Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903420 | XP_003618349.1 | 91.265 | 332 | 29 | 0 | 1 | 332 | 1 | 332 | 0.0 | 624 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903420 | sp|P29136|MEP1_SOYBN | 40.283 | 283 | 137 | 6 | 50 | 329 | 48 | 301 | 8.77e-63 | 204 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0088800 | Msa0903420 | 0.803619 | 3.198001e-49 | -8.615850e-47 |
| Msa0180380 | Msa0903420 | 0.822876 | 1.873438e-53 | -8.615850e-47 |
| Msa0245660 | Msa0903420 | 0.811853 | 5.688407e-51 | -8.615850e-47 |
| Msa0322460 | Msa0903420 | 0.817841 | 2.675129e-52 | -8.615850e-47 |
| Msa0521870 | Msa0903420 | 0.802725 | 4.895494e-49 | -8.615850e-47 |
| Msa0870170 | Msa0903420 | 0.919403 | 4.703337e-87 | -8.615850e-47 |
| Msa0903420 | Msa0935870 | 0.897707 | 1.082994e-76 | -8.615850e-47 |
| Msa0903420 | Msa0972880 | 0.901245 | 3.254557e-78 | -8.615850e-47 |
| Msa0903420 | Msa1043660 | 0.800905 | 1.157162e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903420 | MtrunA17_Chr6g0451671 | 91.265 | 332 | 29 | 0 | 1 | 332 | 1 | 332 | 0.0 | 624 |
| Msa0903420 | MtrunA17_Chr5g0414891 | 37.458 | 299 | 150 | 6 | 42 | 329 | 53 | 325 | 1.87e-58 | 192 |
| Msa0903420 | MtrunA17_Chr8g0334661 | 38.255 | 298 | 147 | 7 | 41 | 329 | 37 | 306 | 2.45e-55 | 184 |
| Msa0903420 | MtrunA17_Chr8g0364281 | 35.159 | 347 | 171 | 10 | 6 | 329 | 47 | 362 | 2.67e-52 | 177 |
| Msa0903420 | MtrunA17_Chr5g0399301 | 36.207 | 290 | 147 | 9 | 47 | 329 | 54 | 312 | 4.70e-50 | 170 |
| Msa0903420 | MtrunA17_Chr5g0414641 | 31.724 | 290 | 154 | 9 | 46 | 329 | 67 | 318 | 3.57e-36 | 133 |
| Msa0903420 | MtrunA17_Chr5g0414771 | 28.788 | 264 | 142 | 9 | 53 | 308 | 3 | 228 | 9.52e-24 | 99.0 |
| Msa0903420 | MtrunA17_Chr5g0414657 | 27.148 | 291 | 175 | 9 | 48 | 333 | 55 | 313 | 1.07e-22 | 97.1 |
| Msa0903420 | MtrunA17_Chr5g0414654 | 27.707 | 314 | 154 | 11 | 3 | 308 | 1 | 249 | 2.14e-20 | 90.1 |
| Msa0903420 | MtrunA17_Chr5g0414661 | 25.874 | 286 | 163 | 10 | 57 | 329 | 35 | 284 | 2.86e-19 | 87.0 |
| Msa0903420 | MtrunA17_Chr5g0414791 | 27.703 | 296 | 150 | 13 | 30 | 308 | 57 | 305 | 3.42e-18 | 84.3 |
| Msa0903420 | MtrunA17_Chr5g0414821 | 25.472 | 318 | 169 | 12 | 39 | 329 | 96 | 372 | 2.97e-17 | 82.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0903420 | AT1G59970.1 | 37.500 | 296 | 155 | 6 | 39 | 329 | 43 | 313 | 3.53e-60 | 197 |
| Msa0903420 | AT4G16640.1 | 36.127 | 346 | 176 | 9 | 1 | 329 | 1 | 318 | 4.90e-56 | 186 |
| Msa0903420 | AT1G24140.1 | 34.783 | 345 | 175 | 10 | 12 | 329 | 7 | 328 | 3.68e-54 | 182 |
| Msa0903420 | AT1G70170.1 | 35.569 | 343 | 169 | 10 | 12 | 329 | 8 | 323 | 9.12e-54 | 181 |
| Msa0903420 | AT2G45040.1 | 37.193 | 285 | 129 | 8 | 56 | 329 | 50 | 295 | 6.03e-46 | 159 |
Find 82 sgRNAs with CRISPR-Local
Find 278 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTAAAAGAAGTAATAAA+AGG | 0.264052 | 6_2:+520630 | None:intergenic |
| GGTCTTCATGCTGGATTGTT+GGG | 0.280757 | 6_2:-518913 | Msa0903420:CDS |
| TAGTATCATGTTGAACATTT+AGG | 0.285246 | 6_2:+520462 | None:intergenic |
| CAAAAGGGACAAACACTAAA+AGG | 0.294871 | 6_2:-520524 | Msa0903420:CDS |
| AAGTGGAGCCTTCCATCTTC+TGG | 0.306584 | 6_2:+519972 | None:intergenic |
| TACTGTGTCCAAGCCCTAAA+AGG | 0.314707 | 6_2:+518806 | None:intergenic |
| TCTCCTTACACCTGCCCAAT+AGG | 0.318351 | 6_2:+518759 | None:intergenic |
| TTGCCGTAGCCGTTGGTCTT+TGG | 0.323120 | 6_2:+518872 | None:intergenic |
| AGGGATACATAGCTGCATTT+TGG | 0.323892 | 6_2:+518779 | None:intergenic |
| ATGCAGCTATGTATCCCTAT+TGG | 0.324355 | 6_2:-518774 | Msa0903420:CDS |
| TACGGCAAAACAATTTGATT+TGG | 0.328072 | 6_2:-518857 | Msa0903420:CDS |
| ATCTGTGGCTTTGCATGAAA+TGG | 0.342954 | 6_2:-518833 | Msa0903420:CDS |
| TTTCGTTTGTGACTATGTTT+TGG | 0.352077 | 6_2:+520287 | None:intergenic |
| TCTTCCAAGACTCACCAAAA+TGG | 0.357094 | 6_2:-520235 | Msa0903420:CDS |
| ACTTTGATGGAGACGAAAAC+TGG | 0.368546 | 6_2:-519953 | Msa0903420:CDS |
| CTTAAGACTTGTGGGATTGT+TGG | 0.378391 | 6_2:+519929 | None:intergenic |
| CAAAATGGAGAGACTCAAAA+AGG | 0.380859 | 6_2:-520220 | Msa0903420:CDS |
| ATTTCACATTCACGGAAGTT+GGG | 0.387217 | 6_2:-520097 | Msa0903420:CDS |
| AGGTCTTCATGCTGGATTGT+TGG | 0.390597 | 6_2:-518914 | Msa0903420:CDS |
