AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0970560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970560 MtrunA17_Chr6g0449521 95.216 439 21 0 1 439 1 439 0.0 839
Msa0970560 MtrunA17_Chr3g0117141 62.252 453 142 6 1 439 1 438 0.0 566
Msa0970560 MtrunA17_Chr4g0058701 56.351 433 170 7 19 439 5 430 1.35e-160 472
Msa0970560 MtrunA17_Chr1g0173521 38.600 443 249 9 3 435 24 453 7.54e-97 308
Msa0970560 MtrunA17_Chr5g0447201 38.995 418 230 7 35 435 7 416 7.02e-94 299
Msa0970560 MtrunA17_Chr4g0064311 39.655 406 220 9 37 436 106 492 4.94e-91 293
Msa0970560 MtrunA17_Chr3g0116641 36.730 422 225 9 37 436 9 410 9.15e-86 278
Msa0970560 MtrunA17_Chr8g0380141 40.896 335 152 7 1 318 1 306 2.52e-76 251
Msa0970560 MtrunA17_Chr8g0380141 51.938 129 57 2 307 435 375 498 8.45e-33 131
Msa0970560 MtrunA17_Chr7g0267991 41.194 335 152 7 1 318 1 307 3.68e-75 251
Msa0970560 MtrunA17_Chr7g0267991 55.645 124 54 1 312 435 385 507 3.41e-36 142
Msa0970560 MtrunA17_Chr1g0201161 39.104 335 163 7 1 318 1 311 9.00e-72 243
Msa0970560 MtrunA17_Chr1g0201161 51.128 133 64 1 303 435 371 502 5.62e-34 135
Msa0970560 MtrunA17_Chr7g0257731 41.313 259 132 5 188 435 1 250 6.17e-57 198
Msa0970560 MtrunA17_Chr7g0257741 38.462 143 85 2 33 175 5 144 1.84e-27 107
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0970560 AT5G40390.1 61.871 417 146 4 35 439 22 437 0.0 532
Msa0970560 AT3G57520.3 40.247 405 230 6 36 435 8 405 1.93e-97 303
Msa0970560 AT3G57520.2 40.247 405 230 6 36 435 8 405 1.74e-96 303
Msa0970560 AT3G57520.1 40.247 405 230 6 36 435 8 405 1.85e-95 304
Msa0970560 AT5G20250.3 40.541 407 224 8 37 436 9 404 6.61e-94 299
Msa0970560 AT5G20250.1 40.541 407 224 8 37 436 9 404 6.61e-94 299
Msa0970560 AT5G20250.2 40.541 407 224 8 37 436 9 404 6.61e-94 299
Msa0970560 AT5G20250.4 40.541 407 224 8 37 436 104 499 2.59e-93 300
Msa0970560 AT1G55740.1 40.000 410 228 6 36 435 8 409 1.75e-86 280
Msa0970560 AT4G01970.1 45.638 298 137 5 32 314 31 318 1.29e-79 264
Msa0970560 AT4G01970.1 45.902 122 66 0 314 435 396 517 5.11e-28 117
Msa0970560 AT4G01970.2 45.638 298 137 5 32 314 78 365 3.69e-79 263
Msa0970560 AT4G01970.2 45.902 122 66 0 314 435 443 564 4.95e-28 117

Find 227 sgRNAs with CRISPR-Local

Find 369 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GCTTCTTTCACAAGCTTAAA+TGG 0.161905 6_4:-2095150 None:intergenic
GCAAAACAATGCTCAAAATT+TGG 0.206235 6_4:+2098278 Msa0970560:three_prime_UTR
CGGAAAGACCCTTCTATTAT+TGG 0.226635 6_4:-2095012 None:intergenic
TCAGATTTGGATCCGAATTC+TGG 0.245283 6_4:-2094948 None:intergenic
GCATGCTTTATGTGGTTATT+GGG 0.247986 6_4:+2095572 Msa0970560:CDS
AAATTATCCAAATCCAAATA+AGG 0.250491 6_4:-2099488 None:intergenic
AGAGAAAAGTTTGAGTTTCT+TGG 0.254747 6_4:-2099002 None:intergenic
GGCATGCTTTATGTGGTTAT+TGG 0.256644 6_4:+2095571 Msa0970560:CDS
TGAAGGTATTCATTCTCTTT+TGG 0.267657 6_4:+2095752 Msa0970560:CDS
ATTAATCCCTTATTTGGATT+TGG 0.278300 6_4:+2099481 Msa0970560:three_prime_UTR
ACAGTGTCACTTATGTAAAT+TGG 0.279746 6_4:-2098136 None:intergenic
GCGACCAACGGTTGCTTCCT+TGG 0.286817 6_4:+2094766 Msa0970560:CDS
GTGAAGGTGTAGGGTGAATT+AGG 0.293439 6_4:-2094646 None:intergenic
AGAGACTACTATGGAGGATT+TGG 0.295523 6_4:+2095665 Msa0970560:CDS
CCTGGAATAGTGGATAAATT+TGG 0.301213 6_4:+2095231 Msa0970560:CDS
CCACAAAAGGTAAAACTAAA+AGG 0.306318 6_4:-2099513 None:intergenic
TTGAACAATGTTCAAGTTAA+GGG 0.308810 6_4:+2099451 Msa0970560:three_prime_UTR
TAACAGTACACTGGAGTTCT+TGG 0.310149 6_4:+2098803 Msa0970560:intron
ATTGAACAATGTTCAAGTTA+AGG 0.316288 6_4:+2099450 Msa0970560:three_prime_UTR
AATTCTGGAGCATGAGGAAT+TGG 0.317522 6_4:-2094933 None:intergenic
ATCCCATCATTTGTATCAAC+TGG 0.318735 6_4:-2095396 None:intergenic
TTTGGATCTGAACTCAGATT+TGG 0.318936 6_4:-2094961 None:intergenic
TCCTTGAAGTTTGCTCCTAT+TGG 0.326195 6_4:+2099109 Msa0970560:three_prime_UTR
TATATTGAACGAGAAAATAA+TGG 0.327207 6_4:-2094411 None:intergenic
CTATTACTTCCAATAATAGA+AGG 0.331760 6_4:+2095003 Msa0970560:CDS
AGGTACACCCTCAAGGAGTT+TGG 0.332883 6_4:+2095283 Msa0970560:CDS
TGAACCCCTTCAATGGGAAT+TGG 0.337541 6_4:-2098953 None:intergenic
TTCTGGTGCACTGACCCTTA+TGG 0.350986 6_4:+2097953 Msa0970560:three_prime_UTR
ACCAACACGACCAAGGGATA+TGG 0.354458 6_4:-2097662 None:intergenic
TTGGAAGAGTCTGGAATTGA+TGG 0.358916 6_4:+2095771 Msa0970560:CDS
GGGTTGCTAATTGAGAAAAT+TGG 0.361352 6_4:-2094526 None:intergenic
GGAATTGGGTCTCGGTTTCT+AGG 0.361403 6_4:-2094918 None:intergenic
GGCTTTGTCTTGATTGATGA+TGG 0.362156 6_4:+2095345 Msa0970560:CDS
GAAGTTTGCTCCTATTGGTT+TGG 0.363050 6_4:+2099114 Msa0970560:three_prime_UTR
AAGTGTGGTGGACCACTCTT+TGG 0.366323 6_4:+2094875 Msa0970560:CDS
TGAAGAAAATTATAAGTTCA+AGG 0.367655 6_4:+2095467 Msa0970560:CDS
GAGCATAGGTTTCACATCTA+AGG 0.369731 6_4:-2098213 None:intergenic
TGGGTTAGTTCCTCCTCATT+TGG 0.371549 6_4:+2095716 Msa0970560:CDS
TGACACTGAAGAAATCTCTT+TGG 0.375789 6_4:+2099030 Msa0970560:three_prime_UTR
ATGTGACTTGTCATGAATAA+TGG 0.378215 6_4:-2094241 None:intergenic
CCAAGGGCTTGTGGAATTGA+TGG 0.381460 6_4:+2099253 Msa0970560:three_prime_UTR
ATTCCTCATGCTCCAGAATT+CGG 0.382803 6_4:+2094936 Msa0970560:CDS
ACATAGGGTCGACCAGAGTT+TGG 0.384401 6_4:-2094979 None:intergenic
TGTAGCCAATATGTACCATT+TGG 0.390376 6_4:-2097980 None:intergenic
GTTGATAAGATTGTTAATAA+TGG 0.391042 6_4:+2095690 Msa0970560:CDS
AGGACAAGGGTTGACATGTT+TGG 0.391211 6_4:-2094626 None:intergenic
AGGAGTTTGGGAAGGTGTTA+AGG 0.395664 6_4:+2095296 Msa0970560:CDS
TCAGGTAAACCCTCAACATT+AGG 0.396848 6_4:-2095606 None:intergenic
ATATCTTGAGGCTCAAGAAT+TGG 0.396873 6_4:+2099177 Msa0970560:three_prime_UTR
GTGATCCAAATGGTACATAT+TGG 0.400794 6_4:+2097975 Msa0970560:three_prime_UTR
TTGGTTCAAGTTGGAATTAG+AGG 0.402809 6_4:+2099196 Msa0970560:three_prime_UTR
GTATGGTGGAAGAGTTGATT+TGG 0.408419 6_4:+2097529 Msa0970560:CDS
ACCTTCGCCACACCTTCCTT+TGG 0.409675 6_4:+2094216 None:intergenic
GGTACACCCTCAAGGAGTTT+GGG 0.410253 6_4:+2095284 Msa0970560:CDS
TCTGATGGTGGTTGTCCACC+TGG 0.410978 6_4:+2095324 Msa0970560:CDS
GGCTTCTCCACAATAGCTTC+AGG 0.416728 6_4:-2095624 None:intergenic
TAGGTCTTTGCCATTTGAAC+CGG 0.417243 6_4:-2094899 None:intergenic
CCAAATTTATCCACTATTCC+AGG 0.418373 6_4:-2095231 None:intergenic
