AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0970070

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970070 MtrunA17_Chr6g0448931 98.588 779 8 3 1 778 1 777 0.0 1575
Msa0970070 MtrunA17_Chr2g0281181 35.238 210 126 6 269 474 106 309 1.26e-27 117
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970070 AT5G23450.2 70.221 769 202 15 19 774 2 756 0.0 1053
Msa0970070 AT5G23450.1 70.221 769 202 15 19 774 2 756 0.0 1053
Msa0970070 AT5G23450.5 70.221 769 202 15 19 774 2 756 0.0 1053
Msa0970070 AT5G23450.4 69.948 772 205 15 19 777 2 759 0.0 1052
Msa0970070 AT5G23450.3 68.878 784 202 16 19 774 2 771 0.0 1043
Msa0970070 AT4G21540.3 35.514 214 122 6 269 475 118 322 5.60e-34 135
Msa0970070 AT4G21540.1 35.514 214 122 6 269 475 118 322 2.70e-33 135
Msa0970070 AT4G21534.1 34.286 210 128 6 269 474 113 316 2.76e-30 125
Msa0970070 AT4G21534.2 34.286 210 128 6 269 474 113 316 2.76e-30 125

Find 242 sgRNAs with CRISPR-Local

Find 591 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TACAGTTGATGCAAGGTTTC+TGG 0.162471 6_4:-1534229 None:intergenic
TTAGAGGTTGGGGATTAATT+AGG 0.177233 6_4:-1532517 None:intergenic
TCGGATTGGATCTATGTAAT+TGG 0.214793 6_4:-1532440 None:intergenic
TTCAATTCTTTGACGGGTTT+TGG 0.227448 6_4:+1540075 Msa0970070:three_prime_UTR
CCACACATGATACCTCTAAA+TGG 0.235011 6_4:+1539102 Msa0970070:CDS
GGATTAACAGTCTCATATTA+TGG 0.250330 6_4:+1537888 Msa0970070:CDS
GGGACAGTTTGTTGGCATTC+TGG 0.252199 6_4:+1539328 Msa0970070:CDS
TTCCGATGATGCTTGCTTCT+TGG 0.252763 6_4:-1533672 None:intergenic
TTAGCCTCTGGATCCCATTT+TGG 0.265363 6_4:-1539197 None:intergenic
TTTAAAATTACAAGCATCTT+AGG 0.265926 6_4:-1533746 None:intergenic
GATGAGAAATCTGATTTGTT+AGG 0.276033 6_4:+1532869 Msa0970070:CDS
TTACATCTAAAGAGCAATTC+AGG 0.284423 6_4:-1533716 None:intergenic
TGTCTGACCCAGGTCCTATC+TGG 0.284553 6_4:+1539165 Msa0970070:CDS
AATGGGATCCAGAGGCTAAT+TGG 0.284879 6_4:+1539201 Msa0970070:CDS
CTTGACTTAGATCTCGTTCT+TGG 0.292964 6_4:-1539050 None:intergenic
CCTGAACAGTGCAGGCTTAT+TGG 0.297064 6_4:+1540021 Msa0970070:CDS
GTTTATTTGTAGGTTGTTAA+TGG 0.306506 6_4:+1536666 Msa0970070:intron
CGCTGCATTTCCCCATTTAG+AGG 0.312586 6_4:-1539114 None:intergenic
CGATCATCACTTCTCTTCTC+TGG 0.313253 6_4:+1532331 Msa0970070:five_prime_UTR
TTTCTCTGGCAAATTGGCTT+TGG 0.316362 6_4:+1532901 Msa0970070:CDS
AACAAGTAAAGCTTTACTTT+GGG 0.317747 6_4:+1533024 Msa0970070:CDS
TAGAGGTTGGGGATTAATTA+GGG 0.325725 6_4:-1532516 None:intergenic
TCTGGGATGCTGAACCAAAA+TGG 0.333637 6_4:+1539183 Msa0970070:CDS
AAGGAGGCTGTGCCTCGTTT+TGG 0.338296 6_4:+1539284 Msa0970070:CDS
AAAGAAAGAGTGGGTGGGTT+TGG 0.338636 6_4:+1532200 Msa0970070:five_prime_UTR
CATCATGACCAGATCAAATA+AGG 0.341585 6_4:+1538794 Msa0970070:CDS
TAACAAGTAAAGCTTTACTT+TGG 0.343655 6_4:+1533023 Msa0970070:CDS
ATCGAATTAAATTAGAGGTT+GGG 0.346062 6_4:-1532528 None:intergenic
GTGTAACATACCTTGAATAT+TGG 0.348243 6_4:-1533821 None:intergenic
GGTGGCCCTGGCAACTCAAT+AGG 0.352807 6_4:-1539236 None:intergenic
TTATCGTCATGCTCAGCTTT+GGG 0.356426 6_4:-1539398 None:intergenic
AAATGATCAATTCGAGGAAA+TGG 0.359002 6_4:-1540309 None:intergenic
ATAACATCGAATTAAATTAG+AGG 0.359895 6_4:-1532533 None:intergenic
CCAATAAGCCTGCACTGTTC+AGG 0.365157 6_4:-1540021 None:intergenic
CAACAGTCCTTCAGACGATT+AGG 0.366825 6_4:+1532662 Msa0970070:CDS
GTTATCGTCATGCTCAGCTT+TGG 0.368259 6_4:-1539399 None:intergenic
GATCTCGTTCTTGGCCAGTT+TGG 0.375903 6_4:-1539041 None:intergenic
GAAGGAATATCTATACCTAT+TGG 0.380273 6_4:+1536714 Msa0970070:CDS
ATCTGATTTGTTAGGGTATG+TGG 0.384335 6_4:+1532877 Msa0970070:CDS
TTAATACTTCGACAGCTTGC+TGG 0.385519 6_4:+1534165 Msa0970070:intron
CGGATTGGATCTATGTAATT+GGG 0.386792 6_4:-1532439 None:intergenic
CATCCCATCCTTATTTGATC+TGG 0.389666 6_4:-1538802 None:intergenic
CACACATGATACCTCTAAAT+GGG 0.392461 6_4:+1539103 Msa0970070:CDS
TCATCAAACTATCCAACCTT+TGG 0.393421 6_4:+1532401 Msa0970070:five_prime_UTR
CTTTGCTTCCTGAACAGTGC+AGG 0.393946 6_4:+1540013 Msa0970070:CDS
ATGACTCCGAGTCGGATATC+TGG 0.396063 6_4:+1538861 Msa0970070:CDS
CAGATGTCTTTGCTGTTGAA+TGG 0.398921 6_4:+1537841 Msa0970070:CDS
GCACTCGTATCCGATGAAAA+AGG 0.400248 6_4:+1533496 Msa0970070:CDS
TAGTACTACCAGTAGAATTA+CGG 0.403875 6_4:-1532592 None:intergenic
TCACCGGAACCTTCTTTCTC+AGG 0.410815 6_4:-1538735 None:intergenic
CTCTGTCAACAACTCCAAAC+TGG 0.411086 6_4:+1539027 Msa0970070:CDS
ATAGCCATTGCTGCAGAAAC+AGG 0.413815 6_4:-1536795 None:intergenic
ATGGGATCCAGAGGCTAATT+GGG 0.415815 6_4:+1539202 Msa0970070:CDS
CAGAATAATAAAATTCACTT+TGG 0.417697 6_4:+1537867 Msa0970070:CDS
AGCATCCAGTGGTGATCATC+AGG 0.420992 6_4:+1532793 Msa0970070:CDS
AAGTCAAAACGCCTATCATC+TGG 0.421868 6_4:+1538957 Msa0970070:CDS
TCACTGGTATGGACTGTTCT+TGG 0.423319 6_4:+1536762 Msa0970070:CDS
CTGGGATGCTGAACCAAAAT+GGG 0.431626 6_4:+1539184 Msa0970070:CDS
TAGAACTGTCCAGGGCTCTC+AGG 0.431927 6_4:+1539367 Msa0970070:CDS
AGCATCGACAGCAGCTTGAT+TGG 0.438177 6_4:-1532996 None:intergenic
ATCATATGTGTTGGCGGTGA+TGG 0.438311 6_4:+1534678 Msa0970070:CDS
AAATCCTTGCGACTCCTTCG+AGG 0.439009 6_4:-1533548 None:intergenic
TTTGGTTCAGCATCCCAGAT+AGG 0.444737 6_4:-1539179 None:intergenic
CATCGAATTAAATTAGAGGT+TGG 0.447938 6_4:-1532529 None:intergenic
AAATCTGTCAGAATAAAGTC+TGG 0.451607 6_4:+1539922 Msa0970070:CDS
ACCTTCACATATTCAACATA+TGG 0.453058 6_4:-1539512 None:intergenic
GACAAATGGGTTGTTTCAAA+GGG 0.455581 6_4:+1539308 Msa0970070:CDS
TCCACATCCCAATTAGCCTC+TGG 0.456302 6_4:-1539209 None:intergenic
AGTACTACCAGTAGAATTAC+GGG 0.458624 6_4:-1532591 None:intergenic
TCGAATTAAATTAGAGGTTG+GGG 0.462146 6_4:-1532527 None:intergenic
GATCGATCCAACTCAACAAT+GGG 0.463015 6_4:-1532131 None:intergenic
AAACGCAGCAAACTCAAGTC+TGG 0.463117 6_4:+1532743 Msa0970070:CDS
AGTTGTGGATGAATGACTTC+TGG 0.464226 6_4:-1539002 None:intergenic
ATGAGAAATCTGATTTGTTA+GGG 0.465209 6_4:+1532870 Msa0970070:CDS
CCAGCTGGTATAATTCCAAT+AGG 0.466729 6_4:-1536729 None:intergenic
CCATGCTTGTAGAACTGTCC+AGG 0.471697 6_4:+1539358 Msa0970070:CDS
GTCTGACCCAGGTCCTATCT+GGG 0.471987 6_4:+1539166 Msa0970070:CDS
TGGGGATTAATTAGGGTTTG+AGG 0.475419 6_4:-1532509 None:intergenic
AAACACACTCACAGCGGATG+TGG 0.476160 6_4:+1539946 Msa0970070:CDS
GCTTCTTGGAAGAAACTAAA+GGG 0.477248 6_4:-1533658 None:intergenic
GTTTCAAAGGGACAGTTTGT+TGG 0.477445 6_4:+1539320 Msa0970070:CDS
TCTGTATCATCCGGTGGCCC+TGG 0.478633 6_4:-1539248 None:intergenic
ATCTGCCGCATCAGCAGCCG+CGG 0.479710 6_4:+1532619 Msa0970070:CDS
AAACCTGAGAAAGAAGGTTC+CGG 0.482388 6_4:+1538732 Msa0970070:CDS
AGACAAATGGGTTGTTTCAA+AGG 0.484064 6_4:+1539307 Msa0970070:CDS
TGCTTCTTGGAAGAAACTAA+AGG 0.485732 6_4:-1533659 None:intergenic
TATTGAGTTGCCAGGGCCAC+CGG 0.489083 6_4:+1539238 Msa0970070:CDS
AAACAGGTTTCTTATCATGC+TGG 0.490756 6_4:+1533455 Msa0970070:intron
TTGGGTATCTGAATTCATAA+AGG 0.494926 6_4:-1540116 None:intergenic
GAAAACCCTATTGAGTTGCC+AGG 0.495102 6_4:+1539230 Msa0970070:CDS
AGTCTTTCCCGTAATTCTAC+TGG 0.496187 6_4:+1532584 Msa0970070:CDS
CTAGATTTGATCATGGTACA+TGG 0.499088 6_4:+1539425 Msa0970070:CDS
CACAGCGGATGTGGGATTGA+TGG 0.500254 6_4:+1539955 Msa0970070:CDS
GTGGCCCTGGCAACTCAATA+GGG 0.503226 6_4:-1539235 None:intergenic
CTCAAAATTCTTTGCTGCAG+CGG 0.504481 6_4:-1532819 None:intergenic
CTTTCAGGAATCATATGTGT+TGG 0.505224 6_4:+1534669 Msa0970070:intron
AGAAAGAAGGTTCCGGTGAA+AGG 0.508854 6_4:+1538739 Msa0970070:CDS
GAGTGCTACTACAGGTATCC+AGG 0.509116 6_4:-1538890 None:intergenic
AATTGAATTGAATTGAATTG+AGG 0.509333 6_4:-1532479 None:intergenic
TCTAAGTCAAGGAATGATAG+AGG 0.513275 6_4:+1539062 Msa0970070:CDS
ACTTGAAAGACTAGATGCCC+TGG 0.513828 6_4:-1538826 None:intergenic
TTCCAAGAAGCAAGCATCAT+CGG 0.514475 6_4:+1533670 Msa0970070:CDS
CGATGTGGAACCAATATTCA+AGG 0.514817 6_4:+1533811 Msa0970070:CDS
TGTTCTCAATTATCAACTGC+TGG 0.515198 6_4:+1532689 Msa0970070:CDS
GACATCAGCACTTGCCCTGA+TGG 0.515298 6_4:+1534252 Msa0970070:CDS
TCGGATATCTGGTGGAGACC+TGG 0.516183 6_4:+1538872 Msa0970070:CDS
GAGGCAATTCAGTGGGTTGG+TGG 0.516882 6_4:+1533596 Msa0970070:CDS
GGTATTTGACAAGACAGATT+GGG 0.517518 6_4:-1540134 None:intergenic
GTCAACTACTTCCCTTTCAC+CGG 0.518145 6_4:-1538751 None:intergenic
CAAATAAGGATGGGATGCCC+AGG 0.518220 6_4:+1538808 Msa0970070:CDS
ACGAGGCACAGCCTCCTTCG+TGG 0.521294 6_4:-1539279 None:intergenic
AGGAATGATAGAGGATGGGC+TGG 0.524338 6_4:+1539071 Msa0970070:CDS
CCTATTGGAATTATACCAGC+TGG 0.524555 6_4:+1536729 Msa0970070:CDS