| CTCCTTACACCTGCCCAATA+GGG | 0.395717 | 6_2:+518760 | None:intergenic |
| GATGGAAGGCTCCACTTTGA+TGG | 0.398360 | 6_2:-519966 | Msa0903420:CDS |
| TACCATCACCTACATGTAAC+TGG | 0.404024 | 6_2:-520371 | Msa0903420:CDS |
| AAGTTATCCTTAAGACTTGT+GGG | 0.410453 | 6_2:+519921 | None:intergenic |
| AAGTGTTAATGTGTTGAGTA+TGG | 0.418392 | 6_2:-520174 | Msa0903420:CDS |
| CAACAATCCCACAAGTCTTA+AGG | 0.419763 | 6_2:-519928 | Msa0903420:CDS |
| GATTTCACATTCACGGAAGT+TGG | 0.420328 | 6_2:-520098 | Msa0903420:CDS |
| CTTGACTCAACAATGGGAAA+TGG | 0.421686 | 6_2:+520605 | None:intergenic |
| AAACCTCAAAGGTGTTCAAA+AGG | 0.423946 | 6_2:-520540 | Msa0903420:CDS |
| TGCAGCTATGTATCCCTATT+GGG | 0.424514 | 6_2:-518773 | Msa0903420:CDS |
| ATCACTATATCGGTCGAGTT+GGG | 0.425212 | 6_2:+520071 | None:intergenic |
| ACATTTCCTGGCCCATCAAA+AGG | 0.433183 | 6_2:+520014 | None:intergenic |
| GTATGAGCTAGAACATTTCC+TGG | 0.435265 | 6_2:+520002 | None:intergenic |
| ATTATTTCAGGTCTTCATGC+TGG | 0.444176 | 6_2:-518922 | Msa0903420:intron |
| ATCCCTATTGGGCAGGTGTA+AGG | 0.446624 | 6_2:-518762 | Msa0903420:CDS |
| ATGGTTCTTGACTCAACAAT+GGG | 0.446939 | 6_2:+520599 | None:intergenic |
| AAACATAGTCACAAACGAAA+TGG | 0.450671 | 6_2:-520284 | Msa0903420:CDS |
| TGATTCCATCCACATCATCT+TGG | 0.462472 | 6_2:+518728 | None:intergenic |
| ACAAGTCTTAAGGATAACTT+TGG | 0.471399 | 6_2:-519918 | Msa0903420:intron |
| CATACTTTCCCTCCAGAAGA+TGG | 0.473529 | 6_2:-519984 | Msa0903420:CDS |
| ACAATTTGATTTGGAATCTG+TGG | 0.478019 | 6_2:-518848 | Msa0903420:CDS |
| GTGAAATCCGATCACTATAT+CGG | 0.481999 | 6_2:+520061 | None:intergenic |
| CGTAGCCGTTGGTCTTTGGA+AGG | 0.484074 | 6_2:+518876 | None:intergenic |
| GTATGTTTGAAAATCTTTGA+GGG | 0.484231 | 6_2:+520391 | None:intergenic |
| AGTTTGGATGAATGAATCCT+TGG | 0.492194 | 6_2:+520568 | None:intergenic |
| AGTTAGTGATTTCACATTCA+CGG | 0.518564 | 6_2:-520105 | Msa0903420:CDS |
| GTCTTCATGCTGGATTGTTG+GGG | 0.519679 | 6_2:-518912 | Msa0903420:CDS |
| AAGAAGTAATAAAAGGAAAG+AGG | 0.519969 | 6_2:+520637 | None:intergenic |
| AACCTCAAAGGTGTTCAAAA+GGG | 0.530859 | 6_2:-520539 | Msa0903420:CDS |
| GGTATGTTTGAAAATCTTTG+AGG | 0.532790 | 6_2:+520390 | None:intergenic |
| TTGGATGAATGAATCCTTGG+AGG | 0.534533 | 6_2:+520571 | None:intergenic |
| GCTATGTATCCCTATTGGGC+AGG | 0.543151 | 6_2:-518769 | Msa0903420:CDS |
| AAAATGGTCGTTTAGAGTAG+TGG | 0.547135 | 6_2:+520433 | None:intergenic |
| GATCACTATATCGGTCGAGT+TGG | 0.554063 | 6_2:+520070 | None:intergenic |
| TCTGTGGCTTTGCATGAAAT+GGG | 0.554545 | 6_2:-518832 | Msa0903420:CDS |
| CATTTCCTGGCCCATCAAAA+GGG | 0.556591 | 6_2:+520015 | None:intergenic |
| AGATGATGTGGATGGAATCA+TGG | 0.557045 | 6_2:-518725 | Msa0903420:CDS |
| GGACAAACACTAAAAGGCAT+TGG | 0.557998 | 6_2:-520518 | Msa0903420:CDS |
| AAAGTTATCCTTAAGACTTG+TGG | 0.558696 | 6_2:+519920 | None:intergenic |
| CAAACTCTTCAAAACCTCAA+AGG | 0.558738 | 6_2:-520551 | Msa0903420:CDS |
| CTAAACCAAGATGATGTGGA+TGG | 0.563005 | 6_2:-518733 | Msa0903420:CDS |
| TATGGTTCTTGACTCAACAA+TGG | 0.565742 | 6_2:+520598 | None:intergenic |
| TGGTCGTTTAGAGTAGTGGA+AGG | 0.570994 | 6_2:+520437 | None:intergenic |
| TTTCACATTCACGGAAGTTG+GGG | 0.572167 | 6_2:-520096 | Msa0903420:CDS |
| ATCTTGAGTCTTCCACGTTG+TGG | 0.572692 | 6_2:-520323 | Msa0903420:CDS |
| CTTCCAAAGACCAACGGCTA+CGG | 0.579541 | 6_2:-518875 | Msa0903420:CDS |
| AAATCTAAACCAAGATGATG+TGG | 0.581039 | 6_2:-518737 | Msa0903420:CDS |
| TGGATGAATGAATCCTTGGA+GGG | 0.581953 | 6_2:+520572 | None:intergenic |
| TCATGCTGGATTGTTGGGGA+AGG | 0.584729 | 6_2:-518908 | Msa0903420:CDS |
| CAAACGAAATGGTTTAGTGA+TGG | 0.584740 | 6_2:-520273 | Msa0903420:CDS |
| TGGAGCCTTCCATCTTCTGG+AGG | 0.591987 | 6_2:+519975 | None:intergenic |
| GGATTTCACCATGGTGATCA+CGG | 0.597300 | 6_2:-520047 | Msa0903420:CDS |
| AAGAACCATAAAACCCTCCA+AGG | 0.602568 | 6_2:-520585 | Msa0903420:CDS |
| GTAGCCGTTGGTCTTTGGAA+GGG | 0.606243 | 6_2:+518877 | None:intergenic |
| CTTTCCCTCCAGAAGATGGA+AGG | 0.609700 | 6_2:-519980 | Msa0903420:CDS |
| AACTCGACCGATATAGTGAT+CGG | 0.611162 | 6_2:-520068 | Msa0903420:CDS |
| GGAGCCTTCCATCTTCTGGA+GGG | 0.638922 | 6_2:+519976 | None:intergenic |