TGCAATGATTTCATGTTGCT+TGG 0.422115 6_4:+2097631 Msa0970560:three_prime_UTR
AAAGTTTGAGTTTCTTGGCT+TGG 0.424227 6_4:-2098997 None:intergenic
AAATTTCATCCAACCAGATT+GGG 0.424792 6_4:+2098048 Msa0970560:three_prime_UTR
GTAAATTGGACCACCAGATA+TGG 0.427067 6_4:-2098122 None:intergenic
GTTACTTCCTTCACCACAAA+AGG 0.427939 6_4:-2099526 None:intergenic
GCAAAGAGACAGTCCTTAGT+TGG 0.427965 6_4:-2098238 None:intergenic
AGTTCCTAAGTGGGCCCTTA+CGG 0.430667 6_4:-2095181 None:intergenic
GAAATTTCATCCAACCAGAT+TGG 0.431512 6_4:+2098047 Msa0970560:three_prime_UTR
AATTATCCAAATCCAAATAA+GGG 0.433962 6_4:-2099487 None:intergenic
CTTTATGTGGTTATTGGGGT+GGG 0.434667 6_4:+2095577 Msa0970560:CDS
GCAACCGTTGGTCGCGGTGA+TGG 0.444073 6_4:-2094758 None:intergenic
GCAGCTTCTAGAGCCATATC+TGG 0.444683 6_4:+2098109 Msa0970560:three_prime_UTR
AGCAACATTGTCGTCTTCAC+CGG 0.448563 6_4:-2095049 None:intergenic
AGGGTTAGGTGGATTTGTTA+AGG 0.449875 6_4:+2095506 Msa0970560:CDS
GCTTTATGTGGTTATTGGGG+TGG 0.453408 6_4:+2095576 Msa0970560:CDS
TCAACATCAAAGACATTGAA+TGG 0.456353 6_4:+2098915 Msa0970560:three_prime_UTR
GTACCATTTGGATCACCATA+AGG 0.459825 6_4:-2097968 None:intergenic
CATGGCCTAGTTCTTCAAAA+TGG 0.460717 6_4:+2099326 Msa0970560:three_prime_UTR
CAAGTTGGAATTAGAGGTGC+TGG 0.461550 6_4:+2099202 Msa0970560:three_prime_UTR
TACCATTTGGATCACCATAA+GGG 0.462848 6_4:-2097967 None:intergenic
TGTGACTTGTCATGAATAAT+GGG 0.463926 6_4:-2094240 None:intergenic
TATCAACTGGATCCTCATCA+TGG 0.467773 6_4:-2095383 None:intergenic
AGCCGACATGTTGCACCCAT+TGG 0.472492 6_4:+2094811 Msa0970560:CDS
CGTTGGATTAGAGACTACTA+TGG 0.473144 6_4:+2095656 Msa0970560:CDS
CCATCAATTCCACAAGCCCT+TGG 0.473801 6_4:-2099253 None:intergenic
GATTGAAACATATCCCAATC+TGG 0.474203 6_4:-2098061 None:intergenic
GATCCAGTTGATACAAATGA+TGG 0.474958 6_4:+2095393 Msa0970560:CDS
CACCTTCCCAAACTCCTTGA+GGG 0.478180 6_4:-2095290 None:intergenic
CTTCCTTGGCTTTGAAGCCA+AGG 0.478572 6_4:+2094780 Msa0970560:CDS
ACTCTTTGGACCGGTTCAAA+TGG 0.479439 6_4:+2094889 Msa0970560:CDS
GGTGGTGGTGATGATGTTGT+CGG 0.479564 6_4:-2094605 None:intergenic
GAGATGGTGTGTGAGAAGTA+TGG 0.479595 6_4:+2097512 Msa0970560:CDS
ACCAATAGGAGCAAACTTCA+AGG 0.479631 6_4:-2099110 None:intergenic
GGTGTTAAGGATTTATCTGA+TGG 0.480877 6_4:+2095309 Msa0970560:CDS
AGCATGTTAACCAAACCAAT+AGG 0.481357 6_4:-2099124 None:intergenic
TACATTTGATCAACCAAATG+AGG 0.482023 6_4:-2095729 None:intergenic
GCCATATCCCTTGGTCGTGT+TGG 0.482382 6_4:+2097661 Msa0970560:three_prime_UTR
AGATTGTTAATAATGGTGTT+GGG 0.483181 6_4:+2095697 Msa0970560:CDS
TTTGCTGATCCTTTACATGA+TGG 0.485427 6_4:+2098256 Msa0970560:three_prime_UTR
ATATTGAACGAGAAAATAAT+GGG 0.489803 6_4:-2094410 None:intergenic
AAGATTGTTAATAATGGTGT+TGG 0.491166 6_4:+2095696 Msa0970560:CDS
CAAAGAGACAGTCCTTAGTT+GGG 0.492050 6_4:-2098237 None:intergenic
TTGGTTGATCAAATGTATGA+AGG 0.492620 6_4:+2095735 Msa0970560:CDS
CTTGGTGTGTTTAACTGTCA+AGG 0.493208 6_4:+2098821 Msa0970560:three_prime_UTR
GTCGCGGTGATGGCGGTGGA+CGG 0.493765 6_4:-2094748 None:intergenic
GAGCATGAGGAATTGGGTCT+CGG 0.494362 6_4:-2094926 None:intergenic
TGGAAGAGTCTGGAATTGAT+GGG 0.496691 6_4:+2095772 Msa0970560:CDS
AAGAATCCAATTCCCATTGA+AGG 0.497981 6_4:+2098947 Msa0970560:three_prime_UTR
TATGTGTGGCATGCTTTATG+TGG 0.498900 6_4:+2095564 Msa0970560:CDS
ATTGGAAGTAATAGAACATA+GGG 0.502654 6_4:-2094994 None:intergenic
AAAACTTGAACCCCTTCAAT+GGG 0.503707 6_4:-2098959 None:intergenic
GTTGGTCGCGGTGATGGCGG+TGG 0.505486 6_4:-2094752 None:intergenic
GACCCTTATGGTGATCCAAA+TGG 0.506665 6_4:+2097965 Msa0970560:three_prime_UTR
TGGTCCACCACACTTTGAAC+CGG 0.508752 6_4:-2094867 None:intergenic
GGGTTTACCTGAAGCTATTG+TGG 0.509769 6_4:+2095617 Msa0970560:CDS
GGCGGTGGACGGAGCAGTAG+TGG 0.510041 6_4:-2094737 None:intergenic
TGCATACAATAGCTTATGGA+TGG 0.510464 6_4:+2098024 Msa0970560:three_prime_UTR
GTAATAAGCTCAAAGTTGAA+TGG 0.510641 6_4:-2099055 None:intergenic
CATGCTTTATGTGGTTATTG+GGG 0.511194 6_4:+2095573 Msa0970560:CDS
GCTCAAGAATTGGTTCAAGT+TGG 0.516238 6_4:+2099187 Msa0970560:three_prime_UTR
TTGTCTTGATTGATGATGGT+TGG 0.518050 6_4:+2095349 Msa0970560:CDS
GACTCAACCCTAAAAGTCAA+TGG 0.518407 6_4:+2094676 Msa0970560:CDS
GGGATAAGACCTAATGTTGA+GGG 0.528869 6_4:+2095597 Msa0970560:CDS
TATTGGAAGTAATAGAACAT+AGG 0.531105 6_4:-2094995 None:intergenic
AACCTATGCTCTCCCAACTA+AGG 0.532363 6_4:+2098225 Msa0970560:three_prime_UTR
AGAATCCAATTCCCATTGAA+GGG 0.533802 6_4:+2098948 Msa0970560:three_prime_UTR
AGAGAAGATTTACCTTGTTG+AGG 0.535656 6_4:-2098303 None:intergenic
TCAGAGAAACCAAGGGCTTG+TGG 0.535956 6_4:+2099244 Msa0970560:three_prime_UTR
TCAGTATATATTCTGAGCAT+AGG 0.536150 6_4:+2099357 Msa0970560:three_prime_UTR
AAAGCTTAAAAGTTCCTAAG+TGG 0.538131 6_4:-2095191 None:intergenic
ACCGTTGGTCGCGGTGATGG+CGG 0.540186 6_4:-2094755 None:intergenic
ATTGTGCATACAATAGCTTA+TGG 0.541572 6_4:+2098020 Msa0970560:three_prime_UTR
GAGAAGCCTAAGTTAACCGT+TGG 0.542101 6_4:+2095639 Msa0970560:CDS
CTTCCTTGGCTTCAAAGCCA+AGG 0.542650 6_4:-2094783 None:intergenic
TTCCGTGCTTCTTTACAACC+CGG 0.543679 6_4:+2095030 Msa0970560:CDS
GAGATTTCTTCAGTGTCAGA+TGG 0.543709 6_4:-2099025 None:intergenic
ATAAATTTGGATGGTGTACA+TGG 0.544398 6_4:+2095244 Msa0970560:CDS
ATTCTGGAGCATGAGGAATT+GGG 0.545444 6_4:-2094932 None:intergenic
TCATCAATCAAGACAAAGCC+AGG 0.546944 6_4:-2095342 None:intergenic
TGAACAATGTTCAAGTTAAG+GGG 0.548010 6_4:+2099452 Msa0970560:three_prime_UTR
TGGTGGACCACTCTTTGGAC+CGG 0.550077 6_4:+2094880 Msa0970560:CDS
TCAGCAAGGGTGAAGGTGTA+GGG 0.550308 6_4:-2094655 None:intergenic
TTGTAATCAGTTGCTAGAGA+TGG 0.550510 6_4:+2097496 Msa0970560:intron
AAATGATGGGATTAATCGTA+CGG 0.554379 6_4:+2095407 Msa0970560:CDS
TGATGATGGATCAATAAGGC+AGG 0.555124 6_4:-2094292 None:intergenic
CATCTAAGGATGGTACCATC+AGG 0.556092 6_4:-2098199 None:intergenic
TTAGAGGTGCTGGTGAAATG+AGG 0.556129 6_4:+2099212 Msa0970560:three_prime_UTR
GCAACATTGTCGTCTTCACC+GGG 0.556448 6_4:-2095048 None:intergenic
GTCTGGAATTGATGGGGTCA+AGG 0.557415 6_4:+2095779 Msa0970560:CDS
CTGAGTTCAGATCCAAACTC+TGG 0.558518 6_4:+2094967 Msa0970560:CDS
TATCTTAAGGTACACCCTCA+AGG 0.560019 6_4:+2095276 Msa0970560:CDS
GTTAAGGATTTATCTGATGG+TGG 0.560656 6_4:+2095312 Msa0970560:CDS
