Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956020 | GAU49407.1 | 44.207 | 328 | 164 | 5 | 132 | 440 | 43 | 370 | 1.27e-76 | 261 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0259870 | Msa0956020 | 0.884954 | 1.232444e-71 | -8.615850e-47 |
| Msa0887810 | Msa0956020 | 0.869548 | 2.850237e-66 | -8.615850e-47 |
| Msa0917830 | Msa0956020 | 0.909438 | 5.693994e-82 | -8.615850e-47 |
| Msa0956020 | Msa1109230 | 0.935515 | 7.509907e-97 | -8.615850e-47 |
| Msa0956020 | Msa1248720 | 0.928852 | 1.605405e-92 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0956020 | MtrunA17_Chr4g0039731 | 43.824 | 340 | 157 | 5 | 137 | 446 | 161 | 496 | 2.95e-74 | 248 |
| Msa0956020 | MtrunA17_Chr3g0086081 | 31.760 | 233 | 137 | 4 | 157 | 378 | 4 | 225 | 1.38e-27 | 112 |
| Msa0956020 | MtrunA17_Chr8g0345501 | 25.733 | 307 | 205 | 8 | 146 | 442 | 413 | 706 | 2.15e-22 | 100 |
| Msa0956020 | MtrunA17_Chr1g0168171 | 57.500 | 80 | 32 | 2 | 207 | 285 | 1 | 79 | 3.82e-22 | 90.5 |
| Msa0956020 | MtrunA17_Chr4g0010341 | 34.965 | 143 | 86 | 2 | 138 | 273 | 181 | 323 | 1.43e-21 | 97.1 |
| Msa0956020 | MtrunA17_Chr4g0025081 | 29.921 | 254 | 155 | 9 | 144 | 376 | 231 | 482 | 2.37e-20 | 93.6 |
| Msa0956020 | MtrunA17_Chr1g0176161 | 29.528 | 254 | 156 | 9 | 144 | 376 | 158 | 409 | 9.36e-20 | 91.7 |
| Msa0956020 | MtrunA17_Chr1g0179631 | 25.357 | 280 | 193 | 7 | 116 | 380 | 482 | 760 | 2.85e-12 | 68.9 |
| Msa0956020 | MtrunA17_Chr2g0322881 | 25.243 | 309 | 199 | 13 | 146 | 434 | 337 | 633 | 1.57e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 119 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATAATAGCATCTTTCTT+AGG | 0.145906 | 6_3:+61655446 | None:intergenic |
| GGCTATTAGGCGTCAATTTC+GGG | 0.176665 | 6_3:-61655267 | Msa0956020:CDS |
| GCATCCTCTCCCATCCATTT+AGG | 0.218415 | 6_3:+61654961 | None:intergenic |
| GAGAGAAACGACTTCAATTA+TGG | 0.254171 | 6_3:-61654039 | Msa0956020:CDS |
| GGACCACAATTGATGTCTTT+TGG | 0.259552 | 6_3:+61655723 | None:intergenic |
| TGGACGGCTGGTCGGGGAAG+TGG | 0.260132 | 6_3:+61655680 | None:intergenic |
| TGGCTATTAGGCGTCAATTT+CGG | 0.262175 | 6_3:-61655268 | Msa0956020:CDS |
| ATGCTGGTCTTCTTGAATAT+TGG | 0.281800 | 6_3:-61654936 | Msa0956020:CDS |
| CTCAATATGATGCGGAAATC+AGG | 0.302840 | 6_3:-61655056 | Msa0956020:CDS |
| GCTTACAAAAGTAAGAAATA+AGG | 0.306817 | 6_3:-61654992 | Msa0956020:CDS |
| CCATCCTGATGAACTCTTCT+TGG | 0.306942 | 6_3:-61654686 | Msa0956020:CDS |
| TTTAGGTTGGACGGCTGGTC+GGG | 0.310466 | 6_3:+61655673 | None:intergenic |
| CGAGGTAATTGTTATGGTAC+TGG | 0.324310 | 6_3:-61653992 | Msa0956020:CDS |
| ATAAAATACCCTTGACCAAT+TGG | 0.342640 | 6_3:+61655410 | None:intergenic |
| AAAAGGTTCCTCAAGATCTA+TGG | 0.354768 | 6_3:-61655226 | Msa0956020:CDS |
| CTACTGCTATGGAAGAATTC+AGG | 0.367453 | 6_3:-61653687 | Msa0956020:CDS |
| ATGCAATGAGGATGGCTATT+AGG | 0.367943 | 6_3:-61655280 | Msa0956020:CDS |
| GTTGGTGAGGTGGGCTCAAC+TGG | 0.370950 | 6_3:+61655749 | None:intergenic |
| TTATAATAGCATCTTTCTTA+GGG | 0.373281 | 6_3:+61655447 | None:intergenic |
| GTTGGCTACAACAAGTTTCC+TGG | 0.374689 | 6_3:+61655805 | None:intergenic |
| GCATGTCAGTAAGGCGCTTT+GGG | 0.375371 | 6_3:+61655013 | None:intergenic |
| TTGTCTCGAGGTAATTGTTA+TGG | 0.375766 | 6_3:-61653998 | Msa0956020:CDS |
| CAATTATGGGTAGATGTTGC+TGG | 0.379900 | 6_3:-61654025 | Msa0956020:CDS |
| GGGAAGTGGGATGGCTGGTC+GGG | 0.380978 | 6_3:+61655694 | None:intergenic |
| CTTACAAAAGTAAGAAATAA+GGG | 0.382660 | 6_3:-61654991 | Msa0956020:CDS |
| AAACAAGACTAGTCGGGGTT+CGG | 0.393598 | 6_3:-61654881 | Msa0956020:CDS |
| AGCATGTCAGTAAGGCGCTT+TGG | 0.396055 | 6_3:+61655012 | None:intergenic |
| AACAAGACTAGTCGGGGTTC+GGG | 0.397002 | 6_3:-61654880 | Msa0956020:CDS |
| AATTATGGGTAGATGTTGCT+GGG | 0.404667 | 6_3:-61654024 | Msa0956020:CDS |
| GGTCGGGGAAGTGGGATGGC+TGG | 0.414065 | 6_3:+61655689 | None:intergenic |
| AGTGGGATGGCTGGTCGGGC+AGG | 0.414174 | 6_3:+61655698 | None:intergenic |
| GACTGACAGTGTAAAATACT+TGG | 0.426930 | 6_3:-61654718 | Msa0956020:intron |
| TCTGACAGGAATATGTTTCA+TGG | 0.431668 | 6_3:-61655083 | Msa0956020:intron |
| CAATCTTCGTTAGTTGAGTC+AGG | 0.432364 | 6_3:+61654098 | None:intergenic |
| CTTTAGGTTGGACGGCTGGT+CGG | 0.440694 | 6_3:+61655672 | None:intergenic |