| GACCAGTTACATGTAGGTGA+TGG | 0.653297 | 6_2:+520369 | None:intergenic |
| TATTCCCTTCCAAAGACCAA+CGG | 0.657183 | 6_2:-518881 | Msa0903420:CDS |
| AAATATCACCGTGATCACCA+TGG | 0.688526 | 6_2:+520039 | None:intergenic |
| CTACACGACCAGTTACATGT+AGG | 0.697312 | 6_2:+520363 | None:intergenic |
| ATAGTGATCGGATTTCACCA+TGG | 0.731745 | 6_2:-520056 | Msa0903420:CDS |
| AAATCAGGGACACCACAACG+TGG | 0.751509 | 6_2:+520311 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATATTTTATTAAAATTATAA+AGG | + | chr6_2:519728-519747 | None:intergenic | 0.0% |
| !!! | ATATTTTATTAAAATTATAA+AGG | + | chr6_2:519728-519747 | None:intergenic | 0.0% |
| !! | TTAAATTTGTATTATCATTA+TGG | + | chr6_2:520002-520021 | None:intergenic | 10.0% |
| !!! | AAATTTAATGTACAATTTTT+AGG | - | chr6_2:520014-520033 | Msa0903420:CDS | 10.0% |
| !!! | ATTTTTTAAAAAAAAAACTC+CGG | - | chr6_2:520224-520243 | Msa0903420:CDS | 10.0% |
| !! | TTAAATTTGTATTATCATTA+TGG | + | chr6_2:520002-520021 | None:intergenic | 10.0% |
| !!! | AAATTTAATGTACAATTTTT+AGG | - | chr6_2:520014-520033 | Msa0903420:CDS | 10.0% |
| !!! | ATTTTTTAAAAAAAAAACTC+CGG | - | chr6_2:520224-520243 | Msa0903420:CDS | 10.0% |
| !!! | TTTCTAAAAGAAGTAATAAA+AGG | + | chr6_2:518740-518759 | None:intergenic | 15.0% |
| !! | AAAAATTACCTTAAAAGATT+TGG | - | chr6_2:518879-518898 | Msa0903420:CDS | 15.0% |
| !! | CTTTATCATCTAATAAAAAA+AGG | - | chr6_2:519577-519596 | Msa0903420:intron | 15.0% |
| !! | ATTATGTATCAAAGTTTAAA+CGG | - | chr6_2:519936-519955 | Msa0903420:CDS | 15.0% |
| !!! | TTTCTAAAAGAAGTAATAAA+AGG | + | chr6_2:518740-518759 | None:intergenic | 15.0% |
| !! | AAAAATTACCTTAAAAGATT+TGG | - | chr6_2:518879-518898 | Msa0903420:CDS | 15.0% |
| !! | CTTTATCATCTAATAAAAAA+AGG | - | chr6_2:519577-519596 | Msa0903420:intron | 15.0% |
| !! | ATTATGTATCAAAGTTTAAA+CGG | - | chr6_2:519936-519955 | Msa0903420:CDS | 15.0% |
| !!! | AATTTTTAGGTTATCATGTT+AGG | - | chr6_2:520027-520046 | Msa0903420:CDS | 20.0% |
| !!! | ATTTTTAGGTTATCATGTTA+GGG | - | chr6_2:520028-520047 | Msa0903420:CDS | 20.0% |
| !!! | CAATTTTTTTCTTCATAAAC+CGG | + | chr6_2:520246-520265 | None:intergenic | 20.0% |
| !! | ATGAAGAAAAAAATTGTTAG+AGG | - | chr6_2:520250-520269 | Msa0903420:CDS | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_2:520301-520320 | None:intergenic | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_2:520301-520320 | None:intergenic | 20.0% |
| !!! | TCAAATTGTTTCAAACTTTT+TGG | - | chr6_2:520382-520401 | Msa0903420:CDS | 20.0% |
| !! | ACTACAACAAAAATTATTTC+AGG | - | chr6_2:520433-520452 | Msa0903420:CDS | 20.0% |
| !!! | AATTTTTAGGTTATCATGTT+AGG | - | chr6_2:520027-520046 | Msa0903420:CDS | 20.0% |
| !!! | ATTTTTAGGTTATCATGTTA+GGG | - | chr6_2:520028-520047 | Msa0903420:CDS | 20.0% |
| !!! | CAATTTTTTTCTTCATAAAC+CGG | + | chr6_2:520246-520265 | None:intergenic | 20.0% |
| !! | ATGAAGAAAAAAATTGTTAG+AGG | - | chr6_2:520250-520269 | Msa0903420:CDS | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_2:520301-520320 | None:intergenic | 20.0% |
| !! | AAGCACTAATTACTAATTAA+AGG | + | chr6_2:520301-520320 | None:intergenic | 20.0% |
| !!! | TCAAATTGTTTCAAACTTTT+TGG | - | chr6_2:520382-520401 | Msa0903420:CDS | 20.0% |
| !! | ACTACAACAAAAATTATTTC+AGG | - | chr6_2:520433-520452 | Msa0903420:CDS | 20.0% |
| ! | AAGAAGTAATAAAAGGAAAG+AGG | + | chr6_2:518733-518752 | None:intergenic | 25.0% |
| ! | TAGTATCATGTTGAACATTT+AGG | + | chr6_2:518908-518927 | None:intergenic | 25.0% |
| !! | ATTCCAAGTTTTCATCAAAA+TGG | + | chr6_2:518953-518972 | None:intergenic | 25.0% |
| ! | GTATGTTTGAAAATCTTTGA+GGG | + | chr6_2:518979-518998 | None:intergenic | 25.0% |
| ! | TACTAGCATGAGAAATATTA+AGG | - | chr6_2:519851-519870 | Msa0903420:intron | 25.0% |
| ! | TTATAATATGAGATGAAAGG+AGG | - | chr6_2:519960-519979 | Msa0903420:CDS | 25.0% |
| ! | AAGAAGTAATAAAAGGAAAG+AGG | + | chr6_2:518733-518752 | None:intergenic | 25.0% |
| ! | TAGTATCATGTTGAACATTT+AGG | + | chr6_2:518908-518927 | None:intergenic | 25.0% |
| !! | ATTCCAAGTTTTCATCAAAA+TGG | + | chr6_2:518953-518972 | None:intergenic | 25.0% |
| ! | GTATGTTTGAAAATCTTTGA+GGG | + | chr6_2:518979-518998 | None:intergenic | 25.0% |
| ! | TACTAGCATGAGAAATATTA+AGG | - | chr6_2:519851-519870 | Msa0903420:intron | 25.0% |
