 30.0% | |
| AAAGTTATCCTTAAGACTTG+TGG | + | chr6_3:6487932-6487951 | None:intergenic | 30.0% | |
| ACAAGTCTTAAGGATAACTT+TGG | - | chr6_3:6487931-6487950 | Msa0935870:intron | 30.0% | |
| TCTCTGCTTCATATTATAAG+TGG | - | chr6_3:6488151-6488170 | Msa0935870:intron | 30.0% | |
| GGCTTATAATATGAGATGAA+AGG | - | chr6_3:6488414-6488433 | Msa0935870:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr6_3:6488571-6488590 | Msa0935870:CDS | 30.0% | |
| !!! | TTACCACCAGTAGATTTTTT+TGG | + | chr6_3:6488622-6488641 | None:intergenic | 30.0% |
| TACGGCAAAACAATTTGATT+TGG | - | chr6_3:6488879-6488898 | Msa0935870:CDS | 30.0% | |
| !! | ACAATTTGATTTGGAATCTG+TGG | - | chr6_3:6488888-6488907 | Msa0935870:CDS | 30.0% |
| AAATCTAAACCAAGATGATG+TGG | - | chr6_3:6488999-6489018 | Msa0935870:CDS | 30.0% | |
| ! | TTAGGTAGCCAAATCTTTTA+AGG | + | chr6_3:6487372-6487391 | None:intergenic | 30.0% |
| TAGCATCATGTTGAACATTT+AGG | + | chr6_3:6487390-6487409 | None:intergenic | 30.0% | |
| GTATGCTTGAAAATCTTTGA+GGG | + | chr6_3:6487461-6487480 | None:intergenic | 30.0% | |
| ! | TGGAAGACTCAAGATTTTTA+AGG | + | chr6_3:6487521-6487540 | None:intergenic | 30.0% |
| ! | CTTTGTTTGTGACTATGTTT+AGG | + | chr6_3:6487565-6487584 | None:intergenic | 30.0% |
| AAACATAGTCACAAACAAAG+TGG | - | chr6_3:6487565-6487584 | Msa0935870:intron | 30.0% | |
| AGTTAGTGATTTCACATTCA+CGG | - | chr6_3:6487744-6487763 | Msa0935870:intron | 30.0% | |
| ! | GTGATATTTACCCTTTTGAT+GGG | - | chr6_3:6487824-6487843 | Msa0935870:intron | 30.0% |
| AAGTTATCCTTAAGACTTGT+GGG | + | chr6_3:6487931-6487950 | None:intergenic | 30.0% | |
| AAAGTTATCCTTAAGACTTG+TGG | + | chr6_3:6487932-6487951 | None:intergenic | 30.0% | |
| ACAAGTCTTAAGGATAACTT+TGG | - | chr6_3:6487931-6487950 | Msa0935870:intron | 30.0% | |
| TCTCTGCTTCATATTATAAG+TGG | - | chr6_3:6488151-6488170 | Msa0935870:intron | 30.0% | |
| GGCTTATAATATGAGATGAA+AGG | - | chr6_3:6488414-6488433 | Msa0935870:CDS | 30.0% | |
| GACAATGCATAAAATATGCA+AGG | - | chr6_3:6488571-6488590 | Msa0935870:CDS | 30.0% | |
| !!! | TTACCACCAGTAGATTTTTT+TGG | + | chr6_3:6488622-6488641 | None:intergenic | 30.0% |
| TACGGCAAAACAATTTGATT+TGG | - | chr6_3:6488879-6488898 | Msa0935870:CDS | 30.0% | |
| !! | ACAATTTGATTTGGAATCTG+TGG | - | chr6_3:6488888-6488907 | Msa0935870:CDS | 30.0% |
| AAATCTAAACCAAGATGATG+TGG | - | chr6_3:6488999-6489018 | Msa0935870:CDS | 30.0% | |
| AAGGAGCAATAAAAGGAAAG+AGG | + | chr6_3:6487215-6487234 | None:intergenic | 35.0% | |
| CTTGACTCAACAATGGAAAA+TGG | + | chr6_3:6487247-6487266 | None:intergenic | 35.0% | |
