AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0091150

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0091150 MtrunA17_Chr1g0211561 98.164 926 16 1 1 925 1 926 0.0 1880
Msa0091150 MtrunA17_Chr2g0300341 44.811 607 283 6 313 914 174 733 4.50e-178 533
Msa0091150 MtrunA17_Chr3g0136161 39.403 670 344 10 253 909 144 764 1.18e-162 494
Msa0091150 MtrunA17_Chr3g0136211 40.147 680 339 11 253 916 143 770 7.43e-160 487
Msa0091150 MtrunA17_Chr8g0369461 42.301 617 307 7 301 916 130 698 3.96e-155 473
Msa0091150 MtrunA17_Chr3g0136141 40.902 643 313 14 289 914 143 735 3.96e-151 464
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0091150 AT1G78610.1 57.424 916 273 14 49 922 10 850 0.0 954
Msa0091150 AT2G17010.1 53.669 954 351 21 5 921 4 903 0.0 913
Msa0091150 AT1G53470.1 55.408 906 329 19 49 920 11 875 0.0 907
Msa0091150 AT3G14810.1 54.153 927 308 19 49 920 11 875 0.0 903
Msa0091150 AT3G14810.2 51.456 927 298 21 49 920 11 840 0.0 827
Msa0091150 AT2G17000.1 52.059 874 338 15 56 921 36 836 0.0 818
Msa0091150 AT2G17000.2 52.059 874 338 15 56 921 36 836 0.0 818
Msa0091150 AT2G17010.2 46.893 708 266 20 4 665 3 646 0.0 549
Msa0091150 AT5G12080.1 41.981 636 316 8 276 906 143 730 1.30e-170 514
Msa0091150 AT5G12080.2 41.981 636 316 8 276 906 143 730 1.30e-170 514
Msa0091150 AT5G12080.3 41.981 636 316 8 276 906 143 730 1.30e-170 514
Msa0091150 AT5G19520.1 38.880 607 320 6 302 906 181 738 4.95e-150 461
Msa0091150 AT5G19520.2 38.880 607 320 6 302 906 181 738 4.95e-150 461
Msa0091150 AT1G49260.1 28.926 121 81 3 373 491 5 122 3.30e-11 62.8

Find 247 sgRNAs with CRISPR-Local

Find 360 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGCTCCTTCAAATAGATTTA+TGG 0.106249 1_2:+73300076 None:intergenic
TTCCAAGCCGACACGTTATT+TGG 0.141191 1_2:+73300894 None:intergenic
CCCATTATCATCAGATTTCT+TGG 0.159517 1_2:+73300968 None:intergenic
CCATTATCATACTGGTTATT+TGG 0.196571 1_2:-73299449 Msa0091150:CDS
AGAAAACACATTTCAGTCTT+TGG 0.216359 1_2:-73301697 Msa0091150:CDS
TTCTCTCCAAATCTTGTTAT+TGG 0.218451 1_2:+73302384 None:intergenic
GGTTATTTGGCTCTTGATAT+TGG 0.220545 1_2:-73299436 Msa0091150:CDS
TTTGAAGGAGCGTCTGATTC+TGG 0.222745 1_2:-73300065 Msa0091150:CDS
GGAAAATCCTCTTCCATAAA+AGG 0.232230 1_2:+73301731 None:intergenic
TGGTTTCTGATTGGGTTATT+AGG 0.232570 1_2:-73301529 Msa0091150:CDS
TAAAACTAAGTCCAGATTAA+TGG 0.259824 1_2:-73301855 Msa0091150:CDS
TCCAAGAAATCTGATGATAA+TGG 0.259886 1_2:-73300969 Msa0091150:CDS
CTCTGTGGCAGCTTAAGTTT+TGG 0.268313 1_2:-73301592 Msa0091150:CDS
AGAATTGAAAGGGTCTTTCT+AGG 0.285153 1_2:+73302772 None:intergenic
GTCTTTGGATTCTTCTTGAA+TGG 0.297980 1_2:-73301682 Msa0091150:CDS
GTCTTGGTTGCATTTATATT+CGG 0.298230 1_2:-73299369 Msa0091150:CDS
TTGTCCAGGTTAATGCCTTC+AGG 0.299126 1_2:-73299554 Msa0091150:intron
TCAATATGTGACCAAGGTTT+TGG 0.301334 1_2:-73301336 Msa0091150:CDS
AAGAAAAGAAAGTAGGTATT+TGG 0.304957 1_2:+73302685 None:intergenic
TATGAAGAGGTTAATGAATA+TGG 0.306929 1_2:-73300871 Msa0091150:CDS
ATAGTTTGCATCACAGGGTT+AGG 0.308441 1_2:+73302586 None:intergenic
AACACTCTCGGGGCCGCCTT+TGG 0.329276 1_2:-73301183 Msa0091150:CDS
CTTAGTTGCCATTATCATAC+TGG 0.329463 1_2:-73299457 Msa0091150:CDS
AATGACGACGGTCGTGATTA+GGG 0.330012 1_2:+73301990 None:intergenic
CCAAGAAATCTGATGATAAT+GGG 0.332159 1_2:-73300968 Msa0091150:CDS
TTCACGTTTAACTAAACTTT+AGG 0.333542 1_2:-73302661 Msa0091150:five_prime_UTR
CCCAAGCCAATAACAAGATT+TGG 0.335913 1_2:-73302390 Msa0091150:CDS
TATGTCATTGGACATGGATT+TGG 0.336553 1_2:-73302224 Msa0091150:CDS
GCAAATCCGCGTTGAAGAAC+TGG 0.338974 1_2:-73300034 Msa0091150:CDS
GAATGACGACGGTCGTGATT+AGG 0.339038 1_2:+73301989 None:intergenic
ATGTGAGTACATACTTTGAT+AGG 0.348611 1_2:-73301241 Msa0091150:CDS
TCCAAATCTTGTTATTGGCT+TGG 0.354363 1_2:+73302389 None:intergenic
CCAAATAACCAGTATGATAA+TGG 0.354637 1_2:+73299449 None:intergenic
GGTGAAAACTCTAGTGGTTA+AGG 0.355532 1_2:-73301282 Msa0091150:CDS
TTAGTAGCAAGGACACTGTT+AGG 0.356809 1_2:+73299083 None:intergenic
CCAAATCTTGTTATTGGCTT+GGG 0.357939 1_2:+73302390 None:intergenic
ACAATCACAAATTGAGTAGA+AGG 0.360639 1_2:-73298579 Msa0091150:exon
GGGATTGGGAATGGTGGTGG+TGG 0.363657 1_2:-73300948 Msa0091150:CDS
TGCAAAATTGTGTTTGGTTA+GGG 0.370280 1_2:-73301427 Msa0091150:CDS
TGTTCTAATATGTGGTAGAT+TGG 0.372968 1_2:-73301549 Msa0091150:CDS
AAAGAACCCTCTTTCTCAAT+AGG 0.374828 1_2:+73301477 None:intergenic
GTGCAAAATTGTGTTTGGTT+AGG 0.376067 1_2:-73301428 Msa0091150:CDS
AACCTTCCACTCTTGATGTT+AGG 0.378450 1_2:+73301053 None:intergenic
TTTATGTAAAGAGTTTCTTA+TGG 0.381078 1_2:-73298476 Msa0091150:three_prime_UTR
AAGTTTGTTCACTGCGGTTT+TGG 0.385413 1_2:+73299497 None:intergenic
CTGTTTCTTGGTGGGTACTT+TGG 0.387096 1_2:-73301312 Msa0091150:CDS
TTCACCGTTTATAGTCTTGA+AGG 0.388017 1_2:-73298817 Msa0091150:CDS
CAGCAAGGATTCGCCGTCAA+TGG 0.388996 1_2:-73302038 Msa0091150:CDS
CTGAGAAGCATAAGATTTGA+AGG 0.394553 1_2:+73302555 None:intergenic
GATCCACCGTCGCAACTAAT+CGG 0.395068 1_2:-73302280 Msa0091150:CDS
AAATCTGATGATAATGGGAT+TGG 0.402802 1_2:-73300963 Msa0091150:CDS
ATCGGGTGGGTCCATTAATC+TGG 0.405460 1_2:+73301844 None:intergenic
TGGTAGATTGGTTTCTGATT+GGG 0.406121 1_2:-73301537 Msa0091150:CDS
TGTTGGCGGTCGTGGAGAAT+AGG 0.409760 1_2:+73302481 None:intergenic
GGCTGCTGTGTTGGCGGTCG+TGG 0.411125 1_2:+73302473 None:intergenic
GGTGGGTACTTTGGTGTGGT+TGG 0.411905 1_2:-73301303 Msa0091150:CDS
ATAAATCAAAGAGTTTCTAT+TGG 0.418489 1_2:-73298405 Msa0091150:three_prime_UTR
CATCTATCTCCCACATCAAA+TGG 0.420933 1_2:+73299294 None:intergenic
GTGGTAGATTGGTTTCTGAT+TGG 0.422054 1_2:-73301538 Msa0091150:CDS
TTGAAGGAGCGTCTGATTCT+GGG 0.423129 1_2:-73300064 Msa0091150:CDS
GATCCTCTAGCTTAGCTTTG+TGG 0.429132 1_2:+73302299 None:intergenic
TTTGAGTGTTCCTTTGTTGA+GGG 0.432061 1_2:-73301621 Msa0091150:CDS
ACATGGGAGAAAGATATATC+AGG 0.439374 1_2:-73298731 Msa0091150:CDS
AATGGACCCACCCGATGAAC+CGG 0.440292 1_2:-73301837 Msa0091150:CDS
TAGGAAAGGCACTAGCTCTT+AGG 0.441340 1_2:+73301072 None:intergenic
ACTCTCGGGGCCGCCTTTGG+TGG 0.444265 1_2:-73301180 Msa0091150:CDS
TTGCTGTGTCTTCTCCGAAC+AGG 0.449131 1_2:+73302055 None:intergenic
TGTGAGCTCACAACTTGTCT+TGG 0.453149 1_2:-73299385 Msa0091150:CDS
TGATCCTTCAAGACTATAAA+CGG 0.453207 1_2:+73298813 None:intergenic
TAACAGTGTCCTTGCTACTA+AGG 0.454493 1_2:-73299081 Msa0091150:CDS
GATTAGCTTGATATCTACTA+AGG 0.455955 1_2:-73298442 Msa0091150:three_prime_UTR