| ! | TTATAATATGAGATGAAAGG+AGG | - | chr6_2:519960-519979 | Msa0903420:CDS | 25.0% |
| ! | TTAGGTAGCCAAATCTTTTA+AGG | + | chr6_2:518890-518909 | None:intergenic | 30.0% |
| GGTATGTTTGAAAATCTTTG+AGG | + | chr6_2:518980-518999 | None:intergenic | 30.0% | |
| ! | TGGAAGACTCAAGATTTTTA+TGG | + | chr6_2:519039-519058 | None:intergenic | 30.0% |
| !!! | GACTATGTTTTGGTAAATCA+GGG | + | chr6_2:519073-519092 | None:intergenic | 30.0% |
| !!! | TGACTATGTTTTGGTAAATC+AGG | + | chr6_2:519074-519093 | None:intergenic | 30.0% |
| ! | TTTCGTTTGTGACTATGTTT+TGG | + | chr6_2:519083-519102 | None:intergenic | 30.0% |
| AAACATAGTCACAAACGAAA+TGG | - | chr6_2:519083-519102 | Msa0903420:intron | 30.0% | |
| AAGTGTTAATGTGTTGAGTA+TGG | - | chr6_2:519193-519212 | Msa0903420:intron | 30.0% | |
| AGTTAGTGATTTCACATTCA+CGG | - | chr6_2:519262-519281 | Msa0903420:intron | 30.0% | |
| ! | GTGATATTTACCCTTTTGAT+GGG | - | chr6_2:519342-519361 | Msa0903420:intron | 30.0% |
| AAGTTATCCTTAAGACTTGT+GGG | + | chr6_2:519449-519468 | None:intergenic | 30.0% | |
| AAAGTTATCCTTAAGACTTG+TGG | + | chr6_2:519450-519469 | None:intergenic | 30.0% | |
| ACAAGTCTTAAGGATAACTT+TGG | - | chr6_2:519449-519468 | Msa0903420:intron | 30.0% | |
| GGCTTATAATATGAGATGAA+AGG | - | chr6_2:519957-519976 | Msa0903420:CDS | 30.0% | |
| TGCATAAAATATGCAAAGTC+CGG | - | chr6_2:520119-520138 | Msa0903420:CDS | 30.0% | |
| !!! | AATACCACCGTAGATTTTTT+TGG | + | chr6_2:520165-520184 | None:intergenic | 30.0% |
| TACGGCAAAACAATTTGATT+TGG | - | chr6_2:520510-520529 | Msa0903420:CDS | 30.0% | |
| !! | ACAATTTGATTTGGAATCTG+TGG | - | chr6_2:520519-520538 | Msa0903420:CDS | 30.0% |
| AAATCTAAACCAAGATGATG+TGG | - | chr6_2:520630-520649 | Msa0903420:CDS | 30.0% | |
| ! | TTAGGTAGCCAAATCTTTTA+AGG | + | chr6_2:518890-518909 | None:intergenic | 30.0% |
| GGTATGTTTGAAAATCTTTG+AGG | + | chr6_2:518980-518999 | None:intergenic | 30.0% | |
| ! | TGGAAGACTCAAGATTTTTA+TGG | + | chr6_2:519039-519058 | None:intergenic | 30.0% |
| !!! | GACTATGTTTTGGTAAATCA+GGG | + | chr6_2:519073-519092 | None:intergenic | 30.0% |
| !!! | TGACTATGTTTTGGTAAATC+AGG | + | chr6_2:519074-519093 | None:intergenic | 30.0% |
| ! | TTTCGTTTGTGACTATGTTT+TGG | + | chr6_2:519083-519102 | None:intergenic | 30.0% |
| AAACATAGTCACAAACGAAA+TGG | - | chr6_2:519083-519102 | Msa0903420:intron | 30.0% | |
| AAGTGTTAATGTGTTGAGTA+TGG | - | chr6_2:519193-519212 | Msa0903420:intron | 30.0% | |
| AGTTAGTGATTTCACATTCA+CGG | - | chr6_2:519262-519281 | Msa0903420:intron | 30.0% | |
| ! | GTGATATTTACCCTTTTGAT+GGG | - | chr6_2:519342-519361 | Msa0903420:intron | 30.0% |
| AAGTTATCCTTAAGACTTGT+GGG | + | chr6_2:519449-519468 | None:intergenic | 30.0% | |
| AAAGTTATCCTTAAGACTTG+TGG | + | chr6_2:519450-519469 | None:intergenic | 30.0% | |
| ACAAGTCTTAAGGATAACTT+TGG | - | chr6_2:519449-519468 | Msa0903420:intron | 30.0% | |
| GGCTTATAATATGAGATGAA+AGG | - | chr6_2:519957-519976 | Msa0903420:CDS | 30.0% | |
| TGCATAAAATATGCAAAGTC+CGG | - | chr6_2:520119-520138 | Msa0903420:CDS | 30.0% | |
| !!! | AATACCACCGTAGATTTTTT+TGG | + | chr6_2:520165-520184 | None:intergenic | 30.0% |
| TACGGCAAAACAATTTGATT+TGG | - | chr6_2:520510-520529 | Msa0903420:CDS | 30.0% | |
| !! | ACAATTTGATTTGGAATCTG+TGG | - | chr6_2:520519-520538 | Msa0903420:CDS | 30.0% |
| AAATCTAAACCAAGATGATG+TGG | - | chr6_2:520630-520649 | Msa0903420:CDS | 30.0% | |
| ATGGTTCTTGACTCAACAAT+GGG | + | chr6_2:518771-518790 | None:intergenic | 35.0% | |
| TATGGTTCTTGACTCAACAA+TGG | + | chr6_2:518772-518791 | None:intergenic | 35.0% | |
| AGTTTGGATGAATGAATCCT+TGG | + | chr6_2:518802-518821 | None:intergenic | 35.0% | |
| !!! | CTTTGAGGTTTTGAAGAGTT+TGG | + | chr6_2:518818-518837 | None:intergenic | 35.0% |
| CAAACTCTTCAAAACCTCAA+AGG | - | chr6_2:518816-518835 | Msa0903420:CDS | 35.0% | |
| !! | AAACCTCAAAGGTGTTCAAA+AGG | - | chr6_2:518827-518846 | Msa0903420:CDS | 35.0% |
| !! | AACCTCAAAGGTGTTCAAAA+GGG | - | chr6_2:518828-518847 | Msa0903420:CDS | 35.0% |
| CAAAAGGGACAAACACTAAA+AGG | - | chr6_2:518843-518862 | Msa0903420:CDS | 35.0% | |
| ! | AAAATGGTCGTTTAGAGTAG+TGG | + | chr6_2:518937-518956 | None:intergenic | 35.0% |