ACCGCCATCACCGCGACCAA+CGG 0.560979 6_4:+2094754 Msa0970560:CDS
TTAACATGCTAAACAATGGT+GGG 0.561641 6_4:+2099137 Msa0970560:three_prime_UTR
ATTTACATAAGTGACACTGT+TGG 0.563869 6_4:+2098139 Msa0970560:three_prime_UTR
CAGGTGAACAAATGCCATGT+AGG 0.564054 6_4:+2095433 Msa0970560:CDS
GTCCTTAGTTGGGAGAGCAT+AGG 0.564841 6_4:-2098227 None:intergenic
ACACCTTCCCAAACTCCTTG+AGG 0.565200 6_4:-2095291 None:intergenic
TCTAATCCAACGGTTAACTT+AGG 0.566434 6_4:-2095645 None:intergenic
GGAACTGAAGCCATATCCCT+TGG 0.566723 6_4:+2097652 Msa0970560:three_prime_UTR
GCAAAGCTAGTTTCTTGAGA+AGG 0.568628 6_4:-2098177 None:intergenic
AAGGAAGCAACCGTTGGTCG+CGG 0.569203 6_4:-2094764 None:intergenic
GTCATGAATAATGGGACCAA+AGG 0.569704 6_4:-2094232 None:intergenic
GTTAACATGCTAAACAATGG+TGG 0.570055 6_4:+2099136 Msa0970560:three_prime_UTR
TTCCAATGGGTGCAACATGT+CGG 0.571969 6_4:-2094813 None:intergenic
AATGGTACATATTGGCTACA+AGG 0.572521 6_4:+2097983 Msa0970560:three_prime_UTR
AAGAAACTAGCTTTGCCTGA+TGG 0.579849 6_4:+2098184 Msa0970560:three_prime_UTR
TAGAGGTGCTGGTGAAATGA+GGG 0.581361 6_4:+2099213 Msa0970560:three_prime_UTR
GTCAGCAAGGGTGAAGGTGT+AGG 0.582857 6_4:-2094656 None:intergenic
TGAATAATGGGACCAAAGGA+AGG 0.583609 6_4:-2094228 None:intergenic
AAGAAGCAATGAAAACCGTA+AGG 0.584606 6_4:+2095166 Msa0970560:CDS
ACAAGGGTTGACATGTTTGG+TGG 0.585479 6_4:-2094623 None:intergenic
TGACATACCAACACGACCAA+GGG 0.587370 6_4:-2097668 None:intergenic
TATTACTTCCAATAATAGAA+GGG 0.591551 6_4:+2095004 Msa0970560:CDS
GCTTCTAGAGCCATATCTGG+TGG 0.592983 6_4:+2098112 Msa0970560:three_prime_UTR
GAATCCAATTCCCATTGAAG+GGG 0.593387 6_4:+2098949 Msa0970560:three_prime_UTR
GAAACATATCCCAATCTGGT+TGG 0.593443 6_4:-2098057 None:intergenic
TGTAGGGTGAATTAGGACAA+GGG 0.594429 6_4:-2094639 None:intergenic
TTAACTGTCAAGGAGGAGGA+TGG 0.595621 6_4:+2098831 Msa0970560:three_prime_UTR
CACCGGGTTGTAAAGAAGCA+CGG 0.598527 6_4:-2095032 None:intergenic
ATGGTGTGTGAGAAGTATGG+TGG 0.599596 6_4:+2097515 Msa0970560:CDS
AAGCTTAAAAGTTCCTAAGT+GGG 0.599630 6_4:-2095190 None:intergenic
AGGGTTGACATGTTTGGTGG+TGG 0.600592 6_4:-2094620 None:intergenic
TGCTGTTGTTTACCTTCACG+CGG 0.603434 6_4:+2095119 Msa0970560:CDS
TAATGGTGTCATTGCTAGCA+TGG 0.604270 6_4:+2097603 Msa0970560:three_prime_UTR
ATCCAGTTGATACAAATGAT+GGG 0.604370 6_4:+2095394 Msa0970560:CDS
GATCCGAATTCTGGAGCATG+AGG 0.607092 6_4:-2094939 None:intergenic
GGTTGAGTCAGCAAGGGTGA+AGG 0.611769 6_4:-2094662 None:intergenic
GGAAGAGTCTGGAATTGATG+GGG 0.612272 6_4:+2095773 Msa0970560:CDS
CAAAATTTGGAACCTCAACA+AGG 0.614177 6_4:+2098291 Msa0970560:three_prime_UTR
ATCAACTGGATCCTCATCAT+GGG 0.614547 6_4:-2095382 None:intergenic
CATAGTAGTCTCTAATCCAA+CGG 0.614623 6_4:-2095655 None:intergenic
AAAACCGTAAGGGCCCACTT+AGG 0.616253 6_4:+2095177 Msa0970560:CDS
ATGGATCATTACCCGCGTGA+AGG 0.616352 6_4:-2095131 None:intergenic
GCTGCATGAAAAGCAGCACA+AGG 0.623214 6_4:-2098091 None:intergenic
ATTTGAACCGGTCCAAAGAG+TGG 0.624496 6_4:-2094887 None:intergenic
GCATACAATAGCTTATGGAT+GGG 0.624814 6_4:+2098025 Msa0970560:three_prime_UTR
TGGGATAAGACCTAATGTTG+AGG 0.624832 6_4:+2095596 Msa0970560:CDS
TCAGTCATTTGAATATCTTG+AGG 0.626003 6_4:+2099165 Msa0970560:three_prime_UTR
TAACATGCTAAACAATGGTG+GGG 0.630874 6_4:+2099138 Msa0970560:three_prime_UTR
CACCCTCAAGGAGTTTGGGA+AGG 0.631467 6_4:+2095288 Msa0970560:CDS
AAAGCCAAGGAAGCAACCGT+TGG 0.631825 6_4:-2094770 None:intergenic
TCTATGCTTCAGAGAAACCA+AGG 0.632760 6_4:+2099236 Msa0970560:three_prime_UTR
GTGTAGGGTGAATTAGGACA+AGG 0.634595 6_4:-2094640 None:intergenic
TGGATTAGAGACTACTATGG+AGG 0.636373 6_4:+2095659 Msa0970560:CDS
GCAATCTATAGCCCATGATG+AGG 0.638656 6_4:+2095371 Msa0970560:CDS
GTGTTTAACTGTCAAGGAGG+AGG 0.640980 6_4:+2098827 Msa0970560:three_prime_UTR
ATGTTAACGTGAGAGAAGAA+TGG 0.642384 6_4:-2094499 None:intergenic
GTGACATACCAACACGACCA+AGG 0.644012 6_4:-2097669 None:intergenic
ATAGGTTTCACATCTAAGGA+TGG 0.644443 6_4:-2098209 None:intergenic
AATGGGACCAAAGGAAGGTG+TGG 0.648087 6_4:-2094223 None:intergenic
TGTGTATATATAGACTATTG+TGG 0.656122 6_4:-2094466 None:intergenic
AAAGACATTGAATGGAACAG+TGG 0.656793 6_4:+2098923 Msa0970560:three_prime_UTR
TCAGAATATATACTGAACAA+AGG 0.661288 6_4:-2099350 None:intergenic
GAACATCAGAGAGGATGACA+TGG 0.663848 6_4:-2094699 None:intergenic
ATTTGATCAACCAAATGAGG+AGG 0.664774 6_4:-2095726 None:intergenic
AGAAGCAATGAAAACCGTAA+GGG 0.665235 6_4:+2095167 Msa0970560:CDS
TAAATTTGGATGGTGTACAT+GGG 0.671606 6_4:+2095245 Msa0970560:CDS
GAATAGTGGATAAATTTGGA+TGG 0.672508 6_4:+2095235 Msa0970560:CDS
GGTGGACGGAGCAGTAGTGG+TGG 0.674246 6_4:-2094734 None:intergenic
CTATGCTTCAGAGAAACCAA+GGG 0.675724 6_4:+2099237 Msa0970560:three_prime_UTR
GTGTTGAATATGTGTATGTG+TGG 0.680768 6_4:+2095550 Msa0970560:CDS
CTGCATGAAAAGCAGCACAA+GGG 0.690767 6_4:-2098090 None:intergenic
GCTGTTGTTTACCTTCACGC+GGG 0.695165 6_4:+2095120 Msa0970560:CDS
TTGGTTAACATGCTAAACAA+TGG 0.696024 6_4:+2099133 Msa0970560:three_prime_UTR
TGGTTGTGATTCAAGTACCA+TGG 0.701385 6_4:+2099308 Msa0970560:three_prime_UTR
GGTGTGTTTAACTGTCAAGG+AGG 0.704596 6_4:+2098824 Msa0970560:three_prime_UTR
TCAATCAAGACAAAGCCAGG+TGG 0.708075 6_4:-2095339 None:intergenic
TTGGCTACAAGGATGTCACA+TGG 0.718463 6_4:+2097994 Msa0970560:three_prime_UTR

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAATAAAATAAAAAATGTG+TGG - chr6_4:2095840-2095859 None:intergenic 10.0%
!! ATTAACATAACTAATATTTA+TGG + chr6_4:2095934-2095953 Msa0970560:intron 10.0%
!!! TCTTAATTTTTAACAAATAT+AGG + chr6_4:2096195-2096214 Msa0970560:intron 10.0%
!! AACATATGATAAAAATTATT+TGG + chr6_4:2097891-2097910 Msa0970560:intron 10.0%
!! TTCAACTAAATTTATTCAAA+CGG - chr6_4:2096026-2096045 None:intergenic 15.0%
!!! TTTTTTAACTTTTGTTATGT+CGG + chr6_4:2096575-2096594 Msa0970560:intron 15.0%
!!! TTTTGTTACTAAAGTAAAAA+GGG + chr6_4:2096830-2096849 Msa0970560:intron 15.0%
!!! ATATTTAGTTTTGACATATA+TGG + chr6_4:2097464-2097483 Msa0970560:intron 15.0%
!! ATAAATTCAATTTCTCAAAT+TGG - chr6_4:2098504-2098523 None:intergenic 15.0%
!! ATATTGAACGAGAAAATAAT+GGG - chr6_4:2094413-2094432 None:intergenic 20.0%
!! TATATTGAACGAGAAAATAA+TGG - chr6_4:2094414-2094433 None:intergenic 20.0%