| TATGGTTCTTGACTCAACAA+TGG | + | chr6_3:6487254-6487273 | None:intergenic | 35.0% | |
| AAGAACCATAAAACCTTCCA+AGG | - | chr6_3:6487264-6487283 | Msa0935870:CDS | 35.0% | |
| ! | TGAATCCTTGGAAGGTTTTA+TGG | + | chr6_3:6487272-6487291 | None:intergenic | 35.0% |
| AGTTTGGATGAATGAATCCT+TGG | + | chr6_3:6487284-6487303 | None:intergenic | 35.0% | |
| !!! | CTTTGAGGTTTTGAAGAGTT+TGG | + | chr6_3:6487300-6487319 | None:intergenic | 35.0% |
| CAAACTCTTCAAAACCTCAA+AGG | - | chr6_3:6487298-6487317 | Msa0935870:CDS | 35.0% | |
| !! | AAACCTCAAAGGTGTTCAAA+AGG | - | chr6_3:6487309-6487328 | Msa0935870:CDS | 35.0% |
| !! | AACCTCAAAGGTGTTCAAAA+GGG | - | chr6_3:6487310-6487329 | Msa0935870:CDS | 35.0% |
| CAAAAGGGACAAACACTAAA+AGG | - | chr6_3:6487325-6487344 | Msa0935870:CDS | 35.0% | |
| ! | AAAATGGTCGTTTAGAGTAG+TGG | + | chr6_3:6487419-6487438 | None:intergenic | 35.0% |
| !! | CGACCATTTTGATGAAAACT+TGG | - | chr6_3:6487429-6487448 | Msa0935870:intron | 35.0% |
| GGTATGCTTGAAAATCTTTG+AGG | + | chr6_3:6487462-6487481 | None:intergenic | 35.0% | |
| GACTATGTTTAGGCAAATCA+GGG | + | chr6_3:6487555-6487574 | None:intergenic | 35.0% | |
| TGACTATGTTTAGGCAAATC+AGG | + | chr6_3:6487556-6487575 | None:intergenic | 35.0% | |
| CAAACAAAGTGGTTTAGAGA+AGG | - | chr6_3:6487576-6487595 | Msa0935870:intron | 35.0% | |
| !!! | CTTTTTGAGTCTCTCCATTT+TGG | + | chr6_3:6487631-6487650 | None:intergenic | 35.0% |
| CAAAATGGAGAGACTCAAAA+AGG | - | chr6_3:6487629-6487648 | Msa0935870:intron | 35.0% | |
| !! | AAGTGTTGATGTGTTGAGTA+TGG | - | chr6_3:6487675-6487694 | Msa0935870:intron | 35.0% |
| ATTTCACATTCACGGAAGTT+GGG | - | chr6_3:6487752-6487771 | Msa0935870:intron | 35.0% | |
| GTGAAATCCGATCACTATAT+CGG | + | chr6_3:6487791-6487810 | None:intergenic | 35.0% | |
| ! | GGTGATATTTACCCTTTTGA+TGG | - | chr6_3:6487823-6487842 | Msa0935870:intron | 35.0% |
| TAGATTGATACAAGCGTTAG+AGG | + | chr6_3:6488517-6488536 | None:intergenic | 35.0% | |
| TAACGCTTGTATCAATCTAC+TGG | - | chr6_3:6488518-6488537 | Msa0935870:CDS | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr6_3:6488576-6488595 | Msa0935870:CDS | 35.0% | |
| ! | ATTATTTCAGGTCTTCATGC+TGG | - | chr6_3:6488814-6488833 | Msa0935870:CDS | 35.0% |
| ! | ATGAAATGGGTCACCTTTTA+GGG | - | chr6_3:6488917-6488936 | Msa0935870:CDS | 35.0% |
| AAGGAGCAATAAAAGGAAAG+AGG | + | chr6_3:6487215-6487234 | None:intergenic | 35.0% | |
| CTTGACTCAACAATGGAAAA+TGG | + | chr6_3:6487247-6487266 | None:intergenic | 35.0% | |
| TATGGTTCTTGACTCAACAA+TGG | + | chr6_3:6487254-6487273 | None:intergenic | 35.0% | |