AGGTATTTGACAAGACAGAT+TGG 0.526023 6_4:-1540135 None:intergenic
AGAATCAAATGATCAATTCG+AGG 0.528268 6_4:-1540315 None:intergenic
AACGACCTCTGCCTGAGCGT+GGG 0.530741 6_4:-1533769 None:intergenic
AGTCAAGGAATGATAGAGGA+TGG 0.531015 6_4:+1539066 Msa0970070:CDS
TTAAACCCACGCTCAGGCAG+AGG 0.537549 6_4:+1533764 Msa0970070:CDS
GAAATTACTTGTCCATTGAG+TGG 0.537790 6_4:-1539988 None:intergenic
ATTTGATCTGGTCATGATGT+CGG 0.538679 6_4:-1538790 None:intergenic
TCACCTTGACGATGTTATCT+CGG 0.540805 6_4:+1533060 Msa0970070:CDS
CAAAGACATCTGTAGCAGTA+AGG 0.542508 6_4:-1537830 None:intergenic
TTTAGAACCTCAGATCGGAT+TGG 0.544513 6_4:-1532454 None:intergenic
TATTGCTCCTTCCAGATGAT+AGG 0.545650 6_4:-1538968 None:intergenic
TCAGGAATCATATGTGTTGG+CGG 0.546261 6_4:+1534672 Msa0970070:intron
GAAAGAAGGTTCCGGTGAAA+GGG 0.546546 6_4:+1538740 Msa0970070:CDS
ATGACCAGATCAAATAAGGA+TGG 0.547902 6_4:+1538798 Msa0970070:CDS
ATCACCACTGGATGCTCGAA+TGG 0.547921 6_4:-1532786 None:intergenic
GATCCTACTTCTGTATCATC+CGG 0.548105 6_4:-1539257 None:intergenic
TCATATGTGTTGGCGGTGAT+GGG 0.548132 6_4:+1534679 Msa0970070:CDS
GAAGAGGCAATTCAGTGGGT+TGG 0.548246 6_4:+1533593 Msa0970070:CDS
TCAGCATCCCAGATAGGACC+TGG 0.549296 6_4:-1539173 None:intergenic
GTTCTGATAACTCACTGGTA+TGG 0.550163 6_4:+1536751 Msa0970070:CDS
CAAAGGTTAGAAAGAAAGAG+TGG 0.550884 6_4:+1532190 Msa0970070:five_prime_UTR
GAGCAACCACCTGAGAGCCC+TGG 0.551598 6_4:-1539376 None:intergenic
GGTGAGTCCCATTGTTGAGT+TGG 0.557484 6_4:+1532124 Msa0970070:five_prime_UTR
GCATCAAAACCTGAGAAAGA+AGG 0.558860 6_4:+1538726 Msa0970070:CDS
TGCAGCAATGGCTATTGTGA+AGG 0.560209 6_4:+1536803 Msa0970070:CDS
AGATCCTGTTTCTGCAGCAA+TGG 0.561379 6_4:+1536791 Msa0970070:CDS
GTAGTTAAAACAACATCTGC+TGG 0.561482 6_4:+1534201 Msa0970070:CDS
AACTGTCCAGGGCTCTCAGG+TGG 0.564531 6_4:+1539370 Msa0970070:CDS
CGATCGATCCAACTCAACAA+TGG 0.564788 6_4:-1532132 None:intergenic
GAATGAATGAATGACGGCAA+AGG 0.567509 6_4:+1532096 Msa0970070:five_prime_UTR
CCACCGGATGATACAGAAGT+AGG 0.568000 6_4:+1539254 Msa0970070:CDS
ACAAGTAAAGCTTTACTTTG+GGG 0.568070 6_4:+1533025 Msa0970070:CDS
TCAACTTCGTAGCTGTATCT+CGG 0.568314 6_4:-1538693 None:intergenic
TCCAGAGGCTAATTGGGATG+TGG 0.568922 6_4:+1539208 Msa0970070:CDS
TGTGGCTTCTACAATAGAAG+AGG 0.571463 6_4:+1533577 Msa0970070:CDS
ATCTGAATTCATAAAGGAGA+AGG 0.572047 6_4:-1540110 None:intergenic
TTGGAAGAAACTAAAGGGTG+AGG 0.574155 6_4:-1533653 None:intergenic
GAGTGCCGCGGCTGCTGATG+CGG 0.576566 6_4:-1532624 None:intergenic
ACTTAGTAGAGACAATCAAA+AGG 0.578021 6_4:+1536692 Msa0970070:CDS
ATGATCGAACAAGCGAGGAT+CGG 0.579324 6_4:-1532315 None:intergenic
CCATTTAGAGGTATCATGTG+TGG 0.580552 6_4:-1539102 None:intergenic
TAACACTCTAGATTTGATCA+TGG 0.581393 6_4:+1539418 Msa0970070:CDS
AGCTGGTTCTGATAACTCAC+TGG 0.582136 6_4:+1536746 Msa0970070:CDS
ATCGAACAAGCGAGGATCGG+TGG 0.583658 6_4:-1532312 None:intergenic
GTCAAGGAATGATAGAGGAT+GGG 0.584575 6_4:+1539067 Msa0970070:CDS
AAAATGGAATGAATGAATGA+CGG 0.585899 6_4:+1532090 Msa0970070:five_prime_UTR
GGCATCCTGATGATCACCAC+TGG 0.585961 6_4:-1532798 None:intergenic
GGTTAGAAAGAAAGAGTGGG+TGG 0.586743 6_4:+1532194 Msa0970070:five_prime_UTR
GCTAGCATGAGTGCTACTAC+AGG 0.587203 6_4:-1538898 None:intergenic
ATGAGAGATATGCTCAAGAG+TGG 0.587313 6_4:+1532560 Msa0970070:CDS
GAATAAATATAAAATTAGAG+TGG 0.591064 6_4:-1532375 None:intergenic
AACACACTCACAGCGGATGT+GGG 0.591799 6_4:+1539947 Msa0970070:CDS
TAAATATAAAATTAGAGTGG+AGG 0.592340 6_4:-1532372 None:intergenic
GAACCTTCTGAGTTGGTGCG+TGG 0.594348 6_4:+1538924 Msa0970070:CDS
AGTAGAGACAATCAAAAGGA+AGG 0.595136 6_4:+1536696 Msa0970070:CDS
CCTGGACAGTTCTACAAGCA+TGG 0.596160 6_4:-1539358 None:intergenic
AGATAGATAGCTGAAAGGAA+AGG 0.598237 6_4:-1532278 None:intergenic
CTATTGTAGAAGCCACAAAA+CGG 0.599182 6_4:-1533571 None:intergenic
TGACCAGATCAAATAAGGAT+GGG 0.600194 6_4:+1538799 Msa0970070:CDS
CATGCTTGTAGAACTGTCCA+GGG 0.600484 6_4:+1539359 Msa0970070:CDS
CTGACAGATAGATAGCTGAA+AGG 0.601392 6_4:-1532283 None:intergenic
CAGCAACAAAATATCGCAGT+GGG 0.602244 6_4:-1538647 None:intergenic
ACTCCGAGTCGGATATCTGG+TGG 0.603409 6_4:+1538864 Msa0970070:CDS
TAGCACTGAACCTTCTGAGT+TGG 0.604503 6_4:+1538917 Msa0970070:CDS
ACACAATCCTAATCGTCTGA+AGG 0.606245 6_4:-1532669 None:intergenic
CAGTTTGGAGTTGTTGACAG+AGG 0.607170 6_4:-1539026 None:intergenic
AAGCCACGCACCAACTCAGA+AGG 0.609491 6_4:-1538927 None:intergenic
GGATTGGATCTATGTAATTG+GGG 0.610057 6_4:-1532438 None:intergenic
CTTGAAAGACTAGATGCCCT+GGG 0.612707 6_4:-1538825 None:intergenic
ATCTAAAGAGCAATTCAGGA+GGG 0.612769 6_4:-1533712 None:intergenic
GTTAGAAAGAAAGAGTGGGT+GGG 0.614277 6_4:+1532195 Msa0970070:five_prime_UTR
AATCTGTCAGAATAAAGTCT+GGG 0.614511 6_4:+1539923 Msa0970070:CDS
TTGATCATGGTACATGGGAA+CGG 0.615390 6_4:+1539431 Msa0970070:CDS
CATAGATCCAATCCGATCTG+AGG 0.615516 6_4:+1532447 Msa0970070:five_prime_UTR
AGGATTGATATACCAGGTGG+AGG 0.615927 6_4:+1532845 Msa0970070:CDS
AATAGAAGAGGCAATTCAGT+GGG 0.616826 6_4:+1533589 Msa0970070:CDS
AAAATTACAAGCATCTTAGG+CGG 0.618232 6_4:-1533743 None:intergenic
TCATCTACGCTGTCTGACCC+AGG 0.619050 6_4:+1539155 Msa0970070:CDS
AGGTGTTTAGAACCTCAGAT+CGG 0.619160 6_4:-1532459 None:intergenic
ATTGGATCTATGTAATTGGG+GGG 0.620324 6_4:-1532436 None:intergenic
GTTGTTGACAGAGGCAGTTG+TGG 0.620580 6_4:-1539017 None:intergenic
GAACAGTGAATTTACCATCA+GGG 0.621091 6_4:-1534266 None:intergenic
TCATGGTACATGGGAACGGA+AGG 0.621718 6_4:+1539435 Msa0970070:CDS
GATTTCTCATCACCTCCACC+TGG 0.624685 6_4:-1532857 None:intergenic
ACACATGATACCTCTAAATG+GGG 0.630148 6_4:+1539104 Msa0970070:CDS
CAAGAACGAGATCTAAGTCA+AGG 0.632784 6_4:+1539051 Msa0970070:CDS
GAGCATAGGATTGATATACC+AGG 0.632893 6_4:+1532839 Msa0970070:CDS
AAGGGAAGTAGTTGACATGT+CGG 0.637029 6_4:+1538758 Msa0970070:CDS
CCTACTTCTGTATCATCCGG+TGG 0.640121 6_4:-1539254 None:intergenic
CAAAACGCCTATCATCTGGA+AGG 0.644718 6_4:+1538961 Msa0970070:CDS
TAGATTTGATCATGGTACAT+GGG 0.647542 6_4:+1539426 Msa0970070:CDS
AAATGCAGCGAATGATAGAG+AGG 0.650149 6_4:+1539127 Msa0970070:CDS
TCTAAAGAGCAATTCAGGAG+GGG 0.650362 6_4:-1533711 None:intergenic
AAAACCTCGAAGGAGTCGCA+AGG 0.650376 6_4:+1533544 Msa0970070:CDS
AAAACCCTATTGAGTTGCCA+GGG 0.651870 6_4:+1539231 Msa0970070:CDS
TGAGAGATATGCTCAAGAGT+GGG 0.652036 6_4:+1532561 Msa0970070:CDS
CAATAGAAGAGGCAATTCAG+TGG 0.654352 6_4:+1533588 Msa0970070:CDS
TACATGGGAACGGAAGGCTG+AGG 0.656511 6_4:+1539441 Msa0970070:CDS
TTTAGAGGTATCATGTGTGG+TGG 0.659923 6_4:-1539099 None:intergenic
TGAATGACGGCAAAGGAAAG+TGG 0.660304 6_4:+1532103 Msa0970070:five_prime_UTR
TGATGAGAGTCTGAGTGCCG+CGG 0.660841 6_4:-1532636 None:intergenic
AGAAGTAGGATCCACGAAGG+AGG 0.661199 6_4:+1539268 Msa0970070:CDS
CATCTAAAGAGCAATTCAGG+AGG 0.662183 6_4:-1533713 None:intergenic
ACTCAATAATGACTCCGAGT+CGG 0.662792 6_4:+1538853 Msa0970070:CDS
GATTGGATCTATGTAATTGG+GGG 0.664172 6_4:-1532437 None:intergenic
AGTGAGTTATCAGAACCAGC+TGG 0.664340 6_4:-1536744 None:intergenic
AATCGTCTGAAGGACTGTTG+AGG 0.665812 6_4:-1532659 None:intergenic
GACGCCATTCGAGCATCCAG+TGG 0.666292 6_4:+1532782 Msa0970070:CDS
ACCCATTTGTCTCCAAAACG+AGG 0.668149 6_4:-1539296 None:intergenic
TTACCGAGATAACATCGTCA+AGG 0.668197 6_4:-1533063 None:intergenic
CAGCATCCCAGATAGGACCT+GGG 0.668781 6_4:-1539172 None:intergenic
TGAATATTGGTTCCACATCG+CGG 0.669322 6_4:-1533808 None:intergenic
AAGTGATGATCGAACAAGCG+AGG 0.670226 6_4:-1532320 None:intergenic
AAATAAGGATGGGATGCCCA+GGG 0.670550 6_4:+1538809 Msa0970070:CDS
TGATGTCTACAGTTGATGCA+AGG 0.671240 6_4:-1534236 None:intergenic
TGAACCAAAATGGGATCCAG+AGG 0.672548 6_4:+1539193 Msa0970070:CDS
TAACTCACACTAATCATATG+CGG 0.680837 6_4:-1540050 None:intergenic
TCTCCACCAGATATCCGACT+CGG 0.683306 6_4:-1538867 None:intergenic
GCCATATGTTGAATATGTGA+AGG 0.686940 6_4:+1539511 Msa0970070:CDS
CCAGCAACAAAATATCGCAG+TGG 0.688887 6_4:-1538648 None:intergenic
GTTGTGTTGTGTATACACAA+TGG 0.691115 6_4:-1532166 None:intergenic
GCTCAGCTGTTACATCGACA+AGG 0.700373 6_4:-1540155 None:intergenic
CATAGGATTGATATACCAGG+TGG 0.702832 6_4:+1532842 Msa0970070:CDS
AAAGGTTAGAAAGAAAGAGT+GGG 0.703228 6_4:+1532191 Msa0970070:five_prime_UTR
ATATTGGTTCCACATCGCGG+TGG 0.717129 6_4:-1533805 None:intergenic
TACAGAAGTAGGATCCACGA+AGG 0.738588 6_4:+1539265 Msa0970070:CDS
GTATACACAACACAACACAA+AGG 0.744619 6_4:+1532173 Msa0970070:five_prime_UTR
TCTGGGAAACACACTCACAG+CGG 0.748983 6_4:+1539940 Msa0970070:CDS
