Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109230 | GAU49407.1 | 43.112 | 392 | 194 | 8 | 110 | 484 | 9 | 388 | 1.78e-83 | 281 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109230 | A0A2Z6PS77 | 43.112 | 392 | 194 | 8 | 110 | 484 | 9 | 388 | 8.50e-84 | 281 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0259870 | Msa1109230 | 0.906688 | 1.135761e-80 | -8.615850e-47 |
| Msa1109230 | Msa1248720 | 0.910097 | 2.741987e-82 | -8.615850e-47 |
| Msa0887810 | Msa1109230 | 0.878916 | 1.906580e-69 | -8.615850e-47 |
| Msa0917830 | Msa1109230 | 0.917898 | 3.027960e-86 | -8.615850e-47 |
| Msa0956020 | Msa1109230 | 0.935515 | 7.509907e-97 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1109230 | MtrunA17_Chr4g0039731 | 43.583 | 374 | 165 | 8 | 152 | 486 | 161 | 527 | 2.86e-74 | 249 |
| Msa1109230 | MtrunA17_Chr3g0086081 | 32.189 | 233 | 132 | 4 | 172 | 389 | 4 | 225 | 6.10e-28 | 114 |
| Msa1109230 | MtrunA17_Chr8g0345501 | 25.902 | 305 | 197 | 9 | 161 | 438 | 413 | 715 | 1.10e-22 | 101 |
| Msa1109230 | MtrunA17_Chr4g0010341 | 35.664 | 143 | 81 | 2 | 153 | 284 | 181 | 323 | 3.01e-22 | 99.4 |
| Msa1109230 | MtrunA17_Chr4g0025081 | 30.315 | 254 | 150 | 10 | 159 | 387 | 231 | 482 | 3.01e-20 | 93.6 |
| Msa1109230 | MtrunA17_Chr1g0168171 | 57.692 | 78 | 29 | 2 | 222 | 295 | 1 | 78 | 3.85e-20 | 85.1 |
| Msa1109230 | MtrunA17_Chr1g0176161 | 26.911 | 327 | 209 | 12 | 159 | 457 | 158 | 482 | 1.51e-19 | 91.7 |
| Msa1109230 | MtrunA17_Chr1g0179631 | 22.923 | 349 | 232 | 10 | 138 | 455 | 492 | 834 | 1.91e-11 | 66.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 161 sgRNAs with CRISPR-Local
Find 372 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTATAATAGCATCTTTCTT+AGG | 0.145906 | 7_3:-52713575 | None:intergenic |
| GGCTATTAGGCGTCAATTTC+GGG | 0.176665 | 7_3:+52713754 | Msa1109230:CDS |
| GGACCACAGTTGATGTCTTT+TGG | 0.233233 | 7_3:-52713298 | None:intergenic |
| ACACAATTGTGAAGTTCTTA+TGG | 0.250119 | 7_3:+52715416 | Msa1109230:three_prime_UTR |
| GAGAGAAACGACTTCAATTA+TGG | 0.254171 | 7_3:+52714982 | Msa1109230:CDS |
| GGTTGGACATCTAGTTCTTT+AGG | 0.256896 | 7_3:-52713365 | None:intergenic |
| TGGACGGCTGGTCGGGGAAG+TGG | 0.260132 | 7_3:-52713341 | None:intergenic |
| TGGCTATTAGGCGTCAATTT+CGG | 0.262175 | 7_3:+52713753 | Msa1109230:CDS |
| ATGCTGGTCTTCTTGAATAT+TGG | 0.281800 | 7_3:+52714085 | Msa1109230:CDS |
| ATTGGTGACGTGTTATGTTT+TGG | 0.295242 | 7_3:+52715463 | Msa1109230:three_prime_UTR |
| ATAACCTGTGTCACTAGTTT+TGG | 0.298958 | 7_3:-52715558 | None:intergenic |
| CTCAATATGATGCGGAAATC+AGG | 0.302840 | 7_3:+52713965 | Msa1109230:CDS |
| CCATCCTGATGAACTCTTCT+TGG | 0.306942 | 7_3:+52714335 | Msa1109230:CDS |
| TTTAGGTTGGACGGCTGGTC+GGG | 0.310466 | 7_3:-52713348 | None:intergenic |
| GCATCCTCTCCCATCCATTT+AGG | 0.314255 | 7_3:-52714060 | None:intergenic |
| CTTCACAAAACAAGACTAAT+CGG | 0.320914 | 7_3:+52714133 | Msa1109230:CDS |
| CGAGGTAATTGTTATGGTAC+TGG | 0.324310 | 7_3:+52715029 | Msa1109230:CDS |
| AGTAGGTTGGACGGCTGGTC+GGG | 0.331759 | 7_3:-52713411 | None:intergenic |
| GATCAGCTTCAGCAGCTCTT+TGG | 0.342233 | 7_3:-52715181 | None:intergenic |
| ACCACTGGTGCTGGTGGGTC+AGG | 0.342578 | 7_3:-52713449 | None:intergenic |
| ATAAAATACCCTTGACCAAT+TGG | 0.342640 | 7_3:-52713611 | None:intergenic |
| TTTAATTTCTACTAATTGTA+TGG | 0.351738 | 7_3:+52715499 | Msa1109230:three_prime_UTR |
| AAAAGGTTCCTCAAGATCTA+TGG | 0.354768 | 7_3:+52713795 | Msa1109230:CDS |
| CTACTGCTATGGAAGAATTC+AGG | 0.367453 | 7_3:+52715234 | Msa1109230:CDS |
| ATGCAATGAGGATGGCTATT+AGG | 0.367943 | 7_3:+52713741 | Msa1109230:CDS |
| GTTGGTGAGGTGGGCTCAAC+TGG | 0.370950 | 7_3:-52713272 | None:intergenic |
| TTATAATAGCATCTTTCTTA+GGG | 0.373281 | 7_3:-52713574 | None:intergenic |
| GTTGGCTACAACAAGTTTCC+TGG | 0.374689 | 7_3:-52713216 | None:intergenic |
| GCATGTCAGTAAGGCGCTTT+GGG | 0.375371 | 7_3:-52714008 | None:intergenic |
| TTGTCTCGAGGTAATTGTTA+TGG | 0.375766 | 7_3:+52715023 | Msa1109230:CDS |
| GGTCGGGGAGGTTGGATGGC+TGG | 0.377425 | 7_3:-52713395 | None:intergenic |
| CAATTATGGGTAGATGTTGC+TGG | 0.379900 | 7_3:+52714996 | Msa1109230:CDS |
| GGGAAGTGGGATGGCTGGTC+GGG | 0.380978 | 7_3:-52713327 | None:intergenic |
| GGTTGGATGGCTGGTCGGGC+AGG | 0.388938 | 7_3:-52713386 | None:intergenic |
| GGGAGGTTGGATGGCTGGTC+GGG | 0.392962 | 7_3:-52713390 | None:intergenic |
| AGCATGTCAGTAAGGCGCTT+TGG | 0.396055 | 7_3:-52714009 | None:intergenic |
| GGACGGCTGGTCGGGGAGGT+TGG | 0.399368 | 7_3:-52713403 | None:intergenic |
| AACAAGACTAATCGGGGTTC+GGG | 0.400300 | 7_3:+52714141 | Msa1109230:CDS |
| AATTATGGGTAGATGTTGCT+GGG | 0.404667 | 7_3:+52714997 | Msa1109230:CDS |
| TCACCATGTTCTCTTTCAAT+TGG | 0.408880 | 7_3:+52715445 | Msa1109230:three_prime_UTR |
| TAGTGACACAGGTTATGTTT+TGG | 0.410283 | 7_3:+52715565 | Msa1109230:three_prime_UTR |
| GGTCGGGGAAGTGGGATGGC+TGG | 0.414065 | 7_3:-52713332 | None:intergenic |
| AGTGGGATGGCTGGTCGGGC+AGG | 0.414174 | 7_3:-52713323 | None:intergenic |
| CTAAAACACCAACAAACATT+AGG | 0.423848 | 7_3:-52715378 | None:intergenic |
| GACTGACAGTGTAAAATACT+TGG | 0.426930 | 7_3:+52714303 | Msa1109230:intron |
| TGATCATCTGCAAGGTGTGC+AGG | 0.431034 | 7_3:+52713523 | Msa1109230:CDS |
| TCTGACAGGAATATGTTTCA+TGG | 0.431668 | 7_3:+52713938 | Msa1109230:intron |
| CAATCTTCGTTAGTTGAGTC+AGG | 0.432364 | 7_3:-52714923 | None:intergenic |
| TTCACAAAACAAGACTAATC+GGG | 0.432488 | 7_3:+52714134 | Msa1109230:CDS |
| AAACAAGACTAATCGGGGTT+CGG | 0.436178 | 7_3:+52714140 | Msa1109230:CDS |
| CTTTAGGTTGGACGGCTGGT+CGG | 0.440694 | 7_3:-52713349 | None:intergenic |
| GGACGGCTGGTCGGGGAAGT+GGG | 0.440695 | 7_3:-52713340 | None:intergenic |
| GGGGAGGTTGGATGGCTGGT+CGG | 0.446752 | 7_3:-52713391 | None:intergenic |
| GGGGAAGTGGGATGGCTGGT+CGG | 0.448275 | 7_3:-52713328 | None:intergenic |
| AAGATTGATGAGAATTCTAA+TGG | 0.450583 | 7_3:+52714939 | Msa1109230:CDS |
| GGATGGCTGGTCGGGCAGGT+TGG | 0.452958 | 7_3:-52713319 | None:intergenic |
| TTTCTTAGGGGCCTCTTGCT+CGG | 0.456169 | 7_3:-52713561 | None:intergenic |
| GGCTGCAGCAGCACGTGCTG+AGG | 0.459336 | 7_3:+52715145 | Msa1109230:CDS |
| GGATGGCTGGTCGGGCAGGT+TGG | 0.462997 | 7_3:-52713382 | None:intergenic |
| ACTAATCGGGGTTCGGGCAA+AGG | 0.464856 | 7_3:+52714147 | Msa1109230:CDS |