| AAGAACCATAAAACCTTCCA+AGG | - | chr6_3:6487264-6487283 | Msa0935870:CDS | 35.0% | |
| ! | TGAATCCTTGGAAGGTTTTA+TGG | + | chr6_3:6487272-6487291 | None:intergenic | 35.0% |
| AGTTTGGATGAATGAATCCT+TGG | + | chr6_3:6487284-6487303 | None:intergenic | 35.0% | |
| !!! | CTTTGAGGTTTTGAAGAGTT+TGG | + | chr6_3:6487300-6487319 | None:intergenic | 35.0% |
| CAAACTCTTCAAAACCTCAA+AGG | - | chr6_3:6487298-6487317 | Msa0935870:CDS | 35.0% | |
| !! | AAACCTCAAAGGTGTTCAAA+AGG | - | chr6_3:6487309-6487328 | Msa0935870:CDS | 35.0% |
| !! | AACCTCAAAGGTGTTCAAAA+GGG | - | chr6_3:6487310-6487329 | Msa0935870:CDS | 35.0% |
| CAAAAGGGACAAACACTAAA+AGG | - | chr6_3:6487325-6487344 | Msa0935870:CDS | 35.0% | |
| ! | AAAATGGTCGTTTAGAGTAG+TGG | + | chr6_3:6487419-6487438 | None:intergenic | 35.0% |
| !! | CGACCATTTTGATGAAAACT+TGG | - | chr6_3:6487429-6487448 | Msa0935870:intron | 35.0% |
| GGTATGCTTGAAAATCTTTG+AGG | + | chr6_3:6487462-6487481 | None:intergenic | 35.0% | |
| GACTATGTTTAGGCAAATCA+GGG | + | chr6_3:6487555-6487574 | None:intergenic | 35.0% | |
| TGACTATGTTTAGGCAAATC+AGG | + | chr6_3:6487556-6487575 | None:intergenic | 35.0% | |
| CAAACAAAGTGGTTTAGAGA+AGG | - | chr6_3:6487576-6487595 | Msa0935870:intron | 35.0% | |
| !!! | CTTTTTGAGTCTCTCCATTT+TGG | + | chr6_3:6487631-6487650 | None:intergenic | 35.0% |
| CAAAATGGAGAGACTCAAAA+AGG | - | chr6_3:6487629-6487648 | Msa0935870:intron | 35.0% | |
| !! | AAGTGTTGATGTGTTGAGTA+TGG | - | chr6_3:6487675-6487694 | Msa0935870:intron | 35.0% |
| ATTTCACATTCACGGAAGTT+GGG | - | chr6_3:6487752-6487771 | Msa0935870:intron | 35.0% | |
| GTGAAATCCGATCACTATAT+CGG | + | chr6_3:6487791-6487810 | None:intergenic | 35.0% | |
| ! | GGTGATATTTACCCTTTTGA+TGG | - | chr6_3:6487823-6487842 | Msa0935870:intron | 35.0% |
| TAGATTGATACAAGCGTTAG+AGG | + | chr6_3:6488517-6488536 | None:intergenic | 35.0% | |
| TAACGCTTGTATCAATCTAC+TGG | - | chr6_3:6488518-6488537 | Msa0935870:CDS | 35.0% | |
| TGCATAAAATATGCAAGGTC+CGG | - | chr6_3:6488576-6488595 | Msa0935870:CDS | 35.0% | |
| ! | ATTATTTCAGGTCTTCATGC+TGG | - | chr6_3:6488814-6488833 | Msa0935870:CDS | 35.0% |
| ! | ATGAAATGGGTCACCTTTTA+GGG | - | chr6_3:6488917-6488936 | Msa0935870:CDS | 35.0% |
| TGGATGAATGAATCCTTGGA+AGG | + | chr6_3:6487280-6487299 | None:intergenic | 40.0% | |
| ! | GGACAAACACTAAAAGGCAT+TGG | - | chr6_3:6487331-6487350 | Msa0935870:CDS | 40.0% |
| TACCATCACCTACATGTAAC+TGG | - | chr6_3:6487478-6487497 | Msa0935870:intron | 40.0% | |