TAGTTTGCATCACAGGGTTA+GGG 0.456148 1_2:+73302587 None:intergenic
GTTGGCGGTCGTGGAGAATA+GGG 0.456545 1_2:+73302482 None:intergenic
TGTCCAGGTTAATGCCTTCA+GGG 0.458204 1_2:-73299553 Msa0091150:intron
ACATGGTTAAAGTGGCAATC+TGG 0.459492 1_2:-73298779 Msa0091150:CDS
GGAATTTCCTATTGAGAAAG+AGG 0.459561 1_2:-73301484 Msa0091150:CDS
TCACAGGGTTAGGGTCTCTC+TGG 0.464016 1_2:+73302596 None:intergenic
AGCAAGGATTCGCCGTCAAT+GGG 0.468587 1_2:-73302037 Msa0091150:CDS
AGATCTTCTATCCGGTTCAT+CGG 0.470858 1_2:+73301826 None:intergenic
CTTTGAGTGTTCCTTTGTTG+AGG 0.472992 1_2:-73301622 Msa0091150:CDS
AAAACCATAAATCTATTTGA+AGG 0.473072 1_2:-73300080 Msa0091150:CDS
AAGCTGTGCAAAATTGTGTT+TGG 0.475551 1_2:-73301433 Msa0091150:CDS
TTCTATCCGGTTCATCGGGT+GGG 0.475815 1_2:+73301831 None:intergenic
CTTCATAAACAGCGTGCCTC+CGG 0.476167 1_2:-73302250 Msa0091150:CDS
CGAGTTGAAAGTTAGTTTCG+AGG 0.476779 1_2:-73302119 Msa0091150:CDS
TATATCTTTCTCCCATGTCT+TGG 0.481099 1_2:+73298736 None:intergenic
TCTCCATCACCTGCGGGTAA+TGG 0.484223 1_2:-73301968 Msa0091150:CDS
TTTCAGGTGGGGTAGCTACA+TGG 0.484332 1_2:+73299003 None:intergenic
ATTATCGTATCTCAGAAATA+CGG 0.486565 1_2:+73299121 None:intergenic
TCAATAGAATCTCCCATGTC+AGG 0.487717 1_2:+73299035 None:intergenic
CGGAAAGTTAACGCCGGTGG+AGG 0.491627 1_2:-73302164 Msa0091150:CDS
TAATGAATATGGTTCGGCAT+GGG 0.492101 1_2:-73300860 Msa0091150:CDS
TCAGTAAGGTGTTGGATAAG+AGG 0.493049 1_2:+73298332 None:intergenic
TCATCAGATTTCTTGGAAAG+TGG 0.493438 1_2:+73300975 None:intergenic
CGTCAATGGGTGAGTATGCT+CGG 0.493782 1_2:-73302024 Msa0091150:CDS
ATGTTGCTAGGCGCGGCTGC+AGG 0.494616 1_2:-73300725 Msa0091150:intron
ATCCCATTCGAATTTGAAGC+TGG 0.495504 1_2:+73302094 None:intergenic
AATGGGATTGGGAATGGTGG+TGG 0.496908 1_2:-73300951 Msa0091150:CDS
GAAAAGAGCGGCTGCTGTGT+TGG 0.498772 1_2:+73302464 None:intergenic
CTGATCGTCTTCCAGCTAGT+TGG 0.498824 1_2:-73298605 Msa0091150:CDS
TCGAAAGGCGGAAGAGGAAG+AGG 0.498977 1_2:-73301153 Msa0091150:CDS
AGAGGAAAGGCTTGCTGATG+AGG 0.500044 1_2:-73301135 Msa0091150:CDS
GGAGAATAGGGAGCTGTTCG+TGG 0.500526 1_2:+73302494 None:intergenic
GATGAACCGGATAGAAGATC+TGG 0.501788 1_2:-73301824 Msa0091150:CDS
GATCTTCTATCCGGTTCATC+GGG 0.503203 1_2:+73301827 None:intergenic
TGGAAGTTCATTCTATGAGT+TGG 0.503678 1_2:+73298756 None:intergenic
GGAGATTCGAAAGGCGGAAG+AGG 0.504692 1_2:-73301159 Msa0091150:CDS
CGGTGATATGTCATTGGACA+TGG 0.505087 1_2:-73302230 Msa0091150:CDS
AATCTGATGATAATGGGATT+GGG 0.505675 1_2:-73300962 Msa0091150:CDS
CCTCCAATGCTTCGTTTGAG+AGG 0.506341 1_2:-73301916 Msa0091150:CDS
GCACTAGCTCTTAGGTCAGC+AGG 0.507575 1_2:+73301080 None:intergenic
ATCCAAATAACGTGTCGGCT+TGG 0.507985 1_2:-73300896 Msa0091150:CDS
AACCAGCTTCAAATTCGAAT+GGG 0.508508 1_2:-73302096 Msa0091150:CDS
AAGCTGTGAACGATCCTGTT+CGG 0.508743 1_2:-73302069 Msa0091150:CDS
CCTCTCAAACGAAGCATTGG+AGG 0.508854 1_2:+73301916 None:intergenic
TCAATTGAACATGGTTAAAG+TGG 0.509960 1_2:-73298787 Msa0091150:CDS
AGGTTAATGCCTTCAGGGAG+AGG 0.510601 1_2:-73299548 Msa0091150:CDS
GTTTGTGATCGAAACACTCT+CGG 0.513851 1_2:-73301195 Msa0091150:CDS
TGCCTCCGGTGATATGTCAT+TGG 0.514202 1_2:-73302236 Msa0091150:CDS
GTGATTGTTGTCCAACTAGC+TGG 0.516994 1_2:+73298594 None:intergenic
CTTCTATCCGGTTCATCGGG+TGG 0.521257 1_2:+73301830 None:intergenic
GATGATAATGGGATTGGGAA+TGG 0.521877 1_2:-73300957 Msa0091150:CDS
TAGTAGCAAGGACACTGTTA+GGG 0.522100 1_2:+73299084 None:intergenic
GTCGCGACTCAGTAAGGTGT+TGG 0.526777 1_2:+73298324 None:intergenic
ATAAAACGCATTAAGTCCTC+AGG 0.526910 1_2:+73300122 None:intergenic
AAGAGCGGCTGCTGTGTTGG+CGG 0.527336 1_2:+73302467 None:intergenic
GTTCCTCTCAAACGAAGCAT+TGG 0.529720 1_2:+73301913 None:intergenic
AGAGGTTAATGAATATGGTT+CGG 0.532380 1_2:-73300866 Msa0091150:CDS
ATGATGACAATGGTTGATGA+AGG 0.532525 1_2:+73302866 None:intergenic
GCATGGGGCACTTACTACAT+TGG 0.533191 1_2:-73300844 Msa0091150:CDS
TAGAGAGTCGCGACTCAGTA+AGG 0.535279 1_2:+73298318 None:intergenic
ACCCGACCAGATCTTCTATC+CGG 0.536055 1_2:+73301818 None:intergenic
AAAAGAAAGTAGGTATTTGG+TGG 0.536846 1_2:+73302688 None:intergenic
GTTCAGAAGTTGCAGAATGC+CGG 0.537436 1_2:-73301113 Msa0091150:CDS
TTTCCGATTAGTTGCGACGG+TGG 0.542126 1_2:+73302277 None:intergenic
ATGGAGGAGCTTCAGAATGA+AGG 0.543397 1_2:-73302199 Msa0091150:CDS
CCACCATTACCCGCAGGTGA+TGG 0.544082 1_2:+73301965 None:intergenic
ATCTTGTTATTGGCTTGGGA+AGG 0.545695 1_2:+73302394 None:intergenic
AACTTGCCACTCTTAACCAC+AGG 0.546689 1_2:+73301005 None:intergenic
ACCGGATAGAAGATCTGGTC+GGG 0.546747 1_2:-73301819 Msa0091150:CDS
GTCTTTCTAGGACGATGTGA+GGG 0.547082 1_2:+73302784 None:intergenic
ATGATTCTTGTTCTAATATG+TGG 0.547822 1_2:-73301557 Msa0091150:CDS
CCATCACCTGCGGGTAATGG+TGG 0.548000 1_2:-73301965 Msa0091150:CDS
GGACATGGATTTGGAGATGG+AGG 0.548013 1_2:-73302215 Msa0091150:CDS
ACGACGACGTCTCCGGCCAT+AGG 0.549204 1_2:+73302442 None:intergenic
ACTACGGTAGAAATTATGTA+TGG 0.549810 1_2:+73299058 None:intergenic
CGTCATTCTCCATCACCTGC+GGG 0.550193 1_2:-73301974 Msa0091150:CDS
ACAAATCAGAAGTGAAAATG+AGG 0.550446 1_2:-73300778 Msa0091150:CDS
ACATCAAGAGTGGAAGGTTG+AGG 0.551793 1_2:-73301049 Msa0091150:CDS
AACTCGCGTTGAATCACCGT+GGG 0.553700 1_2:+73302136 None:intergenic
TTTGTGATCGAAACACTCTC+GGG 0.554279 1_2:-73301194 Msa0091150:CDS
GCCTTTCGAATCTCCACCAA+AGG 0.555304 1_2:+73301167 None:intergenic
TCTGGGATGATTGGGAGGAA+AGG 0.558110 1_2:-73301773 Msa0091150:CDS
ATGACGACGGTCGTGATTAG+GGG 0.560581 1_2:+73301991 None:intergenic
AATGAAGGTAACGTCGCTGA+CGG 0.565304 1_2:-73302184 Msa0091150:CDS
GAACCAGCTTCAAATTCGAA+TGG 0.566244 1_2:-73302097 Msa0091150:CDS
CAGTTTCATTGATAACAAGA+AGG 0.567068 1_2:-73298853 Msa0091150:CDS
ACCGTGGGAGATTCCTCCAC+CGG 0.568309 1_2:+73302151 None:intergenic
CAAATCCGCGTTGAAGAACT+GGG 0.568926 1_2:-73300033 Msa0091150:CDS
TTCCTAACATCAAGAGTGGA+AGG 0.569646 1_2:-73301055 Msa0091150:CDS
GGATTGGGAATGGTGGTGGT+GGG 0.572317 1_2:-73300947 Msa0091150:CDS
TTGATAACAAGAAGGAGCAC+TGG 0.574489 1_2:-73298845 Msa0091150:CDS
TAGAATGAACTTCCAAGACA+TGG 0.577011 1_2:-73298748 Msa0091150:CDS
TCACCTGCGGGTAATGGTGG+TGG 0.577751 1_2:-73301962 Msa0091150:CDS
ATTGGACATGGATTTGGAGA+TGG 0.578623 1_2:-73302218 Msa0091150:CDS
AATGAATATGGTTCGGCATG+GGG 0.578953 1_2:-73300859 Msa0091150:CDS
GCCTTTCCTAACATCAAGAG+TGG 0.581351 1_2:-73301059 Msa0091150:CDS
TATGTATGGCCTTAGTAGCA+AGG 0.582004 1_2:+73299072 None:intergenic
GCCTTTGGTGGAGATTCGAA+AGG 0.585486 1_2:-73301168 Msa0091150:CDS
TTCAAGACTATAAACGGTGA+AGG 0.586497 1_2:+73298819 None:intergenic