| GGCTGGTCGGGGAGGTTGGA+TGG | 0.466137 | 7_3:-52713399 | None:intergenic |
| TAAGAGGAAGTCTGGCGATT+GGG | 0.469252 | 7_3:+52714365 | Msa1109230:CDS |
| AGAGAAACGACTTCAATTAT+GGG | 0.470876 | 7_3:+52714983 | Msa1109230:CDS |
| GGCTGGTCGGGGAAGTGGGA+TGG | 0.472110 | 7_3:-52713336 | None:intergenic |
| GTAGCCAAGAAGAGTTCATC+AGG | 0.473619 | 7_3:-52714339 | None:intergenic |
| AGTTCTTTAGGTTGGACGGC+TGG | 0.475146 | 7_3:-52713353 | None:intergenic |
| GGTGATTGAAATGTTTCGTC+AGG | 0.476769 | 7_3:+52715121 | Msa1109230:CDS |
| ATCTAGTTCTTTAGGTTGGA+CGG | 0.477088 | 7_3:-52713357 | None:intergenic |
| TACCTTTGAACGAGCATTGG+TGG | 0.478671 | 7_3:-52713165 | None:intergenic |
| TAAAATACCCTTGACCAATT+GGG | 0.480390 | 7_3:-52713610 | None:intergenic |
| CTGGTGCTGGTGGGTCAGGT+TGG | 0.482169 | 7_3:-52713445 | None:intergenic |
| AGATTTACACCTAGCAAAGA+TGG | 0.482324 | 7_3:+52713713 | Msa1109230:intron |
| GAGGTAATTGTTATGGTACT+GGG | 0.483970 | 7_3:+52715030 | Msa1109230:CDS |
| CAGTAGGTTGGACGGCTGGT+CGG | 0.485901 | 7_3:-52713412 | None:intergenic |
| GTAGGTTGGACGGCTGGTCG+GGG | 0.489707 | 7_3:-52713410 | None:intergenic |
| TCTTCTTGGCTACTCGTAAG+AGG | 0.493331 | 7_3:+52714349 | Msa1109230:CDS |
| TAATACCTTTGAACGAGCAT+TGG | 0.494955 | 7_3:-52713168 | None:intergenic |
| GCTACTCGTAAGAGGAAGTC+TGG | 0.496029 | 7_3:+52714357 | Msa1109230:CDS |
| GTTGCTTTAGCAAGATATCC+AGG | 0.497813 | 7_3:-52713194 | None:intergenic |
| AAGACCATCATACGCCCAAT+TGG | 0.499185 | 7_3:+52713596 | Msa1109230:CDS |
| GGAAGCTTTAGAGAATCAAT+CGG | 0.509751 | 7_3:+52715265 | Msa1109230:CDS |
| GGACATCTAGTTCTTTAGGT+TGG | 0.514643 | 7_3:-52713361 | None:intergenic |
| AGATCAGTAGGTTGGACGGC+TGG | 0.515008 | 7_3:-52713416 | None:intergenic |
| GCATTAGCACCATCTTTGCT+AGG | 0.518356 | 7_3:-52713722 | None:intergenic |
| TTAGGTTGGACGGCTGGTCG+GGG | 0.518978 | 7_3:-52713347 | None:intergenic |
| GAATCAATTCTCTACTGCTA+TGG | 0.520159 | 7_3:+52715223 | Msa1109230:CDS |
| TTGACCAATTGGGCGTATGA+TGG | 0.526388 | 7_3:-52713600 | None:intergenic |
| GAGGTGGGCTCAACTGGCCG+TGG | 0.535224 | 7_3:-52713266 | None:intergenic |
| ACCTGACCCACCAGCACCAG+TGG | 0.536903 | 7_3:+52713448 | Msa1109230:CDS |
| GCAGATGATCATCCTCCTCA+AGG | 0.541005 | 7_3:-52713511 | None:intergenic |
| AAGAGTTCATCAGGATGGAT+AGG | 0.544009 | 7_3:-52714330 | None:intergenic |
| CTGACAGGAATATGTTTCAT+GGG | 0.544185 | 7_3:+52713939 | Msa1109230:intron |
| GTAAGAGGAAGTCTGGCGAT+TGG | 0.544893 | 7_3:+52714364 | Msa1109230:CDS |
| CGTTCAAAGGTATTACAACC+TGG | 0.548147 | 7_3:+52713176 | Msa1109230:CDS |
| ATCATACGCCCAATTGGTCA+AGG | 0.549638 | 7_3:+52713602 | Msa1109230:CDS |
| TGTCCATACCACAGGTCGTA+AGG | 0.551241 | 7_3:+52714176 | Msa1109230:CDS |
| GGTAGGACCACTGGTGCTGG+TGG | 0.551590 | 7_3:-52713455 | None:intergenic |
| TGACCTCACCTAATGTTTGT+TGG | 0.552315 | 7_3:+52715370 | Msa1109230:exon |
| GTTTCAAACCATAGATCTTG+AGG | 0.552921 | 7_3:-52713803 | None:intergenic |
| AAACACACATACCGAGCAAG+AGG | 0.553474 | 7_3:+52713550 | Msa1109230:CDS |
| TCAAGGGAAGGTAGTGATGC+CGG | 0.557311 | 7_3:-52713494 | None:intergenic |
| TCTGATTGATCATCAAGAGC+AGG | 0.560143 | 7_3:-52715344 | None:intergenic |
| GGTTGGACATCTAGATCAGT+AGG | 0.560943 | 7_3:-52713428 | None:intergenic |
| TTCCACCAATGCTCGTTCAA+AGG | 0.564669 | 7_3:+52713163 | Msa1109230:CDS |
| TTAGAGAATCAATCGGGCAA+TGG | 0.569674 | 7_3:+52715272 | Msa1109230:CDS |
| AATCGGGGTTCGGGCAAAGG+AGG | 0.570234 | 7_3:+52714150 | Msa1109230:CDS |
| GAGCCTTACGACCTGTGGTA+TGG | 0.575889 | 7_3:-52714179 | None:intergenic |
| ACTTGAGAAGGTAGGACCAC+TGG | 0.576985 | 7_3:-52713464 | None:intergenic |
| GGTTGGACGGCTGGTCGGGG+AGG | 0.577584 | 7_3:-52713407 | None:intergenic |
| CCAAGAAGAGTTCATCAGGA+TGG | 0.580522 | 7_3:-52714335 | None:intergenic |
| CCACGACGTGGCACTAGACA+TGG | 0.582481 | 7_3:+52714203 | Msa1109230:CDS |
| GAAGGTAGGACCACTGGTGC+TGG | 0.582738 | 7_3:-52713458 | None:intergenic |
| GGAAGAATTCAGGAAGCGCA+TGG | 0.584480 | 7_3:+52715244 | Msa1109230:CDS |
| GATCATCTGCAAGGTGTGCA+GGG | 0.585289 | 7_3:+52713524 | Msa1109230:CDS |
| GCCGGTGCAGTCACTTGAGA+AGG | 0.587439 | 7_3:-52713476 | None:intergenic |
| GATTGAAATGTTTCGTCAGG+AGG | 0.588208 | 7_3:+52715124 | Msa1109230:CDS |
| ATCTAGATCAGTAGGTTGGA+CGG | 0.588695 | 7_3:-52713420 | None:intergenic |
| TAATGGTGATATGCAAGAGG+TGG | 0.590246 | 7_3:+52714956 | Msa1109230:CDS |
| TATAATAGCATCTTTCTTAG+GGG | 0.592529 | 7_3:-52713573 | None:intergenic |
| ATGGGAGAGGATGCATATGC+TGG | 0.593184 | 7_3:+52714069 | Msa1109230:CDS |
| GATTGGGTTGACAGTCGTGC+TGG | 0.597801 | 7_3:+52714381 | Msa1109230:CDS |
| TGCTCTTGATGATCAATCAG+AGG | 0.598343 | 7_3:+52715346 | Msa1109230:CDS |
| TTATCTTTCAACATTAGACC+AGG | 0.600042 | 7_3:+52715056 | Msa1109230:CDS |
| ATTATGGGTAGATGTTGCTG+GGG | 0.600229 | 7_3:+52714998 | Msa1109230:CDS |
| AAGACCTAAATGGATGGGAG+AGG | 0.600614 | 7_3:+52714056 | Msa1109230:CDS |
| GATATCTTGCTAAAGCAACC+AGG | 0.601805 | 7_3:+52713198 | Msa1109230:CDS |
| GGAGGAGCTGTCCATACCAC+AGG | 0.602462 | 7_3:+52714168 | Msa1109230:CDS |
| GAAGCTTTAGAGAATCAATC+GGG | 0.602628 | 7_3:+52715266 | Msa1109230:CDS |
| CAGATGATCATCCTCCTCAA+GGG | 0.604430 | 7_3:-52713510 | None:intergenic |
| ACTGACAGTGTAAAATACTT+GGG | 0.608198 | 7_3:+52714304 | Msa1109230:intron |
| AAAATGACTAGACAATGTCA+TGG | 0.611773 | 7_3:+52713122 | Msa1109230:exon |
| ATCACTACCTTCCCTTGAGG+AGG | 0.612047 | 7_3:+52713499 | Msa1109230:CDS |
| GGACATCTAGATCAGTAGGT+TGG | 0.615244 | 7_3:-52713424 | None:intergenic |
| TTATGGGTAGATGTTGCTGG+GGG | 0.616713 | 7_3:+52714999 | Msa1109230:CDS |
| AATGGTGATATGCAAGAGGT+GGG | 0.621480 | 7_3:+52714957 | Msa1109230:CDS |
| GGGGAAAGACCTAAATGGAT+GGG | 0.621645 | 7_3:+52714051 | Msa1109230:CDS |
| TCACAAAACAAGACTAATCG+GGG | 0.623382 | 7_3:+52714135 | Msa1109230:CDS |
| TGAGTCAGATGACTTACACC+TGG | 0.624603 | 7_3:-52715074 | None:intergenic |
| ACCTTCTCAAGTGACTGCAC+CGG | 0.628487 | 7_3:+52713475 | Msa1109230:CDS |
| TTCTAATGGTGATATGCAAG+AGG | 0.631960 | 7_3:+52714953 | Msa1109230:CDS |
| TTAACCAAAACTAGTGACAC+AGG | 0.635406 | 7_3:+52715554 | Msa1109230:three_prime_UTR |
| TGATCATCCTCCTCAAGGGA+AGG | 0.637079 | 7_3:-52713506 | None:intergenic |
| GAGGAGGATGATCATCTGCA+AGG | 0.643850 | 7_3:+52713515 | Msa1109230:CDS |
| ATGTTGTCCTCCTGAAAATG+AGG | 0.644414 | 7_3:+52715100 | Msa1109230:CDS |