!! TATTACTTCCAATAATAGAA+GGG + chr6_4:2095004-2095023 Msa0970560:CDS 20.0%
!!! TCAAATTTTATTAACCTACA+TGG - chr6_4:2095450-2095469 None:intergenic 20.0%
!! TGAAGAAAATTATAAGTTCA+AGG + chr6_4:2095467-2095486 Msa0970560:CDS 20.0%
!! AAGTTCAAGGATTATAAAAA+AGG + chr6_4:2095480-2095499 Msa0970560:CDS 20.0%
!! AAGGATTATAAAAAAGGTTT+AGG + chr6_4:2095486-2095505 Msa0970560:CDS 20.0%
!! AGGATTATAAAAAAGGTTTA+GGG + chr6_4:2095487-2095506 Msa0970560:CDS 20.0%
!! TTTGTTAAGGAACTAAAAAA+AGG + chr6_4:2095519-2095538 Msa0970560:CDS 20.0%
!!! GTTGATAAGATTGTTAATAA+TGG + chr6_4:2095690-2095709 Msa0970560:CDS 20.0%
!!! GTGTTAAAAATAATTTTTGC+AGG - chr6_4:2095963-2095982 None:intergenic 20.0%
!!! ATATCATATCTATAACCTTT+TGG + chr6_4:2096647-2096666 Msa0970560:intron 20.0%
!!! TATCATATCTATAACCTTTT+GGG + chr6_4:2096648-2096667 Msa0970560:intron 20.0%
!!! CTTTTTACTTTAGTAACAAA+AGG - chr6_4:2096831-2096850 None:intergenic 20.0%
!!! CTTTTGTTACTAAAGTAAAA+AGG + chr6_4:2096829-2096848 Msa0970560:intron 20.0%
!! TTTGTTACTAAAGTAAAAAG+GGG + chr6_4:2096831-2096850 Msa0970560:intron 20.0%
!!! GTTTTTTTATTCTTCTACAA+TGG + chr6_4:2097083-2097102 Msa0970560:intron 20.0%
!!! AGTAGTTATTTAACCTTTTT+TGG + chr6_4:2097137-2097156 Msa0970560:intron 20.0%
!!! GTAGTTATTTAACCTTTTTT+GGG + chr6_4:2097138-2097157 Msa0970560:intron 20.0%
!! TAACATTTGTCACTAAAAAA+AGG + chr6_4:2097272-2097291 Msa0970560:intron 20.0%
!!! CTAAAAAAAGGTATCATTTT+TGG + chr6_4:2097284-2097303 Msa0970560:intron 20.0%
!! AAAAAACATTTCAATGGTAA+TGG + chr6_4:2097586-2097605 Msa0970560:exon 20.0%
!! TTGGTTAATTGAATTTATCT+TGG + chr6_4:2097910-2097929 Msa0970560:intron 20.0%
!! ATTTCTAATCATATCGTTAT+TGG + chr6_4:2098340-2098359 Msa0970560:intron 20.0%
!! TAATACTTATTAGTGTATTG+CGG - chr6_4:2098667-2098686 None:intergenic 20.0%
!!! CTTTTTATTAATCCCTTATT+TGG + chr6_4:2099475-2099494 Msa0970560:three_prime_UTR 20.0%
!! AATTATCCAAATCCAAATAA+GGG - chr6_4:2099490-2099509 None:intergenic 20.0%
!! AAATTATCCAAATCCAAATA+AGG - chr6_4:2099491-2099510 None:intergenic 20.0%
! TGTGTATATATAGACTATTG+TGG - chr6_4:2094469-2094488 None:intergenic 25.0%
!!! GTTGTTTTTGGTTGATTTTA+GGG - chr6_4:2094584-2094603 None:intergenic 25.0%
!!! TGTTGTTTTTGGTTGATTTT+AGG - chr6_4:2094585-2094604 None:intergenic 25.0%
!!! ATGTTTTTGAGTTTTCCAAT+GGG - chr6_4:2094829-2094848 None:intergenic 25.0%
! ATTGGAAGTAATAGAACATA+GGG - chr6_4:2094997-2095016 None:intergenic 25.0%
! TATTGGAAGTAATAGAACAT+AGG - chr6_4:2094998-2095017 None:intergenic 25.0%
! CTATTACTTCCAATAATAGA+AGG + chr6_4:2095003-2095022 Msa0970560:CDS 25.0%
!! TATAAAAAAGGTTTAGGGTT+AGG + chr6_4:2095492-2095511 Msa0970560:CDS 25.0%
! AAGATTGTTAATAATGGTGT+TGG + chr6_4:2095696-2095715 Msa0970560:CDS 25.0%
! AGATTGTTAATAATGGTGTT+GGG + chr6_4:2095697-2095716 Msa0970560:CDS 25.0%
!!! TTGATTTTTGTACATTGGTT+AGG - chr6_4:2095910-2095929 None:intergenic 25.0%
!!! TGTCATTGATTTTTGTACAT+TGG - chr6_4:2095915-2095934 None:intergenic 25.0%
! AAACTATCATGAATTGTTGA+AGG - chr6_4:2096057-2096076 None:intergenic 25.0%
! CGAATTCTCTTTCTATAAAA+AGG + chr6_4:2096237-2096256 Msa0970560:intron 25.0%
! AGTTATGAAATGACTTGAAA+TGG - chr6_4:2096297-2096316 None:intergenic 25.0%
!! CAACTTTTGTATTTCTTACT+TGG - chr6_4:2096384-2096403 None:intergenic 25.0%
! TAGATTAAGATAACGTAAGA+AGG - chr6_4:2096544-2096563 None:intergenic 25.0%
! ACGTATCACAAAAAAATGAT+AGG + chr6_4:2096599-2096618 Msa0970560:intron 25.0%
! TTACTTTAGTAACAAAAGGT+TGG - chr6_4:2096827-2096846 None:intergenic 25.0%
!!! ATTTAACCTTTTTTGGGATT+AGG + chr6_4:2097144-2097163 Msa0970560:intron 25.0%
! TCAGTGAAAAAACATTTCAA+TGG + chr6_4:2097580-2097599 Msa0970560:exon 25.0%
! ACTAGTTAAGGTTAGAAAAA+TGG - chr6_4:2097700-2097719 None:intergenic 25.0%
! TTTATCTTGGATTGAAAAAC+AGG + chr6_4:2097923-2097942 Msa0970560:intron 25.0%
!! ATTAGAAATTTCTGAAAGTG+AGG - chr6_4:2098329-2098348 None:intergenic 25.0%
! GAAATTGAATTTATATCCGT+TGG + chr6_4:2098510-2098529 Msa0970560:intron 25.0%
! TAGTAGAATTCGAAGAAATT+AGG + chr6_4:2098635-2098654 Msa0970560:intron 25.0%
! TTATCAAATAACAGCTACAT+TGG + chr6_4:2098691-2098710 Msa0970560:intron 25.0%
!!! TTGTTTTTATAACAGTACAC+TGG + chr6_4:2098794-2098813 Msa0970560:intron 25.0%
!!! TTTTTAGGAAATAAAGTGAC+AGG - chr6_4:2099088-2099107 None:intergenic 25.0%
!!! TTTTGAATATAAAGAGTGCA+TGG + chr6_4:2099288-2099307 Msa0970560:three_prime_UTR 25.0%
! TCAGAATATATACTGAACAA+AGG - chr6_4:2099353-2099372 None:intergenic 25.0%
!! ATTGAACAATGTTCAAGTTA+AGG + chr6_4:2099450-2099469 Msa0970560:three_prime_UTR 25.0%
!! TTGAACAATGTTCAAGTTAA+GGG + chr6_4:2099451-2099470 Msa0970560:three_prime_UTR 25.0%
!! ATTAATCCCTTATTTGGATT+TGG + chr6_4:2099481-2099500 Msa0970560:three_prime_UTR 25.0%
! TGTGACTTGTCATGAATAAT+GGG - chr6_4:2094243-2094262 None:intergenic 30.0%
! ATGTGACTTGTCATGAATAA+TGG - chr6_4:2094244-2094263 None:intergenic 30.0%
!!! GTTTTGATGATGGATCAATA+AGG - chr6_4:2094299-2094318 None:intergenic 30.0%
!!! TTGTGATATGGTTTTGATGA+TGG - chr6_4:2094309-2094328 None:intergenic 30.0%
!!! GCTTGTTTTGTTTTGTGATA+TGG - chr6_4:2094321-2094340 None:intergenic 30.0%
!!! TTTTGGTTGATTTTAGGGTA+GGG - chr6_4:2094579-2094598 None:intergenic 30.0%
!!! TTTTTGGTTGATTTTAGGGT+AGG - chr6_4:2094580-2094599 None:intergenic 30.0%
!!! GATGTTTTTGAGTTTTCCAA+TGG - chr6_4:2094830-2094849 None:intergenic 30.0%
! TCAACTTTACTAGCATTTTC+CGG + chr6_4:2094848-2094867 Msa0970560:CDS 30.0%
AAGCTTAAAAGTTCCTAAGT+GGG - chr6_4:2095193-2095212 None:intergenic 30.0%
AAAGCTTAAAAGTTCCTAAG+TGG - chr6_4:2095194-2095213 None:intergenic 30.0%
TTAGAAGAAAAAACTGTTCC+TGG + chr6_4:2095213-2095232 Msa0970560:CDS 30.0%
!! GAATAGTGGATAAATTTGGA+TGG + chr6_4:2095235-2095254 Msa0970560:CDS 30.0%
ATAAATTTGGATGGTGTACA+TGG + chr6_4:2095244-2095263 Msa0970560:CDS 30.0%
TAAATTTGGATGGTGTACAT+GGG + chr6_4:2095245-2095264 Msa0970560:CDS 30.0%
! ATGGGATGCATTTTATCTTA+AGG + chr6_4:2095263-2095282 Msa0970560:CDS 30.0%
! ATCCAGTTGATACAAATGAT+GGG + chr6_4:2095394-2095413 Msa0970560:CDS 30.0%
! AAATGATGGGATTAATCGTA+CGG + chr6_4:2095407-2095426 Msa0970560:CDS 30.0%
TACATTTGATCAACCAAATG+AGG - chr6_4:2095732-2095751 None:intergenic 30.0%
