AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0974860

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0974860 MtrunA17_Chr6g0453551 94.000 200 12 0 104 303 117 316 7.64e-145 410
Msa0974860 MtrunA17_Chr7g0217941 78.947 209 42 1 95 303 110 316 1.19e-127 366
Msa0974860 MtrunA17_Chr6g0487101 53.073 179 79 2 107 283 200 375 3.57e-61 199
Msa0974860 MtrunA17_Chr8g0389771 50.838 179 83 2 107 283 197 372 3.74e-59 193
Msa0974860 MtrunA17_Chr1g0194311 45.810 179 92 2 107 283 188 363 7.73e-48 164
Msa0974860 MtrunA17_Chr4g0070051 43.850 187 96 4 101 285 161 340 3.09e-44 154
Msa0974860 MtrunA17_Chr6g0466961 43.889 180 97 2 107 285 145 321 9.93e-44 152
Msa0974860 MtrunA17_Chr7g0265201 41.837 196 100 4 107 295 201 389 9.37e-43 151
Msa0974860 MtrunA17_Chr5g0399221 41.270 189 102 4 107 292 178 360 1.82e-42 149
Msa0974860 MtrunA17_Chr7g0258341 41.711 187 96 2 107 283 199 382 2.43e-42 150
Msa0974860 MtrunA17_Chr8g0351871 41.622 185 99 2 108 285 137 319 1.24e-41 146
Msa0974860 MtrunA17_Chr5g0446301 42.458 179 98 2 107 283 177 352 3.80e-40 143
Msa0974860 MtrunA17_Chr6g0466951 41.899 179 100 2 108 285 175 350 4.28e-39 140
Msa0974860 MtrunA17_Chr8g0345281 38.421 190 103 3 107 282 383 572 2.28e-38 142
Msa0974860 MtrunA17_Chr5g0440871 37.824 193 109 3 106 293 134 320 8.82e-37 134
Msa0974860 MtrunA17_Chr7g0234711 35.211 213 117 7 106 303 61 267 1.34e-36 132
Msa0974860 MtrunA17_Chr7g0269541 37.895 190 104 5 107 282 350 539 3.12e-36 136
Msa0974860 MtrunA17_Chr2g0302001 37.000 200 110 4 99 282 221 420 3.15e-36 134
Msa0974860 MtrunA17_Chr4g0069881 37.438 203 110 5 95 282 318 518 6.99e-36 135
Msa0974860 MtrunA17_Chr3g0079351 35.681 213 116 7 106 303 319 525 8.63e-36 134
Msa0974860 MtrunA17_Chr8g0345211 37.879 198 106 6 107 291 378 571 8.87e-36 135
Msa0974860 MtrunA17_Chr1g0161731 34.470 264 153 7 37 285 78 336 1.44e-35 131
Msa0974860 MtrunA17_Chr4g0018371 40.351 171 90 3 106 264 331 501 2.06e-35 134
Msa0974860 MtrunA17_Chr3g0079361 35.211 213 117 7 106 303 319 525 2.71e-35 133
Msa0974860 MtrunA17_Chr3g0080381 33.971 209 119 5 107 302 423 625 4.23e-35 134
Msa0974860 MtrunA17_Chr3g0090091 35.211 213 117 8 106 303 320 526 4.67e-35 132
Msa0974860 MtrunA17_Chr7g0269511 37.313 201 108 7 107 293 359 555 4.93e-35 133
Msa0974860 MtrunA17_Chr1g0192321 37.264 212 112 7 107 303 376 581 6.93e-35 133
Msa0974860 MtrunA17_Chr4g0069841 37.173 191 106 4 107 283 310 500 1.00e-34 132
Msa0974860 MtrunA17_Chr3g0079341 34.742 213 118 7 106 303 319 525 1.16e-34 131
Msa0974860 MtrunA17_Chr2g0314691 36.548 197 115 4 89 282 6 195 1.24e-34 125
Msa0974860 MtrunA17_Chr1g0195311 35.714 210 116 6 107 303 109 312 3.43e-34 126
Msa0974860 MtrunA17_Chr3g0126771 35.789 190 108 4 107 282 391 580 5.45e-34 130
Msa0974860 MtrunA17_Chr2g0294321 37.640 178 101 3 121 291 176 350 6.10e-34 127
Msa0974860 MtrunA17_Chr1g0195301 35.714 210 116 6 107 303 350 553 7.73e-34 129