| GTGCAGTCACTTGAGAAGGT+AGG | 0.645618 | 7_3:-52713472 | None:intergenic |
| TCAAGAGCAGGATCATAATG+TGG | 0.646262 | 7_3:-52715332 | None:intergenic |
| GGCATCACTACCTTCCCTTG+AGG | 0.646807 | 7_3:+52713496 | Msa1109230:CDS |
| GTAGGACCACTGGTGCTGGT+GGG | 0.647578 | 7_3:-52713454 | None:intergenic |
| TCATACGCCCAATTGGTCAA+GGG | 0.653662 | 7_3:+52713603 | Msa1109230:CDS |
| AGGTAATTGTTATGGTACTG+GGG | 0.660624 | 7_3:+52715031 | Msa1109230:CDS |
| TGGTGCTAATGCAATGAGGA+TGG | 0.662918 | 7_3:+52713733 | Msa1109230:CDS |
| ATGGGAGACTCAATATGATG+CGG | 0.663539 | 7_3:+52713957 | Msa1109230:CDS |
| ACACCAACAAACATTAGGTG+AGG | 0.663720 | 7_3:-52715373 | None:intergenic |
| TCACCAATTGAAAGAGAACA+TGG | 0.665912 | 7_3:-52715448 | None:intergenic |
| GTGGTGAGCCTTACGACCTG+TGG | 0.668031 | 7_3:-52714184 | None:intergenic |
| GGTGATATGCAAGAGGTGGG+CGG | 0.675105 | 7_3:+52714960 | Msa1109230:CDS |
| CCATGTCTAGTGCCACGTCG+TGG | 0.693029 | 7_3:-52714203 | None:intergenic |
| AATTGAAAGAGAACATGGTG+AGG | 0.697328 | 7_3:-52715443 | None:intergenic |
| TCGTAAGGCTCACCACGACG+TGG | 0.712195 | 7_3:+52714191 | Msa1109230:CDS |
| AATCCAAAAGACATCAACTG+TGG | 0.734923 | 7_3:+52713295 | Msa1109230:CDS |
| AAGATGGTGCTAATGCAATG+AGG | 0.735156 | 7_3:+52713729 | Msa1109230:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TCTTTTCTTTTTTATTTTAT+TGG | + | chr7_3:52711513-52711532 | Msa1109230:intron | 10.0% |
| !!! | TTTTTTTTTTTTTTTTGAGA+AGG | - | chr7_3:52711624-52711643 | None:intergenic | 10.0% |
| !!! | ATTATATTTTGTTTATTGTT+TGG | + | chr7_3:52712054-52712073 | Msa1109230:intron | 10.0% |
| !!! | TATAATTTTAGAAAAACAAT+CGG | - | chr7_3:52712137-52712156 | None:intergenic | 10.0% |
| !! | TTTAATTATAATTTCAAACA+CGG | - | chr7_3:52712894-52712913 | None:intergenic | 10.0% |
| !! | TATATATATTCCTATGAATA+TGG | - | chr7_3:52710683-52710702 | None:intergenic | 15.0% |
| !! | ATTCATAGGAATATATATAT+AGG | + | chr7_3:52710684-52710703 | Msa1109230:intron | 15.0% |
| !!! | TTGTAGTTTTTTTTTTCTTA+GGG | - | chr7_3:52710955-52710974 | None:intergenic | 15.0% |
| !!! | TTTGTAGTTTTTTTTTTCTT+AGG | - | chr7_3:52710956-52710975 | None:intergenic | 15.0% |
| !!! | TTAAATTTTTTTTTGCGTTT+CGG | - | chr7_3:52711015-52711034 | None:intergenic | 15.0% |
| !! | TGCTAAATTTCATATAAAAT+AGG | - | chr7_3:52711348-52711367 | None:intergenic | 15.0% |
| !!! | TTTATTTTATTGGTCAATTT+TGG | + | chr7_3:52711523-52711542 | Msa1109230:intron | 15.0% |
| !! | GAAAAATGAAAAAAAAATGT+GGG | - | chr7_3:52711552-52711571 | None:intergenic | 15.0% |
| !! | TAATGATCAAAATACATATA+TGG | + | chr7_3:52714639-52714658 | Msa1109230:intron | 15.0% |
| !! | ATATGTGAACATATATAATT+TGG | + | chr7_3:52714749-52714768 | Msa1109230:intron | 15.0% |
| !!! | TTTAATTTCTACTAATTGTA+TGG | + | chr7_3:52715499-52715518 | Msa1109230:three_prime_UTR | 15.0% |
| !!! | TATTTATCTTTTCAAACGTA+AGG | + | chr7_3:52710576-52710595 | Msa1109230:intron | 20.0% |
| !! | TTATTATTGATCTAAACACA+TGG | + | chr7_3:52710641-52710660 | Msa1109230:intron | 20.0% |
| !!! | TGTAGTTTTTTTTTTCTTAG+GGG | - | chr7_3:52710954-52710973 | None:intergenic | 20.0% |
| !!! | TAAATTTTTTTTTGCGTTTC+GGG | - | chr7_3:52711014-52711033 | None:intergenic | 20.0% |
| !! | AATTTAAAAAAAATGACACG+TGG | + | chr7_3:52711028-52711047 | Msa1109230:intron | 20.0% |
| !!! | TTTTGTAGTTTTTTTCCTTA+AGG | + | chr7_3:52711141-52711160 | Msa1109230:intron | 20.0% |
| !!! | TTTGTAGTTTTTTTCCTTAA+GGG | + | chr7_3:52711142-52711161 | Msa1109230:intron | 20.0% |
| !! | GGAAAAATGAAAAAAAAATG+TGG | - | chr7_3:52711553-52711572 | None:intergenic | 20.0% |
| !! | TTCTCGTTCATTTAATTAAA+AGG | + | chr7_3:52712252-52712271 | Msa1109230:intron | 20.0% |
| !! | TCTCGTTCATTTAATTAAAA+GGG | + | chr7_3:52712253-52712272 | Msa1109230:intron | 20.0% |
| !!! | TTGATATTTTTGTTTGTGTT+TGG | + | chr7_3:52712759-52712778 | Msa1109230:intron | 20.0% |
| !! | TTATAATAGCATCTTTCTTA+GGG | - | chr7_3:52713577-52713596 | None:intergenic | 20.0% |
| !! | TTTATAATAGCATCTTTCTT+AGG | - | chr7_3:52713578-52713597 | None:intergenic | 20.0% |
| !! | CTTACAAAAGTAAGATATAA+GGG | + | chr7_3:52714030-52714049 | Msa1109230:intron | 20.0% |
| !! | TTACAAAAGTAAGATATAAG+GGG | + | chr7_3:52714031-52714050 | Msa1109230:intron | 20.0% |
| !! | AGATATTAAAGAAATTGGAA+TGG | - | chr7_3:52714236-52714255 | None:intergenic | 20.0% |
| !! | GAACTAGATATTAAAGAAAT+TGG | - | chr7_3:52714241-52714260 | None:intergenic | 20.0% |
| !!! | AGACATTACTATTTGTTTTA+TGG | + | chr7_3:52714277-52714296 | Msa1109230:intron | 20.0% |
| !! | ATATGTGAACATATATATTC+TGG | + | chr7_3:52714525-52714544 | Msa1109230:intron | 20.0% |
| !!! | AATAAGTTGTGTTTTTTTAC+AGG | + | chr7_3:52714884-52714903 | Msa1109230:intron | 20.0% |
| !! | TTTGGTTAACCAAAAAAATT+TGG | - | chr7_3:52715543-52715562 | None:intergenic | 20.0% |
| ! | CTATGAATATGGAAAATGTA+TGG | - | chr7_3:52710672-52710691 | None:intergenic | 25.0% |
| !! | CATACATTTTCCATATTCAT+AGG | + | chr7_3:52710670-52710689 | Msa1109230:intron | 25.0% |
| !! | TGACAACTACATATAGTTTT+TGG | + | chr7_3:52710879-52710898 | Msa1109230:intron | 25.0% |
| !!! | GTAGTTTTTTTTTTCTTAGG+GGG | - | chr7_3:52710953-52710972 | None:intergenic | 25.0% |
| !!! | TTTTGGAAATGTAGCAATTT+TGG | + | chr7_3:52710987-52711006 | Msa1109230:intron | 25.0% |
| !!! | AAATTTTTTTTTGCGTTTCG+GGG | - | chr7_3:52711013-52711032 | None:intergenic | 25.0% |
| !!! | TTGTAGTTTTTTTCCTTAAG+GGG | + | chr7_3:52711143-52711162 | Msa1109230:intron | 25.0% |
| !! | AAATTTAGCATCAGATTTTG+TGG | - | chr7_3:52711432-52711451 | None:intergenic | 25.0% |
| !! | AAGGTGTTATGAGATATTTA+GGG | - | chr7_3:52711605-52711624 | None:intergenic | 25.0% |
| !!! | ATTTTGAGAAGTGATTTTGA+GGG | - | chr7_3:52711723-52711742 | None:intergenic | 25.0% |
| !!! | ATTTTGGGATTGATTTTGTT+AGG | - | chr7_3:52711828-52711847 | None:intergenic | 25.0% |
| !! | AAGGGTTTAAGAACAATTTT+GGG | - | chr7_3:52711843-52711862 | None:intergenic | 25.0% |
| !! | TAAGGGTTTAAGAACAATTT+TGG | - | chr7_3:52711844-52711863 | None:intergenic | 25.0% |
| ! | ATCTAAACCATAAGAGAAAA+AGG | - | chr7_3:52711989-52712008 | None:intergenic | 25.0% |
| !!! | GATTTGTGAAGATGTTTTAA+TGG | + | chr7_3:52712006-52712025 | Msa1109230:intron | 25.0% |
| ! | TGAAAAGTTATGAGCTTATA+CGG | + | chr7_3:52712197-52712216 | Msa1109230:intron | 25.0% |