TTGGTTGATCAAATGTATGA+AGG + chr6_4:2095735-2095754 Msa0970560:CDS 30.0%
!!! TGAAGGTATTCATTCTCTTT+TGG + chr6_4:2095752-2095771 Msa0970560:CDS 30.0%
! GAGAATCATGATAGAGTATT+TGG + chr6_4:2096138-2096157 Msa0970560:intron 30.0%
! CTCTTTCTATAAAAAGGTGT+AGG + chr6_4:2096243-2096262 Msa0970560:intron 30.0%
! GAAATGACTTGAAATGGATT+TGG - chr6_4:2096291-2096310 None:intergenic 30.0%
CCAAAAGAGTCAAAATAGTT+AGG - chr6_4:2096904-2096923 None:intergenic 30.0%
!!! CCTAACTATTTTGACTCTTT+TGG + chr6_4:2096901-2096920 Msa0970560:intron 30.0%
!!! ACTATTTTGACTCTTTTGGT+CGG + chr6_4:2096905-2096924 Msa0970560:intron 30.0%
AGACAAATCAACACAAATGA+GGG - chr6_4:2096979-2096998 None:intergenic 30.0%
AGTTGAGAAGTTAAAAGTCT+AGG + chr6_4:2097200-2097219 Msa0970560:intron 30.0%
ACGTGTATTACTACTAGTTA+AGG - chr6_4:2097712-2097731 None:intergenic 30.0%
ATTGTGCATACAATAGCTTA+TGG + chr6_4:2098020-2098039 Msa0970560:three_prime_UTR 30.0%
AAATTTCATCCAACCAGATT+GGG + chr6_4:2098048-2098067 Msa0970560:three_prime_UTR 30.0%
!! ACAGTGTCACTTATGTAAAT+TGG - chr6_4:2098139-2098158 None:intergenic 30.0%
ATTTACATAAGTGACACTGT+TGG + chr6_4:2098139-2098158 Msa0970560:three_prime_UTR 30.0%
!! ATTGTTTTGCCATCATGTAA+AGG - chr6_4:2098268-2098287 None:intergenic 30.0%
GCAAAACAATGCTCAAAATT+TGG + chr6_4:2098278-2098297 Msa0970560:three_prime_UTR 30.0%
ATCCTCTACAATAGACTTTA+CGG + chr6_4:2098385-2098404 Msa0970560:intron 30.0%
TCAACATCAAAGACATTGAA+TGG + chr6_4:2098915-2098934 Msa0970560:three_prime_UTR 30.0%
! AGAGAAAAGTTTGAGTTTCT+TGG - chr6_4:2099005-2099024 None:intergenic 30.0%
GTAATAAGCTCAAAGTTGAA+TGG - chr6_4:2099058-2099077 None:intergenic 30.0%
TTGGTTAACATGCTAAACAA+TGG + chr6_4:2099133-2099152 Msa0970560:three_prime_UTR 30.0%
TTAACATGCTAAACAATGGT+GGG + chr6_4:2099137-2099156 Msa0970560:three_prime_UTR 30.0%
TCAGTCATTTGAATATCTTG+AGG + chr6_4:2099165-2099184 Msa0970560:three_prime_UTR 30.0%
TCAGTATATATTCTGAGCAT+AGG + chr6_4:2099357-2099376 Msa0970560:three_prime_UTR 30.0%
! TGAACAATGTTCAAGTTAAG+GGG + chr6_4:2099452-2099471 Msa0970560:three_prime_UTR 30.0%
CCACAAAAGGTAAAACTAAA+AGG - chr6_4:2099516-2099535 None:intergenic 30.0%
!!! CCTTTTAGTTTTACCTTTTG+TGG + chr6_4:2099513-2099532 Msa0970560:three_prime_UTR 30.0%
ATGTTAACGTGAGAGAAGAA+TGG - chr6_4:2094502-2094521 None:intergenic 35.0%
GGGTTGCTAATTGAGAAAAT+TGG - chr6_4:2094529-2094548 None:intergenic 35.0%
!!! GAGACATTGTTTTGAAGCTA+GGG - chr6_4:2094549-2094568 None:intergenic 35.0%
TTTGGATCTGAACTCAGATT+TGG - chr6_4:2094964-2094983 None:intergenic 35.0%
GCTTCTTTCACAAGCTTAAA+TGG - chr6_4:2095153-2095172 None:intergenic 35.0%
AAGAAGCAATGAAAACCGTA+AGG + chr6_4:2095166-2095185 Msa0970560:CDS 35.0%
AGAAGCAATGAAAACCGTAA+GGG + chr6_4:2095167-2095186 Msa0970560:CDS 35.0%
AAAAACTGTTCCTGGAATAG+TGG + chr6_4:2095221-2095240 Msa0970560:CDS 35.0%
CCAAATTTATCCACTATTCC+AGG - chr6_4:2095234-2095253 None:intergenic 35.0%
!! CCTGGAATAGTGGATAAATT+TGG + chr6_4:2095231-2095250 Msa0970560:CDS 35.0%
GGTGTTAAGGATTTATCTGA+TGG + chr6_4:2095309-2095328 Msa0970560:CDS 35.0%
GTTAAGGATTTATCTGATGG+TGG + chr6_4:2095312-2095331 Msa0970560:CDS 35.0%
!! TTGTCTTGATTGATGATGGT+TGG + chr6_4:2095349-2095368 Msa0970560:CDS 35.0%
! GATCCAGTTGATACAAATGA+TGG + chr6_4:2095393-2095412 Msa0970560:CDS 35.0%
ATCCCATCATTTGTATCAAC+TGG - chr6_4:2095399-2095418 None:intergenic 35.0%
! AAAAAAGGTTTAGGGTTAGG+TGG + chr6_4:2095495-2095514 Msa0970560:CDS 35.0%
GTGTTGAATATGTGTATGTG+TGG + chr6_4:2095550-2095569 Msa0970560:CDS 35.0%
GCATGCTTTATGTGGTTATT+GGG + chr6_4:2095572-2095591 Msa0970560:CDS 35.0%
CATGCTTTATGTGGTTATTG+GGG + chr6_4:2095573-2095592 Msa0970560:CDS 35.0%
TCTAATCCAACGGTTAACTT+AGG - chr6_4:2095648-2095667 None:intergenic 35.0%
CATAGTAGTCTCTAATCCAA+CGG - chr6_4:2095658-2095677 None:intergenic 35.0%
ATTTGATCAACCAAATGAGG+AGG - chr6_4:2095729-2095748 None:intergenic 35.0%
GTGAAATAGAAGGACTTACA+TGG - chr6_4:2095815-2095834 None:intergenic 35.0%
ATGTGTGGTTGTGAAATAGA+AGG - chr6_4:2095825-2095844 None:intergenic 35.0%
GAGACAAATCAACACAAATG+AGG - chr6_4:2096980-2096999 None:intergenic 35.0%
GAACTACCTAATCCCAAAAA+AGG - chr6_4:2097153-2097172 None:intergenic 35.0%
TTGTAATCAGTTGCTAGAGA+TGG + chr6_4:2097496-2097515 Msa0970560:intron 35.0%
TGCAATGATTTCATGTTGCT+TGG + chr6_4:2097631-2097650 Msa0970560:three_prime_UTR 35.0%
GAAAAACAGGTGATGATTTC+TGG + chr6_4:2097936-2097955 Msa0970560:intron 35.0%
TACCATTTGGATCACCATAA+GGG - chr6_4:2097970-2097989 None:intergenic 35.0%
GTGATCCAAATGGTACATAT+TGG + chr6_4:2097975-2097994 Msa0970560:three_prime_UTR 35.0%
TGTAGCCAATATGTACCATT+TGG - chr6_4:2097983-2098002 None:intergenic 35.0%
! AATGGTACATATTGGCTACA+AGG + chr6_4:2097983-2098002 Msa0970560:three_prime_UTR 35.0%
TGCATACAATAGCTTATGGA+TGG + chr6_4:2098024-2098043 Msa0970560:three_prime_UTR 35.0%
GCATACAATAGCTTATGGAT+GGG + chr6_4:2098025-2098044 Msa0970560:three_prime_UTR 35.0%
GAAATTTCATCCAACCAGAT+TGG + chr6_4:2098047-2098066 Msa0970560:three_prime_UTR 35.0%
GATTGAAACATATCCCAATC+TGG - chr6_4:2098064-2098083 None:intergenic 35.0%
TTTGCTGATCCTTTACATGA+TGG + chr6_4:2098256-2098275 Msa0970560:three_prime_UTR 35.0%
! CAAAATTTGGAACCTCAACA+AGG + chr6_4:2098291-2098310 Msa0970560:three_prime_UTR 35.0%
AGAGAAGATTTACCTTGTTG+AGG - chr6_4:2098306-2098325 None:intergenic 35.0%
AAAGTCTATTGTAGAGGATC+TGG - chr6_4:2098384-2098403 None:intergenic 35.0%
TACAATAGACTTTACGGTGA+AGG + chr6_4:2098391-2098410 Msa0970560:intron 35.0%
ACAATAGACTTTACGGTGAA+GGG + chr6_4:2098392-2098411 Msa0970560:intron 35.0%
AACTGTCTTCACAGTAAAGT+CGG + chr6_4:2098467-2098486 Msa0970560:intron 35.0%
TCCAACGAAGTCTAAGTTAT+TGG + chr6_4:2098547-2098566 Msa0970560:intron 35.0%
ACCAATAACTTAGACTTCGT+TGG - chr6_4:2098551-2098570 None:intergenic 35.0%
ATCCAATGACTTGATCTAGT+TGG + chr6_4:2098573-2098592 Msa0970560:intron 35.0%
AATGACTTGATCTAGTTGGA+GGG + chr6_4:2098577-2098596 Msa0970560:intron 35.0%
CTACTATGTTATCGCTTCTA+CGG - chr6_4:2098621-2098640 None:intergenic 35.0%
TCGTGAATCGCAGAAAATAA+TGG - chr6_4:2098754-2098773 None:intergenic 35.0%
! TGCTTCTGAGTTTTCACATT+TGG + chr6_4:2098880-2098899 Msa0970560:three_prime_UTR 35.0%
AAAGACATTGAATGGAACAG+TGG + chr6_4:2098923-2098942 Msa0970560:three_prime_UTR 35.0%