| GGACGGCTGGTCGGGGAAGT+GGG | 0.440695 | 6_3:+61655681 | None:intergenic |
| GGGGAAGTGGGATGGCTGGT+CGG | 0.448275 | 6_3:+61655693 | None:intergenic |
| AAGATTGATGAGAATTCTAA+TGG | 0.450583 | 6_3:-61654082 | Msa0956020:CDS |
| GGATGGCTGGTCGGGCAGGT+TGG | 0.452958 | 6_3:+61655702 | None:intergenic |
| GAAAGGCAGTGCCAGCCCTT+TGG | 0.456127 | 6_3:-61656426 | Msa0956020:CDS |
| TTTCTTAGGGGCCTCTTGCT+CGG | 0.456169 | 6_3:+61655460 | None:intergenic |
| TTCACAAAACAAGACTAGTC+GGG | 0.460353 | 6_3:-61654887 | Msa0956020:CDS |
| ACTAGTCGGGGTTCGGGCAA+AGG | 0.464856 | 6_3:-61654874 | Msa0956020:CDS |
| TAAGAGGAAGTCTGGCGATT+GGG | 0.469252 | 6_3:-61654656 | Msa0956020:CDS |
| AGAGAAACGACTTCAATTAT+GGG | 0.470876 | 6_3:-61654038 | Msa0956020:CDS |
| GGCTGGTCGGGGAAGTGGGA+TGG | 0.472110 | 6_3:+61655685 | None:intergenic |
| GTAGCCAAGAAGAGTTCATC+AGG | 0.473619 | 6_3:+61654682 | None:intergenic |
| TACCTTTGAACGAGCATTGG+TGG | 0.478671 | 6_3:+61655856 | None:intergenic |
| TAAAATACCCTTGACCAATT+GGG | 0.480390 | 6_3:+61655411 | None:intergenic |
| AGATTTACACCTAGCAAAGA+TGG | 0.482324 | 6_3:-61655308 | Msa0956020:CDS |
| GAGGTAATTGTTATGGTACT+GGG | 0.483970 | 6_3:-61653991 | Msa0956020:CDS |
| TCTTCTTGGCTACTCGTAAG+AGG | 0.493331 | 6_3:-61654672 | Msa0956020:CDS |
| TAATACCTTTGAACGAGCAT+TGG | 0.494955 | 6_3:+61655853 | None:intergenic |
| GCTACTCGTAAGAGGAAGTC+TGG | 0.496029 | 6_3:-61654664 | Msa0956020:CDS |
| GTTGCTTTAGCAAGATATCC+AGG | 0.497813 | 6_3:+61655827 | None:intergenic |
| AAGACCATCATACGCCCAAT+TGG | 0.499185 | 6_3:-61655425 | Msa0956020:CDS |
| GGAAGCTTTAGAGAATCAAT+CGG | 0.509751 | 6_3:-61653656 | Msa0956020:CDS |
| GCATTAGCACCATCTTTGCT+AGG | 0.518356 | 6_3:+61655299 | None:intergenic |
| TTAGGTTGGACGGCTGGTCG+GGG | 0.518978 | 6_3:+61655674 | None:intergenic |
| GAATCAATTCTCTACTGCTA+TGG | 0.520159 | 6_3:-61653698 | Msa0956020:CDS |
| TTGACCAATTGGGCGTATGA+TGG | 0.526388 | 6_3:+61655421 | None:intergenic |
| GATTGAAATGTTTCGTCAGA+AGG | 0.528504 | 6_3:-61653897 | Msa0956020:CDS |
| GAGGTGGGCTCAACTGGCCG+TGG | 0.535224 | 6_3:+61655755 | None:intergenic |
| AAGAGTTCATCAGGATGGAT+AGG | 0.544009 | 6_3:+61654691 | None:intergenic |
| CTGACAGGAATATGTTTCAT+GGG | 0.544185 | 6_3:-61655082 | Msa0956020:intron |
| GTAAGAGGAAGTCTGGCGAT+TGG | 0.544893 | 6_3:-61654657 | Msa0956020:CDS |
| CGTTCAAAGGTATTACAACC+TGG | 0.548147 | 6_3:-61655845 | Msa0956020:CDS |
| TGGCACTGCCTTTCCTCAAG+AGG | 0.549569 | 6_3:+61656435 | None:intergenic |
| ATCATACGCCCAATTGGTCA+AGG | 0.549638 | 6_3:-61655419 | Msa0956020:CDS |
| TGTCCATACCACAGGTCGTA+AGG | 0.551241 | 6_3:-61654845 | Msa0956020:CDS |
| GTTTCAAACCATAGATCTTG+AGG | 0.552921 | 6_3:+61655218 | None:intergenic |
| AAACACACATACCGAGCAAG+AGG | 0.553474 | 6_3:-61655471 | Msa0956020:CDS |
| CTTCACAAAACAAGACTAGT+CGG | 0.559319 | 6_3:-61654888 | Msa0956020:CDS |
| AGTCGGGGTTCGGGCAAAGG+AGG | 0.559480 | 6_3:-61654871 | Msa0956020:CDS |
| CACCTAGAGATTGCCTCTTG+AGG | 0.561712 | 6_3:-61656448 | Msa0956020:CDS |
| TTCCTCAAGAGGCAATCTCT+AGG | 0.563066 | 6_3:+61656446 | None:intergenic |
| TTCCACCAATGCTCGTTCAA+AGG | 0.564669 | 6_3:-61655858 | Msa0956020:CDS |
| CTCACGAAACACCAAAGGGC+TGG | 0.567584 | 6_3:+61656415 | None:intergenic |
| TTAGAGAATCAATCGGGCGA+TGG | 0.571971 | 6_3:-61653649 | Msa0956020:CDS |
| GCTAGGTAGTTCGAGTACTC+CGG | 0.575459 | 6_3:-61656498 | Msa0956020:CDS |
| GAGCCTTACGACCTGTGGTA+TGG | 0.575889 | 6_3:+61654842 | None:intergenic |
| ATGTCGTCCTCCTGAAAATG+AGG | 0.579452 | 6_3:-61653921 | Msa0956020:CDS |
| CCAAGAAGAGTTCATCAGGA+TGG | 0.580522 | 6_3:+61654686 | None:intergenic |
| CCACGACGTGGCACTAGACA+TGG | 0.582481 | 6_3:-61654818 | Msa0956020:intron |
| GGAAGAATTCAGGAAGCGCA+TGG | 0.584480 | 6_3:-61653677 | Msa0956020:CDS |
| AATCCAAAAGACATCAATTG+TGG | 0.589575 | 6_3:-61655726 | Msa0956020:CDS |
| TAATGGTGATATGCAAGAGG+TGG | 0.590246 | 6_3:-61654065 | Msa0956020:CDS |
| TATAATAGCATCTTTCTTAG+GGG | 0.592529 | 6_3:+61655448 | None:intergenic |
| ATGGGAGAGGATGCATATGC+TGG | 0.593184 | 6_3:-61654952 | Msa0956020:CDS |
| GATTGGGTTGACAGTCGTGC+TGG | 0.597801 | 6_3:-61654640 | Msa0956020:CDS |
| TTATCTTTCAACATTAGACC+AGG | 0.600042 | 6_3:-61653965 | Msa0956020:CDS |
| ATTATGGGTAGATGTTGCTG+GGG | 0.600229 | 6_3:-61654023 | Msa0956020:CDS |