| !!! | GGCATTTTGTTTGATATTTT+AGG | + | chr7_3:52712348-52712367 | Msa1109230:intron | 25.0% |
| ! | TTTCAAACATTAGATGCATA+TGG | + | chr7_3:52712492-52712511 | Msa1109230:intron | 25.0% |
| ! | CAATAAATCTTCATCAAAGT+CGG | + | chr7_3:52712914-52712933 | Msa1109230:intron | 25.0% |
| ! | TATAATAGCATCTTTCTTAG+GGG | - | chr7_3:52713576-52713595 | None:intergenic | 25.0% |
| !!! | TCTATGGTTTGAAACATTTT+CGG | + | chr7_3:52713811-52713830 | Msa1109230:CDS | 25.0% |
| !! | AAAGAATAATGTTGCTTCAT+TGG | + | chr7_3:52713844-52713863 | Msa1109230:intron | 25.0% |
| !!! | CTATTTTTATATTGTCTGAC+AGG | + | chr7_3:52713924-52713943 | Msa1109230:intron | 25.0% |
| ! | GCTTACAAAAGTAAGATATA+AGG | + | chr7_3:52714029-52714048 | Msa1109230:intron | 25.0% |
| ! | TACAAAAGTAAGATATAAGG+GGG | + | chr7_3:52714032-52714051 | Msa1109230:intron | 25.0% |
| ! | AAGATTGATGAGAATTCTAA+TGG | + | chr7_3:52714939-52714958 | Msa1109230:CDS | 25.0% |
| !!! | GTTGGTGTTTTAGTTTTTTT+TGG | + | chr7_3:52715388-52715407 | Msa1109230:three_prime_UTR | 25.0% |
| !!! | CAACATATGCCAAATTTTTT+TGG | + | chr7_3:52715531-52715550 | Msa1109230:three_prime_UTR | 25.0% |
| GTTGTTCAAGAGAAAATTGT+GGG | - | chr7_3:52710818-52710837 | None:intergenic | 30.0% | |
| AGTTGTTCAAGAGAAAATTG+TGG | - | chr7_3:52710819-52710838 | None:intergenic | 30.0% | |
| TACATTTCCAAAACTTAGGT+CGG | - | chr7_3:52710980-52710999 | None:intergenic | 30.0% | |
| TTGCTACATTTCCAAAACTT+AGG | - | chr7_3:52710984-52711003 | None:intergenic | 30.0% | |
| !! | ATGCTCTGAAGCTAAAAAAA+TGG | - | chr7_3:52711251-52711270 | None:intergenic | 30.0% |
| TGGATGCTATTAGTCAAATT+TGG | - | chr7_3:52711412-52711431 | None:intergenic | 30.0% | |
| ! | GGAAGTGTGAAAAAATTTGT+GGG | - | chr7_3:52711574-52711593 | None:intergenic | 30.0% |
| !! | GAAGGTGTTATGAGATATTT+AGG | - | chr7_3:52711606-52711625 | None:intergenic | 30.0% |
| ! | AAATCACGTTTGTGTGTTTT+GGG | - | chr7_3:52711659-52711678 | None:intergenic | 30.0% |
| ! | AGAATTGATTCAGAGTTTCA+TGG | - | chr7_3:52711698-52711717 | None:intergenic | 30.0% |
| !! | GATTTTGAGAAGTGATTTTG+AGG | - | chr7_3:52711724-52711743 | None:intergenic | 30.0% |
| !! | TTTTGAGAAGTGATTATGAG+TGG | - | chr7_3:52711763-52711782 | None:intergenic | 30.0% |
| ! | CAACACAAATTGGGAATTTT+AGG | - | chr7_3:52711797-52711816 | None:intergenic | 30.0% |
| GTTTAGGAACAACACAAATT+GGG | - | chr7_3:52711806-52711825 | None:intergenic | 30.0% | |
| !! | GGATTGATTTTGTTAGGTTT+AGG | - | chr7_3:52711822-52711841 | None:intergenic | 30.0% |
| CAGTTTGAGAAGAAATTGAA+CGG | - | chr7_3:52711940-52711959 | None:intergenic | 30.0% | |
| !! | TAGGCTATTTTGTTTGTGAA+TGG | + | chr7_3:52712367-52712386 | Msa1109230:intron | 30.0% |
| !! | AGGCTATTTTGTTTGTGAAT+GGG | + | chr7_3:52712368-52712387 | Msa1109230:intron | 30.0% |
| !! | ATTTTGTTTGTGAATGGGTT+TGG | + | chr7_3:52712373-52712392 | Msa1109230:intron | 30.0% |
| TATGAGCATGCTTATTAATG+AGG | + | chr7_3:52712439-52712458 | Msa1109230:intron | 30.0% | |
| !! | TTTTTGTTTGTGTTTGGTTG+TGG | + | chr7_3:52712765-52712784 | Msa1109230:intron | 30.0% |
| !! | TTTTGTTTGTGTTTGGTTGT+GGG | + | chr7_3:52712766-52712785 | Msa1109230:intron | 30.0% |
| !! | TGTGAATTTTGGTACTGTAA+TGG | + | chr7_3:52712810-52712829 | Msa1109230:intron | 30.0% |
| TATTTGTATTAACAGTGCAC+TGG | + | chr7_3:52712995-52713014 | Msa1109230:intron | 30.0% | |
| AAAATGACTAGACAATGTCA+TGG | + | chr7_3:52713122-52713141 | Msa1109230:exon | 30.0% | |
| TAAAATACCCTTGACCAATT+GGG | - | chr7_3:52713613-52713632 | None:intergenic | 30.0% | |
| ATAAAATACCCTTGACCAAT+TGG | - | chr7_3:52713614-52713633 | None:intergenic | 30.0% | |
| CTTCACAAAACAAGACTAAT+CGG | + | chr7_3:52714133-52714152 | Msa1109230:CDS | 30.0% | |
| TTCACAAAACAAGACTAATC+GGG | + | chr7_3:52714134-52714153 | Msa1109230:CDS | 30.0% | |
| ACTGACAGTGTAAAATACTT+GGG | + | chr7_3:52714304-52714323 | Msa1109230:intron | 30.0% | |
| CACAAGCACATAATGAATTA+TGG | - | chr7_3:52714568-52714587 | None:intergenic | 30.0% | |
| ATGGATAAGTTATGTAAACC+TGG | + | chr7_3:52714658-52714677 | Msa1109230:intron | 30.0% | |
| TAACACATATCTCAAGATTG+TGG | - | chr7_3:52714725-52714744 | None:intergenic | 30.0% | |
| ! | CAGAAGCACATAATGAATTA+TGG | - | chr7_3:52714792-52714811 | None:intergenic | 30.0% |
| AGAGAAACGACTTCAATTAT+GGG | + | chr7_3:52714983-52715002 | Msa1109230:CDS | 30.0% | |
| ! | ATTTCAATCACCTCATTTTC+AGG | - | chr7_3:52715113-52715132 | None:intergenic | 30.0% |
| CTAAAACACCAACAAACATT+AGG | - | chr7_3:52715381-52715400 | None:intergenic | 30.0% | |
| ACACAATTGTGAAGTTCTTA+TGG | + | chr7_3:52715416-52715435 | Msa1109230:three_prime_UTR | 30.0% | |
| ! | TCGCAACTTTGGAAAAGTTA+GGG | - | chr7_3:52710924-52710943 | None:intergenic | 35.0% |
| ! | ATCGCAACTTTGGAAAAGTT+AGG | - | chr7_3:52710925-52710944 | None:intergenic | 35.0% |
| ! | CTTTTCCAAAGTTGCGATTT+TGG | + | chr7_3:52710927-52710946 | Msa1109230:intron | 35.0% |
| ! | TACAAAACCGACCTAAGTTT+TGG | + | chr7_3:52710970-52710989 | Msa1109230:intron | 35.0% |
| ! | TTTTGCAACTATGGCAGTTT+TGG | - | chr7_3:52711109-52711128 | None:intergenic | 35.0% |
| TGCCATAGTTGCAAAACATA+GGG | + | chr7_3:52711113-52711132 | Msa1109230:intron | 35.0% | |
| CAACTTTCTTGTAGTGACTA+TGG | - | chr7_3:52711217-52711236 | None:intergenic | 35.0% | |
| CAGAATTTGTGGATGCTAAA+TGG | - | chr7_3:52711302-52711321 | None:intergenic | 35.0% | |
| TGCATTTGCATCAGAATTTG+TGG | - | chr7_3:52711313-52711332 | None:intergenic | 35.0% | |
| ! | GGGAAGTGTGAAAAAATTTG+TGG | - | chr7_3:52711575-52711594 | None:intergenic | 35.0% |
| ! | GAGATATTTAGGGAAAGTGT+GGG | - | chr7_3:52711595-52711614 | None:intergenic | 35.0% |
| TGAGATATTTAGGGAAAGTG+TGG | - | chr7_3:52711596-52711615 | None:intergenic | 35.0% | |
| ! | GAAATCACGTTTGTGTGTTT+TGG | - | chr7_3:52711660-52711679 | None:intergenic | 35.0% |
| GGTTTAGGAACAACACAAAT+TGG | - | chr7_3:52711807-52711826 | None:intergenic | 35.0% | |
| ! | ATGCGATTTGGAGAGATTAA+GGG | - | chr7_3:52711861-52711880 | None:intergenic | 35.0% |
| ! | AATGCGATTTGGAGAGATTA+AGG | - | chr7_3:52711862-52711881 | None:intergenic | 35.0% |
| ATTTGAGGAATCGAACTTGA+AGG | - | chr7_3:52711899-52711918 | None:intergenic | 35.0% | |
| CGTTCAATTTCTTCTCAAAC+TGG | + | chr7_3:52711938-52711957 | Msa1109230:intron | 35.0% | |
| ! | CAACTGTCCTTTTTCTCTTA+TGG | + | chr7_3:52711979-52711998 | Msa1109230:intron | 35.0% |