| ! | TTTTGGTGAGTCTTGGAAGA+AGG | + | chr6_3:6487614-6487633 | None:intergenic | 40.0% |
| TCTTCCAAGACTCACCAAAA+TGG | - | chr6_3:6487614-6487633 | Msa0935870:intron | 40.0% | |
| !!! | GTGAGAACGCGTTTTTAAGT+TGG | - | chr6_3:6487716-6487735 | Msa0935870:intron | 40.0% |
| GATTTCACATTCACGGAAGT+TGG | - | chr6_3:6487751-6487770 | Msa0935870:intron | 40.0% | |
| TTTCACATTCACGGAAGTTG+GGG | - | chr6_3:6487753-6487772 | Msa0935870:intron | 40.0% | |
| AACTCGACCGATATAGTGAT+CGG | - | chr6_3:6487781-6487800 | Msa0935870:intron | 40.0% | |
| ATAGTGATCGGATTTCACCA+TGG | - | chr6_3:6487793-6487812 | Msa0935870:intron | 40.0% | |
| AAATATCACCGTGATCACCA+TGG | + | chr6_3:6487813-6487832 | None:intergenic | 40.0% | |
| GTATGAGCTAGAACATTTCC+TGG | + | chr6_3:6487850-6487869 | None:intergenic | 40.0% | |
| ! | AGTTTTCGTCTCCATCAAAG+TGG | + | chr6_3:6487897-6487916 | None:intergenic | 40.0% |
| ACTTTGATGGAGACGAAAAC+TGG | - | chr6_3:6487896-6487915 | Msa0935870:intron | 40.0% | |
| CTTAAGACTTGTGGGATTGT+TGG | + | chr6_3:6487923-6487942 | None:intergenic | 40.0% | |
| CAACAATCCCACAAGTCTTA+AGG | - | chr6_3:6487921-6487940 | Msa0935870:intron | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+TGG | - | chr6_3:6488549-6488568 | Msa0935870:CDS | 40.0% |
| GCATAAAATATGCAAGGTCC+GGG | - | chr6_3:6488577-6488596 | Msa0935870:CDS | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr6_3:6488578-6488597 | Msa0935870:CDS | 40.0% | |
| !!! | CCAGTAGATTTTTTTGGTGG+TGG | + | chr6_3:6488616-6488635 | None:intergenic | 40.0% |
| CCACCACCAAAAAAATCTAC+TGG | - | chr6_3:6488613-6488632 | Msa0935870:CDS | 40.0% | |
| !!! | CCACCAGTAGATTTTTTTGG+TGG | + | chr6_3:6488619-6488638 | None:intergenic | 40.0% |
| CCACCAAAAAAATCTACTGG+TGG | - | chr6_3:6488616-6488635 | Msa0935870:CDS | 40.0% | |
| TATTCCCTTCCAAAGACCAA+CGG | - | chr6_3:6488855-6488874 | Msa0935870:CDS | 40.0% | |
| ! | ATCTGTGGCTTTGCATGAAA+TGG | - | chr6_3:6488903-6488922 | Msa0935870:CDS | 40.0% |
| ! | TCTGTGGCTTTGCATGAAAT+GGG | - | chr6_3:6488904-6488923 | Msa0935870:CDS | 40.0% |
| ! | CATGAAATGGGTCACCTTTT+AGG | - | chr6_3:6488916-6488935 | Msa0935870:CDS | 40.0% |
| ! | AGGGATACATAGCTGCATTT+TGG | + | chr6_3:6488960-6488979 | None:intergenic | 40.0% |
| ATGCAGCTATGTATCCCTAT+TGG | - | chr6_3:6488962-6488981 | Msa0935870:CDS | 40.0% | |
| TGCAGCTATGTATCCCTATT+GGG | - | chr6_3:6488963-6488982 | Msa0935870:CDS | 40.0% | |
| CTAAACCAAGATGATGTGGA+TGG | - | chr6_3:6489003-6489022 | Msa0935870:CDS | 40.0% | |
| TGATTCCATCCACATCATCT+TGG | + | chr6_3:6489011-6489030 | None:intergenic | 40.0% | |