CGGTGATGGGATAATCAACG+AGG 0.751431 6_4:+1534692 Msa0970070:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTTTTGTTGAAAATT+CGG + chr6_4:1535806-1535825 Msa0970070:intron 10.0%
!! TATGCTTATTTAAAAAATAA+TGG - chr6_4:1536567-1536586 None:intergenic 10.0%
!! GAATAAATATAAAATTAGAG+TGG - chr6_4:1532378-1532397 None:intergenic 15.0%
!!! AAACTAAACATACTTTTTTT+AGG + chr6_4:1533376-1533395 Msa0970070:intron 15.0%
!! TATTGTATAAAAACCTTAAA+TGG - chr6_4:1534342-1534361 None:intergenic 15.0%
!! ATATGTATTAAAAATTACCA+AGG - chr6_4:1535850-1535869 None:intergenic 15.0%
!!! GATTTTTTTTTCTATGATTT+TGG - chr6_4:1536100-1536119 None:intergenic 15.0%
!! TTATTTAAAAAATAATGGTG+GGG - chr6_4:1536562-1536581 None:intergenic 15.0%
!! CTTATTTAAAAAATAATGGT+GGG - chr6_4:1536563-1536582 None:intergenic 15.0%
!!! TTTTAAATAAGCATACTTTA+AGG + chr6_4:1536572-1536591 Msa0970070:intron 15.0%
!! CATTAAAAAAAATTACAGAA+AGG - chr6_4:1537227-1537246 None:intergenic 15.0%
!!! GATTTCTTTTATACTTTATT+TGG + chr6_4:1537581-1537600 Msa0970070:intron 15.0%
!! TATATACTAATTCAATTTCT+TGG + chr6_4:1537797-1537816 Msa0970070:intron 15.0%
!!! TTTACTCCTTATTTTTTTAA+CGG + chr6_4:1539553-1539572 Msa0970070:intron 15.0%
!! TGAAATCAAAATAAAAAAGA+TGG - chr6_4:1540230-1540249 None:intergenic 15.0%
!!! ATTCTTTTATTCTAATGTTT+TGG + chr6_4:1540333-1540352 Msa0970070:three_prime_UTR 15.0%
!!! CAAACTTTTTCTTTTCTTTT+CGG + chr6_4:1532243-1532262 Msa0970070:five_prime_UTR 20.0%
!!! AAACTTTTTCTTTTCTTTTC+GGG + chr6_4:1532244-1532263 Msa0970070:five_prime_UTR 20.0%
!! TAAATATAAAATTAGAGTGG+AGG - chr6_4:1532375-1532394 None:intergenic 20.0%
!!! TTTTAATTTTATCCAAAGGT+TGG - chr6_4:1532416-1532435 None:intergenic 20.0%
!! AATTGAATTGAATTGAATTG+AGG - chr6_4:1532482-1532501 None:intergenic 20.0%
!! ATAACATCGAATTAAATTAG+AGG - chr6_4:1532536-1532555 None:intergenic 20.0%
!!! ACATACTTTTTTTAGGTTAT+AGG + chr6_4:1533383-1533402 Msa0970070:intron 20.0%
!!! CATACTTTTTTTAGGTTATA+GGG + chr6_4:1533384-1533403 Msa0970070:intron 20.0%
!!! TTTAAAATTACAAGCATCTT+AGG - chr6_4:1533749-1533768 None:intergenic 20.0%
!! ATATAAATATACTATGCAAG+AGG + chr6_4:1534118-1534137 Msa0970070:intron 20.0%
!! AAACTAACCTTATTAACTAT+TGG + chr6_4:1534390-1534409 Msa0970070:intron 20.0%
!! AGTTTACATATCAATATTAG+AGG + chr6_4:1534458-1534477 Msa0970070:intron 20.0%
!! GTTTACATATCAATATTAGA+GGG + chr6_4:1534459-1534478 Msa0970070:intron 20.0%
!!! AGTTTTTTGATTGAGTAAAT+TGG + chr6_4:1535398-1535417 Msa0970070:intron 20.0%
!! AAGAAACTAAAATCTCTTAT+AGG - chr6_4:1535585-1535604 None:intergenic 20.0%
!! TTAAAGATAGCTCTTTAAAT+TGG - chr6_4:1535710-1535729 None:intergenic 20.0%
!! GCTTATTTAAAAAATAATGG+TGG - chr6_4:1536564-1536583 None:intergenic 20.0%
!!! CATTATAACAGTAGATTTTT+TGG + chr6_4:1537201-1537220 Msa0970070:intron 20.0%
!! TGTTCAAATTAAAATCAAAC+TGG + chr6_4:1537349-1537368 Msa0970070:intron 20.0%
!! CAGAATAATAAAATTCACTT+TGG + chr6_4:1537867-1537886 Msa0970070:CDS 20.0%
!! ATAAAAATGTTTGTATGTCA+TGG - chr6_4:1537934-1537953 None:intergenic 20.0%
!! TTTCAACTATAAGCTAATTA+TGG - chr6_4:1538077-1538096 None:intergenic 20.0%
!!! AAAAGTTTAATTTCAACACA+AGG - chr6_4:1538199-1538218 None:intergenic 20.0%
!!! TAAACTTTTGTTGAAAAGAA+TGG + chr6_4:1538210-1538229 Msa0970070:intron 20.0%
!!! AAACTTTTGTTGAAAAGAAT+GGG + chr6_4:1538211-1538230 Msa0970070:intron 20.0%
!! TTTAATGACAGTTAAACAAT+AGG + chr6_4:1538462-1538481 Msa0970070:intron 20.0%
!!! AGTTATTTTCAATTCTTTGA+CGG + chr6_4:1540068-1540087 Msa0970070:three_prime_UTR 20.0%
!!! GCTTTGTAAATTTTTTGTTT+CGG + chr6_4:1540176-1540195 Msa0970070:three_prime_UTR 20.0%
! AAAATGGAATGAATGAATGA+CGG + chr6_4:1532090-1532109 Msa0970070:five_prime_UTR 25.0%
! ATCGAATTAAATTAGAGGTT+GGG - chr6_4:1532531-1532550 None:intergenic 25.0%
!!! ATGAGAAATCTGATTTGTTA+GGG + chr6_4:1532870-1532889 Msa0970070:CDS 25.0%
! TAACAAGTAAAGCTTTACTT+TGG + chr6_4:1533023-1533042 Msa0970070:CDS 25.0%
! AACAAGTAAAGCTTTACTTT+GGG + chr6_4:1533024-1533043 Msa0970070:CDS 25.0%
!!! ATTGCTTTTGTCTTAGATTA+AGG + chr6_4:1533095-1533114 Msa0970070:intron 25.0%
! ATAAGCTGTTTATCAAAACA+TGG - chr6_4:1533121-1533140 None:intergenic 25.0%
! AAACAAAAGATATGACTGAT+TGG + chr6_4:1533407-1533426 Msa0970070:intron 25.0%
!!! AAATGGCACTTATTTTGAAA+TGG - chr6_4:1534325-1534344 None:intergenic 25.0%
!!! TTCAAAATAAGTGCCATTTA+AGG + chr6_4:1534326-1534345 Msa0970070:intron 25.0%
! ATTATATTCCACGTATATGA+TGG - chr6_4:1534427-1534446 None:intergenic 25.0%
!! ATTGTATTTTCTTTTCAGTC+TGG - chr6_4:1534870-1534889 None:intergenic 25.0%
!! AAAAAAATCCATCTAGAGTA+AGG - chr6_4:1535752-1535771 None:intergenic 25.0%
! CAACAAAAAAAAAATCACCA+AGG - chr6_4:1535800-1535819 None:intergenic 25.0%
! TGAAACTTATTCCTATCTTA+GGG - chr6_4:1535975-1535994 None:intergenic 25.0%
! TTGAAACTTATTCCTATCTT+AGG - chr6_4:1535976-1535995 None:intergenic 25.0%
!! TCACCTGAATTGAAATATTT+TGG + chr6_4:1536021-1536040 Msa0970070:intron 25.0%
! ATTAGCACCCAATTAATTAA+GGG + chr6_4:1536051-1536070 Msa0970070:intron 25.0%
! TTCTATTCTTAGATTCTTTG+AGG - chr6_4:1536177-1536196 None:intergenic 25.0%
! GATAGTATTATTTGCAAACT+GGG + chr6_4:1536237-1536256 Msa0970070:intron 25.0%
! ACTACTAGAATTAACAAGAA+TGG + chr6_4:1536349-1536368 Msa0970070:intron 25.0%
! AATTAACAAGAATGGAGATA+AGG + chr6_4:1536357-1536376 Msa0970070:intron 25.0%
! ATTATTGATGTTGCAGATTT+AGG - chr6_4:1536392-1536411 None:intergenic 25.0%
! AGTGTAGAAAATGATATGAT+AGG - chr6_4:1536419-1536438 None:intergenic 25.0%
! TGAAAAATATTCCTGAGTAA+CGG - chr6_4:1536490-1536509 None:intergenic 25.0%
! GTTTATTTGTAGGTTGTTAA+TGG + chr6_4:1536666-1536685 Msa0970070:intron 25.0%
! AATAGTTCAATTAACATTCC+TGG - chr6_4:1536871-1536890 None:intergenic 25.0%
! TACTAAGTAGGAAAAATAAG+AGG - chr6_4:1537146-1537165 None:intergenic 25.0%
! AATGAACAGCTGATTATAAA+AGG - chr6_4:1537181-1537200 None:intergenic 25.0%
! TCGATTTACTTTAGCATTAT+CGG + chr6_4:1537272-1537291 Msa0970070:intron 25.0%
! AGCATATTATTTACAGTATG+TGG - chr6_4:1537491-1537510 None:intergenic 25.0%
! ACTGTAAATAATATGCTTAC+TGG + chr6_4:1537494-1537513 Msa0970070:intron 25.0%
! GTCAAATGTTTACTTATAGT+AGG + chr6_4:1537540-1537559 Msa0970070:intron 25.0%
! AAAGTATAAAAGAAATCCCA+GGG - chr6_4:1537578-1537597 None:intergenic 25.0%
! TAAAGTATAAAAGAAATCCC+AGG - chr6_4:1537579-1537598 None:intergenic 25.0%
! GAGTAAATAATGATATGTAG+TGG - chr6_4:1537608-1537627 None:intergenic 25.0%
!!! TTCATTTTTGGTAGAATAGA+TGG + chr6_4:1537679-1537698 Msa0970070:intron 25.0%
! TAATTCAATTTCTTGGTTCA+GGG + chr6_4:1537804-1537823 Msa0970070:intron 25.0%
!!! TATTATGGTTTTGTTAGTGA+TGG + chr6_4:1537903-1537922 Msa0970070:CDS 25.0%
!! ACAAACATTTTTATACTGCT+TGG + chr6_4:1537940-1537959 Msa0970070:intron 25.0%
! ATTATGGCTAAATATTCTCA+AGG - chr6_4:1538061-1538080 None:intergenic 25.0%
! TTAATTTCAACACAAGGTTA+CGG - chr6_4:1538193-1538212 None:intergenic 25.0%
! AATTAAAGCCGTTCTTTAAA+AGG + chr6_4:1538267-1538286 Msa0970070:intron 25.0%
!! ATTAAAGCCGTTCTTTAAAA+GGG + chr6_4:1538268-1538287 Msa0970070:intron 25.0%
!!! ATAACTACCCTTTTAAAGAA+CGG - chr6_4:1538278-1538297 None:intergenic 25.0%
!! TCTTTAAAAGGGTAGTTATA+TGG + chr6_4:1538279-1538298 Msa0970070:intron 25.0%
! GAGGAGAAAATAAAAAGTTT+GGG + chr6_4:1538521-1538540 Msa0970070:intron 25.0%
! AGGAGAAAATAAAAAGTTTG+GGG + chr6_4:1538522-1538541 Msa0970070:intron 25.0%
!! ATTTTTCATACTTCTACAGA+TGG + chr6_4:1539472-1539491 Msa0970070:CDS 25.0%
!! TTTTTCATACTTCTACAGAT+GGG + chr6_4:1539473-1539492 Msa0970070:CDS 25.0%
! ACTAAACTGGTAAAAAATCT+TGG + chr6_4:1539684-1539703 Msa0970070:intron 25.0%
! CTAAACTGGTAAAAAATCTT+GGG + chr6_4:1539685-1539704 Msa0970070:intron 25.0%
! TTTGAGAATGATATCTTGTT+TGG + chr6_4:1539781-1539800 Msa0970070:intron 25.0%
!!! GTTATTTTCAATTCTTTGAC+GGG + chr6_4:1540069-1540088 Msa0970070:three_prime_UTR 25.0%
AAAGGTTAGAAAGAAAGAGT+GGG + chr6_4:1532191-1532210 Msa0970070:five_prime_UTR 30.0%
!!! GGGGTTTTAATTTTATCCAA+AGG - chr6_4:1532420-1532439 None:intergenic 30.0%
TCGAATTAAATTAGAGGTTG+GGG - chr6_4:1532530-1532549 None:intergenic 30.0%
CATCGAATTAAATTAGAGGT+TGG - chr6_4:1532532-1532551 None:intergenic 30.0%
TAGTACTACCAGTAGAATTA+CGG - chr6_4:1532595-1532614 None:intergenic 30.0%
!! GATGAGAAATCTGATTTGTT+AGG + chr6_4:1532869-1532888 Msa0970070:CDS 30.0%
ACAAGTAAAGCTTTACTTTG+GGG + chr6_4:1533025-1533044 Msa0970070:CDS 30.0%