Msa0974860 MtrunA17_Chr1g0195321 35.714 210 116 6 107 303 350 553 7.73e-34 129
Msa0974860 MtrunA17_Chr1g0147051 36.842 190 106 4 107 282 401 590 8.80e-34 130
Msa0974860 MtrunA17_Chr7g0272141 38.378 185 103 4 107 283 345 526 9.19e-34 129
Msa0974860 MtrunA17_Chr5g0420831 35.556 180 111 2 106 282 178 355 1.02e-33 126
Msa0974860 MtrunA17_Chr4g0037751 36.872 179 108 3 107 282 179 355 1.42e-33 126
Msa0974860 MtrunA17_Chr1g0192331 37.500 192 104 4 107 282 320 511 2.40e-33 128
Msa0974860 MtrunA17_Chr2g0302021 35.602 191 109 3 107 283 319 509 2.90e-33 127
Msa0974860 MtrunA17_Chr8g0354911 34.450 209 118 5 107 302 407 609 5.01e-33 127
Msa0974860 MtrunA17_Chr1g0195331 35.238 210 117 6 107 303 350 553 1.05e-32 126
Msa0974860 MtrunA17_Chr7g0269521 36.000 200 112 5 107 293 357 553 1.94e-32 125
Msa0974860 MtrunA17_Chr4g0069861 36.316 190 107 4 107 282 311 500 2.70e-32 125
Msa0974860 MtrunA17_Chr5g0440901 44.444 135 67 2 106 235 11 142 2.77e-32 117
Msa0974860 MtrunA17_Chr1g0175661 34.314 204 116 5 107 292 353 556 4.12e-32 125
Msa0974860 MtrunA17_Chr4g0011751 35.233 193 111 4 107 285 283 475 4.78e-32 124
Msa0974860 MtrunA17_Chr4g0011791 33.488 215 132 4 79 282 278 492 5.44e-32 124
Msa0974860 MtrunA17_Chr7g0269531 33.654 208 119 5 107 301 360 561 1.13e-31 124
Msa0974860 MtrunA17_Chr3g0080391 35.135 185 111 3 107 282 373 557 1.23e-31 124
Msa0974860 MtrunA17_Chr4g0011771 37.037 189 106 3 107 282 308 496 1.82e-31 122
Msa0974860 MtrunA17_Chr1g0195351 34.762 210 116 7 107 303 350 551 4.15e-31 122
Msa0974860 MtrunA17_Chr8g0354901 33.511 188 116 3 107 285 380 567 5.44e-31 122
Msa0974860 MtrunA17_Chr8g0391291 30.620 258 147 6 56 282 266 522 6.65e-31 121
Msa0974860 MtrunA17_Chr7g0272151 34.434 212 117 7 107 302 375 580 1.02e-30 121
Msa0974860 MtrunA17_Chr8g0391311 36.316 190 107 4 107 282 335 524 1.03e-30 120
Msa0974860 MtrunA17_Chr1g0192311 36.869 198 95 7 107 281 362 552 2.59e-30 120
Msa0974860 MtrunA17_Chr1g0192281 36.869 198 95 7 107 281 362 552 2.59e-30 120
Msa0974860 MtrunA17_Chr2g0334111 34.171 199 119 5 102 289 116 313 3.38e-30 116
Msa0974860 MtrunA17_Chr4g0025841 43.382 136 69 2 105 235 131 263 3.68e-30 115
Msa0974860 MtrunA17_Chr4g0069891 33.333 189 113 3 107 282 389 577 6.66e-30 119
Msa0974860 MtrunA17_Chr7g0233801 32.984 191 113 4 107 282 346 536 9.30e-30 118
Msa0974860 MtrunA17_Chr4g0000121 35.354 198 98 6 107 281 349 539 1.58e-29 117
Msa0974860 MtrunA17_Chr1g0192301 37.000 200 92 8 107 281 367 557 1.69e-29 117
Msa0974860 MtrunA17_Chr2g0295531 32.701 211 124 5 107 302 336 543 1.91e-29 117
Msa0974860 MtrunA17_Chr8g0384121 34.872 195 108 2 107 282 353 547 2.21e-29 117
Msa0974860 MtrunA17_Chr2g0295551 30.806 211 128 5 107 302 354 561 2.36e-29 117
Msa0974860 MtrunA17_Chr7g0268241 32.381 210 124 7 105 303 146 348 4.35e-29 114
Msa0974860 MtrunA17_Chr7g0233831 34.503 171 99 3 107 264 347 517 2.10e-28 114