AAATCTTTCAGAATGTTGCT+AGG 0.587382 1_2:-73300737 Msa0091150:CDS
TCCACTCTTGATGTTAGGAA+AGG 0.591698 1_2:+73301058 None:intergenic
AATAGGGAGCTGTTCGTGGT+CGG 0.592308 1_2:+73302498 None:intergenic
ATGTGAAATTGATGCGACCC+AGG 0.595144 1_2:-73299274 Msa0091150:intron
CAAGAAACAGACCAAAACCT+TGG 0.596695 1_2:+73301325 None:intergenic
TCTTGGTGGGTACTTTGGTG+TGG 0.598050 1_2:-73301307 Msa0091150:CDS
TGACGACGGTCGTGATTAGG+GGG 0.598378 1_2:+73301992 None:intergenic
AAACCTTGGTCACATATTGA+AGG 0.599670 1_2:+73301339 None:intergenic
TGTAATGCATCCATTTGATG+TGG 0.600406 1_2:-73299304 Msa0091150:CDS
TTTCTACCGTAGTCCTGACA+TGG 0.601376 1_2:-73299048 Msa0091150:CDS
GATGACAATGGTTGATGAAG+GGG 0.603016 1_2:+73302868 None:intergenic
GATAATGGGATTGGGAATGG+TGG 0.603168 1_2:-73300954 Msa0091150:CDS
TTTCGAATCTCCACCAAAGG+CGG 0.604367 1_2:+73301170 None:intergenic
GGTCTTTCTAGGACGATGTG+AGG 0.605622 1_2:+73302783 None:intergenic
ACATGAGGCTACTAAGTACA+TGG 0.605980 1_2:+73298546 None:intergenic
GAATTTCCTATTGAGAAAGA+GGG 0.608181 1_2:-73301483 Msa0091150:CDS
TAATGGTGGTGGTGATTGCG+AGG 0.608218 1_2:-73301951 Msa0091150:CDS
TTAATGAATATGGTTCGGCA+TGG 0.609094 1_2:-73300861 Msa0091150:CDS
AAAAGCCCTGTGGTTAAGAG+TGG 0.609737 1_2:-73301011 Msa0091150:CDS
TTTCAGAATGTTGCTAGGCG+CGG 0.611025 1_2:-73300732 Msa0091150:CDS
AATCTCCCATGTCAGGACTA+CGG 0.611921 1_2:+73299042 None:intergenic
AAGCGCTCTCCTCTCCCTGA+AGG 0.613289 1_2:+73299539 None:intergenic
CGAGCATACTCACCCATTGA+CGG 0.614333 1_2:+73302025 None:intergenic
TGATGACAATGGTTGATGAA+GGG 0.616365 1_2:+73302867 None:intergenic
AGCTGGAAGACGATCAGAAG+TGG 0.616809 1_2:+73298611 None:intergenic
CTCATCACGAACATTGTCGC+CGG 0.617480 1_2:+73302336 None:intergenic
CATGTCCAATGACATATCAC+CGG 0.618141 1_2:+73302231 None:intergenic
AGGCGGAAGAGGAAGAGGAA+AGG 0.622102 1_2:-73301148 Msa0091150:CDS
TCGTCATTCTCCATCACCTG+CGG 0.624845 1_2:-73301975 Msa0091150:CDS
GGAAGACGATCAGAAGTGGT+AGG 0.626699 1_2:+73298615 None:intergenic
CCTCTAGCTTAGCTTTGTGG+CGG 0.631480 1_2:+73302302 None:intergenic
GTAATGCATCCATTTGATGT+GGG 0.631740 1_2:-73299303 Msa0091150:CDS
TGTCGGCTTGGAATATGAAG+AGG 0.635410 1_2:-73300884 Msa0091150:CDS
CAATCACAAATTGAGTAGAA+GGG 0.641112 1_2:-73298578 Msa0091150:exon
TTGCAGAGAGAGAGTTGTGG+TGG 0.641201 1_2:+73302922 None:intergenic
GCTCTAACATTAATGTCGAG+AGG 0.642384 1_2:+73298642 None:intergenic
AGAATGAACTTCCAAGACAT+GGG 0.642846 1_2:-73298747 Msa0091150:CDS
GTCAGCAGGTATGCTAACAC+CGG 0.644403 1_2:+73301094 None:intergenic
CTTAGTAGCCTCATGTTGCG+TGG 0.644679 1_2:-73298539 Msa0091150:three_prime_UTR
ACATAATGCCACGCAACATG+AGG 0.644692 1_2:+73298531 None:intergenic
AACCGGATAGAAGATCTGGT+CGG 0.644852 1_2:-73301820 Msa0091150:CDS
TTTGGTGGAGATTCGAAAGG+CGG 0.649479 1_2:-73301165 Msa0091150:CDS
AAGAGTGGAAGGTTGAGGAG+TGG 0.649657 1_2:-73301044 Msa0091150:CDS
CCTGCTAAAATGTAACACTT+CGG 0.652616 1_2:+73298505 None:intergenic
TGTCCTTCAATATGTGACCA+AGG 0.652704 1_2:-73301342 Msa0091150:CDS
GCCGGTGGAGGAATCTCCCA+CGG 0.653244 1_2:-73302152 Msa0091150:CDS
TGACGGAAAGTTAACGCCGG+TGG 0.654507 1_2:-73302167 Msa0091150:CDS
TGTTCGGAGAAGACACAGCA+AGG 0.654791 1_2:-73302053 Msa0091150:CDS
TCACCACCACCATTACCCGC+AGG 0.654875 1_2:+73301959 None:intergenic
CCGCCACAAAGCTAAGCTAG+AGG 0.656696 1_2:-73302302 Msa0091150:CDS
GTGAAAATCAACGACGACGG+CGG 0.662140 1_2:-73302421 Msa0091150:CDS
GCTGAATCCAAATAACGTGT+CGG 0.662469 1_2:-73300901 Msa0091150:CDS
TTCTACCGTAGTCCTGACAT+GGG 0.663692 1_2:-73299047 Msa0091150:CDS
GGATCACGATCAATTGAACA+TGG 0.664955 1_2:-73298796 Msa0091150:CDS
CTGCAGGTTTATATATCCTG+AGG 0.668623 1_2:-73300138 Msa0091150:intron
TAATGTCGAGAGGCATGAGA+CGG 0.670724 1_2:+73298652 None:intergenic
TCTTTCTAGGACGATGTGAG+GGG 0.678504 1_2:+73302785 None:intergenic
GTGGTTGGTGAAAACTCTAG+TGG 0.683918 1_2:-73301288 Msa0091150:CDS
ATCGTATCTCAGAAATACGG+TGG 0.688391 1_2:+73299124 None:intergenic
GTCCAATGACATATCACCGG+AGG 0.689612 1_2:+73302234 None:intergenic
TCGATGAAGTTTGTTCACTG+CGG 0.690334 1_2:+73299491 None:intergenic
TGGGAGAAAGATATATCAGG+AGG 0.691880 1_2:-73298728 Msa0091150:CDS
CGCTGACGGAAAGTTAACGC+CGG 0.693881 1_2:-73302170 Msa0091150:CDS
ACTTGCCACTCTTAACCACA+GGG 0.694699 1_2:+73301006 None:intergenic
GGATTGCAGAGAGAGAGTTG+TGG 0.697383 1_2:+73302919 None:intergenic
CTCCGGCCATAGGAAAAGAG+CGG 0.698377 1_2:+73302452 None:intergenic
TTGTGATCGAAACACTCTCG+GGG 0.699008 1_2:-73301193 Msa0091150:CDS
AACGATAATGATGATGACAA+TGG 0.699365 1_2:+73302856 None:intergenic
AGAGTCTTATCCCTCAACAA+AGG 0.699553 1_2:+73301611 None:intergenic
TGTTGAGGGATAAGACTCTG+TGG 0.700670 1_2:-73301607 Msa0091150:CDS
GTCGTGAAAATCAACGACGA+CGG 0.711455 1_2:-73302424 Msa0091150:CDS
CAACTCGCGTTGAATCACCG+TGG 0.722386 1_2:+73302135 None:intergenic
TGAGGCTACTAAGTACATGG+TGG 0.727802 1_2:+73298549 None:intergenic
CAGGTGATGGAGAATGACGA+CGG 0.731799 1_2:+73301978 None:intergenic
ATCCGCGTTGAAGAACTGGG+TGG 0.755991 1_2:-73300030 Msa0091150:intron
TACCACCCAGTTCTTCAACG+CGG 0.758211 1_2:+73300028 None:intergenic
AATGCTTCAGAAAAGCCCTG+TGG 0.795880 1_2:-73301021 Msa0091150:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTTATCTAATATATATACTA+CGG + chr1_2:73301392-73301411 None:intergenic 10.0%
!!! TTGATTTTTTAGAATTGAAA+GGG + chr1_2:73298458-73298477 None:intergenic 15.0%
!!! TTTGATTTTTTAGAATTGAA+AGG + chr1_2:73298459-73298478 None:intergenic 15.0%
!!! TTGAGTTTGATTTTAATTAT+TGG - chr1_2:73299558-73299577 Msa0091150:intron 15.0%
!! GTGTATATAGAAAAATTTCT+TGG - chr1_2:73298503-73298522 Msa0091150:three_prime_UTR 20.0%
!! TATGTCATATAAATCATGAT+TGG + chr1_2:73300543-73300562 None:intergenic 20.0%
!! AAAACTCAAAAGACATAATT+AGG - chr1_2:73300697-73300716 Msa0091150:intron 20.0%
!! AAAAATAAACCAAATAGAAG+GGG + chr1_2:73300730-73300749 None:intergenic 20.0%
!! GAAAAATAAACCAAATAGAA+GGG + chr1_2:73300731-73300750 None:intergenic 20.0%
!! TGAAAAATAAACCAAATAGA+AGG + chr1_2:73300732-73300751 None:intergenic 20.0%
!! AAAACCATAAATCTATTTGA+AGG - chr1_2:73301137-73301156 Msa0091150:CDS 20.0%
!! CAAATATGCAAAGATAATAA+AGG + chr1_2:73302299-73302318 None:intergenic 20.0%
!! TATTATCTTTGCATATTTGT+TGG - chr1_2:73302300-73302319 Msa0091150:CDS 20.0%
!! TTTATGTAAAGAGTTTCTTA+TGG - chr1_2:73302741-73302760 Msa0091150:five_prime_UTR 20.0%
!! ATAAATCAAAGAGTTTCTAT+TGG - chr1_2:73302812-73302831 Msa0091150:five_prime_UTR 20.0%
! AAGAAAAGAAAGTAGGTATT+TGG + chr1_2:73298535-73298554 None:intergenic 25.0%