! ATTGTTTTCATAAGCTATCC+CGG + chr6_4:1533197-1533216 Msa0970070:intron 30.0%
TCAAATAAGTCAATCCAAAC+AGG + chr6_4:1533322-1533341 Msa0970070:intron 30.0%
!! TATGTTTAGTTTGTCACGAT+AGG - chr6_4:1533368-1533387 None:intergenic 30.0%
!!! CTTGTTTTATAAAACCTCGA+AGG + chr6_4:1533534-1533553 Msa0970070:CDS 30.0%
TTACATCTAAAGAGCAATTC+AGG - chr6_4:1533719-1533738 None:intergenic 30.0%
AAAATTACAAGCATCTTAGG+CGG - chr6_4:1533746-1533765 None:intergenic 30.0%
GTGTAACATACCTTGAATAT+TGG - chr6_4:1533824-1533843 None:intergenic 30.0%
TTTGACGCTATCTTTGAATT+TGG + chr6_4:1533916-1533935 Msa0970070:intron 30.0%
AAATATACTATGCAAGAGGA+AGG + chr6_4:1534122-1534141 Msa0970070:intron 30.0%
AAATTCACTGTTCTGTAGTA+TGG + chr6_4:1534276-1534295 Msa0970070:intron 30.0%
AAGCACACCAATAGTTAATA+AGG - chr6_4:1534400-1534419 None:intergenic 30.0%
TTGAAATCTGTACTTCTTTC+AGG + chr6_4:1534654-1534673 Msa0970070:intron 30.0%
!!! TGCTTGTTTTATCTCCTAAA+AGG + chr6_4:1534802-1534821 Msa0970070:intron 30.0%
!! AGATCAAGAGTATCATTGTA+TGG - chr6_4:1534899-1534918 None:intergenic 30.0%
ATGATCTGTGTAGATATAAG+AGG - chr6_4:1534926-1534945 None:intergenic 30.0%
ATGTTATGATCTGTGTAGAT+TGG - chr6_4:1535064-1535083 None:intergenic 30.0%
ATCGTTAAAATATGGACAGT+GGG - chr6_4:1535186-1535205 None:intergenic 30.0%
TATCGTTAAAATATGGACAG+TGG - chr6_4:1535187-1535206 None:intergenic 30.0%
!!! GTCCATATTTTAACGATATG+AGG + chr6_4:1535189-1535208 Msa0970070:intron 30.0%
AGCCTCATATCGTTAAAATA+TGG - chr6_4:1535194-1535213 None:intergenic 30.0%
! CGTTCATACTAGGTTTTTAT+TGG + chr6_4:1535273-1535292 Msa0970070:intron 30.0%
CTAAGCATTAAACAATGATC+CGG + chr6_4:1535372-1535391 Msa0970070:intron 30.0%
TAAGCATTAAACAATGATCC+GGG + chr6_4:1535373-1535392 Msa0970070:intron 30.0%
TGTAATTTCAACAATCTCTG+AGG - chr6_4:1535437-1535456 None:intergenic 30.0%
ATTACAGCAATCTCCAAATT+TGG + chr6_4:1535451-1535470 Msa0970070:intron 30.0%
AATCCAAATTCAGCCAAATT+TGG - chr6_4:1535467-1535486 None:intergenic 30.0%
AAATTTGGCTGAATTTGGAT+TGG + chr6_4:1535466-1535485 Msa0970070:intron 30.0%
GTTTCTTACCAAGAAAATAC+AGG + chr6_4:1535598-1535617 Msa0970070:intron 30.0%
! TTAAGGATCCTGTATTTTCT+TGG - chr6_4:1535609-1535628 None:intergenic 30.0%
AGAAAATACAGGATCCTTAA+CGG + chr6_4:1535609-1535628 Msa0970070:intron 30.0%
AAAATTCTTCGTAAAAGCCT+TGG + chr6_4:1535780-1535799 Msa0970070:intron 30.0%
TTTGTTGAAAATTCGGTATC+CGG + chr6_4:1535813-1535832 Msa0970070:intron 30.0%
AAATTACCAAGGTTATCCTT+GGG - chr6_4:1535839-1535858 None:intergenic 30.0%
AAAATTACCAAGGTTATCCT+TGG - chr6_4:1535840-1535859 None:intergenic 30.0%
ATATAGAGAACTCCAGATAA+TGG + chr6_4:1535866-1535885 Msa0970070:intron 30.0%
TATAGAGAACTCCAGATAAT+GGG + chr6_4:1535867-1535886 Msa0970070:intron 30.0%
!!! TACTGTTGTTTTTGTACGAA+AGG + chr6_4:1535905-1535924 Msa0970070:intron 30.0%
GAAACTTATTCCTATCTTAG+GGG - chr6_4:1535974-1535993 None:intergenic 30.0%
AGGCCAAAATATTTCAATTC+AGG - chr6_4:1536027-1536046 None:intergenic 30.0%
!!! AATTGAAATATTTTGGCCTG+TGG + chr6_4:1536028-1536047 Msa0970070:intron 30.0%
GATTAGCACCCAATTAATTA+AGG + chr6_4:1536050-1536069 Msa0970070:intron 30.0%
TAGCAGACCCTTAATTAATT+GGG - chr6_4:1536061-1536080 None:intergenic 30.0%
AGTGGTTAAACTAGGATAAA+AGG - chr6_4:1536122-1536141 None:intergenic 30.0%
TATCCTAGTTTAACCACTAT+TGG + chr6_4:1536124-1536143 Msa0970070:intron 30.0%
TACTATCCTCTTATTGAAAG+AGG - chr6_4:1536224-1536243 None:intergenic 30.0%
GGATAGTATTATTTGCAAAC+TGG + chr6_4:1536236-1536255 Msa0970070:intron 30.0%
TTATGACAGGAATTGATCAA+GGG - chr6_4:1536299-1536318 None:intergenic 30.0%
GTTCATTATTCCAACAAATC+TGG + chr6_4:1536525-1536544 Msa0970070:intron 30.0%
ACTTAGTAGAGACAATCAAA+AGG + chr6_4:1536692-1536711 Msa0970070:CDS 30.0%
GAAGGAATATCTATACCTAT+TGG + chr6_4:1536714-1536733 Msa0970070:CDS 30.0%
ATTGTTCCCTTAAATGTGTA+TGG + chr6_4:1537419-1537438 Msa0970070:intron 30.0%
GTGGCATTCAAATCAAAAAA+TGG - chr6_4:1537705-1537724 None:intergenic 30.0%
CTAATTCAATTTCTTGGTTC+AGG + chr6_4:1537803-1537822 Msa0970070:intron 30.0%
AATTCAATTTCTTGGTTCAG+GGG + chr6_4:1537805-1537824 Msa0970070:intron 30.0%
GGATTAACAGTCTCATATTA+TGG + chr6_4:1537888-1537907 Msa0970070:CDS 30.0%
GTATTCACTACAATTCTAGA+TGG - chr6_4:1538156-1538175 None:intergenic 30.0%
ACATGTTCTCTAAATTAGAC+AGG - chr6_4:1538240-1538259 None:intergenic 30.0%
GTAGTTATATGGACTTTACA+TGG + chr6_4:1538290-1538309 Msa0970070:intron 30.0%
TTAGGAAGTAGTAATAACGT+GGG + chr6_4:1538318-1538337 Msa0970070:intron 30.0%
! GAAGAATTGTGGTGTTAAAA+TGG + chr6_4:1538370-1538389 Msa0970070:intron 30.0%
GGAGGAGAAAATAAAAAGTT+TGG + chr6_4:1538520-1538539 Msa0970070:intron 30.0%
GAACCAAAATTGAAAATTCG+AGG - chr6_4:1538560-1538579 None:intergenic 30.0%
TAACACTCTAGATTTGATCA+TGG + chr6_4:1539418-1539437 Msa0970070:CDS 30.0%
TAGATTTGATCATGGTACAT+GGG + chr6_4:1539426-1539445 Msa0970070:CDS 30.0%
ACCTTCACATATTCAACATA+TGG - chr6_4:1539515-1539534 None:intergenic 30.0%
CAGCATCCGTTAAAAAAATA+AGG - chr6_4:1539562-1539581 None:intergenic 30.0%
!!! CTTATTTTTTTAACGGATGC+TGG + chr6_4:1539560-1539579 Msa0970070:intron 30.0%
CTATATATTGACGACTAAAC+TGG + chr6_4:1539671-1539690 Msa0970070:intron 30.0%
AAACTGATCACAATTGTCAA+CGG - chr6_4:1539731-1539750 None:intergenic 30.0%
AAATCTGTCAGAATAAAGTC+TGG + chr6_4:1539922-1539941 Msa0970070:CDS 30.0%
AATCTGTCAGAATAAAGTCT+GGG + chr6_4:1539923-1539942 Msa0970070:CDS 30.0%
TAACTCACACTAATCATATG+CGG - chr6_4:1540053-1540072 None:intergenic 30.0%
ATCTGAATTCATAAAGGAGA+AGG - chr6_4:1540113-1540132 None:intergenic 30.0%
TTGGGTATCTGAATTCATAA+AGG - chr6_4:1540119-1540138 None:intergenic 30.0%
!! AAAAAGTACACTGCATTTTC+TGG + chr6_4:1540258-1540277 Msa0970070:three_prime_UTR 30.0%
AAATGATCAATTCGAGGAAA+TGG - chr6_4:1540312-1540331 None:intergenic 30.0%
AGAATCAAATGATCAATTCG+AGG - chr6_4:1540318-1540337 None:intergenic 30.0%
CTCACAACAACTGAGAAAAA+TGG + chr6_4:1532074-1532093 Msa0970070:five_prime_UTR 35.0%
GTTGTGTTGTGTATACACAA+TGG - chr6_4:1532169-1532188 None:intergenic 35.0%
GTATACACAACACAACACAA+AGG + chr6_4:1532173-1532192 Msa0970070:five_prime_UTR 35.0%
CAAAGGTTAGAAAGAAAGAG+TGG + chr6_4:1532190-1532209 Msa0970070:five_prime_UTR 35.0%
AGATAGATAGCTGAAAGGAA+AGG - chr6_4:1532281-1532300 None:intergenic 35.0%
TCATCAAACTATCCAACCTT+TGG + chr6_4:1532401-1532420 Msa0970070:five_prime_UTR 35.0%
ATTGGATCTATGTAATTGGG+GGG - chr6_4:1532439-1532458 None:intergenic 35.0%
GATTGGATCTATGTAATTGG+GGG - chr6_4:1532440-1532459 None:intergenic 35.0%
GGATTGGATCTATGTAATTG+GGG - chr6_4:1532441-1532460 None:intergenic 35.0%
! CGGATTGGATCTATGTAATT+GGG - chr6_4:1532442-1532461 None:intergenic 35.0%
! TCGGATTGGATCTATGTAAT+TGG - chr6_4:1532443-1532462 None:intergenic 35.0%
TAGAGGTTGGGGATTAATTA+GGG - chr6_4:1532519-1532538 None:intergenic 35.0%
TTAGAGGTTGGGGATTAATT+AGG - chr6_4:1532520-1532539 None:intergenic 35.0%
AGTACTACCAGTAGAATTAC+GGG - chr6_4:1532594-1532613 None:intergenic 35.0%
TGTTCTCAATTATCAACTGC+TGG + chr6_4:1532689-1532708 Msa0970070:CDS 35.0%
! CAGCAAAGAATTTTGAGCAT+AGG + chr6_4:1532825-1532844 Msa0970070:CDS 35.0%
!! ATCTGATTTGTTAGGGTATG+TGG + chr6_4:1532877-1532896 Msa0970070:CDS 35.0%
GTGATGTGTTTCTTCAAAAC+AGG + chr6_4:1533439-1533458 Msa0970070:intron 35.0%
AAACAGGTTTCTTATCATGC+TGG + chr6_4:1533455-1533474 Msa0970070:intron 35.0%
CTATTGTAGAAGCCACAAAA+CGG - chr6_4:1533574-1533593 None:intergenic 35.0%
AATAGAAGAGGCAATTCAGT+GGG + chr6_4:1533589-1533608 Msa0970070:CDS 35.0%
GCTTCTTGGAAGAAACTAAA+GGG - chr6_4:1533661-1533680 None:intergenic 35.0%
TGCTTCTTGGAAGAAACTAA+AGG - chr6_4:1533662-1533681 None:intergenic 35.0%
ATCTAAAGAGCAATTCAGGA+GGG - chr6_4:1533715-1533734 None:intergenic 35.0%
TACACACAGCTTACATGATT+GGG - chr6_4:1533853-1533872 None:intergenic 35.0%
ATACACACAGCTTACATGAT+TGG - chr6_4:1533854-1533873 None:intergenic 35.0%
TGTGTGTATGCTTCTTGTTA+TGG + chr6_4:1533865-1533884 Msa0970070:intron 35.0%
ATAACATACGATCACAACGA+TGG - chr6_4:1533891-1533910 None:intergenic 35.0%
AAGGATACTAAAGCAACTTG+TGG + chr6_4:1534141-1534160 Msa0970070:intron 35.0%
GTAGTTAAAACAACATCTGC+TGG + chr6_4:1534201-1534220 Msa0970070:CDS 35.0%
GAACAGTGAATTTACCATCA+GGG - chr6_4:1534269-1534288 None:intergenic 35.0%
AGAACAGTGAATTTACCATC+AGG - chr6_4:1534270-1534289 None:intergenic 35.0%
!!! GGCACTTATTTTGAAATGGA+GGG - chr6_4:1534321-1534340 None:intergenic 35.0%
!!! TGGCACTTATTTTGAAATGG+AGG - chr6_4:1534322-1534341 None:intergenic 35.0%