| GATATCTTGCTAAAGCAACC+AGG | 0.601805 | 6_3:-61655823 | Msa0956020:CDS |
| GGAGGAGCTGTCCATACCAC+AGG | 0.602462 | 6_3:-61654853 | Msa0956020:CDS |
| GAAGCTTTAGAGAATCAATC+GGG | 0.602628 | 6_3:-61653655 | Msa0956020:CDS |
| ACAGACTCACGAAACACCAA+AGG | 0.603475 | 6_3:+61656410 | None:intergenic |
| ACTGACAGTGTAAAATACTT+GGG | 0.608198 | 6_3:-61654717 | Msa0956020:intron |
| AAAATGACTAGACAATGTCA+TGG | 0.611773 | 6_3:-61655899 | Msa0956020:CDS |
| TTATGGGTAGATGTTGCTGG+GGG | 0.616713 | 6_3:-61654022 | Msa0956020:CDS |
| TTACAAAAGTAAGAAATAAG+GGG | 0.619851 | 6_3:-61654990 | Msa0956020:CDS |
| AATGGTGATATGCAAGAGGT+GGG | 0.621480 | 6_3:-61654064 | Msa0956020:CDS |
| AAAACCTAAATGGATGGGAG+AGG | 0.624446 | 6_3:-61654965 | Msa0956020:CDS |
| TGAGTCAGATGACTTACACC+TGG | 0.624603 | 6_3:+61653947 | None:intergenic |
| TACAAAAGTAAGAAATAAGG+GGG | 0.626187 | 6_3:-61654989 | Msa0956020:CDS |
| AGAGATTGCCTCTTGAGGAA+AGG | 0.626611 | 6_3:-61656443 | Msa0956020:CDS |
| CAGACTCACGAAACACCAAA+GGG | 0.628834 | 6_3:+61656411 | None:intergenic |
| TCACAAAACAAGACTAGTCG+GGG | 0.631259 | 6_3:-61654886 | Msa0956020:CDS |
| TGCATATGGAGATGGATGCT+AGG | 0.631295 | 6_3:-61656515 | None:intergenic |
| TTCTAATGGTGATATGCAAG+AGG | 0.631960 | 6_3:-61654068 | Msa0956020:CDS |
| TCATACGCCCAATTGGTCAA+GGG | 0.653662 | 6_3:-61655418 | Msa0956020:intron |
| AGGTAATTGTTATGGTACTG+GGG | 0.660624 | 6_3:-61653990 | Msa0956020:CDS |
| TGGTGCTAATGCAATGAGGA+TGG | 0.662918 | 6_3:-61655288 | Msa0956020:CDS |
| ATGGGAGACTCAATATGATG+CGG | 0.663539 | 6_3:-61655064 | Msa0956020:CDS |
| GTGGTGAGCCTTACGACCTG+TGG | 0.668031 | 6_3:+61654837 | None:intergenic |
| GGTGATATGCAAGAGGTGGG+CGG | 0.675105 | 6_3:-61654061 | Msa0956020:CDS |
| CACTCGTAAAATAAGCACGC+CGG | 0.687463 | 6_3:+61656479 | None:intergenic |
| CCATGTCTAGTGCCACGTCG+TGG | 0.693029 | 6_3:+61654818 | None:intergenic |
| TCGTAAGGCTCACCACGACG+TGG | 0.712195 | 6_3:-61654830 | Msa0956020:CDS |
| AAGATGGTGCTAATGCAATG+AGG | 0.735156 | 6_3:-61655292 | Msa0956020:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATGATCAAAATACATATA+TGG | - | chr6_3:61655733-61655752 | Msa0956020:CDS | 15.0% |
| !! | ATATGTGAACATATATAATT+TGG | - | chr6_3:61655843-61655862 | Msa0956020:CDS | 15.0% |
| !!! | TTGATATTTTTGTTTGTGTT+TGG | - | chr6_3:61653853-61653872 | Msa0956020:intron | 20.0% |
| !! | TTATAATAGCATCTTTCTTA+GGG | + | chr6_3:61654671-61654690 | None:intergenic | 20.0% |
| !! | TTTATAATAGCATCTTTCTT+AGG | + | chr6_3:61654672-61654691 | None:intergenic | 20.0% |
| !!! | AAAGAATAATGTTGCTTTAT+TGG | - | chr6_3:61654938-61654957 | Msa0956020:CDS | 20.0% |
| !! | CTTACAAAAGTAAGAAATAA+GGG | - | chr6_3:61655124-61655143 | Msa0956020:intron | 20.0% |
| !! | TTACAAAAGTAAGAAATAAG+GGG | - | chr6_3:61655125-61655144 | Msa0956020:intron | 20.0% |
| !! | AGATATTAAAGAAATTGGAA+TGG | + | chr6_3:61655330-61655349 | None:intergenic | 20.0% |
| !! | GAACTAGATATTAAAGAAAT+TGG | + | chr6_3:61655335-61655354 | None:intergenic | 20.0% |
| !!! | AGACATTACTATTTGTTTTA+TGG | - | chr6_3:61655371-61655390 | Msa0956020:intron | 20.0% |
| !! | ATATGTGAACATATATAATC+TGG | - | chr6_3:61655619-61655638 | Msa0956020:intron | 20.0% |
| !!! | AATAAGTTGTGTTTTTTTAC+AGG | - | chr6_3:61655978-61655997 | Msa0956020:intron | 20.0% |
| ! | CAATAAATCTTCATCAAAGT+CGG | - | chr6_3:61654008-61654027 | Msa0956020:CDS | 25.0% |
| ! | TATAATAGCATCTTTCTTAG+GGG | + | chr6_3:61654670-61654689 | None:intergenic | 25.0% |
| !!! | TCTATGGTTTGAAACATTTT+CGG | - | chr6_3:61654905-61654924 | Msa0956020:CDS | 25.0% |
| !!! | CTATTTTTATATTGTCTGAC+AGG | - | chr6_3:61655018-61655037 | Msa0956020:CDS | 25.0% |
| ! | GCTTACAAAAGTAAGAAATA+AGG | - | chr6_3:61655123-61655142 | Msa0956020:intron | 25.0% |
| ! | TACAAAAGTAAGAAATAAGG+GGG | - | chr6_3:61655126-61655145 | Msa0956020:intron | 25.0% |
| ! | AAGATTGATGAGAATTCTAA+TGG | - | chr6_3:61656033-61656052 | Msa0956020:intron | 25.0% |
| !! | TTTTTGTTTGTGTTTGGTTG+TGG | - | chr6_3:61653859-61653878 | Msa0956020:intron | 30.0% |
| !! | TTTTGTTTGTGTTTGGTTGT+GGG | - | chr6_3:61653860-61653879 | Msa0956020:intron | 30.0% |
| !! | TGTGAATTTTGGTACTGTAA+TGG | - | chr6_3:61653904-61653923 | Msa0956020:CDS | 30.0% |
| TATTTGTATTAACAGTGCAC+TGG | - | chr6_3:61654089-61654108 | Msa0956020:CDS | 30.0% | |