! TTCACGTTTAACTAAACTTT+AGG - chr1_2:73298556-73298575 Msa0091150:three_prime_UTR 25.0%
!!! TTTTAATAGTTTGCATCACA+GGG + chr1_2:73298639-73298658 None:intergenic 25.0%
!!! TTTTTAATAGTTTGCATCAC+AGG + chr1_2:73298640-73298659 None:intergenic 25.0%
! TAAAACTAAGTCCAGATTAA+TGG - chr1_2:73299362-73299381 Msa0091150:CDS 25.0%
! ATGATTCTTGTTCTAATATG+TGG - chr1_2:73299660-73299679 Msa0091150:intron 25.0%
! TATGAAGAGGTTAATGAATA+TGG - chr1_2:73300346-73300365 Msa0091150:intron 25.0%
!! ACAAATGCATAAAAGTATAC+AGG + chr1_2:73300593-73300612 None:intergenic 25.0%
! TAATACCAAGAGAAAGAAAT+AGG + chr1_2:73300663-73300682 None:intergenic 25.0%
! TACATGTAATAAATGACAAG+TGG - chr1_2:73301000-73301019 Msa0091150:CDS 25.0%
! AGGAAACATATGAAATTACA+CGG + chr1_2:73301240-73301259 None:intergenic 25.0%
! AAACAACACTAAAGAAGAAA+AGG + chr1_2:73301260-73301279 None:intergenic 25.0%
!! TATCAAATTTTGCCTCTAAA+AGG + chr1_2:73301296-73301315 None:intergenic 25.0%
! ATCTAATATATATACTACGG+CGG + chr1_2:73301389-73301408 None:intergenic 25.0%
! AAACAAAATCAAAAGTAACC+AGG + chr1_2:73301572-73301591 None:intergenic 25.0%
! ATTATCGTATCTCAGAAATA+CGG + chr1_2:73302099-73302118 None:intergenic 25.0%
!! TTGTAGTCAATAACGATTTT+AGG + chr1_2:73302342-73302361 None:intergenic 25.0%
! AACGATAATGATGATGACAA+TGG + chr1_2:73298364-73298383 None:intergenic 30.0%
AAAAGAAAGTAGGTATTTGG+TGG + chr1_2:73298532-73298551 None:intergenic 30.0%
CGTGAAAAAGAAAAGAAAGT+AGG + chr1_2:73298542-73298561 None:intergenic 30.0%
! TTCTCTCCAAATCTTGTTAT+TGG + chr1_2:73298836-73298855 None:intergenic 30.0%
! TGATGAAGATGATCCTTTTA+TGG - chr1_2:73299473-73299492 Msa0091150:CDS 30.0%
! TGTGTTTTCTTATACTCATC+TGG + chr1_2:73299510-73299529 None:intergenic 30.0%
AGAAAACACATTTCAGTCTT+TGG - chr1_2:73299520-73299539 Msa0091150:CDS 30.0%
TGTTCTAATATGTGGTAGAT+TGG - chr1_2:73299668-73299687 Msa0091150:intron 30.0%
! TTGCTGTGTTTTGTATTGAA+AGG - chr1_2:73299712-73299731 Msa0091150:intron 30.0%
GAATTTCCTATTGAGAAAGA+GGG - chr1_2:73299734-73299753 Msa0091150:intron 30.0%
!!! AGGGTTCTTTATTTTGTGTA+TGG - chr1_2:73299753-73299772 Msa0091150:intron 30.0%
!!! TTTATTTTGTGTATGGTGTC+AGG - chr1_2:73299760-73299779 Msa0091150:intron 30.0%
TGCAAAATTGTGTTTGGTTA+GGG - chr1_2:73299790-73299809 Msa0091150:intron 30.0%
ATGTGAGTACATACTTTGAT+AGG - chr1_2:73299976-73299995 Msa0091150:intron 30.0%
TCCAAGAAATCTGATGATAA+TGG - chr1_2:73300248-73300267 Msa0091150:intron 30.0%
CCAAGAAATCTGATGATAAT+GGG - chr1_2:73300249-73300268 Msa0091150:intron 30.0%
!! AAATCTGATGATAATGGGAT+TGG - chr1_2:73300254-73300273 Msa0091150:intron 30.0%
!! AATCTGATGATAATGGGATT+GGG - chr1_2:73300255-73300274 Msa0091150:intron 30.0%
AGAGGTTAATGAATATGGTT+CGG - chr1_2:73300351-73300370 Msa0091150:intron 30.0%
!! ATTTTCACTTCTGATTTGTG+TGG + chr1_2:73300438-73300457 None:intergenic 30.0%
ACAAATCAGAAGTGAAAATG+AGG - chr1_2:73300439-73300458 Msa0091150:intron 30.0%
AAATCTTTCAGAATGTTGCT+AGG - chr1_2:73300480-73300499 Msa0091150:intron 30.0%
! TAACTCCTATTTCTTTCTCT+TGG - chr1_2:73300655-73300674 Msa0091150:intron 30.0%
CTTTCTCTTGGTATTATGTA+TGG - chr1_2:73300667-73300686 Msa0091150:intron 30.0%
CTCAATTGATTATGTCACAT+AGG + chr1_2:73300930-73300949 None:intergenic 30.0%
TAGTGTGACCAATAAAGAAA+AGG - chr1_2:73300954-73300973 Msa0091150:CDS 30.0%
! GACAGAAACCTTTTCTTTAT+TGG + chr1_2:73300965-73300984 None:intergenic 30.0%
GAGAAAGGACTAATAAACAA+TGG + chr1_2:73301027-73301046 None:intergenic 30.0%
AAATAGAATGACAGAGAGAA+AGG + chr1_2:73301042-73301061 None:intergenic 30.0%
! TGTGCATCACATTTTCATTA+TGG - chr1_2:73301328-73301347 Msa0091150:CDS 30.0%
TACAACAAGTGAATAATGTC+AGG + chr1_2:73301357-73301376 None:intergenic 30.0%
TCTAATATATATACTACGGC+GGG + chr1_2:73301388-73301407 None:intergenic 30.0%
TAGTTGCATCTGATTAAACT+TGG - chr1_2:73301451-73301470 Msa0091150:CDS 30.0%
! TATTGCTCATTTTATTGTCC+AGG - chr1_2:73301649-73301668 Msa0091150:CDS 30.0%
CCAAATAACCAGTATGATAA+TGG + chr1_2:73301771-73301790 None:intergenic 30.0%
! CCATTATCATACTGGTTATT+TGG - chr1_2:73301768-73301787 Msa0091150:CDS 30.0%
GCTCACAAAAAGAAGAAATT+TGG + chr1_2:73301819-73301838 None:intergenic 30.0%
GTCTTGGTTGCATTTATATT+CGG - chr1_2:73301848-73301867 Msa0091150:CDS 30.0%
TAGAGATATAGACATTACCT+GGG + chr1_2:73301963-73301982 None:intergenic 30.0%
ACTACGGTAGAAATTATGTA+TGG + chr1_2:73302162-73302181 None:intergenic 30.0%
! TTCATGAGTGAAATCTTTTC+AGG + chr1_2:73302233-73302252 None:intergenic 30.0%
! CAGTTTCATTGATAACAAGA+AGG - chr1_2:73302364-73302383 Msa0091150:CDS 30.0%
TGATCCTTCAAGACTATAAA+CGG + chr1_2:73302407-73302426 None:intergenic 30.0%
TCAATTGAACATGGTTAAAG+TGG - chr1_2:73302430-73302449 Msa0091150:CDS 30.0%
!!! AAGAGTTGATGAAGATTTTC+AGG - chr1_2:73302525-73302544 Msa0091150:CDS 30.0%
!!! AGAGTTGATGAAGATTTTCA+GGG - chr1_2:73302526-73302545 Msa0091150:CDS 30.0%
ACAATCACAAATTGAGTAGA+AGG - chr1_2:73302638-73302657 Msa0091150:five_prime_UTR 30.0%
CAATCACAAATTGAGTAGAA+GGG - chr1_2:73302639-73302658 Msa0091150:five_prime_UTR 30.0%
!! GATTAGCTTGATATCTACTA+AGG - chr1_2:73302775-73302794 Msa0091150:five_prime_UTR 30.0%
!! TGATGACAATGGTTGATGAA+GGG + chr1_2:73298353-73298372 None:intergenic 35.0%
!! ATGATGACAATGGTTGATGA+AGG + chr1_2:73298354-73298373 None:intergenic 35.0%
AGAATTGAAAGGGTCTTTCT+AGG + chr1_2:73298448-73298467 None:intergenic 35.0%
! CTGAGAAGCATAAGATTTGA+AGG + chr1_2:73298665-73298684 None:intergenic 35.0%
!! CCAAATCTTGTTATTGGCTT+GGG + chr1_2:73298830-73298849 None:intergenic 35.0%
!! TCCAAATCTTGTTATTGGCT+TGG + chr1_2:73298831-73298850 None:intergenic 35.0%
!!! TACGATTTTTGGAATGACAC+CGG - chr1_2:73298862-73298881 Msa0091150:intron 35.0%
!! AATTTTCCGATTAGTTGCGA+CGG + chr1_2:73298946-73298965 None:intergenic 35.0%
TATGTCATTGGACATGGATT+TGG - chr1_2:73298993-73299012 Msa0091150:CDS 35.0%
AACCAGCTTCAAATTCGAAT+GGG - chr1_2:73299121-73299140 Msa0091150:CDS 35.0%
! TTGATTTTCTCTGCATTGAG+AGG + chr1_2:73299329-73299348 None:intergenic 35.0%
! AGATGATCCTTTTATGGAAG+AGG - chr1_2:73299479-73299498 Msa0091150:CDS 35.0%
GGAAAATCCTCTTCCATAAA+AGG + chr1_2:73299489-73299508 None:intergenic 35.0%
GTCTTTGGATTCTTCTTGAA+TGG - chr1_2:73299535-73299554 Msa0091150:CDS 35.0%
TTTGAGTGTTCCTTTGTTGA+GGG - chr1_2:73299596-73299615 Msa0091150:intron 35.0%
!!! GCAGCTTAAGTTTTGGAAAT+GGG - chr1_2:73299632-73299651 Msa0091150:intron 35.0%