Msa0974860 MtrunA17_Chr5g0437831 32.701 211 122 7 106 302 176 380 3.50e-28 112
Msa0974860 MtrunA17_Chr7g0233771 33.333 192 112 5 107 282 346 537 3.54e-28 114
Msa0974860 MtrunA17_Chr7g0265161 35.593 177 96 4 107 283 49 207 3.55e-28 108
Msa0974860 MtrunA17_Chr2g0295851 36.559 186 99 6 113 291 163 336 4.92e-28 110
Msa0974860 MtrunA17_Chr2g0301931 33.155 187 115 3 107 283 91 277 6.82e-28 109
Msa0974860 MtrunA17_Chr8g0380581 29.167 240 146 7 81 302 140 373 1.06e-27 110
Msa0974860 MtrunA17_Chr3g0129921 33.333 195 111 2 107 282 353 547 1.23e-27 112
Msa0974860 MtrunA17_Chr7g0270691 36.224 196 112 4 107 289 344 539 2.84e-27 111
Msa0974860 MtrunA17_Chr1g0194091 32.821 195 115 4 107 286 357 550 5.48e-27 110
Msa0974860 MtrunA17_Chr4g0067601 30.806 211 128 5 107 302 362 569 8.90e-27 110
Msa0974860 MtrunA17_Chr7g0270651 30.901 233 140 6 80 291 331 563 1.11e-26 109
Msa0974860 MtrunA17_Chr4g0067611 33.918 171 103 2 107 267 362 532 2.13e-26 108
Msa0974860 MtrunA17_Chr7g0270631 31.330 233 139 6 80 291 319 551 6.78e-26 107
Msa0974860 MtrunA17_Chr7g0270631 29.148 223 127 6 107 301 899 1118 1.32e-22 98.2
Msa0974860 MtrunA17_Chr2g0295541 26.860 242 128 5 107 302 354 592 6.38e-24 101
Msa0974860 MtrunA17_Chr1g0194081 30.688 189 119 3 107 283 359 547 9.28e-24 101
Msa0974860 MtrunA17_Chr7g0270661 30.901 233 138 8 81 291 332 563 8.90e-23 98.2
Msa0974860 MtrunA17_Chr7g0270671 30.901 233 138 8 81 291 332 563 8.90e-23 98.2
Msa0974860 MtrunA17_Chr7g0271381 28.505 214 132 5 108 303 344 554 3.91e-19 87.4
Msa0974860 MtrunA17_Chr6g0460141 41.748 103 54 1 60 162 48 144 2.17e-18 80.5
Msa0974860 MtrunA17_Chr5g0440881 33.083 133 86 1 151 283 5 134 9.73e-18 78.6
Msa0974860 MtrunA17_Chr6g0459781 41.346 104 53 2 63 164 85 182 1.17e-17 79.7
Msa0974860 MtrunA17_Chr6g0459791 36.607 112 67 2 172 282 2 110 5.63e-17 75.5
Msa0974860 MtrunA17_Chr5g0437821 31.343 134 80 2 116 237 4 137 1.09e-16 75.5
Msa0974860 MtrunA17_Chr3g0079191 81.395 43 8 0 44 86 172 214 9.49e-14 69.7
Msa0974860 MtrunA17_Chr5g0444991 41.892 74 40 1 169 242 9 79 1.47e-13 65.1
Msa0974860 MtrunA17_Chr5g0440891 50.000 58 29 0 105 162 143 200 6.62e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0974860 AT3G29090.1 75.120 209 50 1 95 303 111 317 1.30e-119 346
Msa0974860 AT5G19730.1 54.190 179 77 2 107 283 201 376 1.20e-60 198
Msa0974860 AT2G21610.1 45.503 189 95 3 105 291 150 332 1.30e-52 176
Msa0974860 AT2G21610.2 45.503 189 95 3 105 291 155 337 1.34e-52 176
Msa0974860 AT2G36700.1 43.716 183 96 2 107 285 151 330 3.81e-48 164
Msa0974860 AT2G36710.1 44.086 186 94 2 107 285 200 382 1.14e-46 162
Msa0974860 AT5G47500.1 41.361 191 103 4 107 294 176 360 6.35e-44 154
Msa0974860 AT3G17060.1 39.901 203 112 3 99 294 144 343 4.33e-42 148
Msa0974860 AT5G07430.1 41.053 190 107 3 96 282 162 349 8.62e-42 148
Msa0974860 AT1G05310.1 39.683 189 101 2 107 285 200 385 2.07e-40 145
Msa0974860 AT4G00190.1 38.647 207 110 6 107 302 271 471 6.25e-40 145