| AAAATGACTAGACAATGTCA+TGG | - | chr6_3:61654216-61654235 | Msa0956020:intron | 30.0% | |
| ! | ATTGATGTCTTTTGGATTGT+TGG | + | chr6_3:61654387-61654406 | None:intergenic | 30.0% |
| AATCCAAAAGACATCAATTG+TGG | - | chr6_3:61654389-61654408 | Msa0956020:intron | 30.0% | |
| TAAAATACCCTTGACCAATT+GGG | + | chr6_3:61654707-61654726 | None:intergenic | 30.0% | |
| ATAAAATACCCTTGACCAAT+TGG | + | chr6_3:61654708-61654727 | None:intergenic | 30.0% | |
| ACTGACAGTGTAAAATACTT+GGG | - | chr6_3:61655398-61655417 | Msa0956020:intron | 30.0% | |
| CACAAGCACATAATGAATTA+TGG | + | chr6_3:61655662-61655681 | None:intergenic | 30.0% | |
| ATGGATAAGTTATGTAAACC+TGG | - | chr6_3:61655752-61655771 | Msa0956020:CDS | 30.0% | |
| TCTCAAATTGCAAATATTCC+AGG | + | chr6_3:61655773-61655792 | None:intergenic | 30.0% | |
| TAACACATATCTCAAGATTG+TGG | + | chr6_3:61655819-61655838 | None:intergenic | 30.0% | |
| ! | CAGAAGCACATAATGAATTA+TGG | + | chr6_3:61655886-61655905 | None:intergenic | 30.0% |
| AGAGAAACGACTTCAATTAT+GGG | - | chr6_3:61656077-61656096 | Msa0956020:intron | 30.0% | |
| TTATCTTTCAACATTAGACC+AGG | - | chr6_3:61656150-61656169 | Msa0956020:intron | 30.0% | |
| ! | ATTTCAATCACCTCATTTTC+AGG | + | chr6_3:61656207-61656226 | None:intergenic | 30.0% |
| !!! | CTTATTTTACGAGTGGAGTT+GGG | - | chr6_3:61653644-61653663 | Msa0956020:CDS | 35.0% |
| !!! | AGTGTTTTCTGGGACTATTT+TGG | - | chr6_3:61653810-61653829 | Msa0956020:intron | 35.0% |
| CAACCATTACTTCATGCTTT+CGG | - | chr6_3:61654137-61654156 | Msa0956020:intron | 35.0% | |
| TAATACCTTTGAACGAGCAT+TGG | + | chr6_3:61654265-61654284 | None:intergenic | 35.0% | |
| !! | ATCTAGTTCTTTAGGTTGGA+CGG | + | chr6_3:61654454-61654473 | None:intergenic | 35.0% |
| !! | AGACATCTAGTTCTTTAGGT+TGG | + | chr6_3:61654458-61654477 | None:intergenic | 35.0% |
| !! | GGTTAGACATCTAGTTCTTT+AGG | + | chr6_3:61654462-61654481 | None:intergenic | 35.0% |
| AGATTTACACCTAGCAAAGA+TGG | - | chr6_3:61654807-61654826 | Msa0956020:intron | 35.0% | |
| AAAAGGTTCCTCAAGATCTA+TGG | - | chr6_3:61654889-61654908 | Msa0956020:CDS | 35.0% | |
| GTTTCAAACCATAGATCTTG+AGG | + | chr6_3:61654900-61654919 | None:intergenic | 35.0% | |
| !! | GGTTTGAAACATTTTCGGTA+AGG | - | chr6_3:61654910-61654929 | Msa0956020:CDS | 35.0% |
| ! | GCTTTATTGGTTGAAAACTG+TGG | - | chr6_3:61654951-61654970 | Msa0956020:CDS | 35.0% |
| TCTGACAGGAATATGTTTCA+TGG | - | chr6_3:61655032-61655051 | Msa0956020:CDS | 35.0% | |
| CTGACAGGAATATGTTTCAT+GGG | - | chr6_3:61655033-61655052 | Msa0956020:CDS | 35.0% | |
| ! | CTTTTGTAAGCATGTCAGTA+AGG | + | chr6_3:61655114-61655133 | None:intergenic | 35.0% |
| ATAAGGGGGAAAAACCTAAA+TGG | - | chr6_3:61655140-61655159 | Msa0956020:intron | 35.0% | |
| !! | ATGCTGGTCTTCTTGAATAT+TGG | - | chr6_3:61655179-61655198 | Msa0956020:intron | 35.0% |
| CTTCACAAAACAAGACTAGT+CGG | - | chr6_3:61655227-61655246 | Msa0956020:CDS | 35.0% | |
| ! | TTCACAAAACAAGACTAGTC+GGG | - | chr6_3:61655228-61655247 | Msa0956020:CDS | 35.0% |
| GACTGACAGTGTAAAATACT+TGG | - | chr6_3:61655397-61655416 | Msa0956020:intron | 35.0% | |
| CTCAAGATTGTGGACATATT+CGG | + | chr6_3:61655809-61655828 | None:intergenic | 35.0% | |
| TTCTAATGGTGATATGCAAG+AGG | - | chr6_3:61656047-61656066 | Msa0956020:intron | 35.0% | |
| GAGAGAAACGACTTCAATTA+TGG | - | chr6_3:61656076-61656095 | Msa0956020:intron | 35.0% | |
| AATTATGGGTAGATGTTGCT+GGG | - | chr6_3:61656091-61656110 | Msa0956020:intron | 35.0% | |
| TTGTCTCGAGGTAATTGTTA+TGG | - | chr6_3:61656117-61656136 | Msa0956020:intron | 35.0% | |
| GAGGTAATTGTTATGGTACT+GGG | - | chr6_3:61656124-61656143 | Msa0956020:intron | 35.0% | |
| AGGTAATTGTTATGGTACTG+GGG | - | chr6_3:61656125-61656144 | Msa0956020:intron | 35.0% | |
| GATTGAAATGTTTCGTCAGA+AGG | - | chr6_3:61656218-61656237 | Msa0956020:intron | 35.0% | |
| GAATCAATTCTCTACTGCTA+TGG | - | chr6_3:61656417-61656436 | Msa0956020:intron | 35.0% | |
| !! | GGAAGCTTTAGAGAATCAAT+CGG | - | chr6_3:61656459-61656478 | Msa0956020:CDS | 35.0% |
| !! | GAAGCTTTAGAGAATCAATC+GGG | - | chr6_3:61656460-61656479 | Msa0956020:CDS | 35.0% |
| !!! | GCTTATTTTACGAGTGGAGT+TGG | - | chr6_3:61653643-61653662 | Msa0956020:CDS | 40.0% |
| !!! | TTTTCTGGGACTATTTTGGC+AGG | - | chr6_3:61653814-61653833 | Msa0956020:intron | 40.0% |