| !! | CGACCATTTTGATGAAAACT+TGG | - | chr6_2:518947-518966 | Msa0903420:intron | 35.0% |
| CAAACGAAATGGTTTAGTGA+TGG | - | chr6_2:519094-519113 | Msa0903420:intron | 35.0% | |
| !!! | CTTTTTGAGTCTCTCCATTT+TGG | + | chr6_2:519149-519168 | None:intergenic | 35.0% |
| CAAAATGGAGAGACTCAAAA+AGG | - | chr6_2:519147-519166 | Msa0903420:intron | 35.0% | |
| ATTTCACATTCACGGAAGTT+GGG | - | chr6_2:519270-519289 | Msa0903420:intron | 35.0% | |
| GTGAAATCCGATCACTATAT+CGG | + | chr6_2:519309-519328 | None:intergenic | 35.0% | |
| ! | GGTGATATTTACCCTTTTGA+TGG | - | chr6_2:519341-519360 | Msa0903420:intron | 35.0% |
| TCTCTGCTTCATGTTATAAG+TGG | - | chr6_2:519671-519690 | Msa0903420:intron | 35.0% | |
| TAGATTGATACAAGCGTTAG+AGG | + | chr6_2:520060-520079 | None:intergenic | 35.0% | |
| TAACGCTTGTATCAATCTAC+TGG | - | chr6_2:520061-520080 | Msa0903420:CDS | 35.0% | |
| GCATAAAATATGCAAAGTCC+GGG | - | chr6_2:520120-520139 | Msa0903420:CDS | 35.0% | |
| CATAAAATATGCAAAGTCCG+GGG | - | chr6_2:520121-520140 | Msa0903420:CDS | 35.0% | |
| ! | ATTATTTCAGGTCTTCATGC+TGG | - | chr6_2:520445-520464 | Msa0903420:CDS | 35.0% |
| ! | ATGAAATGGGTCACCTTTTA+GGG | - | chr6_2:520548-520567 | Msa0903420:CDS | 35.0% |
| ATGGTTCTTGACTCAACAAT+GGG | + | chr6_2:518771-518790 | None:intergenic | 35.0% | |
| TATGGTTCTTGACTCAACAA+TGG | + | chr6_2:518772-518791 | None:intergenic | 35.0% | |
| AGTTTGGATGAATGAATCCT+TGG | + | chr6_2:518802-518821 | None:intergenic | 35.0% | |
| !!! | CTTTGAGGTTTTGAAGAGTT+TGG | + | chr6_2:518818-518837 | None:intergenic | 35.0% |
| CAAACTCTTCAAAACCTCAA+AGG | - | chr6_2:518816-518835 | Msa0903420:CDS | 35.0% | |
| !! | AAACCTCAAAGGTGTTCAAA+AGG | - | chr6_2:518827-518846 | Msa0903420:CDS | 35.0% |
| !! | AACCTCAAAGGTGTTCAAAA+GGG | - | chr6_2:518828-518847 | Msa0903420:CDS | 35.0% |
| CAAAAGGGACAAACACTAAA+AGG | - | chr6_2:518843-518862 | Msa0903420:CDS | 35.0% | |
| ! | AAAATGGTCGTTTAGAGTAG+TGG | + | chr6_2:518937-518956 | None:intergenic | 35.0% |
| !! | CGACCATTTTGATGAAAACT+TGG | - | chr6_2:518947-518966 | Msa0903420:intron | 35.0% |
| CAAACGAAATGGTTTAGTGA+TGG | - | chr6_2:519094-519113 | Msa0903420:intron | 35.0% | |
| !!! | CTTTTTGAGTCTCTCCATTT+TGG | + | chr6_2:519149-519168 | None:intergenic | 35.0% |
| CAAAATGGAGAGACTCAAAA+AGG | - | chr6_2:519147-519166 | Msa0903420:intron | 35.0% | |
| ATTTCACATTCACGGAAGTT+GGG | - | chr6_2:519270-519289 | Msa0903420:intron | 35.0% | |
| GTGAAATCCGATCACTATAT+CGG | + | chr6_2:519309-519328 | None:intergenic | 35.0% | |
| ! | GGTGATATTTACCCTTTTGA+TGG | - | chr6_2:519341-519360 | Msa0903420:intron | 35.0% |
| TCTCTGCTTCATGTTATAAG+TGG | - | chr6_2:519671-519690 | Msa0903420:intron | 35.0% | |
| TAGATTGATACAAGCGTTAG+AGG | + | chr6_2:520060-520079 | None:intergenic | 35.0% | |
| TAACGCTTGTATCAATCTAC+TGG | - | chr6_2:520061-520080 | Msa0903420:CDS | 35.0% | |
| GCATAAAATATGCAAAGTCC+GGG | - | chr6_2:520120-520139 | Msa0903420:CDS | 35.0% | |
| CATAAAATATGCAAAGTCCG+GGG | - | chr6_2:520121-520140 | Msa0903420:CDS | 35.0% | |
| ! | ATTATTTCAGGTCTTCATGC+TGG | - | chr6_2:520445-520464 | Msa0903420:CDS | 35.0% |
| ! | ATGAAATGGGTCACCTTTTA+GGG | - | chr6_2:520548-520567 | Msa0903420:CDS | 35.0% |
| CTTGACTCAACAATGGGAAA+TGG | + | chr6_2:518765-518784 | None:intergenic | 40.0% | |
| AAGAACCATAAAACCCTCCA+AGG | - | chr6_2:518782-518801 | Msa0903420:CDS | 40.0% | |
| ! | TGAATCCTTGGAGGGTTTTA+TGG | + | chr6_2:518790-518809 | None:intergenic | 40.0% |
| TGGATGAATGAATCCTTGGA+GGG | + | chr6_2:518798-518817 | None:intergenic | 40.0% | |
| TTGGATGAATGAATCCTTGG+AGG | + | chr6_2:518799-518818 | None:intergenic | 40.0% | |
| ! | GGACAAACACTAAAAGGCAT+TGG | - | chr6_2:518849-518868 | Msa0903420:CDS | 40.0% |
| TACCATCACCTACATGTAAC+TGG | - | chr6_2:518996-519015 | Msa0903420:intron | 40.0% | |
| ! | TTTTGGTGAGTCTTGGAAGA+AGG | + | chr6_2:519132-519151 | None:intergenic | 40.0% |
| TCTTCCAAGACTCACCAAAA+TGG | - | chr6_2:519132-519151 | Msa0903420:intron | 40.0% | |
| !!! | GTGAGAACGCGTTTTTAAGT+TGG | - | chr6_2:519234-519253 | Msa0903420:intron | 40.0% |
| !!! | GAACGCGTTTTTAAGTTGGT+CGG | - | chr6_2:519238-519257 | Msa0903420:intron | 40.0% |
| GATTTCACATTCACGGAAGT+TGG | - | chr6_2:519269-519288 | Msa0903420:intron | 40.0% | |