!! TGGTAGATTGGTTTCTGATT+GGG - chr1_2:73299680-73299699 Msa0091150:intron 35.0%
TGGTTTCTGATTGGGTTATT+AGG - chr1_2:73299688-73299707 Msa0091150:intron 35.0%
GGAATTTCCTATTGAGAAAG+AGG - chr1_2:73299733-73299752 Msa0091150:intron 35.0%
AAAGAACCCTCTTTCTCAAT+AGG + chr1_2:73299743-73299762 None:intergenic 35.0%
AAGCTGTGCAAAATTGTGTT+TGG - chr1_2:73299784-73299803 Msa0091150:intron 35.0%
GTGCAAAATTGTGTTTGGTT+AGG - chr1_2:73299789-73299808 Msa0091150:intron 35.0%
AAACCTTGGTCACATATTGA+AGG + chr1_2:73299881-73299900 None:intergenic 35.0%
! TCAATATGTGACCAAGGTTT+TGG - chr1_2:73299881-73299900 Msa0091150:intron 35.0%
TCATCAGATTTCTTGGAAAG+TGG + chr1_2:73300245-73300264 None:intergenic 35.0%
CCCATTATCATCAGATTTCT+TGG + chr1_2:73300252-73300271 None:intergenic 35.0%
! TTAATGAATATGGTTCGGCA+TGG - chr1_2:73300356-73300375 Msa0091150:intron 35.0%
! TAATGAATATGGTTCGGCAT+GGG - chr1_2:73300357-73300376 Msa0091150:intron 35.0%
GGTGAGTAAGACTAGATTAA+TGG + chr1_2:73300522-73300541 None:intergenic 35.0%
! CATAAAAGTATACAGGTGTC+AGG + chr1_2:73300586-73300605 None:intergenic 35.0%
AAACATGACCAAATCACCTT+AGG - chr1_2:73300788-73300807 Msa0091150:CDS 35.0%
AAAACTTGCCTAAGGTGATT+TGG + chr1_2:73300799-73300818 None:intergenic 35.0%
!! TCACCTTAGGCAAGTTTTAA+TGG - chr1_2:73300801-73300820 Msa0091150:CDS 35.0%
ACACCATTAAAACTTGCCTA+AGG + chr1_2:73300807-73300826 None:intergenic 35.0%
AGTAGTAGTAGTAGTAGTCT+TGG - chr1_2:73300843-73300862 Msa0091150:CDS 35.0%
ATAAAACGCATTAAGTCCTC+AGG + chr1_2:73301098-73301117 None:intergenic 35.0%
CGCTCCTTCAAATAGATTTA+TGG + chr1_2:73301144-73301163 None:intergenic 35.0%
!! CTTTAGTGTTGTTTGTCTGA+TGG - chr1_2:73301266-73301285 Msa0091150:CDS 35.0%
! TCTGATGGAATACCTTTTAG+AGG - chr1_2:73301281-73301300 Msa0091150:CDS 35.0%
TGAAAATGTGATGCACATCA+AGG + chr1_2:73301325-73301344 None:intergenic 35.0%
AACAGAGCTTAGGTAACTAT+GGG + chr1_2:73301415-73301434 None:intergenic 35.0%
AAACAGAGCTTAGGTAACTA+TGG + chr1_2:73301416-73301435 None:intergenic 35.0%
!! AATCAGATGCAACTAGTCTT+AGG + chr1_2:73301446-73301465 None:intergenic 35.0%
CTTAGTTGCCATTATCATAC+TGG - chr1_2:73301760-73301779 Msa0091150:CDS 35.0%
!! GGTTATTTGGCTCTTGATAT+TGG - chr1_2:73301781-73301800 Msa0091150:CDS 35.0%
TGTAATGCATCCATTTGATG+TGG - chr1_2:73301913-73301932 Msa0091150:CDS 35.0%
GTAATGCATCCATTTGATGT+GGG - chr1_2:73301914-73301933 Msa0091150:CDS 35.0%
CTAGAGATATAGACATTACC+TGG + chr1_2:73301964-73301983 None:intergenic 35.0%
CAGGTAATGTCTATATCTCT+AGG - chr1_2:73301962-73301981 Msa0091150:CDS 35.0%
AAACCACAAGCAAAAATGAG+GGG + chr1_2:73302042-73302061 None:intergenic 35.0%
GAAACCACAAGCAAAAATGA+GGG + chr1_2:73302043-73302062 None:intergenic 35.0%
TGAAACCACAAGCAAAAATG+AGG + chr1_2:73302044-73302063 None:intergenic 35.0%
! TTTTTGCTTGTGGTTTCAGA+TGG - chr1_2:73302046-73302065 Msa0091150:CDS 35.0%
!!! TGAGTGAAATCTTTTCAGGT+GGG + chr1_2:73302229-73302248 None:intergenic 35.0%
!! ATGAGTGAAATCTTTTCAGG+TGG + chr1_2:73302230-73302249 None:intergenic 35.0%
TTCAAGACTATAAACGGTGA+AGG + chr1_2:73302401-73302420 None:intergenic 35.0%
! TTCACCGTTTATAGTCTTGA+AGG - chr1_2:73302400-73302419 Msa0091150:CDS 35.0%
TGGAAGTTCATTCTATGAGT+TGG + chr1_2:73302464-73302483 None:intergenic 35.0%
TAGAATGAACTTCCAAGACA+TGG - chr1_2:73302469-73302488 Msa0091150:CDS 35.0%
AGAATGAACTTCCAAGACAT+GGG - chr1_2:73302470-73302489 Msa0091150:CDS 35.0%
TATATCTTTCTCCCATGTCT+TGG + chr1_2:73302484-73302503 None:intergenic 35.0%
ACATGGGAGAAAGATATATC+AGG - chr1_2:73302486-73302505 Msa0091150:CDS 35.0%
CCTGCTAAAATGTAACACTT+CGG + chr1_2:73302715-73302734 None:intergenic 35.0%
!! CGAAGTGTTACATTTTAGCA+GGG - chr1_2:73302713-73302732 Msa0091150:five_prime_UTR 35.0%
!! GATGACAATGGTTGATGAAG+GGG + chr1_2:73298352-73298371 None:intergenic 40.0%
! TAGTTTGCATCACAGGGTTA+GGG + chr1_2:73298633-73298652 None:intergenic 40.0%
! ATAGTTTGCATCACAGGGTT+AGG + chr1_2:73298634-73298653 None:intergenic 40.0%
!! ATCTTGTTATTGGCTTGGGA+AGG + chr1_2:73298826-73298845 None:intergenic 40.0%
CCCAAGCCAATAACAAGATT+TGG - chr1_2:73298827-73298846 Msa0091150:CDS 40.0%
! GAGAATCCAGCTACGATTTT+TGG - chr1_2:73298851-73298870 Msa0091150:CDS 40.0%
GTCATTCCAAAAATCGTAGC+TGG + chr1_2:73298860-73298879 None:intergenic 40.0%
CATGTCCAATGACATATCAC+CGG + chr1_2:73298989-73299008 None:intergenic 40.0%
ATTGGACATGGATTTGGAGA+TGG - chr1_2:73298999-73299018 Msa0091150:CDS 40.0%
! CGAGTTGAAAGTTAGTTTCG+AGG - chr1_2:73299098-73299117 Msa0091150:CDS 40.0%
GAACCAGCTTCAAATTCGAA+TGG - chr1_2:73299120-73299139 Msa0091150:CDS 40.0%
! ATCCCATTCGAATTTGAAGC+TGG + chr1_2:73299126-73299145 None:intergenic 40.0%
AGATCTTCTATCCGGTTCAT+CGG + chr1_2:73299394-73299413 None:intergenic 40.0%
! AAATCGAGTCAGCTTTTGTC+TGG - chr1_2:73299426-73299445 Msa0091150:CDS 40.0%
! AATCGAGTCAGCTTTTGTCT+GGG - chr1_2:73299427-73299446 Msa0091150:CDS 40.0%
!! AGCTTTTGTCTGGGATGATT+GGG - chr1_2:73299436-73299455 Msa0091150:CDS 40.0%
CTTTGAGTGTTCCTTTGTTG+AGG - chr1_2:73299595-73299614 Msa0091150:intron 40.0%
! AGAGTCTTATCCCTCAACAA+AGG + chr1_2:73299609-73299628 None:intergenic 40.0%
!!! GGCAGCTTAAGTTTTGGAAA+TGG - chr1_2:73299631-73299650 Msa0091150:intron 40.0%
!! GTGGTAGATTGGTTTCTGAT+TGG - chr1_2:73299679-73299698 Msa0091150:intron 40.0%
!!! TAGGGCTTGTTTTGATTGCA+TGG - chr1_2:73299808-73299827 Msa0091150:intron 40.0%
TGTCCTTCAATATGTGACCA+AGG - chr1_2:73299875-73299894 Msa0091150:intron 40.0%
CAAGAAACAGACCAAAACCT+TGG + chr1_2:73299895-73299914 None:intergenic 40.0%
!! CAAGGTTTTGGTCTGTTTCT+TGG - chr1_2:73299893-73299912 Msa0091150:intron 40.0%
!! GTTTTGGTCTGTTTCTTGGT+GGG - chr1_2:73299897-73299916 Msa0091150:intron 40.0%
GGTGAAAACTCTAGTGGTTA+AGG - chr1_2:73299935-73299954 Msa0091150:intron 40.0%
GTTTGTGATCGAAACACTCT+CGG - chr1_2:73300022-73300041 Msa0091150:intron 40.0%
TTTGTGATCGAAACACTCTC+GGG - chr1_2:73300023-73300042 Msa0091150:intron 40.0%
TCCACTCTTGATGTTAGGAA+AGG + chr1_2:73300162-73300181 None:intergenic 40.0%
TTCCTAACATCAAGAGTGGA+AGG - chr1_2:73300162-73300181 Msa0091150:intron 40.0%
AACCTTCCACTCTTGATGTT+AGG + chr1_2:73300167-73300186 None:intergenic 40.0%
!! GATGATAATGGGATTGGGAA+TGG - chr1_2:73300260-73300279 Msa0091150:intron 40.0%
GCTGAATCCAAATAACGTGT+CGG - chr1_2:73300316-73300335 Msa0091150:intron 40.0%
! AATGAATATGGTTCGGCATG+GGG - chr1_2:73300358-73300377 Msa0091150:intron 40.0%
AAGTATACAGGTGTCAGGTA+TGG + chr1_2:73300581-73300600 None:intergenic 40.0%