AAGAATCCAATTCCCATTGA+AGG + chr6_4:2098947-2098966 Msa0970560:three_prime_UTR 35.0%
AGAATCCAATTCCCATTGAA+GGG + chr6_4:2098948-2098967 Msa0970560:three_prime_UTR 35.0%
AAAACTTGAACCCCTTCAAT+GGG - chr6_4:2098962-2098981 None:intergenic 35.0%
AAAAACTTGAACCCCTTCAA+TGG - chr6_4:2098963-2098982 None:intergenic 35.0%
! AAAGTTTGAGTTTCTTGGCT+TGG - chr6_4:2099000-2099019 None:intergenic 35.0%
TGACACTGAAGAAATCTCTT+TGG + chr6_4:2099030-2099049 Msa0970560:three_prime_UTR 35.0%
! GCAAACTTCAAGGACTTTTT+AGG - chr6_4:2099103-2099122 None:intergenic 35.0%
AGCATGTTAACCAAACCAAT+AGG - chr6_4:2099127-2099146 None:intergenic 35.0%
GTTAACATGCTAAACAATGG+TGG + chr6_4:2099136-2099155 Msa0970560:three_prime_UTR 35.0%
TAACATGCTAAACAATGGTG+GGG + chr6_4:2099138-2099157 Msa0970560:three_prime_UTR 35.0%
ATATCTTGAGGCTCAAGAAT+TGG + chr6_4:2099177-2099196 Msa0970560:three_prime_UTR 35.0%
!! TTGGTTCAAGTTGGAATTAG+AGG + chr6_4:2099196-2099215 Msa0970560:three_prime_UTR 35.0%
!! AAGGACCATTTTGAAGAACT+AGG - chr6_4:2099334-2099353 None:intergenic 35.0%
! AGTTTTACCTTTTGTGGTGA+AGG + chr6_4:2099519-2099538 Msa0970560:three_prime_UTR 35.0%
! TGAATAATGGGACCAAAGGA+AGG - chr6_4:2094231-2094250 None:intergenic 40.0%
! GTCATGAATAATGGGACCAA+AGG - chr6_4:2094235-2094254 None:intergenic 40.0%
!! TGATGATGGATCAATAAGGC+AGG - chr6_4:2094295-2094314 None:intergenic 40.0%
!!! GGAGACATTGTTTTGAAGCT+AGG - chr6_4:2094550-2094569 None:intergenic 40.0%
!!! GTTGATTTTAGGGTAGGGTT+TGG - chr6_4:2094574-2094593 None:intergenic 40.0%
!!! GATGTTGTCGGTGTTGTTTT+TGG - chr6_4:2094596-2094615 None:intergenic 40.0%
TGTAGGGTGAATTAGGACAA+GGG - chr6_4:2094642-2094661 None:intergenic 40.0%
!!! TTTTAGGGTTGAGTCAGCAA+GGG - chr6_4:2094671-2094690 None:intergenic 40.0%
GACTCAACCCTAAAAGTCAA+TGG + chr6_4:2094676-2094695 Msa0970560:CDS 40.0%
!!! GACATGGCCATTGACTTTTA+GGG - chr6_4:2094686-2094705 None:intergenic 40.0%
!!! TGACATGGCCATTGACTTTT+AGG - chr6_4:2094687-2094706 None:intergenic 40.0%
!!! TGTTTTTGGGAACATCAGAG+AGG - chr6_4:2094711-2094730 None:intergenic 40.0%
!! GTAGTGGTGGTGATGTTTTT+GGG - chr6_4:2094724-2094743 None:intergenic 40.0%
!! AGTAGTGGTGGTGATGTTTT+TGG - chr6_4:2094725-2094744 None:intergenic 40.0%
! TAGGTCTTTGCCATTTGAAC+CGG - chr6_4:2094902-2094921 None:intergenic 40.0%
!! ATTCTGGAGCATGAGGAATT+GGG - chr6_4:2094935-2094954 None:intergenic 40.0%
!! AATTCTGGAGCATGAGGAAT+TGG - chr6_4:2094936-2094955 None:intergenic 40.0%
ATTCCTCATGCTCCAGAATT+CGG + chr6_4:2094936-2094955 Msa0970560:CDS 40.0%
TCAGATTTGGATCCGAATTC+TGG - chr6_4:2094951-2094970 None:intergenic 40.0%
CGGAAAGACCCTTCTATTAT+TGG - chr6_4:2095015-2095034 None:intergenic 40.0%
TATCTTAAGGTACACCCTCA+AGG + chr6_4:2095276-2095295 Msa0970560:CDS 40.0%
TCATCAATCAAGACAAAGCC+AGG - chr6_4:2095345-2095364 None:intergenic 40.0%
! GGCTTTGTCTTGATTGATGA+TGG + chr6_4:2095345-2095364 Msa0970560:CDS 40.0%
ATCAACTGGATCCTCATCAT+GGG - chr6_4:2095385-2095404 None:intergenic 40.0%
TATCAACTGGATCCTCATCA+TGG - chr6_4:2095386-2095405 None:intergenic 40.0%
!! AGGGTTAGGTGGATTTGTTA+AGG + chr6_4:2095506-2095525 Msa0970560:CDS 40.0%
TATGTGTGGCATGCTTTATG+TGG + chr6_4:2095564-2095583 Msa0970560:CDS 40.0%
GGCATGCTTTATGTGGTTAT+TGG + chr6_4:2095571-2095590 Msa0970560:CDS 40.0%
CTTTATGTGGTTATTGGGGT+GGG + chr6_4:2095577-2095596 Msa0970560:CDS 40.0%
TGGGATAAGACCTAATGTTG+AGG + chr6_4:2095596-2095615 Msa0970560:CDS 40.0%
GGGATAAGACCTAATGTTGA+GGG + chr6_4:2095597-2095616 Msa0970560:CDS 40.0%
TCAGGTAAACCCTCAACATT+AGG - chr6_4:2095609-2095628 None:intergenic 40.0%
! CGTTGGATTAGAGACTACTA+TGG + chr6_4:2095656-2095675 Msa0970560:CDS 40.0%
! TGGATTAGAGACTACTATGG+AGG + chr6_4:2095659-2095678 Msa0970560:CDS 40.0%
AGAGACTACTATGGAGGATT+TGG + chr6_4:2095665-2095684 Msa0970560:CDS 40.0%
!! CATTCTCTTTTGGAAGAGTC+TGG + chr6_4:2095762-2095781 Msa0970560:CDS 40.0%
! TTGGAAGAGTCTGGAATTGA+TGG + chr6_4:2095771-2095790 Msa0970560:CDS 40.0%
! TGGAAGAGTCTGGAATTGAT+GGG + chr6_4:2095772-2095791 Msa0970560:CDS 40.0%
ATCTTGACCATTGATGTGTG+TGG - chr6_4:2096762-2096781 None:intergenic 40.0%
AATGGTCAAGATTTCCCCAA+TGG + chr6_4:2096770-2096789 Msa0970560:intron 40.0%
! CATGACAGTTTTCATGTGAC+TGG - chr6_4:2097054-2097073 None:intergenic 40.0%
! GTATGGTGGAAGAGTTGATT+TGG + chr6_4:2097529-2097548 Msa0970560:CDS 40.0%
!! TAATGGTGTCATTGCTAGCA+TGG + chr6_4:2097603-2097622 Msa0970560:three_prime_UTR 40.0%
GTACCATTTGGATCACCATA+AGG - chr6_4:2097971-2097990 None:intergenic 40.0%
GAAACATATCCCAATCTGGT+TGG - chr6_4:2098060-2098079 None:intergenic 40.0%
GTAAATTGGACCACCAGATA+TGG - chr6_4:2098125-2098144 None:intergenic 40.0%
! GCAAAGCTAGTTTCTTGAGA+AGG - chr6_4:2098180-2098199 None:intergenic 40.0%
!! AAGAAACTAGCTTTGCCTGA+TGG + chr6_4:2098184-2098203 Msa0970560:three_prime_UTR 40.0%
CAAAGAGACAGTCCTTAGTT+GGG - chr6_4:2098240-2098259 None:intergenic 40.0%
CACCGTAAAGTCTATTGTAG+AGG - chr6_4:2098390-2098409 None:intergenic 40.0%
CTCCAACTAGATCAAGTCAT+TGG - chr6_4:2098578-2098597 None:intergenic 40.0%
CAATGACTTGATCTAGTTGG+AGG + chr6_4:2098576-2098595 Msa0970560:intron 40.0%
TGTTATCGCTTCTACGGAAT+TGG - chr6_4:2098615-2098634 None:intergenic 40.0%
TAACAGTACACTGGAGTTCT+TGG + chr6_4:2098803-2098822 Msa0970560:intron 40.0%
! CTTGGTGTGTTTAACTGTCA+AGG + chr6_4:2098821-2098840 Msa0970560:three_prime_UTR 40.0%
GAATCCAATTCCCATTGAAG+GGG + chr6_4:2098949-2098968 Msa0970560:three_prime_UTR 40.0%
GAGATTTCTTCAGTGTCAGA+TGG - chr6_4:2099028-2099047 None:intergenic 40.0%
! TCCTTGAAGTTTGCTCCTAT+TGG + chr6_4:2099109-2099128 Msa0970560:three_prime_UTR 40.0%
ACCAATAGGAGCAAACTTCA+AGG - chr6_4:2099113-2099132 None:intergenic 40.0%
! GAAGTTTGCTCCTATTGGTT+TGG + chr6_4:2099114-2099133 Msa0970560:three_prime_UTR 40.0%
! GCTCAAGAATTGGTTCAAGT+TGG + chr6_4:2099187-2099206 Msa0970560:three_prime_UTR 40.0%
TCTATGCTTCAGAGAAACCA+AGG + chr6_4:2099236-2099255 Msa0970560:three_prime_UTR 40.0%
CTATGCTTCAGAGAAACCAA+GGG + chr6_4:2099237-2099256 Msa0970560:three_prime_UTR 40.0%
TGGTTGTGATTCAAGTACCA+TGG + chr6_4:2099308-2099327 Msa0970560:three_prime_UTR 40.0%
!! CATTTTGAAGAACTAGGCCA+TGG - chr6_4:2099328-2099347 None:intergenic 40.0%