| TTTCACATTCACGGAAGTTG+GGG | - | chr6_2:519271-519290 | Msa0903420:intron | 40.0% | |
| ATCACTATATCGGTCGAGTT+GGG | + | chr6_2:519299-519318 | None:intergenic | 40.0% | |
| AACTCGACCGATATAGTGAT+CGG | - | chr6_2:519299-519318 | Msa0903420:intron | 40.0% | |
| ATAGTGATCGGATTTCACCA+TGG | - | chr6_2:519311-519330 | Msa0903420:intron | 40.0% | |
| AAATATCACCGTGATCACCA+TGG | + | chr6_2:519331-519350 | None:intergenic | 40.0% | |
| GTATGAGCTAGAACATTTCC+TGG | + | chr6_2:519368-519387 | None:intergenic | 40.0% | |
| ! | AGTTTTCGTCTCCATCAAAG+TGG | + | chr6_2:519415-519434 | None:intergenic | 40.0% |
| ACTTTGATGGAGACGAAAAC+TGG | - | chr6_2:519414-519433 | Msa0903420:intron | 40.0% | |
| CTTAAGACTTGTGGGATTGT+TGG | + | chr6_2:519441-519460 | None:intergenic | 40.0% | |
| CAACAATCCCACAAGTCTTA+AGG | - | chr6_2:519439-519458 | Msa0903420:intron | 40.0% | |
| GCCACCACCAAAAAAATCTA+CGG | - | chr6_2:520155-520174 | Msa0903420:CDS | 40.0% | |
| !!! | ACCGTAGATTTTTTTGGTGG+TGG | + | chr6_2:520159-520178 | None:intergenic | 40.0% |
| ACCACCAAAAAAATCTACGG+TGG | - | chr6_2:520158-520177 | Msa0903420:CDS | 40.0% | |
| !!! | ACCACCGTAGATTTTTTTGG+TGG | + | chr6_2:520162-520181 | None:intergenic | 40.0% |
| TATTCCCTTCCAAAGACCAA+CGG | - | chr6_2:520486-520505 | Msa0903420:CDS | 40.0% | |
| ! | ATCTGTGGCTTTGCATGAAA+TGG | - | chr6_2:520534-520553 | Msa0903420:CDS | 40.0% |
| ! | TCTGTGGCTTTGCATGAAAT+GGG | - | chr6_2:520535-520554 | Msa0903420:CDS | 40.0% |
| ! | CATGAAATGGGTCACCTTTT+AGG | - | chr6_2:520547-520566 | Msa0903420:CDS | 40.0% |
| ! | AGGGATACATAGCTGCATTT+TGG | + | chr6_2:520591-520610 | None:intergenic | 40.0% |
| ATGCAGCTATGTATCCCTAT+TGG | - | chr6_2:520593-520612 | Msa0903420:CDS | 40.0% | |
| TGCAGCTATGTATCCCTATT+GGG | - | chr6_2:520594-520613 | Msa0903420:CDS | 40.0% | |
| CTAAACCAAGATGATGTGGA+TGG | - | chr6_2:520634-520653 | Msa0903420:CDS | 40.0% | |
| TGATTCCATCCACATCATCT+TGG | + | chr6_2:520642-520661 | None:intergenic | 40.0% | |
| AGATGATGTGGATGGAATCA+TGG | - | chr6_2:520642-520661 | Msa0903420:CDS | 40.0% | |
| CTTGACTCAACAATGGGAAA+TGG | + | chr6_2:518765-518784 | None:intergenic | 40.0% | |
| AAGAACCATAAAACCCTCCA+AGG | - | chr6_2:518782-518801 | Msa0903420:CDS | 40.0% | |
| ! | TGAATCCTTGGAGGGTTTTA+TGG | + | chr6_2:518790-518809 | None:intergenic | 40.0% |
| TGGATGAATGAATCCTTGGA+GGG | + | chr6_2:518798-518817 | None:intergenic | 40.0% | |
| TTGGATGAATGAATCCTTGG+AGG | + | chr6_2:518799-518818 | None:intergenic | 40.0% | |
| ! | GGACAAACACTAAAAGGCAT+TGG | - | chr6_2:518849-518868 | Msa0903420:CDS | 40.0% |
| TACCATCACCTACATGTAAC+TGG | - | chr6_2:518996-519015 | Msa0903420:intron | 40.0% | |
| ! | TTTTGGTGAGTCTTGGAAGA+AGG | + | chr6_2:519132-519151 | None:intergenic | 40.0% |
| TCTTCCAAGACTCACCAAAA+TGG | - | chr6_2:519132-519151 | Msa0903420:intron | 40.0% | |
| !!! | GTGAGAACGCGTTTTTAAGT+TGG | - | chr6_2:519234-519253 | Msa0903420:intron | 40.0% |
| !!! | GAACGCGTTTTTAAGTTGGT+CGG | - | chr6_2:519238-519257 | Msa0903420:intron | 40.0% |
| GATTTCACATTCACGGAAGT+TGG | - | chr6_2:519269-519288 | Msa0903420:intron | 40.0% | |
| TTTCACATTCACGGAAGTTG+GGG | - | chr6_2:519271-519290 | Msa0903420:intron | 40.0% | |
| ATCACTATATCGGTCGAGTT+GGG | + | chr6_2:519299-519318 | None:intergenic | 40.0% | |
| AACTCGACCGATATAGTGAT+CGG | - | chr6_2:519299-519318 | Msa0903420:intron | 40.0% | |
| ATAGTGATCGGATTTCACCA+TGG | - | chr6_2:519311-519330 | Msa0903420:intron | 40.0% | |
| AAATATCACCGTGATCACCA+TGG | + | chr6_2:519331-519350 | None:intergenic | 40.0% | |
| GTATGAGCTAGAACATTTCC+TGG | + | chr6_2:519368-519387 | None:intergenic | 40.0% | |
| ! | AGTTTTCGTCTCCATCAAAG+TGG | + | chr6_2:519415-519434 | None:intergenic | 40.0% |
| ACTTTGATGGAGACGAAAAC+TGG | - | chr6_2:519414-519433 | Msa0903420:intron | 40.0% | |
| CTTAAGACTTGTGGGATTGT+TGG | + | chr6_2:519441-519460 | None:intergenic | 40.0% | |
| CAACAATCCCACAAGTCTTA+AGG | - | chr6_2:519439-519458 | Msa0903420:intron | 40.0% | |
| GCCACCACCAAAAAAATCTA+CGG | - | chr6_2:520155-520174 | Msa0903420:CDS | 40.0% | |
| !!! | ACCGTAGATTTTTTTGGTGG+TGG | + | chr6_2:520159-520178 | None:intergenic | 40.0% |