| !!! | TTTCTGGGACTATTTTGGCA+GGG | - | chr6_3:61653815-61653834 | Msa0956020:intron | 40.0% |
| ! | TAAGCTGTGGGTGTGAATTT+TGG | - | chr6_3:61653893-61653912 | Msa0956020:CDS | 40.0% |
| !! | CAAAGTCGGTGTTTTCAGTA+TGG | - | chr6_3:61654022-61654041 | Msa0956020:CDS | 40.0% |
| ! | CGAAAGCATGAAGTAATGGT+TGG | + | chr6_3:61654139-61654158 | None:intergenic | 40.0% |
| ! | CAACCGAAAGCATGAAGTAA+TGG | + | chr6_3:61654143-61654162 | None:intergenic | 40.0% |
| !! | CGTTCAAAGGTATTACAACC+TGG | - | chr6_3:61654270-61654289 | Msa0956020:intron | 40.0% |
| ! | GTTGCTTTAGCAAGATATCC+AGG | + | chr6_3:61654291-61654310 | None:intergenic | 40.0% |
| GATATCTTGCTAAAGCAACC+AGG | - | chr6_3:61654292-61654311 | Msa0956020:intron | 40.0% | |
| !!! | GTGGCAACCCTAGTTTTTTT+CGG | + | chr6_3:61654344-61654363 | None:intergenic | 40.0% |
| GAAAAAAACTAGGGTTGCCA+CGG | - | chr6_3:61654343-61654362 | Msa0956020:intron | 40.0% | |
| !! | TTTTGGATTGTTGGTGAGGT+GGG | + | chr6_3:61654378-61654397 | None:intergenic | 40.0% |
| ! | TGTCTTTTGGATTGTTGGTG+AGG | + | chr6_3:61654382-61654401 | None:intergenic | 40.0% |
| ! | GGACCACAATTGATGTCTTT+TGG | + | chr6_3:61654395-61654414 | None:intergenic | 40.0% |
| ! | ATCTAGATCAGTAGGTTGGA+CGG | + | chr6_3:61654517-61654536 | None:intergenic | 40.0% |
| ! | AAGATGGTGCTAATGCAATG+AGG | - | chr6_3:61654823-61654842 | Msa0956020:CDS | 40.0% |
| ATGCAATGAGGATGGCTATT+AGG | - | chr6_3:61654835-61654854 | Msa0956020:CDS | 40.0% | |
| TGGCTATTAGGCGTCAATTT+CGG | - | chr6_3:61654847-61654866 | Msa0956020:CDS | 40.0% | |
| !!! | TGTTTTTTCGTGCTGGGAAA+AGG | - | chr6_3:61654872-61654891 | Msa0956020:CDS | 40.0% |
| ATGGGAGACTCAATATGATG+CGG | - | chr6_3:61655051-61655070 | Msa0956020:CDS | 40.0% | |
| CTCAATATGATGCGGAAATC+AGG | - | chr6_3:61655059-61655078 | Msa0956020:CDS | 40.0% | |
| GGGGAAAAACCTAAATGGAT+GGG | - | chr6_3:61655145-61655164 | Msa0956020:intron | 40.0% | |
| AAAACCTAAATGGATGGGAG+AGG | - | chr6_3:61655150-61655169 | Msa0956020:intron | 40.0% | |
| ! | TCACAAAACAAGACTAGTCG+GGG | - | chr6_3:61655229-61655248 | Msa0956020:CDS | 40.0% |
| AAGAGTTCATCAGGATGGAT+AGG | + | chr6_3:61655427-61655446 | None:intergenic | 40.0% | |
| CAATCTTCGTTAGTTGAGTC+AGG | + | chr6_3:61656020-61656039 | None:intergenic | 40.0% | |
| TAATGGTGATATGCAAGAGG+TGG | - | chr6_3:61656050-61656069 | Msa0956020:intron | 40.0% | |
| AATGGTGATATGCAAGAGGT+GGG | - | chr6_3:61656051-61656070 | Msa0956020:intron | 40.0% | |
| CAATTATGGGTAGATGTTGC+TGG | - | chr6_3:61656090-61656109 | Msa0956020:intron | 40.0% | |
| ATTATGGGTAGATGTTGCTG+GGG | - | chr6_3:61656092-61656111 | Msa0956020:intron | 40.0% | |
| CGAGGTAATTGTTATGGTAC+TGG | - | chr6_3:61656123-61656142 | Msa0956020:intron | 40.0% | |
| !! | TCAATCACCTCATTTTCAGG+AGG | + | chr6_3:61656204-61656223 | None:intergenic | 40.0% |
| CTACTGCTATGGAAGAATTC+AGG | - | chr6_3:61656428-61656447 | Msa0956020:CDS | 40.0% | |
| CACTCGTAAAATAAGCACGC+CGG | + | chr6_3:61653639-61653658 | None:intergenic | 45.0% | |
| TTCCTCAAGAGGCAATCTCT+AGG | + | chr6_3:61653672-61653691 | None:intergenic | 45.0% | |
| AGAGATTGCCTCTTGAGGAA+AGG | - | chr6_3:61653672-61653691 | Msa0956020:CDS | 45.0% | |
| CAGACTCACGAAACACCAAA+GGG | + | chr6_3:61653707-61653726 | None:intergenic | 45.0% | |
| ACAGACTCACGAAACACCAA+AGG | + | chr6_3:61653708-61653727 | None:intergenic | 45.0% | |
| ! | TTGGTGTTTCGTGAGTCTGT+CGG | - | chr6_3:61653708-61653727 | Msa0956020:CDS | 45.0% |
| !! | TTTCGTGAGTCTGTCGGTTT+GGG | - | chr6_3:61653714-61653733 | Msa0956020:CDS | 45.0% |
| !!! | TTCTGGGACTATTTTGGCAG+GGG | - | chr6_3:61653816-61653835 | Msa0956020:intron | 45.0% |
| TGTTTGTGTTTGGTTGTGGG+AGG | - | chr6_3:61653863-61653882 | Msa0956020:intron | 45.0% | |
| TATGCATACATGTCGTGCAC+TGG | + | chr6_3:61654050-61654069 | None:intergenic | 45.0% | |
| TTCCACCAATGCTCGTTCAA+AGG | - | chr6_3:61654257-61654276 | Msa0956020:intron | 45.0% | |
| !! | TACCTTTGAACGAGCATTGG+TGG | + | chr6_3:61654262-61654281 | None:intergenic | 45.0% |
| GTTGGCTACAACAAGTTTCC+TGG | + | chr6_3:61654313-61654332 | None:intergenic | 45.0% | |
| AGACGCGCCGAAAAAAACTA+GGG | - | chr6_3:61654334-61654353 | Msa0956020:intron | 45.0% | |
| !! | CTTTTGGATTGTTGGTGAGG+TGG | + | chr6_3:61654379-61654398 | None:intergenic | 45.0% |