! CATGGCCTAGTTCTTCAAAA+TGG + chr6_4:2099326-2099345 Msa0970560:three_prime_UTR 40.0%
GTTACTTCCTTCACCACAAA+AGG - chr6_4:2099529-2099548 None:intergenic 40.0%
!!! GATTTTAGGGTAGGGTTTGG+AGG - chr6_4:2094571-2094590 None:intergenic 45.0%
ACAAGGGTTGACATGTTTGG+TGG - chr6_4:2094626-2094645 None:intergenic 45.0%
AGGACAAGGGTTGACATGTT+TGG - chr6_4:2094629-2094648 None:intergenic 45.0%
GTGTAGGGTGAATTAGGACA+AGG - chr6_4:2094643-2094662 None:intergenic 45.0%
! GTGAAGGTGTAGGGTGAATT+AGG - chr6_4:2094649-2094668 None:intergenic 45.0%
!!! CTTTTAGGGTTGAGTCAGCA+AGG - chr6_4:2094672-2094691 None:intergenic 45.0%
GAACATCAGAGAGGATGACA+TGG - chr6_4:2094702-2094721 None:intergenic 45.0%
!!! ATGTCGGCTTTTTGCTTCCT+TGG - chr6_4:2094800-2094819 None:intergenic 45.0%
TTCCAATGGGTGCAACATGT+CGG - chr6_4:2094816-2094835 None:intergenic 45.0%
! GCATTTTCCGGTTCAAAGTG+TGG + chr6_4:2094860-2094879 Msa0970560:CDS 45.0%
! TTTTCCGGTTCAAAGTGTGG+TGG + chr6_4:2094863-2094882 Msa0970560:CDS 45.0%
ATTTGAACCGGTCCAAAGAG+TGG - chr6_4:2094890-2094909 None:intergenic 45.0%
! ACTCTTTGGACCGGTTCAAA+TGG + chr6_4:2094889-2094908 Msa0970560:CDS 45.0%
CTGAGTTCAGATCCAAACTC+TGG + chr6_4:2094967-2094986 Msa0970560:CDS 45.0%
TTCCGTGCTTCTTTACAACC+CGG + chr6_4:2095030-2095049 Msa0970560:CDS 45.0%
AGCAACATTGTCGTCTTCAC+CGG - chr6_4:2095052-2095071 None:intergenic 45.0%
! TGCTGTTGTTTACCTTCACG+CGG + chr6_4:2095119-2095138 Msa0970560:CDS 45.0%
!! AGGAGTTTGGGAAGGTGTTA+AGG + chr6_4:2095296-2095315 Msa0970560:CDS 45.0%
TCAATCAAGACAAAGCCAGG+TGG - chr6_4:2095342-2095361 None:intergenic 45.0%
GCAATCTATAGCCCATGATG+AGG + chr6_4:2095371-2095390 Msa0970560:CDS 45.0%
CAGGTGAACAAATGCCATGT+AGG + chr6_4:2095433-2095452 Msa0970560:CDS 45.0%
GCTTTATGTGGTTATTGGGG+TGG + chr6_4:2095576-2095595 Msa0970560:CDS 45.0%
GGGTTTACCTGAAGCTATTG+TGG + chr6_4:2095617-2095636 Msa0970560:CDS 45.0%
GAGAAGCCTAAGTTAACCGT+TGG + chr6_4:2095639-2095658 Msa0970560:CDS 45.0%
!! TGGGTTAGTTCCTCCTCATT+TGG + chr6_4:2095716-2095735 Msa0970560:CDS 45.0%
! GGAAGAGTCTGGAATTGATG+GGG + chr6_4:2095773-2095792 Msa0970560:CDS 45.0%
!!! AACCTTTTGGGACTCCACTT+TGG + chr6_4:2096660-2096679 Msa0970560:intron 45.0%
TGGAGAAGTTATGGCACCAA+TGG - chr6_4:2096702-2096721 None:intergenic 45.0%
! TGTGTGTGGTGGAGAAGTTA+TGG - chr6_4:2096711-2096730 None:intergenic 45.0%
TGATGTGTGTGGATGTGTGT+GGG - chr6_4:2096751-2096770 None:intergenic 45.0%
TTGATGTGTGTGGATGTGTG+TGG - chr6_4:2096752-2096771 None:intergenic 45.0%
CACACATCCACACACATCAA+TGG + chr6_4:2096752-2096771 Msa0970560:intron 45.0%
GAGATGGTGTGTGAGAAGTA+TGG + chr6_4:2097512-2097531 Msa0970560:CDS 45.0%
! ATGGTGTGTGAGAAGTATGG+TGG + chr6_4:2097515-2097534 Msa0970560:CDS 45.0%
TGACATACCAACACGACCAA+GGG - chr6_4:2097671-2097690 None:intergenic 45.0%
GACCCTTATGGTGATCCAAA+TGG + chr6_4:2097965-2097984 Msa0970560:three_prime_UTR 45.0%
TTGGCTACAAGGATGTCACA+TGG + chr6_4:2097994-2098013 Msa0970560:three_prime_UTR 45.0%
CTGCATGAAAAGCAGCACAA+GGG - chr6_4:2098093-2098112 None:intergenic 45.0%
CATCTAAGGATGGTACCATC+AGG - chr6_4:2098202-2098221 None:intergenic 45.0%
AACCTATGCTCTCCCAACTA+AGG + chr6_4:2098225-2098244 Msa0970560:three_prime_UTR 45.0%
GCAAAGAGACAGTCCTTAGT+TGG - chr6_4:2098241-2098260 None:intergenic 45.0%
TTAGACTTCGTTGGAGAGTC+GGG - chr6_4:2098542-2098561 None:intergenic 45.0%
CTTAGACTTCGTTGGAGAGT+CGG - chr6_4:2098543-2098562 None:intergenic 45.0%
GGTGTGTTTAACTGTCAAGG+AGG + chr6_4:2098824-2098843 Msa0970560:three_prime_UTR 45.0%
GTGTTTAACTGTCAAGGAGG+AGG + chr6_4:2098827-2098846 Msa0970560:three_prime_UTR 45.0%
TTAACTGTCAAGGAGGAGGA+TGG + chr6_4:2098831-2098850 Msa0970560:three_prime_UTR 45.0%
TGAACCCCTTCAATGGGAAT+TGG - chr6_4:2098956-2098975 None:intergenic 45.0%
! CAAGTTGGAATTAGAGGTGC+TGG + chr6_4:2099202-2099221 Msa0970560:three_prime_UTR 45.0%
!! TTAGAGGTGCTGGTGAAATG+AGG + chr6_4:2099212-2099231 Msa0970560:three_prime_UTR 45.0%
!! TAGAGGTGCTGGTGAAATGA+GGG + chr6_4:2099213-2099232 Msa0970560:three_prime_UTR 45.0%
!!! ATTATGAATTAATTTTTTTT+TGG + chr6_4:2096172-2096191 Msa0970560:intron 5.0%
!!! ACAATTTTTATAATTTAAAA+AGG - chr6_4:2096944-2096963 None:intergenic 5.0%
AATGGGACCAAAGGAAGGTG+TGG - chr6_4:2094226-2094245 None:intergenic 50.0%
! GGTGGTGGTGATGATGTTGT+CGG - chr6_4:2094608-2094627 None:intergenic 50.0%
! AGGGTTGACATGTTTGGTGG+TGG - chr6_4:2094623-2094642 None:intergenic 50.0%
! TCAGCAAGGGTGAAGGTGTA+GGG - chr6_4:2094658-2094677 None:intergenic 50.0%
AAAGCCAAGGAAGCAACCGT+TGG - chr6_4:2094773-2094792 None:intergenic 50.0%
!! CTTCCTTGGCTTTGAAGCCA+AGG + chr6_4:2094780-2094799 Msa0970560:CDS 50.0%
CTTCCTTGGCTTCAAAGCCA+AGG - chr6_4:2094786-2094805 None:intergenic 50.0%
TGGTCCACCACACTTTGAAC+CGG - chr6_4:2094870-2094889 None:intergenic 50.0%
!! AAGTGTGGTGGACCACTCTT+TGG + chr6_4:2094875-2094894 Msa0970560:CDS 50.0%
GGAATTGGGTCTCGGTTTCT+AGG - chr6_4:2094921-2094940 None:intergenic 50.0%
GAGCATGAGGAATTGGGTCT+CGG - chr6_4:2094929-2094948 None:intergenic 50.0%
!! GATCCGAATTCTGGAGCATG+AGG - chr6_4:2094942-2094961 None:intergenic 50.0%
ACATAGGGTCGACCAGAGTT+TGG - chr6_4:2094982-2095001 None:intergenic 50.0%
CACCGGGTTGTAAAGAAGCA+CGG - chr6_4:2095035-2095054 None:intergenic 50.0%
GCAACATTGTCGTCTTCACC+GGG - chr6_4:2095051-2095070 None:intergenic 50.0%
! GCTGTTGTTTACCTTCACGC+GGG + chr6_4:2095120-2095139 Msa0970560:CDS 50.0%
ATGGATCATTACCCGCGTGA+AGG - chr6_4:2095134-2095153 None:intergenic 50.0%
AAAACCGTAAGGGCCCACTT+AGG + chr6_4:2095177-2095196 Msa0970560:CDS 50.0%
AGTTCCTAAGTGGGCCCTTA+CGG - chr6_4:2095184-2095203 None:intergenic 50.0%
AGGTACACCCTCAAGGAGTT+TGG + chr6_4:2095283-2095302 Msa0970560:CDS 50.0%
GGTACACCCTCAAGGAGTTT+GGG + chr6_4:2095284-2095303 Msa0970560:CDS 50.0%
CACCTTCCCAAACTCCTTGA+GGG - chr6_4:2095293-2095312 None:intergenic 50.0%
ACACCTTCCCAAACTCCTTG+AGG - chr6_4:2095294-2095313 None:intergenic 50.0%
GGCTTCTCCACAATAGCTTC+AGG - chr6_4:2095627-2095646 None:intergenic 50.0%
! GTCTGGAATTGATGGGGTCA+AGG + chr6_4:2095779-2095798 Msa0970560:CDS 50.0%
CACCAAAGTGGAGTCCCAAA+AGG - chr6_4:2096665-2096684 None:intergenic 50.0%
CACAAGCTATGGCACCAAAG+TGG - chr6_4:2096677-2096696 None:intergenic 50.0%