| ACATTAGATGCATATGGAGA+TGG | + | chr7_3:52712498-52712517 | Msa1109230:intron | 35.0% | |
| !!! | CTTATTTTACGAGTGGAGTT+GGG | + | chr7_3:52712550-52712569 | Msa1109230:intron | 35.0% |
| ! | TAAGCTATGGGTGTGAATTT+TGG | + | chr7_3:52712799-52712818 | Msa1109230:intron | 35.0% |
| CAACCATTACTTCATGCTTT+CGG | + | chr7_3:52713043-52713062 | Msa1109230:intron | 35.0% | |
| TAATACCTTTGAACGAGCAT+TGG | - | chr7_3:52713171-52713190 | None:intergenic | 35.0% | |
| ! | GTTGATGTCTTTTGGATTGT+TGG | - | chr7_3:52713293-52713312 | None:intergenic | 35.0% |
| AATCCAAAAGACATCAACTG+TGG | + | chr7_3:52713295-52713314 | Msa1109230:CDS | 35.0% | |
| !! | ATCTAGTTCTTTAGGTTGGA+CGG | - | chr7_3:52713360-52713379 | None:intergenic | 35.0% |
| AGATTTACACCTAGCAAAGA+TGG | + | chr7_3:52713713-52713732 | Msa1109230:intron | 35.0% | |
| AAAAGGTTCCTCAAGATCTA+TGG | + | chr7_3:52713795-52713814 | Msa1109230:CDS | 35.0% | |
| GTTTCAAACCATAGATCTTG+AGG | - | chr7_3:52713806-52713825 | None:intergenic | 35.0% | |
| !! | GGTTTGAAACATTTTCGGTA+AGG | + | chr7_3:52713816-52713835 | Msa1109230:intron | 35.0% |
| TCTGACAGGAATATGTTTCA+TGG | + | chr7_3:52713938-52713957 | Msa1109230:intron | 35.0% | |
| CTGACAGGAATATGTTTCAT+GGG | + | chr7_3:52713939-52713958 | Msa1109230:intron | 35.0% | |
| ! | CTTTTGTAAGCATGTCAGTA+AGG | - | chr7_3:52714020-52714039 | None:intergenic | 35.0% |
| !! | ATGCTGGTCTTCTTGAATAT+TGG | + | chr7_3:52714085-52714104 | Msa1109230:CDS | 35.0% |
| TCACAAAACAAGACTAATCG+GGG | + | chr7_3:52714135-52714154 | Msa1109230:CDS | 35.0% | |
| GACTGACAGTGTAAAATACT+TGG | + | chr7_3:52714303-52714322 | Msa1109230:intron | 35.0% | |
| TCTCAAATTGCAAGTATTCC+AGG | - | chr7_3:52714679-52714698 | None:intergenic | 35.0% | |
| CTCAAGATTGTGGACATATT+CGG | - | chr7_3:52714715-52714734 | None:intergenic | 35.0% | |
| TTCTAATGGTGATATGCAAG+AGG | + | chr7_3:52714953-52714972 | Msa1109230:CDS | 35.0% | |
| GAGAGAAACGACTTCAATTA+TGG | + | chr7_3:52714982-52715001 | Msa1109230:CDS | 35.0% | |
| AATTATGGGTAGATGTTGCT+GGG | + | chr7_3:52714997-52715016 | Msa1109230:CDS | 35.0% | |
| TTGTCTCGAGGTAATTGTTA+TGG | + | chr7_3:52715023-52715042 | Msa1109230:CDS | 35.0% | |
| GAGGTAATTGTTATGGTACT+GGG | + | chr7_3:52715030-52715049 | Msa1109230:CDS | 35.0% | |
| AGGTAATTGTTATGGTACTG+GGG | + | chr7_3:52715031-52715050 | Msa1109230:CDS | 35.0% | |
| GAATCAATTCTCTACTGCTA+TGG | + | chr7_3:52715223-52715242 | Msa1109230:CDS | 35.0% | |
| !! | GGAAGCTTTAGAGAATCAAT+CGG | + | chr7_3:52715265-52715284 | Msa1109230:CDS | 35.0% |
| !! | GAAGCTTTAGAGAATCAATC+GGG | + | chr7_3:52715266-52715285 | Msa1109230:CDS | 35.0% |
| AATTGAAAGAGAACATGGTG+AGG | - | chr7_3:52715446-52715465 | None:intergenic | 35.0% | |
| TCACCATGTTCTCTTTCAAT+TGG | + | chr7_3:52715445-52715464 | Msa1109230:three_prime_UTR | 35.0% | |
| TCACCAATTGAAAGAGAACA+TGG | - | chr7_3:52715451-52715470 | None:intergenic | 35.0% | |
| !!! | ATTGGTGACGTGTTATGTTT+TGG | + | chr7_3:52715463-52715482 | Msa1109230:three_prime_UTR | 35.0% |
| !!! | TTGGTGACGTGTTATGTTTT+GGG | + | chr7_3:52715464-52715483 | Msa1109230:three_prime_UTR | 35.0% |
| TTAACCAAAACTAGTGACAC+AGG | + | chr7_3:52715554-52715573 | Msa1109230:three_prime_UTR | 35.0% | |
| !! | ATAACCTGTGTCACTAGTTT+TGG | - | chr7_3:52715561-52715580 | None:intergenic | 35.0% |
| ! | TAGTGACACAGGTTATGTTT+TGG | + | chr7_3:52715565-52715584 | Msa1109230:three_prime_UTR | 35.0% |
| ! | GCAACTTTGGAAAAGTTAGG+GGG | - | chr7_3:52710922-52710941 | None:intergenic | 40.0% |
| ! | CGCAACTTTGGAAAAGTTAG+GGG | - | chr7_3:52710923-52710942 | None:intergenic | 40.0% |
| CTGCCATAGTTGCAAAACAT+AGG | + | chr7_3:52711112-52711131 | Msa1109230:intron | 40.0% | |
| GCCATAGTTGCAAAACATAG+GGG | + | chr7_3:52711114-52711133 | Msa1109230:intron | 40.0% | |
| CCATAGTTGCAAAACATAGG+GGG | + | chr7_3:52711115-52711134 | Msa1109230:intron | 40.0% | |
| ! | CTTTCCCAAAGTTGCGATTT+TGG | - | chr7_3:52711169-52711188 | None:intergenic | 40.0% |
| ! | ATCGCAACTTTGGGAAAGTT+CGG | + | chr7_3:52711171-52711190 | Msa1109230:intron | 40.0% |
| GTTTCATGGTTTGAGAGGAA+AGG | - | chr7_3:52711684-52711703 | None:intergenic | 40.0% | |
| TCAGAGTTTCATGGTTTGAG+AGG | - | chr7_3:52711689-52711708 | None:intergenic | 40.0% | |
| GAGAAGTGATTATGAGTGGT+GGG | - | chr7_3:52711759-52711778 | None:intergenic | 40.0% | |
| TGAGAAGTGATTATGAGTGG+TGG | - | chr7_3:52711760-52711779 | None:intergenic | 40.0% | |
| AAAGCTTCACAGCAGATTTG+AGG | - | chr7_3:52711914-52711933 | None:intergenic | 40.0% | |
| ! | TTGTTTGTGAATGGGTTTGG+TGG | + | chr7_3:52712376-52712395 | Msa1109230:intron | 40.0% |
| !!! | GCTTATTTTACGAGTGGAGT+TGG | + | chr7_3:52712549-52712568 | Msa1109230:intron | 40.0% |
| !!! | AGTGTTTTCTGGGACTGTTT+TGG | + | chr7_3:52712716-52712735 | Msa1109230:intron | 40.0% |
| !! | CAAAGTCGGTGTTTTCAGTA+TGG | + | chr7_3:52712928-52712947 | Msa1109230:intron | 40.0% |
| ! | CGAAAGCATGAAGTAATGGT+TGG | - | chr7_3:52713045-52713064 | None:intergenic | 40.0% |
| ! | CAACCGAAAGCATGAAGTAA+TGG | - | chr7_3:52713049-52713068 | None:intergenic | 40.0% |
| !! | CGTTCAAAGGTATTACAACC+TGG | + | chr7_3:52713176-52713195 | Msa1109230:CDS | 40.0% |
| ! | GTTGCTTTAGCAAGATATCC+AGG | - | chr7_3:52713197-52713216 | None:intergenic | 40.0% |
| GATATCTTGCTAAAGCAACC+AGG | + | chr7_3:52713198-52713217 | Msa1109230:CDS | 40.0% | |
| !!! | GTGGCAACCCTAGTTTTTTT+CGG | - | chr7_3:52713250-52713269 | None:intergenic | 40.0% |
| GAAAAAAACTAGGGTTGCCA+CGG | + | chr7_3:52713249-52713268 | Msa1109230:CDS | 40.0% | |
| !! | TTTTGGATTGTTGGTGAGGT+GGG | - | chr7_3:52713284-52713303 | None:intergenic | 40.0% |
| ! | TGTCTTTTGGATTGTTGGTG+AGG | - | chr7_3:52713288-52713307 | None:intergenic | 40.0% |
| !! | GGACATCTAGTTCTTTAGGT+TGG | - | chr7_3:52713364-52713383 | None:intergenic | 40.0% |
| !! | GGTTGGACATCTAGTTCTTT+AGG | - | chr7_3:52713368-52713387 | None:intergenic | 40.0% |
| ! | ATCTAGATCAGTAGGTTGGA+CGG | - | chr7_3:52713423-52713442 | None:intergenic | 40.0% |
| ! | AAGATGGTGCTAATGCAATG+AGG | + | chr7_3:52713729-52713748 | Msa1109230:CDS | 40.0% |
| ATGCAATGAGGATGGCTATT+AGG | + | chr7_3:52713741-52713760 | Msa1109230:CDS | 40.0% | |
| TGGCTATTAGGCGTCAATTT+CGG | + | chr7_3:52713753-52713772 | Msa1109230:CDS | 40.0% | |