TATTCCACGTATATGATGGT+GGG - chr6_4:1534423-1534442 None:intergenic 35.0%
ATATTCCACGTATATGATGG+TGG - chr6_4:1534424-1534443 None:intergenic 35.0%
! AAGTGTCACTCATTGTGAAA+CGG + chr6_4:1534563-1534582 Msa0970070:intron 35.0%
CTTTCAGGAATCATATGTGT+TGG + chr6_4:1534669-1534688 Msa0970070:intron 35.0%
! CAGTATCTGAAAGACCTTTT+AGG - chr6_4:1534819-1534838 None:intergenic 35.0%
! ATAGTCGTTCTGTATTTTCC+AGG - chr6_4:1534847-1534866 None:intergenic 35.0%
!!! AAAGTTTTGAGCCCACAAAT+GGG + chr6_4:1535027-1535046 Msa0970070:intron 35.0%
TACTGACAATCGTTCATACT+AGG + chr6_4:1535263-1535282 Msa0970070:intron 35.0%
TGAACTCTTCTCTTAATGGT+AGG - chr6_4:1535340-1535359 None:intergenic 35.0%
GCTATGAACTCTTCTCTTAA+TGG - chr6_4:1535344-1535363 None:intergenic 35.0%
AAGCATTAAACAATGATCCG+GGG + chr6_4:1535374-1535393 Msa0970070:intron 35.0%
TCTCCAAATTTGGCTGAATT+TGG + chr6_4:1535461-1535480 Msa0970070:intron 35.0%
CTCAAATTCAGATAGGAGAA+TGG - chr6_4:1535538-1535557 None:intergenic 35.0%
CATTCTCCTATCTGAATTTG+AGG + chr6_4:1535536-1535555 Msa0970070:intron 35.0%
GAAAATACAGGATCCTTAAC+GGG + chr6_4:1535610-1535629 Msa0970070:intron 35.0%
AAACCTCGCTATACGTTATT+TGG + chr6_4:1535668-1535687 Msa0970070:intron 35.0%
CAAAAAGTCCTTACTCTAGA+TGG + chr6_4:1535741-1535760 Msa0970070:intron 35.0%
ACAAGAAAATCCCCTAAGAT+AGG + chr6_4:1535961-1535980 Msa0970070:intron 35.0%
CTAGCAGACCCTTAATTAAT+TGG - chr6_4:1536062-1536081 None:intergenic 35.0%
CAATTAATTAAGGGTCTGCT+AGG + chr6_4:1536060-1536079 Msa0970070:intron 35.0%
GTTATGACAGGAATTGATCA+AGG - chr6_4:1536300-1536319 None:intergenic 35.0%
TTCAATTGAACAGTTTCCAG+AGG - chr6_4:1536322-1536341 None:intergenic 35.0%
GTGTGTGTGTTCAATATATG+CGG - chr6_4:1536609-1536628 None:intergenic 35.0%
ATAAACTTGCCCATCATCAA+CGG - chr6_4:1536652-1536671 None:intergenic 35.0%
! TGATGGGCAAGTTTATTTGT+AGG + chr6_4:1536656-1536675 Msa0970070:intron 35.0%
AGTAGAGACAATCAAAAGGA+AGG + chr6_4:1536696-1536715 Msa0970070:CDS 35.0%
CAAATATTTGACGAGAATCC+AGG + chr6_4:1536850-1536869 Msa0970070:intron 35.0%
CGAACAATTGTGTACTAAGT+AGG - chr6_4:1537158-1537177 None:intergenic 35.0%
AAATCAAACTGGAAAGCAGT+AGG + chr6_4:1537360-1537379 Msa0970070:intron 35.0%
TTCCCTTAAATGTGTATGGA+AGG + chr6_4:1537423-1537442 Msa0970070:intron 35.0%
TCCCTTAAATGTGTATGGAA+GGG + chr6_4:1537424-1537443 Msa0970070:intron 35.0%
!! TTATTAAGGGCATTAGAAGG+AGG - chr6_4:1537457-1537476 None:intergenic 35.0%
TCCTTCTAATGCCCTTAATA+AGG + chr6_4:1537456-1537475 Msa0970070:intron 35.0%
!! ACCTTATTAAGGGCATTAGA+AGG - chr6_4:1537460-1537479 None:intergenic 35.0%
GGCAAAACAGACCTTATTAA+GGG - chr6_4:1537470-1537489 None:intergenic 35.0%
TGGCAAAACAGACCTTATTA+AGG - chr6_4:1537471-1537490 None:intergenic 35.0%
! TAGGAGTATATTAATGCCCT+GGG + chr6_4:1537559-1537578 Msa0970070:intron 35.0%
TGAATGAACTAAAGATGACG+TGG + chr6_4:1537649-1537668 Msa0970070:intron 35.0%
! CGTGGTTTACACTTCATTTT+TGG + chr6_4:1537667-1537686 Msa0970070:intron 35.0%
TGTTGACATGAGAATGAAAG+TGG - chr6_4:1537724-1537743 None:intergenic 35.0%
!! TGCAAGTGTTTCTGAAGTAT+CGG - chr6_4:1537770-1537789 None:intergenic 35.0%
ATTCAATTTCTTGGTTCAGG+GGG + chr6_4:1537806-1537825 Msa0970070:intron 35.0%
!!! CTTGGTTTTTAGTTATGTGC+TGG + chr6_4:1537958-1537977 Msa0970070:intron 35.0%
TGAACCTAAGAGCTAATACA+CGG - chr6_4:1538018-1538037 None:intergenic 35.0%
TTCTAGATGGTTATTGTGTG+AGG - chr6_4:1538143-1538162 None:intergenic 35.0%
TTGTAGTGAATACAATGCTC+AGG + chr6_4:1538163-1538182 Msa0970070:intron 35.0%
GTTAGGAAGTAGTAATAACG+TGG + chr6_4:1538317-1538336 Msa0970070:intron 35.0%
GGTGTTAAAATGGTGCATTT+AGG + chr6_4:1538380-1538399 Msa0970070:intron 35.0%
GTTAAAATGGTGCATTTAGG+TGG + chr6_4:1538383-1538402 Msa0970070:intron 35.0%
GCACGGAGAAAAAGATAAAA+TGG + chr6_4:1538499-1538518 Msa0970070:intron 35.0%
CGGAGAAAAAGATAAAATGG+AGG + chr6_4:1538502-1538521 Msa0970070:intron 35.0%
! AAAAGTTTGGGGTACACTAT+AGG + chr6_4:1538533-1538552 Msa0970070:intron 35.0%
! GGACCTCGAATTTTCAATTT+TGG + chr6_4:1538554-1538573 Msa0970070:intron 35.0%
TATATCTCATGTTGCAGTGT+TGG + chr6_4:1538593-1538612 Msa0970070:intron 35.0%
!! GAAAAATATCAGAAGCGCTT+TGG + chr6_4:1538624-1538643 Msa0970070:CDS 35.0%
ATTTGATCTGGTCATGATGT+CGG - chr6_4:1538793-1538812 None:intergenic 35.0%
CATCATGACCAGATCAAATA+AGG + chr6_4:1538794-1538813 Msa0970070:CDS 35.0%
ATGACCAGATCAAATAAGGA+TGG + chr6_4:1538798-1538817 Msa0970070:CDS 35.0%
TGACCAGATCAAATAAGGAT+GGG + chr6_4:1538799-1538818 Msa0970070:CDS 35.0%
TCTAAGTCAAGGAATGATAG+AGG + chr6_4:1539062-1539081 Msa0970070:CDS 35.0%
CACACATGATACCTCTAAAT+GGG + chr6_4:1539103-1539122 Msa0970070:CDS 35.0%
ACACATGATACCTCTAAATG+GGG + chr6_4:1539104-1539123 Msa0970070:CDS 35.0%
!! AGACAAATGGGTTGTTTCAA+AGG + chr6_4:1539307-1539326 Msa0970070:CDS 35.0%
!! GACAAATGGGTTGTTTCAAA+GGG + chr6_4:1539308-1539327 Msa0970070:CDS 35.0%
CTAGATTTGATCATGGTACA+TGG + chr6_4:1539425-1539444 Msa0970070:CDS 35.0%
GCCATATGTTGAATATGTGA+AGG + chr6_4:1539511-1539530 Msa0970070:CDS 35.0%
! TCAACGGTAGTCTTTGAAAA+AGG - chr6_4:1539715-1539734 None:intergenic 35.0%
CTTCTGCACACTAAATAACA+TGG - chr6_4:1539816-1539835 None:intergenic 35.0%
ATAAAACTTCAGTTCCCCTT+CGG + chr6_4:1539890-1539909 Msa0970070:intron 35.0%
GAAATTACTTGTCCATTGAG+TGG - chr6_4:1539991-1540010 None:intergenic 35.0%
!!! TTCAATTCTTTGACGGGTTT+TGG + chr6_4:1540075-1540094 Msa0970070:three_prime_UTR 35.0%
GGTATTTGACAAGACAGATT+GGG - chr6_4:1540137-1540156 None:intergenic 35.0%
AGGTATTTGACAAGACAGAT+TGG - chr6_4:1540138-1540157 None:intergenic 35.0%
GAATGAATGAATGACGGCAA+AGG + chr6_4:1532096-1532115 Msa0970070:five_prime_UTR 40.0%
GATCGATCCAACTCAACAAT+GGG - chr6_4:1532134-1532153 None:intergenic 40.0%
GTTAGAAAGAAAGAGTGGGT+GGG + chr6_4:1532195-1532214 Msa0970070:five_prime_UTR 40.0%
CTGACAGATAGATAGCTGAA+AGG - chr6_4:1532286-1532305 None:intergenic 40.0%
! TTTAGAACCTCAGATCGGAT+TGG - chr6_4:1532457-1532476 None:intergenic 40.0%
! AGGTGTTTAGAACCTCAGAT+CGG - chr6_4:1532462-1532481 None:intergenic 40.0%
TGGGGATTAATTAGGGTTTG+AGG - chr6_4:1532512-1532531 None:intergenic 40.0%
ATGAGAGATATGCTCAAGAG+TGG + chr6_4:1532560-1532579 Msa0970070:CDS 40.0%
TGAGAGATATGCTCAAGAGT+GGG + chr6_4:1532561-1532580 Msa0970070:CDS 40.0%
AGTCTTTCCCGTAATTCTAC+TGG + chr6_4:1532584-1532603 Msa0970070:CDS 40.0%
ACACAATCCTAATCGTCTGA+AGG - chr6_4:1532672-1532691 None:intergenic 40.0%
!!! TTGAGTTTGCTGCGTTTTTC+GGG - chr6_4:1532740-1532759 None:intergenic 40.0%
!!! CTTGAGTTTGCTGCGTTTTT+CGG - chr6_4:1532741-1532760 None:intergenic 40.0%
CTCAAAATTCTTTGCTGCAG+CGG - chr6_4:1532822-1532841 None:intergenic 40.0%
GAGCATAGGATTGATATACC+AGG + chr6_4:1532839-1532858 Msa0970070:CDS 40.0%
CATAGGATTGATATACCAGG+TGG + chr6_4:1532842-1532861 Msa0970070:CDS 40.0%
! TTAGGGTATGTGGTTTTCTC+TGG + chr6_4:1532887-1532906 Msa0970070:CDS 40.0%
! TGTGGTTTTCTCTGGCAAAT+TGG + chr6_4:1532895-1532914 Msa0970070:CDS 40.0%
! TTTCTCTGGCAAATTGGCTT+TGG + chr6_4:1532901-1532920 Msa0970070:CDS 40.0%
TCACCTTGACGATGTTATCT+CGG + chr6_4:1533060-1533079 Msa0970070:CDS 40.0%
TTACCGAGATAACATCGTCA+AGG - chr6_4:1533066-1533085 None:intergenic 40.0%
!! CTTGTTTTCATTAGCTCTCC+GGG - chr6_4:1533218-1533237 None:intergenic 40.0%
!! GCTTGTTTTCATTAGCTCTC+CGG - chr6_4:1533219-1533238 None:intergenic 40.0%
!! CCACATGAAGCCTTTTTCAT+CGG - chr6_4:1533509-1533528 None:intergenic 40.0%
TGTGGCTTCTACAATAGAAG+AGG + chr6_4:1533577-1533596 Msa0970070:CDS 40.0%
CAATAGAAGAGGCAATTCAG+TGG + chr6_4:1533588-1533607 Msa0970070:CDS 40.0%
TTGGAAGAAACTAAAGGGTG+AGG - chr6_4:1533656-1533675 None:intergenic 40.0%
TTCCAAGAAGCAAGCATCAT+CGG + chr6_4:1533670-1533689 Msa0970070:CDS 40.0%
TCTAAAGAGCAATTCAGGAG+GGG - chr6_4:1533714-1533733 None:intergenic 40.0%
CATCTAAAGAGCAATTCAGG+AGG - chr6_4:1533716-1533735 None:intergenic 40.0%
! GTAATTTTAAACCCACGCTC+AGG + chr6_4:1533758-1533777 Msa0970070:CDS 40.0%
!! TGAATATTGGTTCCACATCG+CGG - chr6_4:1533811-1533830 None:intergenic 40.0%
CGATGTGGAACCAATATTCA+AGG + chr6_4:1533811-1533830 Msa0970070:CDS 40.0%
ACACACAGCTTACATGATTG+GGG - chr6_4:1533852-1533871 None:intergenic 40.0%
TTAATACTTCGACAGCTTGC+TGG + chr6_4:1534165-1534184 Msa0970070:intron 40.0%
!!! ACAGCTTGCTGGTTTTAGAT+TGG + chr6_4:1534176-1534195 Msa0970070:intron 40.0%
! TACAGTTGATGCAAGGTTTC+TGG - chr6_4:1534232-1534251 None:intergenic 40.0%