Msa0974860 AT5G26810.1 40.000 195 102 4 108 293 147 335 9.29e-40 142
Msa0974860 AT1G69940.1 39.326 178 104 2 107 282 174 349 3.88e-39 141
Msa0974860 AT5G07420.1 38.743 191 112 3 95 282 161 349 4.84e-39 141
Msa0974860 AT5G07410.1 39.326 178 104 2 107 282 174 349 2.37e-38 139
Msa0974860 AT5G04970.1 35.500 200 113 4 107 293 415 611 1.50e-37 141
Msa0974860 AT3G05620.1 40.217 184 100 3 107 283 345 525 1.91e-37 140
Msa0974860 AT3G10720.1 35.500 200 113 4 107 293 54 250 2.97e-37 134
Msa0974860 AT5G55590.1 40.104 192 108 3 95 282 184 372 3.44e-37 136
Msa0974860 AT4G03930.1 37.143 210 114 6 106 303 319 522 4.23e-37 139
Msa0974860 AT5G49180.1 39.153 189 102 3 107 282 365 553 4.47e-37 139
Msa0974860 AT5G61680.1 37.705 183 110 2 102 282 172 352 1.54e-36 134
Msa0974860 AT1G23200.1 41.622 185 97 4 107 283 357 538 2.98e-36 137
Msa0974860 AT3G05610.1 39.011 182 99 3 107 277 360 540 5.86e-36 137
Msa0974860 AT2G45220.1 38.624 189 103 4 107 282 307 495 1.26e-35 134
Msa0974860 AT3G10720.2 35.500 200 113 4 107 293 410 606 1.33e-35 135
Msa0974860 AT3G10710.1 39.785 186 103 3 107 283 360 545 1.45e-35 135
Msa0974860 AT3G24130.1 35.602 191 113 2 100 283 136 323 3.45e-35 130
Msa0974860 AT1G53840.1 36.559 186 108 4 107 282 385 570 4.03e-35 134
Msa0974860 AT3G27980.1 36.667 210 115 6 106 303 292 495 4.55e-35 132
Msa0974860 AT2G43050.1 39.037 187 103 3 105 283 317 500 4.81e-35 133
Msa0974860 AT3G49220.1 36.316 190 107 4 107 282 390 579 5.17e-35 134
Msa0974860 AT3G49220.3 36.316 190 107 4 107 282 435 624 5.54e-35 134
Msa0974860 AT3G06830.1 35.545 211 117 5 106 303 362 566 7.05e-35 133
Msa0974860 AT1G11580.1 39.267 191 100 6 107 282 351 540 8.11e-35 132
Msa0974860 AT1G11580.2 39.267 191 100 6 107 282 372 561 8.91e-35 133
Msa0974860 AT3G14310.1 36.316 190 107 3 107 282 386 575 1.05e-34 132
Msa0974860 AT4G33230.1 37.824 193 106 4 107 285 401 593 1.09e-34 133
Msa0974860 AT1G11590.1 35.714 210 117 6 106 303 319 522 3.92e-34 130
Msa0974860 AT3G59010.1 29.924 264 157 5 50 289 259 518 4.67e-34 130
Msa0974860 AT5G27870.1 35.979 189 108 3 107 282 357 545 8.64e-34 130
Msa0974860 AT1G53830.1 36.316 190 107 3 107 282 381 570 1.33e-33 129
Msa0974860 AT3G43270.1 38.421 190 103 4 107 282 319 508 2.80e-33 128
Msa0974860 AT5G04960.1 35.266 207 118 5 107 303 362 562 3.33e-33 128
Msa0974860 AT2G19150.1 37.186 199 110 4 108 298 147 338 1.06e-32 123
Msa0974860 AT2G47550.1 34.826 201 115 5 106 293 352 549 1.41e-32 126
Msa0974860 AT2G47280.1 36.082 194 110 3 108 293 142 329 1.75e-32 123
Msa0974860 AT3G47400.1 37.306 193 105 5 106 282 385 577 3.01e-32 125
Msa0974860 AT5G64640.1 38.265 196 101 3 107 282 397 592 4.25e-32 125
Msa0974860 AT1G11370.1 40.580 138 71 2 107 233 150 287 5.74e-32 120
Msa0974860 AT3G60730.1 29.749 279 158 8 56 303 246 517 1.32e-31 123
Msa0974860 AT3G14300.1 36.364 187 108 4 107 282 765 951 1.46e-31 124