| !!! | TGTTTTTTCGTGCTGGGAAA+AGG | + | chr7_3:52713778-52713797 | Msa1109230:CDS | 40.0% |
| ! | GCTTCATTGGTTGAAAACTG+TGG | + | chr7_3:52713857-52713876 | Msa1109230:intron | 40.0% |
| ! | CATATTTCTGCAGTAGCCAA+AGG | - | chr7_3:52713892-52713911 | None:intergenic | 40.0% |
| ATGGGAGACTCAATATGATG+CGG | + | chr7_3:52713957-52713976 | Msa1109230:CDS | 40.0% | |
| CTCAATATGATGCGGAAATC+AGG | + | chr7_3:52713965-52713984 | Msa1109230:CDS | 40.0% | |
| ATAAGGGGGAAAGACCTAAA+TGG | + | chr7_3:52714046-52714065 | Msa1109230:intron | 40.0% | |
| AAACAAGACTAATCGGGGTT+CGG | + | chr7_3:52714140-52714159 | Msa1109230:CDS | 40.0% | |
| AAGAGTTCATCAGGATGGAT+AGG | - | chr7_3:52714333-52714352 | None:intergenic | 40.0% | |
| CAATCTTCGTTAGTTGAGTC+AGG | - | chr7_3:52714926-52714945 | None:intergenic | 40.0% | |
| TAATGGTGATATGCAAGAGG+TGG | + | chr7_3:52714956-52714975 | Msa1109230:CDS | 40.0% | |
| AATGGTGATATGCAAGAGGT+GGG | + | chr7_3:52714957-52714976 | Msa1109230:CDS | 40.0% | |
| CAATTATGGGTAGATGTTGC+TGG | + | chr7_3:52714996-52715015 | Msa1109230:CDS | 40.0% | |
| ATTATGGGTAGATGTTGCTG+GGG | + | chr7_3:52714998-52715017 | Msa1109230:CDS | 40.0% | |
| CGAGGTAATTGTTATGGTAC+TGG | + | chr7_3:52715029-52715048 | Msa1109230:CDS | 40.0% | |
| ATGTTGTCCTCCTGAAAATG+AGG | + | chr7_3:52715100-52715119 | Msa1109230:CDS | 40.0% | |
| !! | TCAATCACCTCATTTTCAGG+AGG | - | chr7_3:52715110-52715129 | None:intergenic | 40.0% |
| GGTGATTGAAATGTTTCGTC+AGG | + | chr7_3:52715121-52715140 | Msa1109230:CDS | 40.0% | |
| GATTGAAATGTTTCGTCAGG+AGG | + | chr7_3:52715124-52715143 | Msa1109230:CDS | 40.0% | |
| CTACTGCTATGGAAGAATTC+AGG | + | chr7_3:52715234-52715253 | Msa1109230:CDS | 40.0% | |
| TTAGAGAATCAATCGGGCAA+TGG | + | chr7_3:52715272-52715291 | Msa1109230:CDS | 40.0% | |
| TCAAGAGCAGGATCATAATG+TGG | - | chr7_3:52715335-52715354 | None:intergenic | 40.0% | |
| TCTGATTGATCATCAAGAGC+AGG | - | chr7_3:52715347-52715366 | None:intergenic | 40.0% | |
| ! | TGCTCTTGATGATCAATCAG+AGG | + | chr7_3:52715346-52715365 | Msa1109230:CDS | 40.0% |
| TGACCTCACCTAATGTTTGT+TGG | + | chr7_3:52715370-52715389 | Msa1109230:exon | 40.0% | |
| ACACCAACAAACATTAGGTG+AGG | - | chr7_3:52715376-52715395 | None:intergenic | 40.0% | |
| !!! | CGTGTTATGTTTTGGGTTGT+AGG | + | chr7_3:52715471-52715490 | Msa1109230:three_prime_UTR | 40.0% |
| !!! | AGGTTATGTTTTGGCGCTTT+AGG | + | chr7_3:52715574-52715593 | Msa1109230:three_prime_UTR | 40.0% |
| AGCGTAGACCGAGTCAAAAT+TGG | + | chr7_3:52711074-52711093 | Msa1109230:intron | 45.0% | |
| !! | ACCGAGTCAAAATTGGCCTT+GGG | + | chr7_3:52711081-52711100 | Msa1109230:intron | 45.0% |
| ! | CCCCCTATGTTTTGCAACTA+TGG | - | chr7_3:52711118-52711137 | None:intergenic | 45.0% |
| TAGTTGCAAAACATAGGGGG+CGG | + | chr7_3:52711118-52711137 | Msa1109230:intron | 45.0% | |
| CAATCAGCGAGAATGCGATT+TGG | - | chr7_3:52711873-52711892 | None:intergenic | 45.0% | |
| TGCATATGGAGATGGATGCT+AGG | + | chr7_3:52712506-52712525 | Msa1109230:intron | 45.0% | |
| CACTCGTAAAATAAGCACGC+CGG | - | chr7_3:52712545-52712564 | None:intergenic | 45.0% | |
| TACCTCAAGAGGCAATCTCT+AGG | - | chr7_3:52712578-52712597 | None:intergenic | 45.0% | |
| AGAGATTGCCTCTTGAGGTA+AGG | + | chr7_3:52712578-52712597 | Msa1109230:intron | 45.0% | |
| !!! | TTTTCTGGGACTGTTTTGGC+AGG | + | chr7_3:52712720-52712739 | Msa1109230:intron | 45.0% |
| !!! | TTTCTGGGACTGTTTTGGCA+GGG | + | chr7_3:52712721-52712740 | Msa1109230:intron | 45.0% |
| TGTTTGTGTTTGGTTGTGGG+AGG | + | chr7_3:52712769-52712788 | Msa1109230:intron | 45.0% | |
| TATGCATACATGTCGTGCAC+TGG | - | chr7_3:52712956-52712975 | None:intergenic | 45.0% | |
| TTCCACCAATGCTCGTTCAA+AGG | + | chr7_3:52713163-52713182 | Msa1109230:CDS | 45.0% | |
| !! | TACCTTTGAACGAGCATTGG+TGG | - | chr7_3:52713168-52713187 | None:intergenic | 45.0% |
| GTTGGCTACAACAAGTTTCC+TGG | - | chr7_3:52713219-52713238 | None:intergenic | 45.0% | |
| AGACGCGCCGAAAAAAACTA+GGG | + | chr7_3:52713240-52713259 | Msa1109230:CDS | 45.0% | |
| !! | CTTTTGGATTGTTGGTGAGG+TGG | - | chr7_3:52713285-52713304 | None:intergenic | 45.0% |
| !! | GGACCACAGTTGATGTCTTT+TGG | - | chr7_3:52713301-52713320 | None:intergenic | 45.0% |
| GGACATCTAGATCAGTAGGT+TGG | - | chr7_3:52713427-52713446 | None:intergenic | 45.0% | |
| GGTTGGACATCTAGATCAGT+AGG | - | chr7_3:52713431-52713450 | None:intergenic | 45.0% | |
| CAGATGATCATCCTCCTCAA+GGG | - | chr7_3:52713513-52713532 | None:intergenic | 45.0% | |
| AAACACACATACCGAGCAAG+AGG | + | chr7_3:52713550-52713569 | Msa1109230:CDS | 45.0% | |
| AAGACCATCATACGCCCAAT+TGG | + | chr7_3:52713596-52713615 | Msa1109230:CDS | 45.0% | |
| TTGACCAATTGGGCGTATGA+TGG | - | chr7_3:52713603-52713622 | None:intergenic | 45.0% | |
| ATCATACGCCCAATTGGTCA+AGG | + | chr7_3:52713602-52713621 | Msa1109230:CDS | 45.0% | |
| TCATACGCCCAATTGGTCAA+GGG | + | chr7_3:52713603-52713622 | Msa1109230:CDS | 45.0% | |
| GCATTAGCACCATCTTTGCT+AGG | - | chr7_3:52713725-52713744 | None:intergenic | 45.0% | |
| ! | TGGTGCTAATGCAATGAGGA+TGG | + | chr7_3:52713733-52713752 | Msa1109230:CDS | 45.0% |
| GGCTATTAGGCGTCAATTTC+GGG | + | chr7_3:52713754-52713773 | Msa1109230:CDS | 45.0% | |
| !!! | TTCGGGATGTTTTTTCGTGC+TGG | + | chr7_3:52713771-52713790 | Msa1109230:CDS | 45.0% |
| !!! | TCGGGATGTTTTTTCGTGCT+GGG | + | chr7_3:52713772-52713791 | Msa1109230:CDS | 45.0% |
| GGGGAAAGACCTAAATGGAT+GGG | + | chr7_3:52714051-52714070 | Msa1109230:CDS | 45.0% | |
| AAGACCTAAATGGATGGGAG+AGG | + | chr7_3:52714056-52714075 | Msa1109230:CDS | 45.0% | |
| AACAAGACTAATCGGGGTTC+GGG | + | chr7_3:52714141-52714160 | Msa1109230:CDS | 45.0% | |
| CCAAGAAGAGTTCATCAGGA+TGG | - | chr7_3:52714338-52714357 | None:intergenic | 45.0% | |
| CCATCCTGATGAACTCTTCT+TGG | + | chr7_3:52714335-52714354 | Msa1109230:CDS | 45.0% | |
| GTAGCCAAGAAGAGTTCATC+AGG | - | chr7_3:52714342-52714361 | None:intergenic | 45.0% | |
| TCTTCTTGGCTACTCGTAAG+AGG | + | chr7_3:52714349-52714368 | Msa1109230:CDS | 45.0% | |
| TAAGAGGAAGTCTGGCGATT+GGG | + | chr7_3:52714365-52714384 | Msa1109230:CDS | 45.0% | |
| TTATGGGTAGATGTTGCTGG+GGG | + | chr7_3:52714999-52715018 | Msa1109230:CDS | 45.0% | |
| TGAGTCAGATGACTTACACC+TGG | - | chr7_3:52715077-52715096 | None:intergenic | 45.0% | |
| !!! | TTTTTTTATTATCTATTTTA+AGG | + | chr7_3:52712327-52712346 | Msa1109230:intron | 5.0% |