! TGATGTCTACAGTTGATGCA+AGG - chr6_4:1534239-1534258 None:intergenic 40.0%
! TCAATATTAGAGGGCACAGT+TGG + chr6_4:1534468-1534487 Msa0970070:intron 40.0%
TCAGGAATCATATGTGTTGG+CGG + chr6_4:1534672-1534691 Msa0970070:intron 40.0%
ACGATGTGCAGAGTCATTAA+TGG - chr6_4:1535006-1535025 None:intergenic 40.0%
!!! GAAAGTTTTGAGCCCACAAA+TGG + chr6_4:1535026-1535045 Msa0970070:intron 40.0%
!!! AAGTTTTGAGCCCACAAATG+GGG + chr6_4:1535028-1535047 Msa0970070:intron 40.0%
ACAATGTATCCCTTCCCAAT+TGG + chr6_4:1535149-1535168 Msa0970070:intron 40.0%
CAATGTATCCCTTCCCAATT+GGG + chr6_4:1535150-1535169 Msa0970070:intron 40.0%
!! TATGAGGCTTGCTATTCAAG+AGG + chr6_4:1535205-1535224 Msa0970070:intron 40.0%
AGCATTAAACAATGATCCGG+GGG + chr6_4:1535375-1535394 Msa0970070:intron 40.0%
ACTCAATCAAAAAACTCCCC+CGG - chr6_4:1535394-1535413 None:intergenic 40.0%
GAATTTCCAAACGTACACGT+TGG + chr6_4:1535493-1535512 Msa0970070:intron 40.0%
AGATAGGAGAATGGAGACTT+GGG - chr6_4:1535529-1535548 None:intergenic 40.0%
TCCTATCTGAATTTGAGGAG+AGG + chr6_4:1535541-1535560 Msa0970070:intron 40.0%
! ATGAGGCTTTTATCCCGTTA+AGG - chr6_4:1535626-1535645 None:intergenic 40.0%
AACGGGATAAAAGCCTCATA+TGG + chr6_4:1535627-1535646 Msa0970070:intron 40.0%
TTTACGTTACCTGCCATATG+AGG - chr6_4:1535643-1535662 None:intergenic 40.0%
TGACCAAATAACGTATAGCG+AGG - chr6_4:1535674-1535693 None:intergenic 40.0%
CAAAGCTTGATCCCATTATC+TGG - chr6_4:1535881-1535900 None:intergenic 40.0%
TTAATTGGGTGCTAATCCAC+AGG - chr6_4:1536047-1536066 None:intergenic 40.0%
CAGCCAATAGTGGTTAAACT+AGG - chr6_4:1536130-1536149 None:intergenic 40.0%
AGAATCAATGCAGCCAATAG+TGG - chr6_4:1536140-1536159 None:intergenic 40.0%
CGCTTTCCTCTTTCAATAAG+AGG + chr6_4:1536215-1536234 Msa0970070:intron 40.0%
TCAATTCCTGTCATAACCTC+TGG + chr6_4:1536303-1536322 Msa0970070:intron 40.0%
TGATGTTGCAGATTTAGGCA+AGG - chr6_4:1536387-1536406 None:intergenic 40.0%
! CTTCTGTTTTACCGTTACTC+AGG + chr6_4:1536476-1536495 Msa0970070:intron 40.0%
GCAAAATGCACCAGATTTGT+TGG - chr6_4:1536538-1536557 None:intergenic 40.0%
! TATATACACGCCGTTGATGA+TGG + chr6_4:1536639-1536658 Msa0970070:intron 40.0%
!! ATATACACGCCGTTGATGAT+GGG + chr6_4:1536640-1536659 Msa0970070:intron 40.0%
CCAGCTGGTATAATTCCAAT+AGG - chr6_4:1536732-1536751 None:intergenic 40.0%
CCTATTGGAATTATACCAGC+TGG + chr6_4:1536729-1536748 Msa0970070:CDS 40.0%
GTTCTGATAACTCACTGGTA+TGG + chr6_4:1536751-1536770 Msa0970070:CDS 40.0%
TAGACACATACACATGTCTC+TGG - chr6_4:1536950-1536969 None:intergenic 40.0%
CCCCTTCCATACACATTTAA+GGG - chr6_4:1537428-1537447 None:intergenic 40.0%
CCCTTAAATGTGTATGGAAG+GGG + chr6_4:1537425-1537444 Msa0970070:intron 40.0%
ACCCCTTCCATACACATTTA+AGG - chr6_4:1537429-1537448 None:intergenic 40.0%
! GTAGGAGTATATTAATGCCC+TGG + chr6_4:1537558-1537577 Msa0970070:intron 40.0%
TTCAATTTCTTGGTTCAGGG+GGG + chr6_4:1537807-1537826 Msa0970070:intron 40.0%
CAAAGACATCTGTAGCAGTA+AGG - chr6_4:1537833-1537852 None:intergenic 40.0%
!! CAGATGTCTTTGCTGTTGAA+TGG + chr6_4:1537841-1537860 Msa0970070:CDS 40.0%
ACACGGTCGCTAAAAAATTG+TGG - chr6_4:1538001-1538020 None:intergenic 40.0%
CCTTAAGCTCTTGGAATGAT+TGG - chr6_4:1538117-1538136 None:intergenic 40.0%
CCAATCATTCCAAGAGCTTA+AGG + chr6_4:1538114-1538133 Msa0970070:intron 40.0%
GGACTTTACATGGACATGTT+AGG + chr6_4:1538300-1538319 Msa0970070:intron 40.0%
AAGTAGTAATAACGTGGGTC+AGG + chr6_4:1538323-1538342 Msa0970070:intron 40.0%
AGTAGTAATAACGTGGGTCA+GGG + chr6_4:1538324-1538343 Msa0970070:intron 40.0%
GAAATTGCTGGGAAGAATTG+TGG + chr6_4:1538359-1538378 Msa0970070:intron 40.0%
CAGCAACAAAATATCGCAGT+GGG - chr6_4:1538650-1538669 None:intergenic 40.0%
TCAACTTCGTAGCTGTATCT+CGG - chr6_4:1538696-1538715 None:intergenic 40.0%
!! TCTTTCTCAGGTTTTGATGC+TGG - chr6_4:1538726-1538745 None:intergenic 40.0%
GCATCAAAACCTGAGAAAGA+AGG + chr6_4:1538726-1538745 Msa0970070:CDS 40.0%
AAACCTGAGAAAGAAGGTTC+CGG + chr6_4:1538732-1538751 Msa0970070:CDS 40.0%
AAGGGAAGTAGTTGACATGT+CGG + chr6_4:1538758-1538777 Msa0970070:CDS 40.0%
! CATCCCATCCTTATTTGATC+TGG - chr6_4:1538805-1538824 None:intergenic 40.0%
ACTCAATAATGACTCCGAGT+CGG + chr6_4:1538853-1538872 Msa0970070:CDS 40.0%
!!! GATGATAGGCGTTTTGACTT+TGG - chr6_4:1538957-1538976 None:intergenic 40.0%
AAGTCAAAACGCCTATCATC+TGG + chr6_4:1538957-1538976 Msa0970070:CDS 40.0%
TATTGCTCCTTCCAGATGAT+AGG - chr6_4:1538971-1538990 None:intergenic 40.0%
AGTTGTGGATGAATGACTTC+TGG - chr6_4:1539005-1539024 None:intergenic 40.0%
CTTGACTTAGATCTCGTTCT+TGG - chr6_4:1539053-1539072 None:intergenic 40.0%
CAAGAACGAGATCTAAGTCA+AGG + chr6_4:1539051-1539070 Msa0970070:CDS 40.0%
AGTCAAGGAATGATAGAGGA+TGG + chr6_4:1539066-1539085 Msa0970070:CDS 40.0%
GTCAAGGAATGATAGAGGAT+GGG + chr6_4:1539067-1539086 Msa0970070:CDS 40.0%
!! TTTAGAGGTATCATGTGTGG+TGG - chr6_4:1539102-1539121 None:intergenic 40.0%
!! CCATTTAGAGGTATCATGTG+TGG - chr6_4:1539105-1539124 None:intergenic 40.0%
CCACACATGATACCTCTAAA+TGG + chr6_4:1539102-1539121 Msa0970070:CDS 40.0%
AAATGCAGCGAATGATAGAG+AGG + chr6_4:1539127-1539146 Msa0970070:CDS 40.0%
! AAAACCCTATTGAGTTGCCA+GGG + chr6_4:1539231-1539250 Msa0970070:CDS 40.0%
GATCCTACTTCTGTATCATC+CGG - chr6_4:1539260-1539279 None:intergenic 40.0%
GTTTCAAAGGGACAGTTTGT+TGG + chr6_4:1539320-1539339 Msa0970070:CDS 40.0%
TTATCGTCATGCTCAGCTTT+GGG - chr6_4:1539401-1539420 None:intergenic 40.0%
TTGATCATGGTACATGGGAA+CGG + chr6_4:1539431-1539450 Msa0970070:CDS 40.0%
! CGGTAGTCTTTGAAAAAGGA+AGG - chr6_4:1539711-1539730 None:intergenic 40.0%
TACAGATGCACAAGTTACCA+GGG - chr6_4:1539856-1539875 None:intergenic 40.0%
ATACAGATGCACAAGTTACC+AGG - chr6_4:1539857-1539876 None:intergenic 40.0%
! AGATTTTACCTGCATCCGAA+GGG - chr6_4:1539908-1539927 None:intergenic 40.0%
!!! GGTGAGTTTTTTCCACTCAA+TGG + chr6_4:1539976-1539995 Msa0970070:CDS 40.0%
TGAATGACGGCAAAGGAAAG+TGG + chr6_4:1532103-1532122 Msa0970070:five_prime_UTR 45.0%
CGATCGATCCAACTCAACAA+TGG - chr6_4:1532135-1532154 None:intergenic 45.0%
GGTTAGAAAGAAAGAGTGGG+TGG + chr6_4:1532194-1532213 Msa0970070:five_prime_UTR 45.0%
! AAAGAAAGAGTGGGTGGGTT+TGG + chr6_4:1532200-1532219 Msa0970070:five_prime_UTR 45.0%
ATGATCGAACAAGCGAGGAT+CGG - chr6_4:1532318-1532337 None:intergenic 45.0%
AAGTGATGATCGAACAAGCG+AGG - chr6_4:1532323-1532342 None:intergenic 45.0%
CGATCATCACTTCTCTTCTC+TGG + chr6_4:1532331-1532350 Msa0970070:five_prime_UTR 45.0%
CATAGATCCAATCCGATCTG+AGG + chr6_4:1532447-1532466 Msa0970070:five_prime_UTR 45.0%
AATCGTCTGAAGGACTGTTG+AGG - chr6_4:1532662-1532681 None:intergenic 45.0%
CAACAGTCCTTCAGACGATT+AGG + chr6_4:1532662-1532681 Msa0970070:CDS 45.0%
!!! TGAGTTTGCTGCGTTTTTCG+GGG - chr6_4:1532739-1532758 None:intergenic 45.0%
AAACGCAGCAAACTCAAGTC+TGG + chr6_4:1532743-1532762 Msa0970070:CDS 45.0%
AGGATTGATATACCAGGTGG+AGG + chr6_4:1532845-1532864 Msa0970070:CDS 45.0%
!! CAATCCAAACAGGCTCTAGA+TGG + chr6_4:1533332-1533351 Msa0970070:intron 45.0%
GCACTCGTATCCGATGAAAA+AGG + chr6_4:1533496-1533515 Msa0970070:CDS 45.0%
CCGATGAAAAAGGCTTCATG+TGG + chr6_4:1533506-1533525 Msa0970070:CDS 45.0%
! TCGCAAGGATTTCCGTTTTG+TGG + chr6_4:1533559-1533578 Msa0970070:CDS 45.0%
TTCCGATGATGCTTGCTTCT+TGG - chr6_4:1533675-1533694 None:intergenic 45.0%
! TAAAGTTTTCCACCGCGATG+TGG + chr6_4:1533796-1533815 Msa0970070:CDS 45.0%
ACAGCTTACATGATTGGGGA+TGG - chr6_4:1533848-1533867 None:intergenic 45.0%
CGCTATCTTTGAATTTGGCG+AGG + chr6_4:1533921-1533940 Msa0970070:intron 45.0%
!!! GCTTGCTGGTTTTAGATTGG+AGG + chr6_4:1534179-1534198 Msa0970070:intron 45.0%
TGTCACTCATTGTGAAACGG+TGG + chr6_4:1534566-1534585 Msa0970070:intron 45.0%
GTCACTCATTGTGAAACGGT+GGG + chr6_4:1534567-1534586 Msa0970070:intron 45.0%
! ATCATATGTGTTGGCGGTGA+TGG + chr6_4:1534678-1534697 Msa0970070:CDS 45.0%
! TCATATGTGTTGGCGGTGAT+GGG + chr6_4:1534679-1534698 Msa0970070:CDS 45.0%
GATGGGATAATCAACGAGGT+CGG + chr6_4:1534696-1534715 Msa0970070:intron 45.0%
! TGATTTTCTCCCTGTACTGC+TGG + chr6_4:1534740-1534759 Msa0970070:intron 45.0%
CTTTCAGATACTGTCTTGCC+TGG + chr6_4:1534826-1534845 Msa0970070:intron 45.0%
!! TTGTTTTGCGCCCCATTTGT+GGG - chr6_4:1535041-1535060 None:intergenic 45.0%
GTCAAAGACCCAATTGGGAA+GGG - chr6_4:1535161-1535180 None:intergenic 45.0%
AGTCAAAGACCCAATTGGGA+AGG - chr6_4:1535162-1535181 None:intergenic 45.0%
GGGAAGTCAAAGACCCAATT+GGG - chr6_4:1535166-1535185 None:intergenic 45.0%