Msa0974860 AT4G02330.1 33.333 189 113 3 107 282 366 554 2.53e-31 123
Msa0974860 AT2G26450.1 33.500 200 115 5 107 292 406 601 3.57e-31 123
Msa0974860 AT5G18990.1 35.519 183 108 2 108 283 139 318 3.85e-31 119
Msa0974860 AT3G62170.1 34.031 191 113 4 107 284 383 573 7.06e-31 122
Msa0974860 AT5G53370.1 36.316 190 107 3 107 282 379 568 8.21e-31 122
Msa0974860 AT5G53370.2 36.316 190 107 3 107 282 415 604 1.33e-30 121
Msa0974860 AT2G26440.1 36.508 189 107 3 107 282 342 530 1.46e-30 120
Msa0974860 AT4G02300.1 37.306 193 105 5 106 283 325 516 1.60e-30 120
Msa0974860 AT5G51490.1 37.306 193 105 5 106 282 327 519 1.81e-30 120
Msa0974860 AT5G55590.2 40.789 152 83 3 95 242 184 332 2.73e-30 117
Msa0974860 AT5G09760.1 36.410 195 105 2 107 282 347 541 3.29e-30 120
Msa0974860 AT5G09760.2 36.410 195 105 2 107 282 373 567 5.12e-30 119
Msa0974860 AT4G15980.1 33.645 214 115 6 107 303 497 700 7.92e-30 119
Msa0974860 AT1G02810.1 32.973 185 111 3 107 278 372 556 9.55e-30 119
Msa0974860 AT4G15980.2 33.645 214 115 6 107 303 507 710 1.03e-29 119
Msa0974860 AT4G33220.2 34.211 190 111 4 107 282 196 385 1.27e-29 116
Msa0974860 AT4G02320.1 32.857 210 121 5 107 302 312 515 2.40e-29 117
Msa0974860 AT4G33220.1 34.211 190 111 4 107 282 317 506 6.14e-29 116
Msa0974860 AT2G47030.1 34.555 191 112 4 107 284 383 573 1.03e-28 115
Msa0974860 AT2G47040.1 32.461 191 116 4 107 284 390 580 4.92e-28 114
Msa0974860 AT5G20860.2 30.736 231 144 4 80 294 303 533 1.34e-27 112
Msa0974860 AT5G51500.1 35.751 193 108 5 106 282 331 523 1.58e-27 112
Msa0974860 AT5G20860.1 32.161 199 121 3 80 264 275 473 2.50e-27 111
Msa0974860 AT2G19150.2 38.971 136 72 2 108 235 147 279 1.50e-23 97.8

Find 80 sgRNAs with CRISPR-Local

Find 160 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGATTGCAGGTTGGAATAAT+TGG 0.140963 6_4:+8243602 Msa0974860:CDS
TCGTTTCCATCTTACGTTTA+AGG 0.170663 6_4:-8241658 None:intergenic
GGTCTTTGCATTTACTTATA+TGG 0.186939 6_4:+8243567 Msa0974860:CDS
CTTCCTGTCAAACTCCTTCT+TGG 0.213865 6_4:-8241996 None:intergenic
CATAATTTCTAAGCAGAATA+TGG 0.223122 6_4:-8243982 None:intergenic
GACACACTGTATTTACATTA+TGG 0.279427 6_4:+8242992 Msa0974860:CDS
TTTGACAGAGATCAGGATTC+AGG 0.306395 6_4:+8241826 Msa0974860:intron
GGAAGGCCATGGGGACCTTT+TGG 0.316288 6_4:+8243538 Msa0974860:CDS
GATTGCAGGTTGGAATAATT+GGG 0.319736 6_4:+8243603 Msa0974860:CDS
GTCCCTCGAAACGGGTGAAA+TGG 0.336495 6_4:+8243854 Msa0974860:CDS
CGAATTCAAACAAGAATATA+AGG 0.336527 6_4:+8241874 Msa0974860:CDS
TGGCAATAGCACTGCACTCC+TGG 0.364657 6_4:+8243066 Msa0974860:CDS
TTTACAATTGCAGGTTCCTT+GGG 0.365614 6_4:+8242870 Msa0974860:CDS
AGCCTTCTTCTCCATGGCCT+TGG 0.394114 6_4:-8241963 None:intergenic
AGTGGATATGACAATGTTCC+AGG 0.395814 6_4:-8243084 None:intergenic
TTGAAAGATTGTTATATTGA+AGG 0.396540 6_4:+8243025 Msa0974860:CDS
GATCATTGTATAAAGATTGC+AGG 0.399550 6_4:+8243589 Msa0974860:CDS
CTTGTCAGCCTTCTTCTCCA+TGG 0.409850 6_4:-8241969 None:intergenic