| ACCACCAAAAAAATCTACGG+TGG | - | chr6_2:520158-520177 | Msa0903420:CDS | 40.0% | |
| !!! | ACCACCGTAGATTTTTTTGG+TGG | + | chr6_2:520162-520181 | None:intergenic | 40.0% |
| TATTCCCTTCCAAAGACCAA+CGG | - | chr6_2:520486-520505 | Msa0903420:CDS | 40.0% | |
| ! | ATCTGTGGCTTTGCATGAAA+TGG | - | chr6_2:520534-520553 | Msa0903420:CDS | 40.0% |
| ! | TCTGTGGCTTTGCATGAAAT+GGG | - | chr6_2:520535-520554 | Msa0903420:CDS | 40.0% |
| ! | CATGAAATGGGTCACCTTTT+AGG | - | chr6_2:520547-520566 | Msa0903420:CDS | 40.0% |
| ! | AGGGATACATAGCTGCATTT+TGG | + | chr6_2:520591-520610 | None:intergenic | 40.0% |
| ATGCAGCTATGTATCCCTAT+TGG | - | chr6_2:520593-520612 | Msa0903420:CDS | 40.0% | |
| TGCAGCTATGTATCCCTATT+GGG | - | chr6_2:520594-520613 | Msa0903420:CDS | 40.0% | |
| CTAAACCAAGATGATGTGGA+TGG | - | chr6_2:520634-520653 | Msa0903420:CDS | 40.0% | |
| TGATTCCATCCACATCATCT+TGG | + | chr6_2:520642-520661 | None:intergenic | 40.0% | |
| AGATGATGTGGATGGAATCA+TGG | - | chr6_2:520642-520661 | Msa0903420:CDS | 40.0% | |
| ! | GTCCCTTTTGAACACCTTTG+AGG | + | chr6_2:518833-518852 | None:intergenic | 45.0% |
| ! | TGGTCGTTTAGAGTAGTGGA+AGG | + | chr6_2:518933-518952 | None:intergenic | 45.0% |
| GACCAGTTACATGTAGGTGA+TGG | + | chr6_2:519001-519020 | None:intergenic | 45.0% | |
| CTACACGACCAGTTACATGT+AGG | + | chr6_2:519007-519026 | None:intergenic | 45.0% | |
| ATCTTGAGTCTTCCACGTTG+TGG | - | chr6_2:519044-519063 | Msa0903420:intron | 45.0% | |
| !! | CTCTCCATTTTGGTGAGTCT+TGG | + | chr6_2:519139-519158 | None:intergenic | 45.0% |
| GATCACTATATCGGTCGAGT+TGG | + | chr6_2:519300-519319 | None:intergenic | 45.0% | |
| GGATTTCACCATGGTGATCA+CGG | - | chr6_2:519320-519339 | Msa0903420:intron | 45.0% | |
| !! | ATTTACCCTTTTGATGGGCC+AGG | - | chr6_2:519347-519366 | Msa0903420:intron | 45.0% |
| CATTTCCTGGCCCATCAAAA+GGG | + | chr6_2:519355-519374 | None:intergenic | 45.0% | |
| ACATTTCCTGGCCCATCAAA+AGG | + | chr6_2:519356-519375 | None:intergenic | 45.0% | |
| CATACTTTCCCTCCAGAAGA+TGG | - | chr6_2:519383-519402 | Msa0903420:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr6_2:520092-520111 | Msa0903420:CDS | 45.0% |
| AGGTCTTCATGCTGGATTGT+TGG | - | chr6_2:520453-520472 | Msa0903420:CDS | 45.0% | |
| GGTCTTCATGCTGGATTGTT+GGG | - | chr6_2:520454-520473 | Msa0903420:CDS | 45.0% | |
| GTCTTCATGCTGGATTGTTG+GGG | - | chr6_2:520455-520474 | Msa0903420:CDS | 45.0% | |
| !! | AATTGTTTTGCCGTAGCCGT+TGG | + | chr6_2:520505-520524 | None:intergenic | 45.0% |
| TACTGTGTCCAAGCCCTAAA+AGG | + | chr6_2:520564-520583 | None:intergenic | 45.0% | |
| ! | GTCCCTTTTGAACACCTTTG+AGG | + | chr6_2:518833-518852 | None:intergenic | 45.0% |
| ! | TGGTCGTTTAGAGTAGTGGA+AGG | + | chr6_2:518933-518952 | None:intergenic | 45.0% |
| GACCAGTTACATGTAGGTGA+TGG | + | chr6_2:519001-519020 | None:intergenic | 45.0% | |
| CTACACGACCAGTTACATGT+AGG | + | chr6_2:519007-519026 | None:intergenic | 45.0% | |
| ATCTTGAGTCTTCCACGTTG+TGG | - | chr6_2:519044-519063 | Msa0903420:intron | 45.0% | |
| !! | CTCTCCATTTTGGTGAGTCT+TGG | + | chr6_2:519139-519158 | None:intergenic | 45.0% |
| GATCACTATATCGGTCGAGT+TGG | + | chr6_2:519300-519319 | None:intergenic | 45.0% | |
| GGATTTCACCATGGTGATCA+CGG | - | chr6_2:519320-519339 | Msa0903420:intron | 45.0% | |
| !! | ATTTACCCTTTTGATGGGCC+AGG | - | chr6_2:519347-519366 | Msa0903420:intron | 45.0% |
| CATTTCCTGGCCCATCAAAA+GGG | + | chr6_2:519355-519374 | None:intergenic | 45.0% | |
| ACATTTCCTGGCCCATCAAA+AGG | + | chr6_2:519356-519375 | None:intergenic | 45.0% | |
| CATACTTTCCCTCCAGAAGA+TGG | - | chr6_2:519383-519402 | Msa0903420:intron | 45.0% | |
| ! | TGAGCTTAGCTCAGTTGGTA+TGG | - | chr6_2:520092-520111 | Msa0903420:CDS | 45.0% |
| AGGTCTTCATGCTGGATTGT+TGG | - | chr6_2:520453-520472 | Msa0903420:CDS | 45.0% | |
| GGTCTTCATGCTGGATTGTT+GGG | - | chr6_2:520454-520473 | Msa0903420:CDS | 45.0% | |
| GTCTTCATGCTGGATTGTTG+GGG | - | chr6_2:520455-520474 | Msa0903420:CDS | 45.0% | |
| !! | AATTGTTTTGCCGTAGCCGT+TGG | + | chr6_2:520505-520524 | None:intergenic | 45.0% |
| TACTGTGTCCAAGCCCTAAA+AGG | + | chr6_2:520564-520583 | None:intergenic | 45.0% | |
| AAATCAGGGACACCACAACG+TGG | + | chr6_2:519059-519078 | None:intergenic | 50.0% | |