TGGGAAGTCAAAGACCCAAT+TGG - chr6_4:1535167-1535186 None:intergenic 45.0%
TTCAGTCCAACGTGTACGTT+TGG - chr6_4:1535502-1535521 None:intergenic 45.0%
CAGATAGGAGAATGGAGACT+TGG - chr6_4:1535530-1535549 None:intergenic 45.0%
GCCTCTCCTCAAATTCAGAT+AGG - chr6_4:1535545-1535564 None:intergenic 45.0%
GGATAAAAGCCTCATATGGC+AGG + chr6_4:1535631-1535650 Msa0970070:intron 45.0%
CAGTTTCCAGAGGTTATGAC+AGG - chr6_4:1536312-1536331 None:intergenic 45.0%
AGTGAGTTATCAGAACCAGC+TGG - chr6_4:1536747-1536766 None:intergenic 45.0%
!! AGCTGGTTCTGATAACTCAC+TGG + chr6_4:1536746-1536765 Msa0970070:CDS 45.0%
! TCACTGGTATGGACTGTTCT+TGG + chr6_4:1536762-1536781 Msa0970070:CDS 45.0%
!! AGATCCTGTTTCTGCAGCAA+TGG + chr6_4:1536791-1536810 Msa0970070:CDS 45.0%
ATAGCCATTGCTGCAGAAAC+AGG - chr6_4:1536798-1536817 None:intergenic 45.0%
TGCAGCAATGGCTATTGTGA+AGG + chr6_4:1536803-1536822 Msa0970070:CDS 45.0%
AGCATGAATCGATGACGACA+TGG - chr6_4:1537103-1537122 None:intergenic 45.0%
!! GCAGTAGGAAGCATTAGAAG+CGG + chr6_4:1537375-1537394 Msa0970070:intron 45.0%
!! CAGTAGGAAGCATTAGAAGC+GGG + chr6_4:1537376-1537395 Msa0970070:intron 45.0%
! CTCTTGGAATGATTGGCTCT+TGG - chr6_4:1538110-1538129 None:intergenic 45.0%
GTAGTAATAACGTGGGTCAG+GGG + chr6_4:1538325-1538344 Msa0970070:intron 45.0%
CCAGCAACAAAATATCGCAG+TGG - chr6_4:1538651-1538670 None:intergenic 45.0%
! CCACTGCGATATTTTGTTGC+TGG + chr6_4:1538648-1538667 Msa0970070:CDS 45.0%
AGAAAGAAGGTTCCGGTGAA+AGG + chr6_4:1538739-1538758 Msa0970070:CDS 45.0%
GAAAGAAGGTTCCGGTGAAA+GGG + chr6_4:1538740-1538759 Msa0970070:CDS 45.0%
GTCAACTACTTCCCTTTCAC+CGG - chr6_4:1538754-1538773 None:intergenic 45.0%
AAATAAGGATGGGATGCCCA+GGG + chr6_4:1538809-1538828 Msa0970070:CDS 45.0%
CTTGAAAGACTAGATGCCCT+GGG - chr6_4:1538828-1538847 None:intergenic 45.0%
ACTTGAAAGACTAGATGCCC+TGG - chr6_4:1538829-1538848 None:intergenic 45.0%
! TAGCACTGAACCTTCTGAGT+TGG + chr6_4:1538917-1538936 Msa0970070:CDS 45.0%
CAAAACGCCTATCATCTGGA+AGG + chr6_4:1538961-1538980 Msa0970070:CDS 45.0%
! CAGTTTGGAGTTGTTGACAG+AGG - chr6_4:1539029-1539048 None:intergenic 45.0%
CTCTGTCAACAACTCCAAAC+TGG + chr6_4:1539027-1539046 Msa0970070:CDS 45.0%
! TTTGGTTCAGCATCCCAGAT+AGG - chr6_4:1539182-1539201 None:intergenic 45.0%
! TCTGGGATGCTGAACCAAAA+TGG + chr6_4:1539183-1539202 Msa0970070:CDS 45.0%
CTGGGATGCTGAACCAAAAT+GGG + chr6_4:1539184-1539203 Msa0970070:CDS 45.0%
TGAACCAAAATGGGATCCAG+AGG + chr6_4:1539193-1539212 Msa0970070:CDS 45.0%
! TTAGCCTCTGGATCCCATTT+TGG - chr6_4:1539200-1539219 None:intergenic 45.0%
AATGGGATCCAGAGGCTAAT+TGG + chr6_4:1539201-1539220 Msa0970070:CDS 45.0%
ATGGGATCCAGAGGCTAATT+GGG + chr6_4:1539202-1539221 Msa0970070:CDS 45.0%
! GAAAACCCTATTGAGTTGCC+AGG + chr6_4:1539230-1539249 Msa0970070:CDS 45.0%
TACAGAAGTAGGATCCACGA+AGG + chr6_4:1539265-1539284 Msa0970070:CDS 45.0%
!!! TGCCTCGTTTTGGAGACAAA+TGG + chr6_4:1539294-1539313 Msa0970070:CDS 45.0%
!!! GCCTCGTTTTGGAGACAAAT+GGG + chr6_4:1539295-1539314 Msa0970070:CDS 45.0%
ACCCATTTGTCTCCAAAACG+AGG - chr6_4:1539299-1539318 None:intergenic 45.0%
CATGCTTGTAGAACTGTCCA+GGG + chr6_4:1539359-1539378 Msa0970070:CDS 45.0%
GTTATCGTCATGCTCAGCTT+TGG - chr6_4:1539402-1539421 None:intergenic 45.0%
! CTGCACATTCTCTTTTACCC+TGG + chr6_4:1539836-1539855 Msa0970070:intron 45.0%
! GATTTTACCTGCATCCGAAG+GGG - chr6_4:1539907-1539926 None:intergenic 45.0%
! CAGATTTTACCTGCATCCGA+AGG - chr6_4:1539909-1539928 None:intergenic 45.0%
GGTGAGTCCCATTGTTGAGT+TGG + chr6_4:1532124-1532143 Msa0970070:five_prime_UTR 50.0%
!!! CGTTTTTCGGGGAAGACGAT+AGG - chr6_4:1532728-1532747 None:intergenic 50.0%
ATCACCACTGGATGCTCGAA+TGG - chr6_4:1532789-1532808 None:intergenic 50.0%
AGCATCCAGTGGTGATCATC+AGG + chr6_4:1532793-1532812 Msa0970070:CDS 50.0%
GATTTCTCATCACCTCCACC+TGG - chr6_4:1532860-1532879 None:intergenic 50.0%
!! AGCATCGACAGCAGCTTGAT+TGG - chr6_4:1532999-1533018 None:intergenic 50.0%
! CCATCCATCTAGAGCCTGTT+TGG - chr6_4:1533339-1533358 None:intergenic 50.0%
!! CCAAACAGGCTCTAGATGGA+TGG + chr6_4:1533336-1533355 Msa0970070:intron 50.0%
AAAACCTCGAAGGAGTCGCA+AGG + chr6_4:1533544-1533563 Msa0970070:CDS 50.0%
AAATCCTTGCGACTCCTTCG+AGG - chr6_4:1533551-1533570 None:intergenic 50.0%
GAAGAGGCAATTCAGTGGGT+TGG + chr6_4:1533593-1533612 Msa0970070:CDS 50.0%
!! ATATTGGTTCCACATCGCGG+TGG - chr6_4:1533808-1533827 None:intergenic 50.0%
GCTTCCCACCATCATATACG+TGG + chr6_4:1534416-1534435 Msa0970070:intron 50.0%
!! CGGTGATGGGATAATCAACG+AGG + chr6_4:1534692-1534711 Msa0970070:CDS 50.0%
CAAGTCAAGCCAGCAGTACA+GGG - chr6_4:1534752-1534771 None:intergenic 50.0%
ACAAGTCAAGCCAGCAGTAC+AGG - chr6_4:1534753-1534772 None:intergenic 50.0%
! CAAGCCTTATCCCACGAAGT+GGG + chr6_4:1534969-1534988 Msa0970070:intron 50.0%
! AAGCCTTATCCCACGAAGTG+GGG + chr6_4:1534970-1534989 Msa0970070:intron 50.0%
!! GTTGTTTTGCGCCCCATTTG+TGG - chr6_4:1535042-1535061 None:intergenic 50.0%
CTAACTGCCACCTAAGCACT+TGG - chr6_4:1535117-1535136 None:intergenic 50.0%
AGGTGGCAGTTAGTTAGCAG+TGG + chr6_4:1535124-1535143 Msa0970070:intron 50.0%
AAAATTCGGTATCCGGCCCA+AGG + chr6_4:1535820-1535839 Msa0970070:intron 50.0%
TACCAAGGTTATCCTTGGGC+CGG - chr6_4:1535835-1535854 None:intergenic 50.0%
AGCAGGCTAAGATGAGGTCT+TGG - chr6_4:1536270-1536289 None:intergenic 50.0%
CAGCAAAGCAGGCTAAGATG+AGG - chr6_4:1536276-1536295 None:intergenic 50.0%
TTGATCAAGGGCAGCAAAGC+AGG - chr6_4:1536287-1536306 None:intergenic 50.0%
CATACACATGTCTCTGGCTG+AGG - chr6_4:1536944-1536963 None:intergenic 50.0%
! GCGACCGTGTATTAGCTCTT+AGG + chr6_4:1538011-1538030 Msa0970070:intron 50.0%
GTGAGGAGTCCTTAAGCTCT+TGG - chr6_4:1538126-1538145 None:intergenic 50.0%
CGGGGACTGAAGAAATTGCT+GGG + chr6_4:1538348-1538367 Msa0970070:intron 50.0%
AGGCACTACGTAACTGAGCA+CGG + chr6_4:1538482-1538501 Msa0970070:intron 50.0%
TCACCGGAACCTTCTTTCTC+AGG - chr6_4:1538738-1538757 None:intergenic 50.0%
CAAATAAGGATGGGATGCCC+AGG + chr6_4:1538808-1538827 Msa0970070:CDS 50.0%
ATGACTCCGAGTCGGATATC+TGG + chr6_4:1538861-1538880 Msa0970070:CDS 50.0%
TCTCCACCAGATATCCGACT+CGG - chr6_4:1538870-1538889 None:intergenic 50.0%
! GAGTGCTACTACAGGTATCC+AGG - chr6_4:1538893-1538912 None:intergenic 50.0%
! GCTAGCATGAGTGCTACTAC+AGG - chr6_4:1538901-1538920 None:intergenic 50.0%
GTTGTTGACAGAGGCAGTTG+TGG - chr6_4:1539020-1539039 None:intergenic 50.0%
GATCTCGTTCTTGGCCAGTT+TGG - chr6_4:1539044-1539063 None:intergenic 50.0%
AGGAATGATAGAGGATGGGC+TGG + chr6_4:1539071-1539090 Msa0970070:CDS 50.0%
CGCTGCATTTCCCCATTTAG+AGG - chr6_4:1539117-1539136 None:intergenic 50.0%
TCCAGAGGCTAATTGGGATG+TGG + chr6_4:1539208-1539227 Msa0970070:CDS 50.0%
! TCCACATCCCAATTAGCCTC+TGG - chr6_4:1539212-1539231 None:intergenic 50.0%
CCTACTTCTGTATCATCCGG+TGG - chr6_4:1539257-1539276 None:intergenic 50.0%
CCACCGGATGATACAGAAGT+AGG + chr6_4:1539254-1539273 Msa0970070:CDS 50.0%
AGAAGTAGGATCCACGAAGG+AGG + chr6_4:1539268-1539287 Msa0970070:CDS 50.0%
!! GGGACAGTTTGTTGGCATTC+TGG + chr6_4:1539328-1539347 Msa0970070:CDS 50.0%
CCTGGACAGTTCTACAAGCA+TGG - chr6_4:1539361-1539380 None:intergenic 50.0%
CCATGCTTGTAGAACTGTCC+AGG + chr6_4:1539358-1539377 Msa0970070:CDS 50.0%
TCATGGTACATGGGAACGGA+AGG + chr6_4:1539435-1539454 Msa0970070:CDS 50.0%
TCTGGGAAACACACTCACAG+CGG + chr6_4:1539940-1539959 Msa0970070:CDS 50.0%
AAACACACTCACAGCGGATG+TGG + chr6_4:1539946-1539965 Msa0970070:CDS 50.0%
AACACACTCACAGCGGATGT+GGG + chr6_4:1539947-1539966 Msa0970070:CDS 50.0%
CTTTGCTTCCTGAACAGTGC+AGG + chr6_4:1540013-1540032 Msa0970070:CDS 50.0%
CCAATAAGCCTGCACTGTTC+AGG - chr6_4:1540024-1540043 None:intergenic 50.0%
CCTGAACAGTGCAGGCTTAT+TGG + chr6_4:1540021-1540040 Msa0970070:CDS 50.0%
GCTCAGCTGTTACATCGACA+AGG - chr6_4:1540158-1540177 None:intergenic 50.0%
ATCGAACAAGCGAGGATCGG+TGG - chr6_4:1532315-1532334 None:intergenic 55.0%
! TGATGAGAGTCTGAGTGCCG+CGG - chr6_4:1532639-1532658 None:intergenic 55.0%
GGCATCCTGATGATCACCAC+TGG - chr6_4:1532801-1532820 None:intergenic 55.0%
!! GAGGCAATTCAGTGGGTTGG+TGG + chr6_4:1533596-1533615 Msa0970070:CDS 55.0%
TTAAACCCACGCTCAGGCAG+AGG + chr6_4:1533764-1533783 Msa0970070:CDS 55.0%
GACATCAGCACTTGCCCTGA+TGG + chr6_4:1534252-1534271 Msa0970070:CDS 55.0%
CCACTTCGTGGGATAAGGCT+TGG - chr6_4:1534971-1534990 None:intergenic 55.0%
! CCAAGCCTTATCCCACGAAG+TGG + chr6_4:1534968-1534987 Msa0970070:intron 55.0%
CTTATCCCACGAAGTGGGGT+CGG + chr6_4:1534974-1534993 Msa0970070:intron 55.0%