GGAAGTTCATATGCATATCT+TGG 0.422152 6_4:+8243517 Msa0974860:CDS
TTGCAGGTTCCTTGGGTGGC+AGG 0.427351 6_4:+8242877 Msa0974860:CDS
TCCCTCGAAACGGGTGAAAT+GGG 0.435014 6_4:+8243855 Msa0974860:CDS
CATATCCACTGCAAGTCTGC+AGG 0.437941 6_4:+8243097 Msa0974860:CDS
TCTGCTTAGAAATTATGTTA+AGG 0.443185 6_4:+8243988 Msa0974860:exon
GGCCCATTTCACCCGTTTCG+AGG 0.443339 6_4:-8243857 None:intergenic
TGTTTGCCTTAAACGTAAGA+TGG 0.456233 6_4:+8241652 Msa0974860:CDS
TTCTTTATTCTTCAACACTC+TGG 0.457533 6_4:-8243878 None:intergenic
GACCAAGGCCATGGAGAAGA+AGG 0.466340 6_4:+8241961 Msa0974860:CDS
AGGCCAAGAAGGAGTTTGAC+AGG 0.479224 6_4:+8241993 Msa0974860:CDS
ACCTTGGCTTGCTCAAAGAA+TGG 0.481631 6_4:+8243948 Msa0974860:CDS
GGCCTTCTGCAACTCCTCCA+TGG 0.487800 6_4:-8241921 None:intergenic
TGTAATGTTTGACAGAGATC+AGG 0.493819 6_4:+8241819 Msa0974860:intron
AAGGCAAACATTTCGCCGCT+CGG 0.508967 6_4:-8241639 None:intergenic
TTGAAATACTCGTTCCTCCA+TGG 0.512919 6_4:-8242020 None:intergenic
GGAGGAGTTGCAGAAGGCCG+CGG 0.514036 6_4:+8241925 Msa0974860:CDS
TTGCTCAAAGAATGGACATA+AGG 0.514749 6_4:+8243956 Msa0974860:CDS
GCCCATTTCACCCGTTTCGA+GGG 0.515455 6_4:-8243856 None:intergenic
ATGCATATCTTGGAAGGCCA+TGG 0.516421 6_4:+8243527 Msa0974860:CDS
TGCATATCTTGGAAGGCCAT+GGG 0.520080 6_4:+8243528 Msa0974860:CDS
GGCTGACAAGAAGGCCAAGA+AGG 0.520097 6_4:+8241982 Msa0974860:CDS
GTTGAAGAATAAAGAAGCTG+AGG 0.523702 6_4:+8243885 Msa0974860:CDS
TCGCAAGAGGACCAAGGCCA+TGG 0.536103 6_4:+8241952 Msa0974860:CDS
ACAATTGCAGGTTCCTTGGG+TGG 0.537665 6_4:+8242873 Msa0974860:CDS
GCAAAGACCACTCTTCCAAA+AGG 0.543612 6_4:-8243553 None:intergenic
CAAGAAGGAGTTTGACAGGA+AGG 0.548461 6_4:+8241997 Msa0974860:CDS
ATTGCAGGTTGGAATAATTG+GGG 0.548688 6_4:+8243604 Msa0974860:CDS
TTGTTATATTGAAGGAAGTG+TGG 0.550354 6_4:+8243033 Msa0974860:CDS
AGGCCGCGGAGGCTCGCAAG+AGG 0.555753 6_4:+8241939 Msa0974860:CDS
ATTGTATAAAGATTGCAGGT+TGG 0.558425 6_4:+8243593 Msa0974860:CDS
GGAGAAGAAGGCTGACAAGA+AGG 0.560433 6_4:+8241973 Msa0974860:CDS
TCCATTCTTTGAGCAAGCCA+AGG 0.565342 6_4:-8243949 None:intergenic
GGGTTTAGAAGAAGACAAGA+AGG 0.569198 6_4:+8241898 Msa0974860:CDS
AGAAGAAGACAAGAAGGCCA+TGG 0.579224 6_4:+8241904 Msa0974860:CDS
GAAACGATGTGGAAAGGAGG+AGG 0.581067 6_4:+8241674 Msa0974860:CDS
TTCAAACAAGAATATAAGGA+GGG 0.581628 6_4:+8241878 Msa0974860:CDS
GGAGTTTGACAGGAAGGCCA+TGG 0.585214 6_4:+8242003 Msa0974860:CDS
TGTTAAGGACACTTGAAACA+TGG 0.586212 6_4:+8244003 Msa0974860:three_prime_UTR
GGCCATGGAGGAGTTGCAGA+AGG 0.586263 6_4:+8241919 Msa0974860:CDS
ATATCCACTGCAAGTCTGCA+GGG 0.587199 6_4:+8243098 Msa0974860:CDS
GATTGCAGATGTGCTATCAC+AGG 0.587245 6_4:+8243487 Msa0974860:intron
GTTCATATGCATATCTTGGA+AGG 0.587629 6_4:+8243521 Msa0974860:CDS
TGAACCCTGCAGACTTGCAG+TGG 0.596152 6_4:-8243102 None:intergenic
ATGGAAACGATGTGGAAAGG+AGG 0.597891 6_4:+8241671 Msa0974860:CDS
TGTGCTATCACAGGCAATGG+AGG 0.600519 6_4:+8243496 Msa0974860:CDS
ACTCTTCCAAAAGGTCCCCA+TGG 0.609898 6_4:-8243544 None:intergenic