| CTTTCCCTCCAGAAGATGGA+AGG | - | chr6_2:519387-519406 | Msa0903420:intron | 50.0% | |
| AAGTGGAGCCTTCCATCTTC+TGG | + | chr6_2:519398-519417 | None:intergenic | 50.0% | |
| GATGGAAGGCTCCACTTTGA+TGG | - | chr6_2:519401-519420 | Msa0903420:intron | 50.0% | |
| CCAACTGAGCTAAGCTCACA+AGG | + | chr6_2:520090-520109 | None:intergenic | 50.0% | |
| CCTTGTGAGCTTAGCTCAGT+TGG | - | chr6_2:520087-520106 | Msa0903420:CDS | 50.0% | |
| !!! | GATTTTTTTGGTGGTGGCCG+AGG | + | chr6_2:520153-520172 | None:intergenic | 50.0% |
| TCATGCTGGATTGTTGGGGA+AGG | - | chr6_2:520459-520478 | Msa0903420:CDS | 50.0% | |
| !! | GTAGCCGTTGGTCTTTGGAA+GGG | + | chr6_2:520493-520512 | None:intergenic | 50.0% |
| CTTCCAAAGACCAACGGCTA+CGG | - | chr6_2:520492-520511 | Msa0903420:CDS | 50.0% | |
| !!! | ATGGGTCACCTTTTAGGGCT+TGG | - | chr6_2:520553-520572 | Msa0903420:CDS | 50.0% |
| GCTATGTATCCCTATTGGGC+AGG | - | chr6_2:520598-520617 | Msa0903420:CDS | 50.0% | |
| ATCCCTATTGGGCAGGTGTA+AGG | - | chr6_2:520605-520624 | Msa0903420:CDS | 50.0% | |
| CTCCTTACACCTGCCCAATA+GGG | + | chr6_2:520610-520629 | None:intergenic | 50.0% | |
| TCTCCTTACACCTGCCCAAT+AGG | + | chr6_2:520611-520630 | None:intergenic | 50.0% | |
| AAATCAGGGACACCACAACG+TGG | + | chr6_2:519059-519078 | None:intergenic | 50.0% | |
| CTTTCCCTCCAGAAGATGGA+AGG | - | chr6_2:519387-519406 | Msa0903420:intron | 50.0% | |
| AAGTGGAGCCTTCCATCTTC+TGG | + | chr6_2:519398-519417 | None:intergenic | 50.0% | |
| GATGGAAGGCTCCACTTTGA+TGG | - | chr6_2:519401-519420 | Msa0903420:intron | 50.0% | |
| CCAACTGAGCTAAGCTCACA+AGG | + | chr6_2:520090-520109 | None:intergenic | 50.0% | |
| CCTTGTGAGCTTAGCTCAGT+TGG | - | chr6_2:520087-520106 | Msa0903420:CDS | 50.0% | |
| !!! | GATTTTTTTGGTGGTGGCCG+AGG | + | chr6_2:520153-520172 | None:intergenic | 50.0% |
| TCATGCTGGATTGTTGGGGA+AGG | - | chr6_2:520459-520478 | Msa0903420:CDS | 50.0% | |
| !! | GTAGCCGTTGGTCTTTGGAA+GGG | + | chr6_2:520493-520512 | None:intergenic | 50.0% |
| CTTCCAAAGACCAACGGCTA+CGG | - | chr6_2:520492-520511 | Msa0903420:CDS | 50.0% | |
| !!! | ATGGGTCACCTTTTAGGGCT+TGG | - | chr6_2:520553-520572 | Msa0903420:CDS | 50.0% |
| GCTATGTATCCCTATTGGGC+AGG | - | chr6_2:520598-520617 | Msa0903420:CDS | 50.0% | |
| ATCCCTATTGGGCAGGTGTA+AGG | - | chr6_2:520605-520624 | Msa0903420:CDS | 50.0% | |
| CTCCTTACACCTGCCCAATA+GGG | + | chr6_2:520610-520629 | None:intergenic | 50.0% | |
| TCTCCTTACACCTGCCCAAT+AGG | + | chr6_2:520611-520630 | None:intergenic | 50.0% | |
| GGAGCCTTCCATCTTCTGGA+GGG | + | chr6_2:519394-519413 | None:intergenic | 55.0% | |
| TGGAGCCTTCCATCTTCTGG+AGG | + | chr6_2:519395-519414 | None:intergenic | 55.0% | |
| AAAGTCCGGGGTTCGAACCT+CGG | - | chr6_2:520133-520152 | Msa0903420:CDS | 55.0% | |
| !! | CGTAGCCGTTGGTCTTTGGA+AGG | + | chr6_2:520494-520513 | None:intergenic | 55.0% |
| !! | TTGCCGTAGCCGTTGGTCTT+TGG | + | chr6_2:520498-520517 | None:intergenic | 55.0% |
| GGAGCCTTCCATCTTCTGGA+GGG | + | chr6_2:519394-519413 | None:intergenic | 55.0% | |
| TGGAGCCTTCCATCTTCTGG+AGG | + | chr6_2:519395-519414 | None:intergenic | 55.0% | |
| AAAGTCCGGGGTTCGAACCT+CGG | - | chr6_2:520133-520152 | Msa0903420:CDS | 55.0% | |
| !! | CGTAGCCGTTGGTCTTTGGA+AGG | + | chr6_2:520494-520513 | None:intergenic | 55.0% |
| !! | TTGCCGTAGCCGTTGGTCTT+TGG | + | chr6_2:520498-520517 | None:intergenic | 55.0% |
| GGTGGCCGAGGTTCGAACCC+CGG | + | chr6_2:520141-520160 | None:intergenic | 70.0% | |
| GGTGGCCGAGGTTCGAACCC+CGG | + | chr6_2:520141-520160 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_2 | gene | 518702 | 520687 | 518702 | ID=Msa0903420;Name=Msa0903420 |
| chr6_2 | mRNA | 518702 | 520687 | 518702 | ID=Msa0903420-mRNA-1;Parent=Msa0903420;Name=Msa0903420-mRNA-1;_AED=0.00;_eAED=0.00;_QI=0|0|0|1|1|1|2|0|333 |
| chr6_2 | exon | 519919 | 520687 | 519919 | ID=Msa0903420-mRNA-1:exon:271;Parent=Msa0903420-mRNA-1 |
| chr6_2 | exon | 518702 | 518934 | 518702 | ID=Msa0903420-mRNA-1:exon:270;Parent=Msa0903420-mRNA-1 |
| chr6_2 | CDS | 519919 | 520687 | 519919 | ID=Msa0903420-mRNA-1:cds;Parent=Msa0903420-mRNA-1 |
| chr6_2 | CDS | 518702 | 518934 | 518702 | ID=Msa0903420-mRNA-1:cds;Parent=Msa0903420-mRNA-1 |
| Gene Sequence |
| Protein sequence |