| ! | GACCGAGTCAAAATTGGCCT+TGG | + | chr7_3:52711080-52711099 | Msa1109230:intron | 50.0% |
| !!! | CCCCAAGGCCAATTTTGACT+CGG | - | chr7_3:52711085-52711104 | None:intergenic | 50.0% |
| !! | CCGAGTCAAAATTGGCCTTG+GGG | + | chr7_3:52711082-52711101 | Msa1109230:intron | 50.0% |
| !! | CGAGTCAAAATTGGCCTTGG+GGG | + | chr7_3:52711083-52711102 | Msa1109230:intron | 50.0% |
| !! | GTTGCGATTTTGGCCCCTTA+AGG | - | chr7_3:52711159-52711178 | None:intergenic | 50.0% |
| AGGGGCCAAAATCGCAACTT+TGG | + | chr7_3:52711161-52711180 | Msa1109230:intron | 50.0% | |
| GGGGCCAAAATCGCAACTTT+GGG | + | chr7_3:52711162-52711181 | Msa1109230:intron | 50.0% | |
| ! | GCAACTTTGGGAAAGTTCGG+AGG | + | chr7_3:52711174-52711193 | Msa1109230:intron | 50.0% |
| GCTAGGTAGTTCGAGTACTC+CGG | + | chr7_3:52712523-52712542 | Msa1109230:intron | 50.0% | |
| !!! | CGGCGTGCTTATTTTACGAG+TGG | + | chr7_3:52712543-52712562 | Msa1109230:intron | 50.0% |
| CACCTAGAGATTGCCTCTTG+AGG | + | chr7_3:52712573-52712592 | Msa1109230:intron | 50.0% | |
| CAGACTCGCGAAACACCAAA+GGG | - | chr7_3:52712613-52712632 | None:intergenic | 50.0% | |
| ACAGACTCGCGAAACACCAA+AGG | - | chr7_3:52712614-52712633 | None:intergenic | 50.0% | |
| ! | TTGGTGTTTCGCGAGTCTGT+CGG | + | chr7_3:52712614-52712633 | Msa1109230:intron | 50.0% |
| !! | TTTCGCGAGTCTGTCGGTTT+GGG | + | chr7_3:52712620-52712639 | Msa1109230:intron | 50.0% |
| ! | CCTGCTGTGCAGTGTTTTCT+GGG | + | chr7_3:52712706-52712725 | Msa1109230:intron | 50.0% |
| !!! | TTCTGGGACTGTTTTGGCAG+GGG | + | chr7_3:52712722-52712741 | Msa1109230:intron | 50.0% |
| TTGTGTTTGGTTGTGGGAGG+TGG | + | chr7_3:52712772-52712791 | Msa1109230:intron | 50.0% | |
| TGTGTTTGGTTGTGGGAGGT+GGG | + | chr7_3:52712773-52712792 | Msa1109230:intron | 50.0% | |
| !!! | TTTTTTTCGGCGCGTCTCGT+TGG | - | chr7_3:52713237-52713256 | None:intergenic | 50.0% |
| GAGACGCGCCGAAAAAAACT+AGG | + | chr7_3:52713239-52713258 | Msa1109230:CDS | 50.0% | |
| !! | AGTTCTTTAGGTTGGACGGC+TGG | - | chr7_3:52713356-52713375 | None:intergenic | 50.0% |
| ACTTGAGAAGGTAGGACCAC+TGG | - | chr7_3:52713467-52713486 | None:intergenic | 50.0% | |
| GTGCAGTCACTTGAGAAGGT+AGG | - | chr7_3:52713475-52713494 | None:intergenic | 50.0% | |
| ACCTTCTCAAGTGACTGCAC+CGG | + | chr7_3:52713475-52713494 | Msa1109230:CDS | 50.0% | |
| TCAAGGGAAGGTAGTGATGC+CGG | - | chr7_3:52713497-52713516 | None:intergenic | 50.0% | |
| ATCACTACCTTCCCTTGAGG+AGG | + | chr7_3:52713499-52713518 | Msa1109230:CDS | 50.0% | |
| TGATCATCCTCCTCAAGGGA+AGG | - | chr7_3:52713509-52713528 | None:intergenic | 50.0% | |
| GCAGATGATCATCCTCCTCA+AGG | - | chr7_3:52713514-52713533 | None:intergenic | 50.0% | |
| GAGGAGGATGATCATCTGCA+AGG | + | chr7_3:52713515-52713534 | Msa1109230:CDS | 50.0% | |
| TGATCATCTGCAAGGTGTGC+AGG | + | chr7_3:52713523-52713542 | Msa1109230:CDS | 50.0% | |
| GATCATCTGCAAGGTGTGCA+GGG | + | chr7_3:52713524-52713543 | Msa1109230:CDS | 50.0% | |
| TTTCTTAGGGGCCTCTTGCT+CGG | - | chr7_3:52713564-52713583 | None:intergenic | 50.0% | |
| ! | ACTGTGGTGCCTTGTTCCTT+TGG | + | chr7_3:52713873-52713892 | Msa1109230:intron | 50.0% |
| CTGCAGTAGCCAAAGGAACA+AGG | - | chr7_3:52713885-52713904 | None:intergenic | 50.0% | |
| ! | GCATGTCAGTAAGGCGCTTT+GGG | - | chr7_3:52714011-52714030 | None:intergenic | 50.0% |
| ! | AGCATGTCAGTAAGGCGCTT+TGG | - | chr7_3:52714012-52714031 | None:intergenic | 50.0% |
| GGGGGAAAGACCTAAATGGA+TGG | + | chr7_3:52714050-52714069 | Msa1109230:intron | 50.0% | |
| GCATCCTCTCCCATCCATTT+AGG | - | chr7_3:52714063-52714082 | None:intergenic | 50.0% | |
| ATGGGAGAGGATGCATATGC+TGG | + | chr7_3:52714069-52714088 | Msa1109230:CDS | 50.0% | |
| TGTCCATACCACAGGTCGTA+AGG | + | chr7_3:52714176-52714195 | Msa1109230:CDS | 50.0% | |
| GCTACTCGTAAGAGGAAGTC+TGG | + | chr7_3:52714357-52714376 | Msa1109230:CDS | 50.0% | |
| GTAAGAGGAAGTCTGGCGAT+TGG | + | chr7_3:52714364-52714383 | Msa1109230:CDS | 50.0% | |
| GATCAGCTTCAGCAGCTCTT+TGG | - | chr7_3:52715184-52715203 | None:intergenic | 50.0% | |
| ! | GGAAGAATTCAGGAAGCGCA+TGG | + | chr7_3:52715244-52715263 | Msa1109230:CDS | 50.0% |
| GGGGGCCAAAATCGCAACTT+TGG | - | chr7_3:52710935-52710954 | None:intergenic | 55.0% | |
| TGACACGTGGCACCTCACTT+AGG | + | chr7_3:52711041-52711060 | Msa1109230:intron | 55.0% | |
| GACACGTGGCACCTCACTTA+GGG | + | chr7_3:52711042-52711061 | Msa1109230:intron | 55.0% | |
| !! | TATGGCAGTTTTGGCCCCCA+AGG | - | chr7_3:52711100-52711119 | None:intergenic | 55.0% |
| TGGCACTGCCTTACCTCAAG+AGG | - | chr7_3:52712589-52712608 | None:intergenic | 55.0% | |
| ! | GTTTCGCGAGTCTGTCGGTT+TGG | + | chr7_3:52712619-52712638 | Msa1109230:intron | 55.0% |
| !! | TTCGCGAGTCTGTCGGTTTG+GGG | + | chr7_3:52712621-52712640 | Msa1109230:intron | 55.0% |
| GCTCGGTTATGACTGCTGTC+AGG | + | chr7_3:52712653-52712672 | Msa1109230:intron | 55.0% | |
| ! | GCCTGCTGTGCAGTGTTTTC+TGG | + | chr7_3:52712705-52712724 | Msa1109230:intron | 55.0% |
| CCCAGAAAACACTGCACAGC+AGG | - | chr7_3:52712709-52712728 | None:intergenic | 55.0% | |
| GTGTTTGGTTGTGGGAGGTG+GGG | + | chr7_3:52712774-52712793 | Msa1109230:intron | 55.0% | |
| TGTTTGGTTGTGGGAGGTGG+GGG | + | chr7_3:52712775-52712794 | Msa1109230:intron | 55.0% | |
| !! | TTTAGGTTGGACGGCTGGTC+GGG | - | chr7_3:52713351-52713370 | None:intergenic | 55.0% |
| !! | CTTTAGGTTGGACGGCTGGT+CGG | - | chr7_3:52713352-52713371 | None:intergenic | 55.0% |
| ! | AGATCAGTAGGTTGGACGGC+TGG | - | chr7_3:52713419-52713438 | None:intergenic | 55.0% |
| GGCATCACTACCTTCCCTTG+AGG | + | chr7_3:52713496-52713515 | Msa1109230:CDS | 55.0% | |
| ACTAATCGGGGTTCGGGCAA+AGG | + | chr7_3:52714147-52714166 | Msa1109230:CDS | 55.0% | |
| GAGCCTTACGACCTGTGGTA+TGG | - | chr7_3:52714182-52714201 | None:intergenic | 55.0% | |
| !! | GATTGGGTTGACAGTCGTGC+TGG | + | chr7_3:52714381-52714400 | Msa1109230:CDS | 55.0% |
| GGTGATATGCAAGAGGTGGG+CGG | + | chr7_3:52714960-52714979 | Msa1109230:CDS | 55.0% | |
| CTGACGTGGCACCCTAAGTG+AGG | - | chr7_3:52711056-52711075 | None:intergenic | 60.0% | |
| !! | TGACTCGGTCTACGCTGACG+TGG | - | chr7_3:52711070-52711089 | None:intergenic | 60.0% |
| GTAAGGCAGTGCCAGCCCTT+TGG | + | chr7_3:52712595-52712614 | Msa1109230:intron | 60.0% | |
| CTCGCGAAACACCAAAGGGC+TGG | - | chr7_3:52712609-52712628 | None:intergenic | 60.0% | |