ATTCAAACAAGAATATAAGG+AGG 0.612417 6_4:+8241877 Msa0974860:CDS
AGATGTGCTATCACAGGCAA+TGG 0.612915 6_4:+8243493 Msa0974860:intron
AACGTAAGATGGAAACGATG+TGG 0.624138 6_4:+8241663 Msa0974860:CDS
GCAGGGTTCAGGGCAAGCAG+TGG 0.627011 6_4:+8242817 Msa0974860:intron
GGAGGCTCGCAAGAGGACCA+AGG 0.630454 6_4:+8241946 Msa0974860:CDS
ATATTTCAAGTACTTAGATG+TGG 0.631100 6_4:+8241704 Msa0974860:CDS
AAGATGGAAACGATGTGGAA+AGG 0.640033 6_4:+8241668 Msa0974860:CDS
GACAGAGATCAGGATTCAGG+AGG 0.641026 6_4:+8241829 Msa0974860:intron
GTAAAGTTACCTGCCACCCA+AGG 0.645790 6_4:-8242886 None:intergenic
GGTCCTCTTGCGAGCCTCCG+CGG 0.648934 6_4:-8241942 None:intergenic
AGAAGACAAGAAGGCCATGG+AGG 0.649097 6_4:+8241907 Msa0974860:CDS
GCATATCTTGGAAGGCCATG+GGG 0.658092 6_4:+8243529 Msa0974860:CDS
GGAGTTGCAGAAGGCCGCGG+AGG 0.658147 6_4:+8241928 Msa0974860:CDS
GCAAACATTTCGCCGCTCGG+TGG 0.674374 6_4:-8241636 None:intergenic
GTATTCATTGTGCCACCGAG+CGG 0.677615 6_4:+8241624 Msa0974860:CDS
GTTTGACAGGAAGGCCATGG+AGG 0.703539 6_4:+8242006 Msa0974860:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! GTAGACAAATTTTTATTATA+CGG + chr6_4:8242446-8242465 Msa0974860:intron 15.0%
!!! TAAGTTGAAAATTTAATTGA+TGG + chr6_4:8242662-8242681 Msa0974860:intron 15.0%
!!! TAATTTTGCTTAAAAATTAC+AGG + chr6_4:8243812-8243831 Msa0974860:intron 15.0%
!!! ATTAAAGCTTTTTAAGATTT+GGG - chr6_4:8244066-8244085 None:intergenic 15.0%
!!! TATTAAAGCTTTTTAAGATT+TGG - chr6_4:8244067-8244086 None:intergenic 15.0%
!!! TTTGTGCATAATTTTATGTT+TGG + chr6_4:8242286-8242305 Msa0974860:intron 20.0%
!! ATGAAAAAAAAAAGAAGGAA+AGG - chr6_4:8242796-8242815 None:intergenic 20.0%
!!! TTTCCTTCTTTTTTTTTTCA+TGG + chr6_4:8242795-8242814 Msa0974860:intron 20.0%
!! TTGAAAGATTGTTATATTGA+AGG + chr6_4:8243025-8243044 Msa0974860:CDS 20.0%
!! TATAAAGTGTAAATGATTTG+TGG + chr6_4:8243461-8243480 Msa0974860:intron 20.0%
!! ATTACATGTCTCTAAATATA+AGG + chr6_4:8243696-8243715 Msa0974860:intron 20.0%
!!! TAAGATTTGGGTTTTATTTT+AGG - chr6_4:8244054-8244073 None:intergenic 20.0%
!! ATATTTCAAGTACTTAGATG+TGG + chr6_4:8241704-8241723 Msa0974860:CDS 25.0%
! CGAATTCAAACAAGAATATA+AGG + chr6_4:8241874-8241893 Msa0974860:CDS 25.0%
! ATTCAAACAAGAATATAAGG+AGG + chr6_4:8241877-8241896 Msa0974860:CDS 25.0%
! TTCAAACAAGAATATAAGGA+GGG + chr6_4:8241878-8241897 Msa0974860:CDS 25.0%
!! TCTTATGAAGGTAGTATTTT+GGG - chr6_4:8242189-8242208 None:intergenic 25.0%
! TAAATGTTATGCTCTTATGA+AGG - chr6_4:8242201-8242220 None:intergenic 25.0%
! ATGTTTATGTTATGTGTGAT+GGG + chr6_4:8242469-8242488 Msa0974860:intron 25.0%
! AAAAAGCTTCAAATGACAAA+GGG - chr6_4:8242592-8242611 None:intergenic 25.0%
! TATGGAGATACTACTTAATA+AGG - chr6_4:8242713-8242732 None:intergenic 25.0%
! AAAAATCTGCATAATGCTTA+TGG - chr6_4:8242731-8242750 None:intergenic 25.0%
!!! TTCTTTTTTTTTTCATGGCA+GGG + chr6_4:8242800-8242819 Msa0974860:intron 25.0%
!! TTTTTCATTGTTTATGATGC+AGG + chr6_4:8242970-8242989 Msa0974860:intron 25.0%