| AGATGATGTGGATGGAATCA+TGG | - | chr6_3:6489011-6489030 | Msa0935870:CDS | 40.0% | |
| TGGATGAATGAATCCTTGGA+AGG | + | chr6_3:6487280-6487299 | None:intergenic | 40.0% | |
| ! | GGACAAACACTAAAAGGCAT+TGG | - | chr6_3:6487331-6487350 | Msa0935870:CDS | 40.0% |
| TACCATCACCTACATGTAAC+TGG | - | chr6_3:6487478-6487497 | Msa0935870:intron | 40.0% | |
| ! | TTTTGGTGAGTCTTGGAAGA+AGG | + | chr6_3:6487614-6487633 | None:intergenic | 40.0% |
| TCTTCCAAGACTCACCAAAA+TGG | - | chr6_3:6487614-6487633 | Msa0935870:intron | 40.0% | |
| !!! | GTGAGAACGCGTTTTTAAGT+TGG | - | chr6_3:6487716-6487735 | Msa0935870:intron | 40.0% |
| GATTTCACATTCACGGAAGT+TGG | - | chr6_3:6487751-6487770 | Msa0935870:intron | 40.0% | |
| TTTCACATTCACGGAAGTTG+GGG | - | chr6_3:6487753-6487772 | Msa0935870:intron | 40.0% | |
| AACTCGACCGATATAGTGAT+CGG | - | chr6_3:6487781-6487800 | Msa0935870:intron | 40.0% | |
| ATAGTGATCGGATTTCACCA+TGG | - | chr6_3:6487793-6487812 | Msa0935870:intron | 40.0% | |
| AAATATCACCGTGATCACCA+TGG | + | chr6_3:6487813-6487832 | None:intergenic | 40.0% | |
| GTATGAGCTAGAACATTTCC+TGG | + | chr6_3:6487850-6487869 | None:intergenic | 40.0% | |
| ! | AGTTTTCGTCTCCATCAAAG+TGG | + | chr6_3:6487897-6487916 | None:intergenic | 40.0% |
| ACTTTGATGGAGACGAAAAC+TGG | - | chr6_3:6487896-6487915 | Msa0935870:intron | 40.0% | |
| CTTAAGACTTGTGGGATTGT+TGG | + | chr6_3:6487923-6487942 | None:intergenic | 40.0% | |
| CAACAATCCCACAAGTCTTA+AGG | - | chr6_3:6487921-6487940 | Msa0935870:intron | 40.0% | |
| ! | TGAGCTTAACTCAGTTGGTA+TGG | - | chr6_3:6488549-6488568 | Msa0935870:CDS | 40.0% |
| GCATAAAATATGCAAGGTCC+GGG | - | chr6_3:6488577-6488596 | Msa0935870:CDS | 40.0% | |
| CATAAAATATGCAAGGTCCG+GGG | - | chr6_3:6488578-6488597 | Msa0935870:CDS | 40.0% | |
| !!! | CCAGTAGATTTTTTTGGTGG+TGG | + | chr6_3:6488616-6488635 | None:intergenic | 40.0% |
| CCACCACCAAAAAAATCTAC+TGG | - | chr6_3:6488613-6488632 | Msa0935870:CDS | 40.0% | |
| !!! | CCACCAGTAGATTTTTTTGG+TGG | + | chr6_3:6488619-6488638 | None:intergenic | 40.0% |
| CCACCAAAAAAATCTACTGG+TGG | - | chr6_3:6488616-6488635 | Msa0935870:CDS | 40.0% | |
| TATTCCCTTCCAAAGACCAA+CGG | - | chr6_3:6488855-6488874 | Msa0935870:CDS | 40.0% | |
| ! | ATCTGTGGCTTTGCATGAAA+TGG | - | chr6_3:6488903-6488922 | Msa0935870:CDS | 40.0% |
| ! | TCTGTGGCTTTGCATGAAAT+GGG | - | chr6_3:6488904-6488923 | Msa0935870:CDS | 40.0% |
| ! | CATGAAATGGGTCACCTTTT+AGG | - | chr6_3:6488916-6488935 | Msa0935870:CDS | 40.0% |
| ! | AGGGATACATAGCTGCATTT+TGG | + | chr6_3:6488960-6488979 | None:intergenic | 40.0% |