CTGCAGGTTTATATATCCTG+AGG - chr1_2:73301079-73301098 Msa0091150:CDS 40.0%
!! AAGTTTGTTCACTGCGGTTT+TGG + chr1_2:73301723-73301742 None:intergenic 40.0%
! TCGATGAAGTTTGTTCACTG+CGG + chr1_2:73301729-73301748 None:intergenic 40.0%
CATCTATCTCCCACATCAAA+TGG + chr1_2:73301926-73301945 None:intergenic 40.0%
ATCGTATCTCAGAAATACGG+TGG + chr1_2:73302096-73302115 None:intergenic 40.0%
TAGTAGCAAGGACACTGTTA+GGG + chr1_2:73302136-73302155 None:intergenic 40.0%
TTAGTAGCAAGGACACTGTT+AGG + chr1_2:73302137-73302156 None:intergenic 40.0%
TAACAGTGTCCTTGCTACTA+AGG - chr1_2:73302136-73302155 Msa0091150:CDS 40.0%
! TATGTATGGCCTTAGTAGCA+AGG + chr1_2:73302148-73302167 None:intergenic 40.0%
TCAATAGAATCTCCCATGTC+AGG + chr1_2:73302185-73302204 None:intergenic 40.0%
!!! GAGTGAAATCTTTTCAGGTG+GGG + chr1_2:73302228-73302247 None:intergenic 40.0%
! TTGATAACAAGAAGGAGCAC+TGG - chr1_2:73302372-73302391 Msa0091150:CDS 40.0%
GGATCACGATCAATTGAACA+TGG - chr1_2:73302421-73302440 Msa0091150:CDS 40.0%
ACATGGTTAAAGTGGCAATC+TGG - chr1_2:73302438-73302457 Msa0091150:CDS 40.0%
TGGGAGAAAGATATATCAGG+AGG - chr1_2:73302489-73302508 Msa0091150:CDS 40.0%
GCTCTAACATTAATGTCGAG+AGG + chr1_2:73302578-73302597 None:intergenic 40.0%
ACATGAGGCTACTAAGTACA+TGG + chr1_2:73302674-73302693 None:intergenic 40.0%
!! CCGAAGTGTTACATTTTAGC+AGG - chr1_2:73302712-73302731 Msa0091150:five_prime_UTR 40.0%
!! GTGTTACATTTTAGCAGGGT+AGG - chr1_2:73302717-73302736 Msa0091150:five_prime_UTR 40.0%
!! TCAGTAAGGTGTTGGATAAG+AGG + chr1_2:73302888-73302907 None:intergenic 40.0%
!! TCTTTCTAGGACGATGTGAG+GGG + chr1_2:73298435-73298454 None:intergenic 45.0%
!! GTCTTTCTAGGACGATGTGA+GGG + chr1_2:73298436-73298455 None:intergenic 45.0%
GTCGTGAAAATCAACGACGA+CGG - chr1_2:73298793-73298812 Msa0091150:CDS 45.0%
!! GATCCTCTAGCTTAGCTTTG+TGG + chr1_2:73298921-73298940 None:intergenic 45.0%
CGGTGATATGTCATTGGACA+TGG - chr1_2:73298987-73299006 Msa0091150:CDS 45.0%
ATGGAGGAGCTTCAGAATGA+AGG - chr1_2:73299018-73299037 Msa0091150:CDS 45.0%
AATGAAGGTAACGTCGCTGA+CGG - chr1_2:73299033-73299052 Msa0091150:CDS 45.0%
AAGCTGTGAACGATCCTGTT+CGG - chr1_2:73299148-73299167 Msa0091150:CDS 45.0%
AATGACGACGGTCGTGATTA+GGG + chr1_2:73299230-73299249 None:intergenic 45.0%
GTTCCTCTCAAACGAAGCAT+TGG + chr1_2:73299307-73299326 None:intergenic 45.0%
GATCTTCTATCCGGTTCATC+GGG + chr1_2:73299393-73299412 None:intergenic 45.0%
GATGAACCGGATAGAAGATC+TGG - chr1_2:73299393-73299412 Msa0091150:CDS 45.0%
AACCGGATAGAAGATCTGGT+CGG - chr1_2:73299397-73299416 Msa0091150:CDS 45.0%
!! CAGCTTTTGTCTGGGATGAT+TGG - chr1_2:73299435-73299454 Msa0091150:CDS 45.0%
!! TTTTGTCTGGGATGATTGGG+AGG - chr1_2:73299439-73299458 Msa0091150:CDS 45.0%
TGTTGAGGGATAAGACTCTG+TGG - chr1_2:73299610-73299629 Msa0091150:intron 45.0%
! CTCTGTGGCAGCTTAAGTTT+TGG - chr1_2:73299625-73299644 Msa0091150:intron 45.0%
!! GGTTTTGGTCTGTTTCTTGG+TGG - chr1_2:73299896-73299915 Msa0091150:intron 45.0%
! CTGTTTCTTGGTGGGTACTT+TGG - chr1_2:73299905-73299924 Msa0091150:intron 45.0%
!! GTGGTTGGTGAAAACTCTAG+TGG - chr1_2:73299929-73299948 Msa0091150:intron 45.0%
TTGTGATCGAAACACTCTCG+GGG - chr1_2:73300024-73300043 Msa0091150:intron 45.0%
TTTCGAATCTCCACCAAAGG+CGG + chr1_2:73300050-73300069 None:intergenic 45.0%
TTTGGTGGAGATTCGAAAGG+CGG - chr1_2:73300052-73300071 Msa0091150:CDS 45.0%
GTTCAGAAGTTGCAGAATGC+CGG - chr1_2:73300104-73300123 Msa0091150:CDS 45.0%
!! TAGGAAAGGCACTAGCTCTT+AGG + chr1_2:73300148-73300167 None:intergenic 45.0%
GCCTTTCCTAACATCAAGAG+TGG - chr1_2:73300158-73300177 Msa0091150:intron 45.0%
ACATCAAGAGTGGAAGGTTG+AGG - chr1_2:73300168-73300187 Msa0091150:intron 45.0%
AATGCTTCAGAAAAGCCCTG+TGG - chr1_2:73300196-73300215 Msa0091150:intron 45.0%
AAAAGCCCTGTGGTTAAGAG+TGG - chr1_2:73300206-73300225 Msa0091150:intron 45.0%
ACTTGCCACTCTTAACCACA+GGG + chr1_2:73300214-73300233 None:intergenic 45.0%
AACTTGCCACTCTTAACCAC+AGG + chr1_2:73300215-73300234 None:intergenic 45.0%
!! GATAATGGGATTGGGAATGG+TGG - chr1_2:73300263-73300282 Msa0091150:intron 45.0%
!! ATCCAAATAACGTGTCGGCT+TGG - chr1_2:73300321-73300340 Msa0091150:intron 45.0%
TTCCAAGCCGACACGTTATT+TGG + chr1_2:73300326-73300345 None:intergenic 45.0%
!! TGTCGGCTTGGAATATGAAG+AGG - chr1_2:73300333-73300352 Msa0091150:intron 45.0%
TTTCAGAATGTTGCTAGGCG+CGG - chr1_2:73300485-73300504 Msa0091150:intron 45.0%
GGATGTCTTCCCCTTCTATT+TGG - chr1_2:73300718-73300737 Msa0091150:intron 45.0%
AAACCTGCAGTGCAGCATAA+AGG + chr1_2:73301069-73301088 None:intergenic 45.0%
! GCGTTTTATGCGAGAAGATG+AGG - chr1_2:73301109-73301128 Msa0091150:CDS 45.0%
!! TTTGAAGGAGCGTCTGATTC+TGG - chr1_2:73301152-73301171 Msa0091150:CDS 45.0%
!! TTGAAGGAGCGTCTGATTCT+GGG - chr1_2:73301153-73301172 Msa0091150:CDS 45.0%
CAAATCCGCGTTGAAGAACT+GGG - chr1_2:73301184-73301203 Msa0091150:CDS 45.0%
!! GATGCAACTAGTCTTAGGCA+GGG + chr1_2:73301441-73301460 None:intergenic 45.0%
!! AGATGCAACTAGTCTTAGGC+AGG + chr1_2:73301442-73301461 None:intergenic 45.0%
TTGTCCAGGTTAATGCCTTC+AGG - chr1_2:73301663-73301682 Msa0091150:CDS 45.0%
TGTCCAGGTTAATGCCTTCA+GGG - chr1_2:73301664-73301683 Msa0091150:CDS 45.0%
TGTGAGCTCACAACTTGTCT+TGG - chr1_2:73301832-73301851 Msa0091150:CDS 45.0%
ATGTGAAATTGATGCGACCC+AGG - chr1_2:73301943-73301962 Msa0091150:CDS 45.0%
GTCTTCTTGCAATGCAAACC+TGG - chr1_2:73301999-73302018 Msa0091150:CDS 45.0%
ACAAGCAAAAATGAGGGGAG+GGG + chr1_2:73302037-73302056 None:intergenic 45.0%
CACAAGCAAAAATGAGGGGA+GGG + chr1_2:73302038-73302057 None:intergenic 45.0%
TTTCTACCGTAGTCCTGACA+TGG - chr1_2:73302169-73302188 Msa0091150:CDS 45.0%
TTCTACCGTAGTCCTGACAT+GGG - chr1_2:73302170-73302189 Msa0091150:CDS 45.0%
AATCTCCCATGTCAGGACTA+CGG + chr1_2:73302178-73302197 None:intergenic 45.0%
! TAATGTCGAGAGGCATGAGA+CGG + chr1_2:73302568-73302587 None:intergenic 45.0%
GTGATTGTTGTCCAACTAGC+TGG + chr1_2:73302626-73302645 None:intergenic 45.0%
TGAGGCTACTAAGTACATGG+TGG + chr1_2:73302671-73302690 None:intergenic 45.0%
ACATAATGCCACGCAACATG+AGG + chr1_2:73302689-73302708 None:intergenic 45.0%
!!! TAATGTTTTTAAATAATTTA+TGG + chr1_2:73298322-73298341 None:intergenic 5.0%
TTGCAGAGAGAGAGTTGTGG+TGG + chr1_2:73298298-73298317 None:intergenic 50.0%
GGATTGCAGAGAGAGAGTTG+TGG + chr1_2:73298301-73298320 None:intergenic 50.0%
!! GGTCTTTCTAGGACGATGTG+AGG + chr1_2:73298437-73298456 None:intergenic 50.0%
AATAGGGAGCTGTTCGTGGT+CGG + chr1_2:73298722-73298741 None:intergenic 50.0%