TGCCACCTAAGCACTTGGCA+GGG - chr6_4:1535112-1535131 None:intergenic 55.0%
ATCCGGCCCAAGGATAACCT+TGG + chr6_4:1535830-1535849 Msa0970070:intron 55.0%
GTAATAACGTGGGTCAGGGG+CGG + chr6_4:1538328-1538347 Msa0970070:intron 55.0%
TAATAACGTGGGTCAGGGGC+GGG + chr6_4:1538329-1538348 Msa0970070:intron 55.0%
GCGGGGACTGAAGAAATTGC+TGG + chr6_4:1538347-1538366 Msa0970070:intron 55.0%
ACTCCGAGTCGGATATCTGG+TGG + chr6_4:1538864-1538883 Msa0970070:CDS 55.0%
TCGGATATCTGGTGGAGACC+TGG + chr6_4:1538872-1538891 Msa0970070:CDS 55.0%
!! GAACCTTCTGAGTTGGTGCG+TGG + chr6_4:1538924-1538943 Msa0970070:CDS 55.0%
AAGCCACGCACCAACTCAGA+AGG - chr6_4:1538930-1538949 None:intergenic 55.0%
TCATCTACGCTGTCTGACCC+AGG + chr6_4:1539155-1539174 Msa0970070:CDS 55.0%
TGTCTGACCCAGGTCCTATC+TGG + chr6_4:1539165-1539184 Msa0970070:CDS 55.0%
GTCTGACCCAGGTCCTATCT+GGG + chr6_4:1539166-1539185 Msa0970070:CDS 55.0%
CAGCATCCCAGATAGGACCT+GGG - chr6_4:1539175-1539194 None:intergenic 55.0%
TCAGCATCCCAGATAGGACC+TGG - chr6_4:1539176-1539195 None:intergenic 55.0%
GTGGCCCTGGCAACTCAATA+GGG - chr6_4:1539238-1539257 None:intergenic 55.0%
! TATTGAGTTGCCAGGGCCAC+CGG + chr6_4:1539238-1539257 Msa0970070:CDS 55.0%
! AAGGAGGCTGTGCCTCGTTT+TGG + chr6_4:1539284-1539303 Msa0970070:CDS 55.0%
TAGAACTGTCCAGGGCTCTC+AGG + chr6_4:1539367-1539386 Msa0970070:CDS 55.0%
TACATGGGAACGGAAGGCTG+AGG + chr6_4:1539441-1539460 Msa0970070:CDS 55.0%
TTCAGTTCCCCTTCGGATGC+AGG + chr6_4:1539897-1539916 Msa0970070:intron 55.0%
CACAGCGGATGTGGGATTGA+TGG + chr6_4:1539955-1539974 Msa0970070:CDS 55.0%
GACGCCATTCGAGCATCCAG+TGG + chr6_4:1532782-1532801 Msa0970070:CDS 60.0%
AACGACCTCTGCCTGAGCGT+GGG - chr6_4:1533772-1533791 None:intergenic 60.0%
CGACCCCACTTCGTGGGATA+AGG - chr6_4:1534976-1534995 None:intergenic 60.0%
CTAAGCACTTGGCAGGGCAG+TGG - chr6_4:1535106-1535125 None:intergenic 60.0%
CACTGCCCTGCCAAGTGCTT+AGG + chr6_4:1535104-1535123 Msa0970070:intron 60.0%
TGCCCTGCCAAGTGCTTAGG+TGG + chr6_4:1535107-1535126 Msa0970070:intron 60.0%
CTGCCACCTAAGCACTTGGC+AGG - chr6_4:1535113-1535132 None:intergenic 60.0%
! GAGGAGAGGCGAGTCTTGTC+AGG + chr6_4:1535555-1535574 Msa0970070:intron 60.0%
CACATGTCTCTGGCTGAGGC+AGG - chr6_4:1536940-1536959 None:intergenic 60.0%
AATAACGTGGGTCAGGGGCG+GGG + chr6_4:1538330-1538349 Msa0970070:intron 60.0%
GGTGGCCCTGGCAACTCAAT+AGG - chr6_4:1539239-1539258 None:intergenic 60.0%
TCTGTATCATCCGGTGGCCC+TGG - chr6_4:1539251-1539270 None:intergenic 60.0%
AACTGTCCAGGGCTCTCAGG+TGG + chr6_4:1539370-1539389 Msa0970070:CDS 60.0%
ATCTGCCGCATCAGCAGCCG+CGG + chr6_4:1532619-1532638 Msa0970070:CDS 65.0%
GAACGACCTCTGCCTGAGCG+TGG - chr6_4:1533773-1533792 None:intergenic 65.0%
TGCAGCCGACCCCACTTCGT+GGG - chr6_4:1534982-1535001 None:intergenic 65.0%
ATGCAGCCGACCCCACTTCG+TGG - chr6_4:1534983-1535002 None:intergenic 65.0%
GCACTTGGCAGGGCAGTGGA+GGG - chr6_4:1535102-1535121 None:intergenic 65.0%
AGCACTTGGCAGGGCAGTGG+AGG - chr6_4:1535103-1535122 None:intergenic 65.0%
ACGAGGCACAGCCTCCTTCG+TGG - chr6_4:1539282-1539301 None:intergenic 65.0%
GAGCAACCACCTGAGAGCCC+TGG - chr6_4:1539379-1539398 None:intergenic 65.0%
! GAGTGCCGCGGCTGCTGATG+CGG - chr6_4:1532627-1532646 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 1532044 1540367 1532044 ID=Msa0970070;Name=Msa0970070
chr6_4 mRNA 1532044 1540367 1532044 ID=Msa0970070-mRNA-1;Parent=Msa0970070;Name=Msa0970070-mRNA-1;_AED=0.02;_eAED=0.02;_QI=516|1|1|1|1|1|8|308|778
chr6_4 exon 1532044 1533081 1532044 ID=Msa0970070-mRNA-1:exon:762;Parent=Msa0970070-mRNA-1
chr6_4 exon 1533461 1533832 1533461 ID=Msa0970070-mRNA-1:exon:763;Parent=Msa0970070-mRNA-1
chr6_4 exon 1534180 1534273 1534180 ID=Msa0970070-mRNA-1:exon:764;Parent=Msa0970070-mRNA-1
chr6_4 exon 1534676 1534713 1534676 ID=Msa0970070-mRNA-1:exon:765;Parent=Msa0970070-mRNA-1
chr6_4 exon 1536678 1536824 1536678 ID=Msa0970070-mRNA-1:exon:766;Parent=Msa0970070-mRNA-1
chr6_4 exon 1537825 1537924 1537825 ID=Msa0970070-mRNA-1:exon:767;Parent=Msa0970070-mRNA-1
chr6_4 exon 1538610 1539532 1538610 ID=Msa0970070-mRNA-1:exon:768;Parent=Msa0970070-mRNA-1
chr6_4 exon 1539919 1540367 1539919 ID=Msa0970070-mRNA-1:exon:769;Parent=Msa0970070-mRNA-1
chr6_4 five_prime_UTR 1532044 1532559 1532044 ID=Msa0970070-mRNA-1:five_prime_utr;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1532560 1533081 1532560 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1533461 1533832 1533461 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1534180 1534273 1534180 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1534676 1534713 1534676 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1536678 1536824 1536678 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1537825 1537924 1537825 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1538610 1539532 1538610 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 CDS 1539919 1540059 1539919 ID=Msa0970070-mRNA-1:cds;Parent=Msa0970070-mRNA-1
chr6_4 three_prime_UTR 1540060 1540367 1540060 ID=Msa0970070-mRNA-1:three_prime_utr;Parent=Msa0970070-mRNA-1
Gene Sequence

>Msa0970070

ATGAGAGATATGCTCAAGAGTGGGAGTCTTTCCCGTAATTCTACTGGTAGTACTAAGTCATCTGCCGCATCAGCAGCCGCGGCACTCAGACTCTCATCACCTCAACAGTCCTTCAGACGATTAGGATTGTGTTCTCAATTATCAACTGCTGGTGAACATTCTTCTCCTATCGTCTTCCCCGAAAAACGCAGCAAACTCAAGTCTGGAAAGAAGAACAGTACAGACGCCATTCGAGCATCCAGTGGTGATCATCAGGATGCCGCTGCAGCAAAGAATTTTGAGCATAGGATTGATATACCAGGTGGAGGTGATGAGAAATCTGATTTGTTAGGGTATGTGGTTTTCTCTGGCAAATTGGCTTTGGATAAAAGAAAGATTTCTGTAAATAATAATAATAACAAGACTGATGCTCAACAACAAACTTCTTTTGATACTACCAATCAAGCTGCTGTCGATGCTAAATTAACAAGTAAAGCTTTACTTTGGGGATCTCATGTGCTTCACCTTGACGATGTTATCTCGGTTTCTTATCATGCTGGTCTCAAACATTTCACAGTGCACTCGTATCCGATGAAAAAGGCTTCATGTGGTCTTTCTTGTTTTATAAAACCTCGAAGGAGTCGCAAGGATTTCCGTTTTGTGGCTTCTACAATAGAAGAGGCAATTCAGTGGGTTGGTGGATTTGCTGATCAACACTGTTTCATTAACTGTCTACCTCACCCTTTAGTTTCTTCCAAGAAGCAAGCATCATCGGAATTATTTCAGACAGATACCCCTCCTGAATTGCTCTTTAGATGTAAAACTCCGCCTAAGATGCTTGTAATTTTAAACCCACGCTCAGGCAGAGGTCGTTCAAGTAAAGTTTTCCACCGCGATGTGGAACCAATATTCAAGCTTGCTGGTTTTAGATTGGAGGTAGTTAAAACAACATCTGCTGGTCATGCCAGAAACCTTGCATCAACTGTAGACATCAGCACTTGCCCTGATGGAATCATATGTGTTGGCGGTGATGGGATAATCAACGAGGTTGTTAATGGTCTACTTAGTAGAGACAATCAAAAGGAAGGAATATCTATACCTATTGGAATTATACCAGCTGGTTCTGATAACTCACTGGTATGGACTGTTCTTGGAGTTAGAGATCCTGTTTCTGCAGCAATGGCTATTGTGAAGGGGGGCCTTACTGCTACAGATGTCTTTGCTGTTGAATGGATTCAGAATAATAAAATTCACTTTGGATTAACAGTCTCATATTATGGTTTTGTTAGTGATGTGTTGGAACTTTCTGAAAAATATCAGAAGCGCTTTGGCCCACTGCGATATTTTGTTGCTGGATTTCTCAAGTTCTTATGCTTACCGAGATACAGCTACGAAGTTGAATATCTTCCAGCATCAAAACCTGAGAAAGAAGGTTCCGGTGAAAGGGAAGTAGTTGACATGTCGGAGCTGTATACCGACATCATGACCAGATCAAATAAGGATGGGATGCCCAGGGCATCTAGTCTTTCAAGTATTGACTCAATAATGACTCCGAGTCGGATATCTGGTGGAGACCTGGATACCTGTAGTAGCACTCATGCTAGCACTGAACCTTCTGAGTTGGTGCGTGGCTTAGATCCAAAGTCAAAACGCCTATCATCTGGAAGGAGCAATATCACAGCAGAGCCAGAAGTCATTCATCCACAACTGCCTCTGTCAACAACTCCAAACTGGCCAAGAACGAGATCTAAGTCAAGGAATGATAGAGGATGGGCTGGATTGACCACCACACATGATACCTCTAAATGGGGAAATGCAGCGAATGATAGAGAGGATATATCATCTACGCTGTCTGACCCAGGTCCTATCTGGGATGCTGAACCAAAATGGGATCCAGAGGCTAATTGGGATGTGGAAAACCCTATTGAGTTGCCAGGGCCACCGGATGATACAGAAGTAGGATCCACGAAGGAGGCTGTGCCTCGTTTTGGAGACAAATGGGTTGTTTCAAAGGGACAGTTTGTTGGCATTCTGGTTTGCAACCATGCTTGTAGAACTGTCCAGGGCTCTCAGGTGGTTGCTCCCAAAGCTGAGCATGACGATAACACTCTAGATTTGATCATGGTACATGGGAACGGAAGGCTGAGGCTGTTGAGATTTTTCATACTTCTACAGATGGGTCGACATGTTTCACTGCCATATGTTGAATATGTGAAGGTAAAATCTGTCAGAATAAAGTCTGGGAAACACACTCACAGCGGATGTGGGATTGATGGTGAGTTTTTTCCACTCAATGGACAAGTAATTTCTTCTTTGCTTCCTGAACAGTGCAGGCTTATTGGTCGCTTCCGCATATGA
Protein sequence

>Msa0970070

MRDMLKSGSLSRNSTGSTKSSAASAAAALRLSSPQQSFRRLGLCSQLSTAGEHSSPIVFPEKRSKLKSGKKNSTDAIRASSGDHQDAAAAKNFEHRIDIPGGGDEKSDLLGYVVFSGKLALDKRKISVNNNNNKTDAQQQTSFDTTNQAAVDAKLTSKALLWGSHVLHLDDVISVSYHAGLKHFTVHSYPMKKASCGLSCFIKPRRSRKDFRFVASTIEEAIQWVGGFADQHCFINCLPHPLVSSKKQASSELFQTDTPPELLFRCKTPPKMLVILNPRSGRGRSSKVFHRDVEPIFKLAGFRLEVVKTTSAGHARNLASTVDISTCPDGIICVGGDGIINEVVNGLLSRDNQKEGISIPIGIIPAGSDNSLVWTVLGVRDPVSAAMAIVKGGLTATDVFAVEWIQNNKIHFGLTVSYYGFVSDVLELSEKYQKRFGPLRYFVAGFLKFLCLPRYSYEVEYLPASKPEKEGSGEREVVDMSELYTDIMTRSNKDGMPRASSLSSIDSIMTPSRISGGDLDTCSSTHASTEPSELVRGLDPKSKRLSSGRSNITAEPEVIHPQLPLSTTPNWPRTRSKSRNDRGWAGLTTTHDTSKWGNAANDREDISSTLSDPGPIWDAEPKWDPEANWDVENPIELPGPPDDTEVGSTKEAVPRFGDKWVVSKGQFVGILVCNHACRTVQGSQVVAPKAEHDDNTLDLIMVHGNGRLRLLRFFILLQMGRHVSLPYVEYVKVKSVRIKSGKHTHSGCGIDGEFFPLNGQVISSLLPEQCRLIGRFRI*