| ATGCAGCTATGTATCCCTAT+TGG | - | chr6_3:6488962-6488981 | Msa0935870:CDS | 40.0% | |
| TGCAGCTATGTATCCCTATT+GGG | - | chr6_3:6488963-6488982 | Msa0935870:CDS | 40.0% | |
| CTAAACCAAGATGATGTGGA+TGG | - | chr6_3:6489003-6489022 | Msa0935870:CDS | 40.0% | |
| TGATTCCATCCACATCATCT+TGG | + | chr6_3:6489011-6489030 | None:intergenic | 40.0% | |
| AGATGATGTGGATGGAATCA+TGG | - | chr6_3:6489011-6489030 | Msa0935870:CDS | 40.0% | |
| ! | GTCCCTTTTGAACACCTTTG+AGG | + | chr6_3:6487315-6487334 | None:intergenic | 45.0% |
| ! | TGGTCGTTTAGAGTAGTGGA+AGG | + | chr6_3:6487415-6487434 | None:intergenic | 45.0% |
| GACCAGTTACATGTAGGTGA+TGG | + | chr6_3:6487483-6487502 | None:intergenic | 45.0% | |
| CTACACGACCAGTTACATGT+AGG | + | chr6_3:6487489-6487508 | None:intergenic | 45.0% | |
| ATCTTGAGTCTTCCACGTTG+TGG | - | chr6_3:6487526-6487545 | Msa0935870:intron | 45.0% | |
| !! | CTCTCCATTTTGGTGAGTCT+TGG | + | chr6_3:6487621-6487640 | None:intergenic | 45.0% |
| GATCACTATATCGGTCGAGT+TGG | + | chr6_3:6487782-6487801 | None:intergenic | 45.0% | |
| GGATTTCACCATGGTGATCA+CGG | - | chr6_3:6487802-6487821 | Msa0935870:intron | 45.0% | |
| !! | ATTTACCCTTTTGATGGGCC+AGG | - | chr6_3:6487829-6487848 | Msa0935870:intron | 45.0% |
| CATTTCCTGGCCCATCAAAA+GGG | + | chr6_3:6487837-6487856 | None:intergenic | 45.0% | |
| ACATTTCCTGGCCCATCAAA+AGG | + | chr6_3:6487838-6487857 | None:intergenic | 45.0% | |
| CATACTTTCCCTCCAGAAGA+TGG | - | chr6_3:6487865-6487884 | Msa0935870:intron | 45.0% | |
| CATCGTGAGCTTAACTCAGT+TGG | - | chr6_3:6488544-6488563 | Msa0935870:CDS | 45.0% | |
| AGGTCTTCATGCTGGATTGT+TGG | - | chr6_3:6488822-6488841 | Msa0935870:CDS | 45.0% | |
| GGTCTTCATGCTGGATTGTT+GGG | - | chr6_3:6488823-6488842 | Msa0935870:CDS | 45.0% | |
| GTCTTCATGCTGGATTGTTG+GGG | - | chr6_3:6488824-6488843 | Msa0935870:CDS | 45.0% | |
| !! | AATTGTTTTGCCGTAGCCGT+TGG | + | chr6_3:6488874-6488893 | None:intergenic | 45.0% |
| TACTGTGTCCAAGCCCTAAA+AGG | + | chr6_3:6488933-6488952 | None:intergenic | 45.0% | |
| ! | GTCCCTTTTGAACACCTTTG+AGG | + | chr6_3:6487315-6487334 | None:intergenic | 45.0% |
| ! | TGGTCGTTTAGAGTAGTGGA+AGG | + | chr6_3:6487415-6487434 | None:intergenic | 45.0% |
| GACCAGTTACATGTAGGTGA+TGG | + | chr6_3:6487483-6487502 | None:intergenic | 45.0% | |
| CTACACGACCAGTTACATGT+AGG | + | chr6_3:6487489-6487508 | None:intergenic | 45.0% | |
| ATCTTGAGTCTTCCACGTTG+TGG | - | chr6_3:6487526-6487545 | Msa0935870:intron | 45.0% | |
| !! | CTCTCCATTTTGGTGAGTCT+TGG | + | chr6_3:6487621-6487640 | None:intergenic | 45.0% |