! GATTTTCACGACGACGTCTC+CGG + chr1_2:73298785-73298804 None:intergenic 50.0%
GTGAAAATCAACGACGACGG+CGG - chr1_2:73298796-73298815 Msa0091150:CDS 50.0%
CTCATCACGAACATTGTCGC+CGG + chr1_2:73298884-73298903 None:intergenic 50.0%
!! CCTCTAGCTTAGCTTTGTGG+CGG + chr1_2:73298918-73298937 None:intergenic 50.0%
GATCCACCGTCGCAACTAAT+CGG - chr1_2:73298937-73298956 Msa0091150:intron 50.0%
! TTTCCGATTAGTTGCGACGG+TGG + chr1_2:73298943-73298962 None:intergenic 50.0%
CTTCATAAACAGCGTGCCTC+CGG - chr1_2:73298967-73298986 Msa0091150:intron 50.0%
TGCCTCCGGTGATATGTCAT+TGG - chr1_2:73298981-73299000 Msa0091150:CDS 50.0%
GTCCAATGACATATCACCGG+AGG + chr1_2:73298986-73299005 None:intergenic 50.0%
GGACATGGATTTGGAGATGG+AGG - chr1_2:73299002-73299021 Msa0091150:CDS 50.0%
AACTCGCGTTGAATCACCGT+GGG + chr1_2:73299084-73299103 None:intergenic 50.0%
TTGCTGTGTCTTCTCCGAAC+AGG + chr1_2:73299165-73299184 None:intergenic 50.0%
TGTTCGGAGAAGACACAGCA+AGG - chr1_2:73299164-73299183 Msa0091150:intron 50.0%
AGCAAGGATTCGCCGTCAAT+GGG - chr1_2:73299180-73299199 Msa0091150:intron 50.0%
CGAGCATACTCACCCATTGA+CGG + chr1_2:73299195-73299214 None:intergenic 50.0%
CGTCAATGGGTGAGTATGCT+CGG - chr1_2:73299193-73299212 Msa0091150:intron 50.0%
ATGACGACGGTCGTGATTAG+GGG + chr1_2:73299229-73299248 None:intergenic 50.0%
GAATGACGACGGTCGTGATT+AGG + chr1_2:73299231-73299250 None:intergenic 50.0%
!! CAGGTGATGGAGAATGACGA+CGG + chr1_2:73299242-73299261 None:intergenic 50.0%
TCGTCATTCTCCATCACCTG+CGG - chr1_2:73299242-73299261 Msa0091150:intron 50.0%
!! TAATGGTGGTGGTGATTGCG+AGG - chr1_2:73299266-73299285 Msa0091150:intron 50.0%
! GTGGTGATTGCGAGGTTTTG+AGG - chr1_2:73299274-73299293 Msa0091150:intron 50.0%
!! CCTCTCAAACGAAGCATTGG+AGG + chr1_2:73299304-73299323 None:intergenic 50.0%
CCTCCAATGCTTCGTTTGAG+AGG - chr1_2:73299301-73299320 Msa0091150:CDS 50.0%
ATCGGGTGGGTCCATTAATC+TGG + chr1_2:73299376-73299395 None:intergenic 50.0%
TTCTATCCGGTTCATCGGGT+GGG + chr1_2:73299389-73299408 None:intergenic 50.0%
ACCGGATAGAAGATCTGGTC+GGG - chr1_2:73299398-73299417 Msa0091150:CDS 50.0%
ACCCGACCAGATCTTCTATC+CGG + chr1_2:73299402-73299421 None:intergenic 50.0%
! TCTGGGATGATTGGGAGGAA+AGG - chr1_2:73299444-73299463 Msa0091150:CDS 50.0%
! TCTTGGTGGGTACTTTGGTG+TGG - chr1_2:73299910-73299929 Msa0091150:intron 50.0%
GCCTTTGGTGGAGATTCGAA+AGG - chr1_2:73300049-73300068 Msa0091150:CDS 50.0%
GCCTTTCGAATCTCCACCAA+AGG + chr1_2:73300053-73300072 None:intergenic 50.0%
!! AGAGGAAAGGCTTGCTGATG+AGG - chr1_2:73300082-73300101 Msa0091150:CDS 50.0%
GTCAGCAGGTATGCTAACAC+CGG + chr1_2:73300126-73300145 None:intergenic 50.0%
AAGAGTGGAAGGTTGAGGAG+TGG - chr1_2:73300173-73300192 Msa0091150:intron 50.0%
AATGGGATTGGGAATGGTGG+TGG - chr1_2:73300266-73300285 Msa0091150:intron 50.0%
! GCATGGGGCACTTACTACAT+TGG - chr1_2:73300373-73300392 Msa0091150:intron 50.0%
CTTCCTTTATGCTGCACTGC+AGG - chr1_2:73301063-73301082 Msa0091150:CDS 50.0%
GCAAATCCGCGTTGAAGAAC+TGG - chr1_2:73301183-73301202 Msa0091150:CDS 50.0%
TACCACCCAGTTCTTCAACG+CGG + chr1_2:73301192-73301211 None:intergenic 50.0%
!! ATCGAGAGAGTATTCGTGCC+TGG - chr1_2:73301551-73301570 Msa0091150:CDS 50.0%
!! TCTCCCTGAAGGCATTAACC+TGG + chr1_2:73301670-73301689 None:intergenic 50.0%
AGGTTAATGCCTTCAGGGAG+AGG - chr1_2:73301669-73301688 Msa0091150:CDS 50.0%
GAGGGGGACAAAATTAGACC+AGG + chr1_2:73302020-73302039 None:intergenic 50.0%
CAAGCAAAAATGAGGGGAGG+GGG + chr1_2:73302036-73302055 None:intergenic 50.0%
CCACAAGCAAAAATGAGGGG+AGG + chr1_2:73302039-73302058 None:intergenic 50.0%
!! CCTCCCCTCATTTTTGCTTG+TGG - chr1_2:73302036-73302055 Msa0091150:CDS 50.0%
! TTTCAGGTGGGGTAGCTACA+TGG + chr1_2:73302217-73302236 None:intergenic 50.0%
GGAAGACGATCAGAAGTGGT+AGG + chr1_2:73302605-73302624 None:intergenic 50.0%
AGCTGGAAGACGATCAGAAG+TGG + chr1_2:73302609-73302628 None:intergenic 50.0%
CTGATCGTCTTCCAGCTAGT+TGG - chr1_2:73302612-73302631 Msa0091150:five_prime_UTR 50.0%
CTTAGTAGCCTCATGTTGCG+TGG - chr1_2:73302678-73302697 Msa0091150:five_prime_UTR 50.0%
TAGAGAGTCGCGACTCAGTA+AGG + chr1_2:73302902-73302921 None:intergenic 50.0%
TCACAGGGTTAGGGTCTCTC+TGG + chr1_2:73298624-73298643 None:intergenic 55.0%
GGAGAATAGGGAGCTGTTCG+TGG + chr1_2:73298726-73298745 None:intergenic 55.0%
GTTGGCGGTCGTGGAGAATA+GGG + chr1_2:73298738-73298757 None:intergenic 55.0%
TGTTGGCGGTCGTGGAGAAT+AGG + chr1_2:73298739-73298758 None:intergenic 55.0%
GAAAAGAGCGGCTGCTGTGT+TGG + chr1_2:73298756-73298775 None:intergenic 55.0%
! CAGCAGCCGCTCTTTTCCTA+TGG - chr1_2:73298759-73298778 Msa0091150:CDS 55.0%
! AGCCGCTCTTTTCCTATGGC+CGG - chr1_2:73298763-73298782 Msa0091150:CDS 55.0%
CTCCGGCCATAGGAAAAGAG+CGG + chr1_2:73298768-73298787 None:intergenic 55.0%
CCGCCACAAAGCTAAGCTAG+AGG - chr1_2:73298915-73298934 Msa0091150:intron 55.0%
CGCTGACGGAAAGTTAACGC+CGG - chr1_2:73299047-73299066 Msa0091150:CDS 55.0%
TGACGGAAAGTTAACGCCGG+TGG - chr1_2:73299050-73299069 Msa0091150:CDS 55.0%
CAACTCGCGTTGAATCACCG+TGG + chr1_2:73299085-73299104 None:intergenic 55.0%
CAGCAAGGATTCGCCGTCAA+TGG - chr1_2:73299179-73299198 Msa0091150:intron 55.0%
TCGTGATTAGGGGGTTGTGG+AGG + chr1_2:73299219-73299238 None:intergenic 55.0%
TGACGACGGTCGTGATTAGG+GGG + chr1_2:73299228-73299247 None:intergenic 55.0%
CGTCATTCTCCATCACCTGC+GGG - chr1_2:73299243-73299262 Msa0091150:intron 55.0%
TCTCCATCACCTGCGGGTAA+TGG - chr1_2:73299249-73299268 Msa0091150:intron 55.0%
AATGGACCCACCCGATGAAC+CGG - chr1_2:73299380-73299399 Msa0091150:CDS 55.0%
CTTCTATCCGGTTCATCGGG+TGG + chr1_2:73299390-73299409 None:intergenic 55.0%
! GGTGGGTACTTTGGTGTGGT+TGG - chr1_2:73299914-73299933 Msa0091150:intron 55.0%
GGAGATTCGAAAGGCGGAAG+AGG - chr1_2:73300058-73300077 Msa0091150:CDS 55.0%
TCGAAAGGCGGAAGAGGAAG+AGG - chr1_2:73300064-73300083 Msa0091150:CDS 55.0%
AGGCGGAAGAGGAAGAGGAA+AGG - chr1_2:73300069-73300088 Msa0091150:CDS 55.0%
! GCACTAGCTCTTAGGTCAGC+AGG + chr1_2:73300140-73300159 None:intergenic 55.0%
!! GGATTGGGAATGGTGGTGGT+GGG - chr1_2:73300270-73300289 Msa0091150:intron 55.0%
ATCCGCGTTGAAGAACTGGG+TGG - chr1_2:73301187-73301206 Msa0091150:CDS 55.0%
GGCAGGGTCAAACAGAGCTT+AGG + chr1_2:73301425-73301444 None:intergenic 55.0%
GTCGCGACTCAGTAAGGTGT+TGG + chr1_2:73302896-73302915 None:intergenic 55.0%
AAGAGCGGCTGCTGTGTTGG+CGG + chr1_2:73298753-73298772 None:intergenic 60.0%
CGGAAAGTTAACGCCGGTGG+AGG - chr1_2:73299053-73299072 Msa0091150:CDS 60.0%