| GGACATCTAGATCAGTAGGT+TGG | + | chr6_3:61654521-61654540 | None:intergenic | 45.0% | |
| GGTTGGACATCTAGATCAGT+AGG | + | chr6_3:61654525-61654544 | None:intergenic | 45.0% | |
| CAGATGATCATCCTCCTCAA+GGG | + | chr6_3:61654607-61654626 | None:intergenic | 45.0% | |
| AAACACACATACCGAGCAAG+AGG | - | chr6_3:61654644-61654663 | Msa0956020:CDS | 45.0% | |
| AAGACCATCATACGCCCAAT+TGG | - | chr6_3:61654690-61654709 | Msa0956020:CDS | 45.0% | |
| TTGACCAATTGGGCGTATGA+TGG | + | chr6_3:61654697-61654716 | None:intergenic | 45.0% | |
| ATCATACGCCCAATTGGTCA+AGG | - | chr6_3:61654696-61654715 | Msa0956020:CDS | 45.0% | |
| TCATACGCCCAATTGGTCAA+GGG | - | chr6_3:61654697-61654716 | Msa0956020:CDS | 45.0% | |
| GCATTAGCACCATCTTTGCT+AGG | + | chr6_3:61654819-61654838 | None:intergenic | 45.0% | |
| ! | TGGTGCTAATGCAATGAGGA+TGG | - | chr6_3:61654827-61654846 | Msa0956020:CDS | 45.0% |
| GGCTATTAGGCGTCAATTTC+GGG | - | chr6_3:61654848-61654867 | Msa0956020:CDS | 45.0% | |
| !!! | TTCGGGATGTTTTTTCGTGC+TGG | - | chr6_3:61654865-61654884 | Msa0956020:CDS | 45.0% |
| !!! | TCGGGATGTTTTTTCGTGCT+GGG | - | chr6_3:61654866-61654885 | Msa0956020:CDS | 45.0% |
| ! | CATATTTCTGCAGCAGCCAA+AGG | + | chr6_3:61654986-61655005 | None:intergenic | 45.0% |
| GGGGGAAAAACCTAAATGGA+TGG | - | chr6_3:61655144-61655163 | Msa0956020:intron | 45.0% | |
| ! | AAACAAGACTAGTCGGGGTT+CGG | - | chr6_3:61655234-61655253 | Msa0956020:CDS | 45.0% |
| CCAAGAAGAGTTCATCAGGA+TGG | + | chr6_3:61655432-61655451 | None:intergenic | 45.0% | |
| CCATCCTGATGAACTCTTCT+TGG | - | chr6_3:61655429-61655448 | Msa0956020:CDS | 45.0% | |
| GTAGCCAAGAAGAGTTCATC+AGG | + | chr6_3:61655436-61655455 | None:intergenic | 45.0% | |
| TCTTCTTGGCTACTCGTAAG+AGG | - | chr6_3:61655443-61655462 | Msa0956020:CDS | 45.0% | |
| TAAGAGGAAGTCTGGCGATT+GGG | - | chr6_3:61655459-61655478 | Msa0956020:CDS | 45.0% | |
| TTATGGGTAGATGTTGCTGG+GGG | - | chr6_3:61656093-61656112 | Msa0956020:intron | 45.0% | |
| TGAGTCAGATGACTTACACC+TGG | + | chr6_3:61656171-61656190 | None:intergenic | 45.0% | |
| ATGTCGTCCTCCTGAAAATG+AGG | - | chr6_3:61656194-61656213 | Msa0956020:intron | 45.0% | |
| TTAGAGAATCAATCGGGCGA+TGG | - | chr6_3:61656466-61656485 | Msa0956020:CDS | 45.0% | |
| !! | TTTAATTATAATTTCAAAAA+CGG | + | chr6_3:61653988-61654007 | None:intergenic | 5.0% |
| GCTAGGTAGTTCGAGTACTC+CGG | - | chr6_3:61653617-61653636 | Msa0956020:CDS | 50.0% | |
| !!! | CGGCGTGCTTATTTTACGAG+TGG | - | chr6_3:61653637-61653656 | Msa0956020:CDS | 50.0% |
| CACCTAGAGATTGCCTCTTG+AGG | - | chr6_3:61653667-61653686 | Msa0956020:CDS | 50.0% | |
| ! | GTTTCGTGAGTCTGTCGGTT+TGG | - | chr6_3:61653713-61653732 | Msa0956020:CDS | 50.0% |
| !! | TTCGTGAGTCTGTCGGTTTG+GGG | - | chr6_3:61653715-61653734 | Msa0956020:CDS | 50.0% |
| ! | CCTGCTGTGCAGTGTTTTCT+GGG | - | chr6_3:61653800-61653819 | Msa0956020:intron | 50.0% |
| TTGTGTTTGGTTGTGGGAGG+TGG | - | chr6_3:61653866-61653885 | Msa0956020:intron | 50.0% | |
| TGTGTTTGGTTGTGGGAGGT+GGG | - | chr6_3:61653867-61653886 | Msa0956020:intron | 50.0% | |
| !!! | TTTTTTTCGGCGCGTCTCGT+TGG | + | chr6_3:61654331-61654350 | None:intergenic | 50.0% |
| GAGACGCGCCGAAAAAAACT+AGG | - | chr6_3:61654333-61654352 | Msa0956020:intron | 50.0% | |
| !! | AGTTCTTTAGGTTGGACGGC+TGG | + | chr6_3:61654450-61654469 | None:intergenic | 50.0% |
| ACTTGAGAAGGTAGGACCAC+TGG | + | chr6_3:61654561-61654580 | None:intergenic | 50.0% | |
| GTGCAGTCACTTGAGAAGGT+AGG | + | chr6_3:61654569-61654588 | None:intergenic | 50.0% | |
| ACCTTCTCAAGTGACTGCAC+CGG | - | chr6_3:61654569-61654588 | Msa0956020:intron | 50.0% | |
| TCAAGGGAAGGTAGTGATGC+CGG | + | chr6_3:61654591-61654610 | None:intergenic | 50.0% | |
| ATCACTACCTTCCCTTGAGG+AGG | - | chr6_3:61654593-61654612 | Msa0956020:intron | 50.0% | |
| TGATCATCCTCCTCAAGGGA+AGG | + | chr6_3:61654603-61654622 | None:intergenic | 50.0% | |
| GCAGATGATCATCCTCCTCA+AGG | + | chr6_3:61654608-61654627 | None:intergenic | 50.0% | |
| GAGGAGGATGATCATCTGCA+AGG | - | chr6_3:61654609-61654628 | Msa0956020:intron | 50.0% | |
| TGATCATCTGCAAGGTGTGC+AGG | - | chr6_3:61654617-61654636 | Msa0956020:intron | 50.0% | |
| GATCATCTGCAAGGTGTGCA+GGG | - | chr6_3:61654618-61654637 | Msa0956020:intron | 50.0% | |