| GATCACTATATCGGTCGAGT+TGG | + | chr6_3:6487782-6487801 | None:intergenic | 45.0% | |
| GGATTTCACCATGGTGATCA+CGG | - | chr6_3:6487802-6487821 | Msa0935870:intron | 45.0% | |
| !! | ATTTACCCTTTTGATGGGCC+AGG | - | chr6_3:6487829-6487848 | Msa0935870:intron | 45.0% |
| CATTTCCTGGCCCATCAAAA+GGG | + | chr6_3:6487837-6487856 | None:intergenic | 45.0% | |
| ACATTTCCTGGCCCATCAAA+AGG | + | chr6_3:6487838-6487857 | None:intergenic | 45.0% | |
| CATACTTTCCCTCCAGAAGA+TGG | - | chr6_3:6487865-6487884 | Msa0935870:intron | 45.0% | |
| CATCGTGAGCTTAACTCAGT+TGG | - | chr6_3:6488544-6488563 | Msa0935870:CDS | 45.0% | |
| AGGTCTTCATGCTGGATTGT+TGG | - | chr6_3:6488822-6488841 | Msa0935870:CDS | 45.0% | |
| GGTCTTCATGCTGGATTGTT+GGG | - | chr6_3:6488823-6488842 | Msa0935870:CDS | 45.0% | |
| GTCTTCATGCTGGATTGTTG+GGG | - | chr6_3:6488824-6488843 | Msa0935870:CDS | 45.0% | |
| !! | AATTGTTTTGCCGTAGCCGT+TGG | + | chr6_3:6488874-6488893 | None:intergenic | 45.0% |
| TACTGTGTCCAAGCCCTAAA+AGG | + | chr6_3:6488933-6488952 | None:intergenic | 45.0% | |
| AAATCAGGGACACCACAACG+TGG | + | chr6_3:6487541-6487560 | None:intergenic | 50.0% | |
| CTTTCCCTCCAGAAGATGGA+AGG | - | chr6_3:6487869-6487888 | Msa0935870:intron | 50.0% | |
| AAGTGGAGCCTTCCATCTTC+TGG | + | chr6_3:6487880-6487899 | None:intergenic | 50.0% | |
| GATGGAAGGCTCCACTTTGA+TGG | - | chr6_3:6487883-6487902 | Msa0935870:intron | 50.0% | |
| !!! | GATTTTTTTGGTGGTGGCCG+AGG | + | chr6_3:6488610-6488629 | None:intergenic | 50.0% |
| TCATGCTGGATTGTTGGGGA+AGG | - | chr6_3:6488828-6488847 | Msa0935870:CDS | 50.0% | |
| !! | GTAGCCGTTGGTCTTTGGAA+GGG | + | chr6_3:6488862-6488881 | None:intergenic | 50.0% |
| CTTCCAAAGACCAACGGCTA+CGG | - | chr6_3:6488861-6488880 | Msa0935870:CDS | 50.0% | |
| !!! | ATGGGTCACCTTTTAGGGCT+TGG | - | chr6_3:6488922-6488941 | Msa0935870:CDS | 50.0% |
| GCTATGTATCCCTATTGGGC+AGG | - | chr6_3:6488967-6488986 | Msa0935870:CDS | 50.0% | |
| ATCCCTATTGGGCAGGTGTA+AGG | - | chr6_3:6488974-6488993 | Msa0935870:CDS | 50.0% | |
| CTCCTTACACCTGCCCAATA+GGG | + | chr6_3:6488979-6488998 | None:intergenic | 50.0% | |
| TCTCCTTACACCTGCCCAAT+AGG | + | chr6_3:6488980-6488999 | None:intergenic | 50.0% | |
| AAATCAGGGACACCACAACG+TGG | + | chr6_3:6487541-6487560 | None:intergenic | 50.0% | |
| CTTTCCCTCCAGAAGATGGA+AGG | - | chr6_3:6487869-6487888 | Msa0935870:intron | 50.0% | |
| AAGTGGAGCCTTCCATCTTC+TGG | + | chr6_3:6487880-6487899 | None:intergenic | 50.0% | |
| GATGGAAGGCTCCACTTTGA+TGG | - | chr6_3:6487883-6487902 | Msa0935870:intron | 50.0% | |