! TGCCATAGCTTGTGTGCCAT+TGG + chr6_4:2096683-2096702 Msa0970560:intron 50.0%
CACCAATGGCACACAAGCTA+TGG - chr6_4:2096793-2096812 None:intergenic 50.0%
TGTGTGATGTGTGTGTGTGG+TGG - chr6_4:2096722-2096741 None:intergenic 50.0%
GTGTGTGTGATGTGTGTGTG+TGG - chr6_4:2096725-2096744 None:intergenic 50.0%
GATTTCCCCAATGGCACCAA+TGG + chr6_4:2096779-2096798 Msa0970560:intron 50.0%
!! TGTGTGCCATTGGTGCCATT+GGG - chr6_4:2096788-2096807 None:intergenic 50.0%
!! TTGTGTGCCATTGGTGCCAT+TGG - chr6_4:2096692-2096711 None:intergenic 50.0%
! CGACATAGCTTGTGTGCCAT+TGG - chr6_4:2096798-2096817 None:intergenic 50.0%
GGAACTGAAGCCATATCCCT+TGG + chr6_4:2097652-2097671 Msa0970560:three_prime_UTR 50.0%
ACCAACACGACCAAGGGATA+TGG - chr6_4:2097665-2097684 None:intergenic 50.0%
GTGACATACCAACACGACCA+AGG - chr6_4:2097672-2097691 None:intergenic 50.0%
! TTCTGGTGCACTGACCCTTA+TGG + chr6_4:2097953-2097972 Msa0970560:three_prime_UTR 50.0%
GCTGCATGAAAAGCAGCACA+AGG - chr6_4:2098094-2098113 None:intergenic 50.0%
!! GCAGCTTCTAGAGCCATATC+TGG + chr6_4:2098109-2098128 Msa0970560:three_prime_UTR 50.0%
!! GCTTCTAGAGCCATATCTGG+TGG + chr6_4:2098112-2098131 Msa0970560:three_prime_UTR 50.0%
! GTCCTTAGTTGGGAGAGCAT+AGG - chr6_4:2098230-2098249 None:intergenic 50.0%
GAGAGTCGGGAAGATTCCAA+CGG - chr6_4:2098529-2098548 None:intergenic 50.0%
CTAGTTGGAGGGACTAGAGA+CGG + chr6_4:2098588-2098607 Msa0970560:intron 50.0%
TCAGAGAAACCAAGGGCTTG+TGG + chr6_4:2099244-2099263 Msa0970560:three_prime_UTR 50.0%
CCATCAATTCCACAAGCCCT+TGG - chr6_4:2099256-2099275 None:intergenic 50.0%
CCAAGGGCTTGTGGAATTGA+TGG + chr6_4:2099253-2099272 Msa0970560:three_prime_UTR 50.0%
! GTCAGCAAGGGTGAAGGTGT+AGG - chr6_4:2094659-2094678 None:intergenic 55.0%
GGTTGAGTCAGCAAGGGTGA+AGG - chr6_4:2094665-2094684 None:intergenic 55.0%
AAGGAAGCAACCGTTGGTCG+CGG - chr6_4:2094767-2094786 None:intergenic 55.0%
AGCCGACATGTTGCACCCAT+TGG + chr6_4:2094811-2094830 Msa0970560:CDS 55.0%
! TGGTGGACCACTCTTTGGAC+CGG + chr6_4:2094880-2094899 Msa0970560:CDS 55.0%
CACCCTCAAGGAGTTTGGGA+AGG + chr6_4:2095288-2095307 Msa0970560:CDS 55.0%
!! TCTGATGGTGGTTGTCCACC+TGG + chr6_4:2095324-2095343 Msa0970560:CDS 55.0%
GGGATTAATCGTACGGCTGC+AGG + chr6_4:2095414-2095433 Msa0970560:CDS 55.0%
!! GTGTGCCATTGGTGCCATTG+GGG - chr6_4:2096787-2096806 None:intergenic 55.0%
GCCATATCCCTTGGTCGTGT+TGG + chr6_4:2097661-2097680 Msa0970560:three_prime_UTR 55.0%
GCGACCAACGGTTGCTTCCT+TGG + chr6_4:2094766-2094785 Msa0970560:CDS 60.0%
GGTGGACGGAGCAGTAGTGG+TGG - chr6_4:2094737-2094756 None:intergenic 65.0%
ACCGCCATCACCGCGACCAA+CGG + chr6_4:2094754-2094773 Msa0970560:CDS 65.0%
! ACCGTTGGTCGCGGTGATGG+CGG - chr6_4:2094758-2094777 None:intergenic 65.0%
GCAACCGTTGGTCGCGGTGA+TGG - chr6_4:2094761-2094780 None:intergenic 65.0%
GGCGGTGGACGGAGCAGTAG+TGG - chr6_4:2094740-2094759 None:intergenic 70.0%
!! GTCGCGGTGATGGCGGTGGA+CGG - chr6_4:2094751-2094770 None:intergenic 70.0%
!! GTTGGTCGCGGTGATGGCGG+TGG - chr6_4:2094755-2094774 None:intergenic 70.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 2094222 2099601 2094222 ID=Msa0970560;Name=Msa0970560
chr6_4 mRNA 2094222 2099601 2094222 ID=Msa0970560-mRNA-1;Parent=Msa0970560;Name=Msa0970560-mRNA-1;_AED=0.02;_eAED=0.02;_QI=340|1|1|1|1|0.75|4|1257|444
chr6_4 exon 2094222 2095815 2094222 ID=Msa0970560-mRNA-1:exon:1025;Parent=Msa0970560-mRNA-1
chr6_4 exon 2097506 2097682 2097506 ID=Msa0970560-mRNA-1:exon:1026;Parent=Msa0970560-mRNA-1
chr6_4 exon 2097945 2098312 2097945 ID=Msa0970560-mRNA-1:exon:1027;Parent=Msa0970560-mRNA-1
chr6_4 exon 2098809 2099601 2098809 ID=Msa0970560-mRNA-1:exon:1028;Parent=Msa0970560-mRNA-1
chr6_4 five_prime_UTR 2094222 2094561 2094222 ID=Msa0970560-mRNA-1:five_prime_utr;Parent=Msa0970560-mRNA-1
chr6_4 CDS 2094562 2095815 2094562 ID=Msa0970560-mRNA-1:cds;Parent=Msa0970560-mRNA-1
chr6_4 CDS 2097506 2097586 2097506 ID=Msa0970560-mRNA-1:cds;Parent=Msa0970560-mRNA-1
chr6_4 three_prime_UTR 2097587 2097682 2097587 ID=Msa0970560-mRNA-1:three_prime_utr;Parent=Msa0970560-mRNA-1
chr6_4 three_prime_UTR 2097945 2098312 2097945 ID=Msa0970560-mRNA-1:three_prime_utr;Parent=Msa0970560-mRNA-1
chr6_4 three_prime_UTR 2098809 2099601 2098809 ID=Msa0970560-mRNA-1:three_prime_utr;Parent=Msa0970560-mRNA-1
Gene Sequence

>Msa0970560

ATGTCTCCTCCAAACCCTACCCTAAAATCAACCAAAAACAACACCGACAACATCATCACCACCACCAAACATGTCAACCCTTGTCCTAATTCACCCTACACCTTCACCCTTGCTGACTCAACCCTAAAAGTCAATGGCCATGTCATCCTCTCTGATGTTCCCAAAAACATCACCACCACTACTGCTCCGTCCACCGCCATCACCGCGACCAACGGTTGCTTCCTTGGCTTTGAAGCCAAGGAAGCAAAAAGCCGACATGTTGCACCCATTGGAAAACTCAAAAACATCAACTTTACTAGCATTTTCCGGTTCAAAGTGTGGTGGACCACTCTTTGGACCGGTTCAAATGGCAAAGACCTAGAAACCGAGACCCAATTCCTCATGCTCCAGAATTCGGATCCAAATCTGAGTTCAGATCCAAACTCTGGTCGACCCTATGTTCTATTACTTCCAATAATAGAAGGGTCTTTCCGTGCTTCTTTACAACCCGGTGAAGACGACAATGTTGCTGTCTGTGTCGAGAGTAGTTCAACTTTAGTAACTGACTCTCAATACAATGCTGTTGTTTACCTTCACGCGGGTAATGATCCATTTAAGCTTGTGAAAGAAGCAATGAAAACCGTAAGGGCCCACTTAGGAACTTTTAAGCTTTTAGAAGAAAAAACTGTTCCTGGAATAGTGGATAAATTTGGATGGTGTACATGGGATGCATTTTATCTTAAGGTACACCCTCAAGGAGTTTGGGAAGGTGTTAAGGATTTATCTGATGGTGGTTGTCCACCTGGCTTTGTCTTGATTGATGATGGTTGGCAATCTATAGCCCATGATGAGGATCCAGTTGATACAAATGATGGGATTAATCGTACGGCTGCAGGTGAACAAATGCCATGTAGGTTAATAAAATTTGAAGAAAATTATAAGTTCAAGGATTATAAAAAAGGTTTAGGGTTAGGTGGATTTGTTAAGGAACTAAAAAAAGGTTTTGAGAGTGTTGAATATGTGTATGTGTGGCATGCTTTATGTGGTTATTGGGGTGGGATAAGACCTAATGTTGAGGGTTTACCTGAAGCTATTGTGGAGAAGCCTAAGTTAACCGTTGGATTAGAGACTACTATGGAGGATTTGGCTGTTGATAAGATTGTTAATAATGGTGTTGGGTTAGTTCCTCCTCATTTGGTTGATCAAATGTATGAAGGTATTCATTCTCTTTTGGAAGAGTCTGGAATTGATGGGGTCAAGGTTGATGTCATCCATTTGCTAGAGATGGTGTGTGAGAAGTATGGTGGAAGAGTTGATTTGGCAAAGCATACTACAAAGCTCTCTCAACTTCAGTGA
Protein sequence

>Msa0970560

MSPPNPTLKSTKNNTDNIITTTKHVNPCPNSPYTFTLADSTLKVNGHVILSDVPKNITTTTAPSTAITATNGCFLGFEAKEAKSRHVAPIGKLKNINFTSIFRFKVWWTTLWTGSNGKDLETETQFLMLQNSDPNLSSDPNSGRPYVLLLPIIEGSFRASLQPGEDDNVAVCVESSSTLVTDSQYNAVVYLHAGNDPFKLVKEAMKTVRAHLGTFKLLEEKTVPGIVDKFGWCTWDAFYLKVHPQGVWEGVKDLSDGGCPPGFVLIDDGWQSIAHDEDPVDTNDGINRTAAGEQMPCRLIKFEENYKFKDYKKGLGLGGFVKELKKGFESVEYVYVWHALCGYWGGIRPNVEGLPEAIVEKPKLTVGLETTMEDLAVDKIVNNGVGLVPPHLVDQMYEGIHSLLEESGIDGVKVDVIHLLEMVCEKYGGRVDLAKHTTKLSQLQ*