| TTTCTTAGGGGCCTCTTGCT+CGG | + | chr6_3:61654658-61654677 | None:intergenic | 50.0% | |
| ! | ACTGTGGTGCCTTGTTCCTT+TGG | - | chr6_3:61654967-61654986 | Msa0956020:CDS | 50.0% |
| ! | GCATGTCAGTAAGGCGCTTT+GGG | + | chr6_3:61655105-61655124 | None:intergenic | 50.0% |
| ! | AGCATGTCAGTAAGGCGCTT+TGG | + | chr6_3:61655106-61655125 | None:intergenic | 50.0% |
| GCATCCTCTCCCATCCATTT+AGG | + | chr6_3:61655157-61655176 | None:intergenic | 50.0% | |
| ATGGGAGAGGATGCATATGC+TGG | - | chr6_3:61655163-61655182 | Msa0956020:intron | 50.0% | |
| ! | AACAAGACTAGTCGGGGTTC+GGG | - | chr6_3:61655235-61655254 | Msa0956020:CDS | 50.0% |
| TGTCCATACCACAGGTCGTA+AGG | - | chr6_3:61655270-61655289 | Msa0956020:CDS | 50.0% | |
| GCTACTCGTAAGAGGAAGTC+TGG | - | chr6_3:61655451-61655470 | Msa0956020:CDS | 50.0% | |
| GTAAGAGGAAGTCTGGCGAT+TGG | - | chr6_3:61655458-61655477 | Msa0956020:CDS | 50.0% | |
| ! | GGAAGAATTCAGGAAGCGCA+TGG | - | chr6_3:61656438-61656457 | Msa0956020:CDS | 50.0% |
| TGGCACTGCCTTTCCTCAAG+AGG | + | chr6_3:61653683-61653702 | None:intergenic | 55.0% | |
| CTCACGAAACACCAAAGGGC+TGG | + | chr6_3:61653703-61653722 | None:intergenic | 55.0% | |
| !! | TCGTGAGTCTGTCGGTTTGG+GGG | - | chr6_3:61653716-61653735 | Msa0956020:CDS | 55.0% |
| GCTCGGTTATGACTGCTGTC+AGG | - | chr6_3:61653747-61653766 | Msa0956020:intron | 55.0% | |
| ! | GCCTGCTGTGCAGTGTTTTC+TGG | - | chr6_3:61653799-61653818 | Msa0956020:intron | 55.0% |
| CCCAGAAAACACTGCACAGC+AGG | + | chr6_3:61653803-61653822 | None:intergenic | 55.0% | |
| GTGTTTGGTTGTGGGAGGTG+GGG | - | chr6_3:61653868-61653887 | Msa0956020:intron | 55.0% | |
| TGTTTGGTTGTGGGAGGTGG+GGG | - | chr6_3:61653869-61653888 | Msa0956020:intron | 55.0% | |
| !! | TTTAGGTTGGACGGCTGGTC+GGG | + | chr6_3:61654445-61654464 | None:intergenic | 55.0% |
| !! | CTTTAGGTTGGACGGCTGGT+CGG | + | chr6_3:61654446-61654465 | None:intergenic | 55.0% |
| ! | AGATCAGTAGGTTGGACGGC+TGG | + | chr6_3:61654513-61654532 | None:intergenic | 55.0% |
| !! | GTAGGACCACTGGTGTTGGT+GGG | + | chr6_3:61654551-61654570 | None:intergenic | 55.0% |
| GAAGGTAGGACCACTGGTGT+TGG | + | chr6_3:61654555-61654574 | None:intergenic | 55.0% | |
| GGCATCACTACCTTCCCTTG+AGG | - | chr6_3:61654590-61654609 | Msa0956020:intron | 55.0% | |
| CTGCAGCAGCCAAAGGAACA+AGG | + | chr6_3:61654979-61654998 | None:intergenic | 55.0% | |
| GAGCCTTACGACCTGTGGTA+TGG | + | chr6_3:61655276-61655295 | None:intergenic | 55.0% | |
| !! | GATTGGGTTGACAGTCGTGC+TGG | - | chr6_3:61655475-61655494 | Msa0956020:CDS | 55.0% |
| GGTGATATGCAAGAGGTGGG+CGG | - | chr6_3:61656054-61656073 | Msa0956020:intron | 55.0% | |
| GAAAGGCAGTGCCAGCCCTT+TGG | - | chr6_3:61653689-61653708 | Msa0956020:CDS | 60.0% | |
| !! | CGTGAGTCTGTCGGTTTGGG+GGG | - | chr6_3:61653717-61653736 | Msa0956020:CDS | 60.0% |
| ! | GTTGGTGAGGTGGGCTCAAC+TGG | + | chr6_3:61654369-61654388 | None:intergenic | 60.0% |
| !! | TTAGGTTGGACGGCTGGTCG+GGG | + | chr6_3:61654444-61654463 | None:intergenic | 60.0% |
| AGGGAGGTTGGATGGCTGGT+CGG | + | chr6_3:61654488-61654507 | None:intergenic | 60.0% | |
| ! | GTAGGTTGGACGGCTGGTCA+GGG | + | chr6_3:61654507-61654526 | None:intergenic | 60.0% |
| ! | AGTAGGTTGGACGGCTGGTC+AGG | + | chr6_3:61654508-61654527 | None:intergenic | 60.0% |
| !! | CTGGTGTTGGTGGGTCAGGT+TGG | + | chr6_3:61654542-61654561 | None:intergenic | 60.0% |
| ACCTGACCCACCAACACCAG+TGG | - | chr6_3:61654542-61654561 | Msa0956020:intron | 60.0% | |
| !! | ACCACTGGTGTTGGTGGGTC+AGG | + | chr6_3:61654546-61654565 | None:intergenic | 60.0% |
| ! | GGTAGGACCACTGGTGTTGG+TGG | + | chr6_3:61654552-61654571 | None:intergenic | 60.0% |
| GCCGGTGCAGTCACTTGAGA+AGG | + | chr6_3:61654573-61654592 | None:intergenic | 60.0% | |
| ACTAGTCGGGGTTCGGGCAA+AGG | - | chr6_3:61655241-61655260 | Msa0956020:CDS | 60.0% | |
| GGAGGAGCTGTCCATACCAC+AGG | - | chr6_3:61655262-61655281 | Msa0956020:CDS | 60.0% | |
| GTGGTGAGCCTTACGACCTG+TGG | + | chr6_3:61655281-61655300 | None:intergenic | 60.0% | |
| TCGTAAGGCTCACCACGACG+TGG | - | chr6_3:61655285-61655304 | Msa0956020:CDS | 60.0% | |
| CCATGTCTAGTGCCACGTCG+TGG | + | chr6_3:61655300-61655319 | None:intergenic | 60.0% | |
| CCACGACGTGGCACTAGACA+TGG | - | chr6_3:61655297-61655316 | Msa0956020:CDS | 60.0% | |