| !!! | GATTTTTTTGGTGGTGGCCG+AGG | + | chr6_3:6488610-6488629 | None:intergenic | 50.0% |
| TCATGCTGGATTGTTGGGGA+AGG | - | chr6_3:6488828-6488847 | Msa0935870:CDS | 50.0% | |
| !! | GTAGCCGTTGGTCTTTGGAA+GGG | + | chr6_3:6488862-6488881 | None:intergenic | 50.0% |
| CTTCCAAAGACCAACGGCTA+CGG | - | chr6_3:6488861-6488880 | Msa0935870:CDS | 50.0% | |
| !!! | ATGGGTCACCTTTTAGGGCT+TGG | - | chr6_3:6488922-6488941 | Msa0935870:CDS | 50.0% |
| GCTATGTATCCCTATTGGGC+AGG | - | chr6_3:6488967-6488986 | Msa0935870:CDS | 50.0% | |
| ATCCCTATTGGGCAGGTGTA+AGG | - | chr6_3:6488974-6488993 | Msa0935870:CDS | 50.0% | |
| CTCCTTACACCTGCCCAATA+GGG | + | chr6_3:6488979-6488998 | None:intergenic | 50.0% | |
| TCTCCTTACACCTGCCCAAT+AGG | + | chr6_3:6488980-6488999 | None:intergenic | 50.0% | |
| GGAGCCTTCCATCTTCTGGA+GGG | + | chr6_3:6487876-6487895 | None:intergenic | 55.0% | |
| TGGAGCCTTCCATCTTCTGG+AGG | + | chr6_3:6487877-6487896 | None:intergenic | 55.0% | |
| !! | CGTAGCCGTTGGTCTTTGGA+AGG | + | chr6_3:6488863-6488882 | None:intergenic | 55.0% |
| !! | TTGCCGTAGCCGTTGGTCTT+TGG | + | chr6_3:6488867-6488886 | None:intergenic | 55.0% |
| GGAGCCTTCCATCTTCTGGA+GGG | + | chr6_3:6487876-6487895 | None:intergenic | 55.0% | |
| TGGAGCCTTCCATCTTCTGG+AGG | + | chr6_3:6487877-6487896 | None:intergenic | 55.0% | |
| !! | CGTAGCCGTTGGTCTTTGGA+AGG | + | chr6_3:6488863-6488882 | None:intergenic | 55.0% |
| !! | TTGCCGTAGCCGTTGGTCTT+TGG | + | chr6_3:6488867-6488886 | None:intergenic | 55.0% |
| AAGGTCCGGGGTTCGAACCT+CGG | - | chr6_3:6488590-6488609 | Msa0935870:CDS | 60.0% | |
| AAGGTCCGGGGTTCGAACCT+CGG | - | chr6_3:6488590-6488609 | Msa0935870:CDS | 60.0% | |
| GGTGGCCGAGGTTCGAACCC+CGG | + | chr6_3:6488598-6488617 | None:intergenic | 70.0% | |
| GGTGGCCGAGGTTCGAACCC+CGG | + | chr6_3:6488598-6488617 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 6487181 | 6489056 | 6487181 | ID=Msa0935870;Name=Msa0935870 |
| chr6_3 | mRNA | 6487181 | 6489056 | 6487181 | ID=Msa0935870-mRNA-1;Parent=Msa0935870;Name=Msa0935870-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|334 |
| chr6_3 | exon | 6488285 | 6489056 | 6488285 | ID=Msa0935870-mRNA-1:exon:2048;Parent=Msa0935870-mRNA-1 |
| chr6_3 | exon | 6487181 | 6487413 | 6487181 | ID=Msa0935870-mRNA-1:exon:2047;Parent=Msa0935870-mRNA-1 |
| chr6_3 | CDS | 6488285 | 6489056 | 6488285 | ID=Msa0935870-mRNA-1:cds;Parent=Msa0935870-mRNA-1 |
| chr6_3 | CDS | 6487181 | 6487413 | 6487181 | ID=Msa0935870-mRNA-1:cds;Parent=Msa0935870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