| !! | TCGCGAGTCTGTCGGTTTGG+GGG | + | chr7_3:52712622-52712641 | Msa1109230:intron | 60.0% |
| GGAGGTGGGGGCTAAGCTAT+GGG | + | chr7_3:52712787-52712806 | Msa1109230:intron | 60.0% | |
| ! | GTTGGTGAGGTGGGCTCAAC+TGG | - | chr7_3:52713275-52713294 | None:intergenic | 60.0% |
| !! | TTAGGTTGGACGGCTGGTCG+GGG | - | chr7_3:52713350-52713369 | None:intergenic | 60.0% |
| ! | AGTAGGTTGGACGGCTGGTC+GGG | - | chr7_3:52713414-52713433 | None:intergenic | 60.0% |
| ! | CAGTAGGTTGGACGGCTGGT+CGG | - | chr7_3:52713415-52713434 | None:intergenic | 60.0% |
| !! | GTAGGACCACTGGTGCTGGT+GGG | - | chr7_3:52713457-52713476 | None:intergenic | 60.0% |
| GAAGGTAGGACCACTGGTGC+TGG | - | chr7_3:52713461-52713480 | None:intergenic | 60.0% | |
| GCCGGTGCAGTCACTTGAGA+AGG | - | chr7_3:52713479-52713498 | None:intergenic | 60.0% | |
| AATCGGGGTTCGGGCAAAGG+AGG | + | chr7_3:52714150-52714169 | Msa1109230:CDS | 60.0% | |
| GGAGGAGCTGTCCATACCAC+AGG | + | chr7_3:52714168-52714187 | Msa1109230:CDS | 60.0% | |
| GTGGTGAGCCTTACGACCTG+TGG | - | chr7_3:52714187-52714206 | None:intergenic | 60.0% | |
| TCGTAAGGCTCACCACGACG+TGG | + | chr7_3:52714191-52714210 | Msa1109230:CDS | 60.0% | |
| CCATGTCTAGTGCCACGTCG+TGG | - | chr7_3:52714206-52714225 | None:intergenic | 60.0% | |
| CCACGACGTGGCACTAGACA+TGG | + | chr7_3:52714203-52714222 | Msa1109230:CDS | 60.0% | |
| GTTGCTGGGGGTTTGTCTCG+AGG | + | chr7_3:52715011-52715030 | Msa1109230:CDS | 60.0% | |
| !! | CGCGAGTCTGTCGGTTTGGG+GGG | + | chr7_3:52712623-52712642 | Msa1109230:intron | 65.0% |
| !! | TGTCGGTTTGGGGGGTCTGC+TGG | + | chr7_3:52712631-52712650 | Msa1109230:intron | 65.0% |
| ! | GTTTGGGGGGTCTGCTGGCT+CGG | + | chr7_3:52712636-52712655 | Msa1109230:intron | 65.0% |
| GGGAGGTGGGGGCTAAGCTA+TGG | + | chr7_3:52712786-52712805 | Msa1109230:intron | 65.0% | |
| ! | GGGAAGTGGGATGGCTGGTC+GGG | - | chr7_3:52713330-52713349 | None:intergenic | 65.0% |
| GGGGAAGTGGGATGGCTGGT+CGG | - | chr7_3:52713331-52713350 | None:intergenic | 65.0% | |
| ! | GGGAGGTTGGATGGCTGGTC+GGG | - | chr7_3:52713393-52713412 | None:intergenic | 65.0% |
| GGGGAGGTTGGATGGCTGGT+CGG | - | chr7_3:52713394-52713413 | None:intergenic | 65.0% | |
| ! | GTAGGTTGGACGGCTGGTCG+GGG | - | chr7_3:52713413-52713432 | None:intergenic | 65.0% |
| !! | CTGGTGCTGGTGGGTCAGGT+TGG | - | chr7_3:52713448-52713467 | None:intergenic | 65.0% |
| ACCTGACCCACCAGCACCAG+TGG | + | chr7_3:52713448-52713467 | Msa1109230:CDS | 65.0% | |
| !! | ACCACTGGTGCTGGTGGGTC+AGG | - | chr7_3:52713452-52713471 | None:intergenic | 65.0% |
| ! | GGTAGGACCACTGGTGCTGG+TGG | - | chr7_3:52713458-52713477 | None:intergenic | 65.0% |
| ! | GAGGTGGGCTCAACTGGCCG+TGG | - | chr7_3:52713269-52713288 | None:intergenic | 70.0% |
| ! | GGATGGCTGGTCGGGCAGGT+TGG | - | chr7_3:52713322-52713341 | None:intergenic | 70.0% |
| ! | AGTGGGATGGCTGGTCGGGC+AGG | - | chr7_3:52713326-52713345 | None:intergenic | 70.0% |
| GGTCGGGGAAGTGGGATGGC+TGG | - | chr7_3:52713335-52713354 | None:intergenic | 70.0% | |
| ! | GGCTGGTCGGGGAAGTGGGA+TGG | - | chr7_3:52713339-52713358 | None:intergenic | 70.0% |
| ! | GGACGGCTGGTCGGGGAAGT+GGG | - | chr7_3:52713343-52713362 | None:intergenic | 70.0% |
| ! | TGGACGGCTGGTCGGGGAAG+TGG | - | chr7_3:52713344-52713363 | None:intergenic | 70.0% |
| ! | GGATGGCTGGTCGGGCAGGT+TGG | - | chr7_3:52713322-52713341 | None:intergenic | 70.0% |
| ! | GGTTGGATGGCTGGTCGGGC+AGG | - | chr7_3:52713389-52713408 | None:intergenic | 70.0% |
| GGTCGGGGAGGTTGGATGGC+TGG | - | chr7_3:52713398-52713417 | None:intergenic | 70.0% | |
| ! | GGCTGGTCGGGGAGGTTGGA+TGG | - | chr7_3:52713402-52713421 | None:intergenic | 70.0% |
| GGCTGCAGCAGCACGTGCTG+AGG | + | chr7_3:52715145-52715164 | Msa1109230:CDS | 70.0% | |
| ! | GGACGGCTGGTCGGGGAGGT+TGG | - | chr7_3:52713406-52713425 | None:intergenic | 75.0% |
| ! | GGTTGGACGGCTGGTCGGGG+AGG | - | chr7_3:52713347-52713366 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_3 | gene | 52710564 | 52715667 | 52710564 | ID=Msa1109230;Name=Msa1109230 |
| chr7_3 | mRNA | 52710564 | 52715667 | 52710564 | ID=Msa1109230-mRNA-1;Parent=Msa1109230;Name=Msa1109230-mRNA-1;_AED=0.05;_eAED=0.05;_QI=16|0.57|0.37|0.75|0.85|0.87|8|285|487 |
| chr7_3 | exon | 52710564 | 52710569 | 52710564 | ID=Msa1109230-mRNA-1:exon:11072;Parent=Msa1109230-mRNA-1 |
| chr7_3 | exon | 52712349 | 52712355 | 52712349 | ID=Msa1109230-mRNA-1:exon:11073;Parent=Msa1109230-mRNA-1 |
| chr7_3 | exon | 52713122 | 52713624 | 52713122 | ID=Msa1109230-mRNA-1:exon:11074;Parent=Msa1109230-mRNA-1 |
| chr7_3 | exon | 52713715 | 52713832 | 52713715 | ID=Msa1109230-mRNA-1:exon:11075;Parent=Msa1109230-mRNA-1 |
| chr7_3 | exon | 52713946 | 52714038 | 52713946 | ID=Msa1109230-mRNA-1:exon:11076;Parent=Msa1109230-mRNA-1 |
| chr7_3 | exon | 52714051 | 52714224 | 52714051 | ID=Msa1109230-mRNA-1:exon:11077;Parent=Msa1109230-mRNA-1 |
| chr7_3 | exon | 52714312 | 52714413 | 52714312 | ID=Msa1109230-mRNA-1:exon:11078;Parent=Msa1109230-mRNA-1 |
| chr7_3 | exon | 52714906 | 52715667 | 52714906 | ID=Msa1109230-mRNA-1:exon:11079;Parent=Msa1109230-mRNA-1 |
| chr7_3 | five_prime_UTR | 52710564 | 52710569 | 52710564 | ID=Msa1109230-mRNA-1:five_prime_utr;Parent=Msa1109230-mRNA-1 |
| chr7_3 | five_prime_UTR | 52712349 | 52712355 | 52712349 | ID=Msa1109230-mRNA-1:five_prime_utr;Parent=Msa1109230-mRNA-1 |
| chr7_3 | five_prime_UTR | 52713122 | 52713124 | 52713122 | ID=Msa1109230-mRNA-1:five_prime_utr;Parent=Msa1109230-mRNA-1 |
| chr7_3 | CDS | 52713125 | 52713624 | 52713125 | ID=Msa1109230-mRNA-1:cds;Parent=Msa1109230-mRNA-1 |
| chr7_3 | CDS | 52713715 | 52713832 | 52713715 | ID=Msa1109230-mRNA-1:cds;Parent=Msa1109230-mRNA-1 |
| chr7_3 | CDS | 52713946 | 52714038 | 52713946 | ID=Msa1109230-mRNA-1:cds;Parent=Msa1109230-mRNA-1 |
| chr7_3 | CDS | 52714051 | 52714224 | 52714051 | ID=Msa1109230-mRNA-1:cds;Parent=Msa1109230-mRNA-1 |
| chr7_3 | CDS | 52714312 | 52714413 | 52714312 | ID=Msa1109230-mRNA-1:cds;Parent=Msa1109230-mRNA-1 |
| chr7_3 | CDS | 52714906 | 52715382 | 52714906 | ID=Msa1109230-mRNA-1:cds;Parent=Msa1109230-mRNA-1 |
| chr7_3 | three_prime_UTR | 52715383 | 52715667 | 52715383 | ID=Msa1109230-mRNA-1:three_prime_utr;Parent=Msa1109230-mRNA-1 |
| Gene Sequence |
| Protein sequence |