| GTTGCTGGGGGTTTGTCTCG+AGG | - | chr6_3:61656105-61656124 | Msa0956020:intron | 60.0% | |
| !! | TGTCGGTTTGGGGGGTCTGC+TGG | - | chr6_3:61653725-61653744 | Msa0956020:CDS | 65.0% |
| ! | GTTTGGGGGGTCTGCTGGCT+CGG | - | chr6_3:61653730-61653749 | Msa0956020:CDS | 65.0% |
| GGAGGTGGGGGCTAAGCTGT+GGG | - | chr6_3:61653881-61653900 | Msa0956020:intron | 65.0% | |
| ! | GGGAAGTGGGATGGCTGGTC+GGG | + | chr6_3:61654424-61654443 | None:intergenic | 65.0% |
| GGGGAAGTGGGATGGCTGGT+CGG | + | chr6_3:61654425-61654444 | None:intergenic | 65.0% | |
| ! | GGAGGTTGGATGGCTGGTCG+GGG | + | chr6_3:61654486-61654505 | None:intergenic | 65.0% |
| ! | GGGAGGTTGGATGGCTGGTC+GGG | + | chr6_3:61654487-61654506 | None:intergenic | 65.0% |
| GGTCAGGGAGGTTGGATGGC+TGG | + | chr6_3:61654492-61654511 | None:intergenic | 65.0% | |
| ! | GGCTGGTCAGGGAGGTTGGA+TGG | + | chr6_3:61654496-61654515 | None:intergenic | 65.0% |
| AGTCGGGGTTCGGGCAAAGG+AGG | - | chr6_3:61655244-61655263 | Msa0956020:CDS | 65.0% | |
| GGGAGGTGGGGGCTAAGCTG+TGG | - | chr6_3:61653880-61653899 | Msa0956020:intron | 70.0% | |
| ! | GAGGTGGGCTCAACTGGCCG+TGG | + | chr6_3:61654363-61654382 | None:intergenic | 70.0% |
| ! | GGATGGCTGGTCGGGCAGGT+TGG | + | chr6_3:61654416-61654435 | None:intergenic | 70.0% |
| ! | AGTGGGATGGCTGGTCGGGC+AGG | + | chr6_3:61654420-61654439 | None:intergenic | 70.0% |
| GGTCGGGGAAGTGGGATGGC+TGG | + | chr6_3:61654429-61654448 | None:intergenic | 70.0% | |
| ! | GGCTGGTCGGGGAAGTGGGA+TGG | + | chr6_3:61654433-61654452 | None:intergenic | 70.0% |
| ! | GGACGGCTGGTCGGGGAAGT+GGG | + | chr6_3:61654437-61654456 | None:intergenic | 70.0% |
| ! | TGGACGGCTGGTCGGGGAAG+TGG | + | chr6_3:61654438-61654457 | None:intergenic | 70.0% |
| ! | GGTTGGATGGCTGGTCGGGG+AGG | + | chr6_3:61654483-61654502 | None:intergenic | 70.0% |
| ! | GGACGGCTGGTCAGGGAGGT+TGG | + | chr6_3:61654500-61654519 | None:intergenic | 70.0% |
| ! | GGTTGGACGGCTGGTCAGGG+AGG | + | chr6_3:61654504-61654523 | None:intergenic | 70.0% |
| GGCTGCAGCAGCACGTGCTG+AGG | - | chr6_3:61656239-61656258 | Msa0956020:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_3 | gene | 61653615 | 61656522 | 61653615 | ID=Msa0956020;Name=Msa0956020 |
| chr6_3 | mRNA | 61653615 | 61656522 | 61653615 | ID=Msa0956020-mRNA-1;Parent=Msa0956020;Name=Msa0956020-mRNA-1;_AED=0.24;_eAED=0.33;_QI=0|0.5|0.33|0.77|1|1|9|0|448 |
| chr6_3 | exon | 61656420 | 61656522 | 61656420 | ID=Msa0956020-mRNA-1:exon:11999;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61656291 | 61656325 | 61656291 | ID=Msa0956020-mRNA-1:exon:11998;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61655685 | 61655921 | 61655685 | ID=Msa0956020-mRNA-1:exon:11997;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61655419 | 61655498 | 61655419 | ID=Msa0956020-mRNA-1:exon:11996;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61655211 | 61655328 | 61655211 | ID=Msa0956020-mRNA-1:exon:11995;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61654819 | 61655097 | 61654819 | ID=Msa0956020-mRNA-1:exon:11994;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61654630 | 61654731 | 61654630 | ID=Msa0956020-mRNA-1:exon:11993;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61653885 | 61654137 | 61653885 | ID=Msa0956020-mRNA-1:exon:11992;Parent=Msa0956020-mRNA-1 |
| chr6_3 | exon | 61653615 | 61653754 | 61653615 | ID=Msa0956020-mRNA-1:exon:11991;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61656420 | 61656522 | 61656420 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61656291 | 61656325 | 61656291 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61655685 | 61655921 | 61655685 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61655419 | 61655498 | 61655419 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61655211 | 61655328 | 61655211 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61654819 | 61655097 | 61654819 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61654630 | 61654731 | 61654630 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61653885 | 61654137 | 61653885 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| chr6_3 | CDS | 61653615 | 61653754 | 61653615 | ID=Msa0956020-mRNA-1:cds;Parent=Msa0956020-mRNA-1 |
| Gene Sequence |
| Protein sequence |