ACCGTGGGAGATTCCTCCAC+CGG + chr1_2:73299069-73299088 None:intergenic 60.0%
CGGTCGTGATTAGGGGGTTG+TGG + chr1_2:73299222-73299241 None:intergenic 60.0%
CCACCATTACCCGCAGGTGA+TGG + chr1_2:73299255-73299274 None:intergenic 60.0%
! CCATCACCTGCGGGTAATGG+TGG - chr1_2:73299252-73299271 Msa0091150:intron 60.0%
! TCACCTGCGGGTAATGGTGG+TGG - chr1_2:73299255-73299274 Msa0091150:intron 60.0%
TCACCACCACCATTACCCGC+AGG + chr1_2:73299261-73299280 None:intergenic 60.0%
!! GGGATTGGGAATGGTGGTGG+TGG - chr1_2:73300269-73300288 Msa0091150:intron 60.0%
AAGCGCTCTCCTCTCCCTGA+AGG + chr1_2:73301681-73301700 None:intergenic 60.0%
ACGACGACGTCTCCGGCCAT+AGG + chr1_2:73298778-73298797 None:intergenic 65.0%
GCCGGTGGAGGAATCTCCCA+CGG - chr1_2:73299065-73299084 Msa0091150:CDS 65.0%
AACACTCTCGGGGCCGCCTT+TGG - chr1_2:73300034-73300053 Msa0091150:CDS 65.0%
ATGTTGCTAGGCGCGGCTGC+AGG - chr1_2:73300492-73300511 Msa0091150:intron 65.0%
! GGCTGCTGTGTTGGCGGTCG+TGG + chr1_2:73298747-73298766 None:intergenic 70.0%
ACTCTCGGGGCCGCCTTTGG+TGG - chr1_2:73300037-73300056 Msa0091150:CDS 70.0%
Chromosome Type Strat End Strand Name
chr1_2 gene 73298294 73302945 73298294 ID=Msa0091150;Name=Msa0091150
chr1_2 mRNA 73298294 73302945 73298294 ID=Msa0091150-mRNA-1;Parent=Msa0091150;Name=Msa0091150-mRNA-1;_AED=0.03;_eAED=0.03;_QI=349|1|1|1|1|1|5|293|925
chr1_2 exon 73298294 73298872 73298294 ID=Msa0091150-mRNA-1:exon:25618;Parent=Msa0091150-mRNA-1
chr1_2 exon 73298972 73299174 73298972 ID=Msa0091150-mRNA-1:exon:25617;Parent=Msa0091150-mRNA-1
chr1_2 exon 73299275 73299568 73299275 ID=Msa0091150-mRNA-1:exon:25616;Parent=Msa0091150-mRNA-1
chr1_2 exon 73300031 73300154 73300031 ID=Msa0091150-mRNA-1:exon:25615;Parent=Msa0091150-mRNA-1
chr1_2 exon 73300726 73302945 73300726 ID=Msa0091150-mRNA-1:exon:25614;Parent=Msa0091150-mRNA-1
chr1_2 five_prime_UTR 73302597 73302945 73302597 ID=Msa0091150-mRNA-1:five_prime_utr;Parent=Msa0091150-mRNA-1
chr1_2 CDS 73300726 73302596 73300726 ID=Msa0091150-mRNA-1:cds;Parent=Msa0091150-mRNA-1
chr1_2 CDS 73300031 73300154 73300031 ID=Msa0091150-mRNA-1:cds;Parent=Msa0091150-mRNA-1
chr1_2 CDS 73299275 73299568 73299275 ID=Msa0091150-mRNA-1:cds;Parent=Msa0091150-mRNA-1
chr1_2 CDS 73298972 73299174 73298972 ID=Msa0091150-mRNA-1:cds;Parent=Msa0091150-mRNA-1
chr1_2 CDS 73298587 73298872 73298587 ID=Msa0091150-mRNA-1:cds;Parent=Msa0091150-mRNA-1
chr1_2 three_prime_UTR 73298294 73298586 73298294 ID=Msa0091150-mRNA-1:three_prime_utr;Parent=Msa0091150-mRNA-1
Gene Sequence

>Msa0091150

ATGCAAACTATTAAAAAATCCTTCAAATCTTATGCTTCTCAGAACAATAAACATTCTAGAAAATTTTCTGCAGATTCCGACCACGAACAGCTCCCTATTCTCCACGACCGCCAACACAGCAGCCGCTCTTTTCCTATGGCCGGAGACGTCGTCGTGAAAATCAACGACGACGGCGGTGAACCTTCCCAAGCCAATAACAAGATTTGGAGAGAATCCAGCTACGATTTTTGGAATGACACCGGCGACAATGTTCGTGATGAGAGTTTTGATTTCCGCCACAAAGCTAAGCTAGAGGATCCACCGTCGCAACTAATCGGAAAATTTCTTCATAAACAGCGTGCCTCCGGTGATATGTCATTGGACATGGATTTGGAGATGGAGGAGCTTCAGAATGAAGGTAACGTCGCTGACGGAAAGTTAACGCCGGTGGAGGAATCTCCCACGGTGATTCAACGCGAGTTGAAAGTTAGTTTCGAGGAACCAGCTTCAAATTCGAATGGGATTGAAGCTGTGAACGATCCTGTTCGGAGAAGACACAGCAAGGATTCGCCGTCAATGGGTGAGTATGCTCGGCCTCCACAACCCCCTAATCACGACCGTCGTCATTCTCCATCACCTGCGGGTAATGGTGGTGGTGATTGCGAGGTTTTGAGGTGTTCCTCCAATGCTTCGTTTGAGAGGAACCTCTCAATGCAGAGAAAATCAACGTTAATGAAAACTAAAACTAAGTCCAGATTAATGGACCCACCCGATGAACCGGATAGAAGATCTGGTCGGGTTGCTAAATCGAGTCAGCTTTTGTCTGGGATGATTGGGAGGAAAGGTGATGATGATGAAGATGATCCTTTTATGGAAGAGGATTTTCCAGATGAGTATAAGAAAACACATTTCAGTCTTTGGATTCTTCTTGAATGGTTGAGTTTGATTTTAATTATTGGTGCATTAGTAACAACTTTGAGTGTTCCTTTGTTGAGGGATAAGACTCTGTGGCAGCTTAAGTTTTGGAAATGGGAAGTGATGATTCTTGTTCTAATATGTGGTAGATTGGTTTCTGATTGGGTTATTAGGATTGCTGTGTTTTGTATTGAAAGGAATTTCCTATTGAGAAAGAGGGTTCTTTATTTTGTGTATGGTGTCAGGAAAGCTGTGCAAAATTGTGTTTGGTTAGGGCTTGTTTTGATTGCATGGCATTTTCTGTTTGATAAGAGAGTTCAAAGAGAGACAAACAGTGATGTCCTTCAATATGTGACCAAGGTTTTGGTCTGTTTCTTGGTGGGTACTTTGGTGTGGTTGGTGAAAACTCTAGTGGTTAAGGTTTTAGCTTCTTCTTTTCATGTGAGTACATACTTTGATAGGATTCAAGAGTCACTGTTTAATCAGTTTGTGATCGAAACACTCTCGGGGCCGCCTTTGGTGGAGATTCGAAAGGCGGAAGAGGAAGAGGAAAGGCTTGCTGATGAGGTTCAGAAGTTGCAGAATGCCGGTGTTAGCATACCTGCTGACCTAAGAGCTAGTGCCTTTCCTAACATCAAGAGTGGAAGGTTGAGGAGTGGAATGCTTCAGAAAAGCCCTGTGGTTAAGAGTGGCAAGTTTTCAATGCCACTTTCCAAGAAATCTGATGATAATGGGATTGGGAATGGTGGTGGTGGGATAACTATTGATCACTTGCACAAGCTGAATCCAAATAACGTGTCGGCTTGGAATATGAAGAGGTTAATGAATATGGTTCGGCATGGGGCACTTACTACATTGGATGAGCAGATACTTGATTCTTCTGCTGATGATGAGCATGCCACACAAATCAGAAGTGAAAATGAGGCTAAAGCAGCTGCTAAGAAAATCTTTCAGAATGTTGCTAGGCGCGGCTGCAGGTTTATATATCCTGAGGACTTAATGCGTTTTATGCGAGAAGATGAGGCTATAAAAACCATAAATCTATTTGAAGGAGCGTCTGATTCTGGGAAAATCAGCAAATCCGCGTTGAAGAACTGGGTGGTTAATGCCTTCAGGGAGAGGAGAGCGCTTGCTTTGACATTGAATGACACCAAAACCGCAGTGAACAAACTTCATCGAATGCTCAATTTCTTAGTTGCCATTATCATACTGGTTATTTGGCTCTTGATATTGGAAATTGCTACTACCAAATTTCTTCTTTTTGTGAGCTCACAACTTGTCTTGGTTGCATTTATATTCGGAAACACATGCAAGACTGTATTTGAAGCAATCATATTTTTATTTGTAATGCATCCATTTGATGTGGGAGATAGATGTGAAATTGATGCGACCCAGATGGTTGTCGAAGAGATGAACATCTTGACCACCGTATTTCTGAGATACGATAATCAAAAGATAACGATCCCTAACAGTGTCCTTGCTACTAAGGCCATACATAATTTCTACCGTAGTCCTGACATGGGAGATTCTATTGAATTCTGTATCCATGTAGCTACCCCACCTGAAAAGATTTCACTCATGAAACACAGAATACATAATTTCATTGATAACAAGAAGGAGCACTGGTATCCTTCACCGTTTATAGTCTTGAAGGATCACGATCAATTGAACATGGTTAAAGTGGCAATCTGGCCAACTCATAGAATGAACTTCCAAGACATGGGAGAAAGATATATCAGGAGGTCTCTTCTTATTGAAGAGTTGATGAAGATTTTCAGGGATCTCGACATTCAGTACCGTCTCATGCCTCTCGACATTAATGTTAGAGCTTTGCCTACCACTTCTGATCGTCTTCCAGCTAGTTGGACAACAATCACAAATTGA
Protein sequence

>Msa0091150

MQTIKKSFKSYASQNNKHSRKFSADSDHEQLPILHDRQHSSRSFPMAGDVVVKINDDGGEPSQANNKIWRESSYDFWNDTGDNVRDESFDFRHKAKLEDPPSQLIGKFLHKQRASGDMSLDMDLEMEELQNEGNVADGKLTPVEESPTVIQRELKVSFEEPASNSNGIEAVNDPVRRRHSKDSPSMGEYARPPQPPNHDRRHSPSPAGNGGGDCEVLRCSSNASFERNLSMQRKSTLMKTKTKSRLMDPPDEPDRRSGRVAKSSQLLSGMIGRKGDDDEDDPFMEEDFPDEYKKTHFSLWILLEWLSLILIIGALVTTLSVPLLRDKTLWQLKFWKWEVMILVLICGRLVSDWVIRIAVFCIERNFLLRKRVLYFVYGVRKAVQNCVWLGLVLIAWHFLFDKRVQRETNSDVLQYVTKVLVCFLVGTLVWLVKTLVVKVLASSFHVSTYFDRIQESLFNQFVIETLSGPPLVEIRKAEEEEERLADEVQKLQNAGVSIPADLRASAFPNIKSGRLRSGMLQKSPVVKSGKFSMPLSKKSDDNGIGNGGGGITIDHLHKLNPNNVSAWNMKRLMNMVRHGALTTLDEQILDSSADDEHATQIRSENEAKAAAKKIFQNVARRGCRFIYPEDLMRFMREDEAIKTINLFEGASDSGKISKSALKNWVVNAFRERRALALTLNDTKTAVNKLHRMLNFLVAIIILVIWLLILEIATTKFLLFVSSQLVLVAFIFGNTCKTVFEAIIFLFVMHPFDVGDRCEIDATQMVVEEMNILTTVFLRYDNQKITIPNSVLATKAIHNFYRSPDMGDSIEFCIHVATPPEKISLMKHRIHNFIDNKKEHWYPSPFIVLKDHDQLNMVKVAIWPTHRMNFQDMGERYIRRSLLIEELMKIFRDLDIQYRLMPLDINVRALPTTSDRLPASWTTITN*