! GCATTAACACTTTAAATTGA+AGG - chr6_4:8243376-8243395 None:intergenic 25.0%
! GAAATCTACTTATATGTTCT+AGG + chr6_4:8243405-8243424 Msa0974860:intron 25.0%
! CATTCAGTAATATTAACTAG+GGG - chr6_4:8243789-8243808 None:intergenic 25.0%
! GCATTCAGTAATATTAACTA+GGG - chr6_4:8243790-8243809 None:intergenic 25.0%
! TGCATTCAGTAATATTAACT+AGG - chr6_4:8243791-8243810 None:intergenic 25.0%
!! CTTAAAAATTACAGGTGTTT+TGG + chr6_4:8243820-8243839 Msa0974860:intron 25.0%
! CATAATTTCTAAGCAGAATA+TGG - chr6_4:8243985-8244004 None:intergenic 25.0%
! TCTGCTTAGAAATTATGTTA+AGG + chr6_4:8243988-8244007 Msa0974860:exon 25.0%
AGTATTTCAAGAATTGGAGA+AGG + chr6_4:8242033-8242052 Msa0974860:intron 30.0%
ATATGTTATCTCTGTTGTCT+GGG + chr6_4:8242148-8242167 Msa0974860:intron 30.0%
! CTCTTATGAAGGTAGTATTT+TGG - chr6_4:8242190-8242209 None:intergenic 30.0%
! CGGATCTTGTTTCAAAATTA+TGG + chr6_4:8242395-8242414 Msa0974860:intron 30.0%
GATGTTTATGTTATGTGTGA+TGG + chr6_4:8242468-8242487 Msa0974860:intron 30.0%
ATGACTGTAATTGTTGATCA+AGG + chr6_4:8242495-8242514 Msa0974860:intron 30.0%
ATTCCATTTCTGTTCAAGAA+AGG + chr6_4:8242547-8242566 Msa0974860:intron 30.0%
TATCCTTTCTTGAACAGAAA+TGG - chr6_4:8242553-8242572 None:intergenic 30.0%
GAAAAAGCTTCAAATGACAA+AGG - chr6_4:8242593-8242612 None:intergenic 30.0%
!!! TGTCATTTGAAGCTTTTTCA+AGG + chr6_4:8242594-8242613 Msa0974860:intron 30.0%
TTTCAAGGACAGATATCAAT+TGG + chr6_4:8242609-8242628 Msa0974860:intron 30.0%
CTGCCATGAAAAAAAAAAGA+AGG - chr6_4:8242801-8242820 None:intergenic 30.0%
!!! CTTCTTTTTTTTTTCATGGC+AGG + chr6_4:8242799-8242818 Msa0974860:intron 30.0%
CTCTTGATCTATTTGTTCAT+AGG + chr6_4:8242910-8242929 Msa0974860:intron 30.0%
GTTGGAACAAGAATTTGAAA+AGG + chr6_4:8242939-8242958 Msa0974860:intron 30.0%
GACACACTGTATTTACATTA+TGG + chr6_4:8242992-8243011 Msa0974860:CDS 30.0%
TTGTTATATTGAAGGAAGTG+TGG + chr6_4:8243033-8243052 Msa0974860:CDS 30.0%
AAATCTCCACATGAAAAAAC+TGG + chr6_4:8243142-8243161 Msa0974860:CDS 30.0%
!! AAACTGGTCATGTATTTTTG+AGG + chr6_4:8243158-8243177 Msa0974860:CDS 30.0%
TAACACGAAATATATGCATG+TGG - chr6_4:8243317-8243336 None:intergenic 30.0%
!! CTTATATGTTCTAGGCATTT+TGG + chr6_4:8243413-8243432 Msa0974860:intron 30.0%
GGTCTTTGCATTTACTTATA+TGG + chr6_4:8243567-8243586 Msa0974860:CDS 30.0%
GATCATTGTATAAAGATTGC+AGG + chr6_4:8243589-8243608 Msa0974860:CDS 30.0%
ATTGTATAAAGATTGCAGGT+TGG + chr6_4:8243593-8243612 Msa0974860:CDS 30.0%
GACATGTAATACAAAGATAG+AGG - chr6_4:8243686-8243705 None:intergenic 30.0%
TTCTTTATTCTTCAACACTC+TGG - chr6_4:8243881-8243900 None:intergenic 30.0%
TGTTTGCCTTAAACGTAAGA+TGG + chr6_4:8241652-8241671 Msa0974860:CDS 35.0%
TCGTTTCCATCTTACGTTTA+AGG - chr6_4:8241661-8241680 None:intergenic 35.0%
!! ACCACATTTTTGAAAGTCGT+AGG + chr6_4:8241757-8241776 Msa0974860:intron 35.0%
TCCTACGACTTTCAAAAATG+TGG - chr6_4:8241761-8241780 None:intergenic 35.0%
TGTAATGTTTGACAGAGATC+AGG + chr6_4:8241819-8241838 Msa0974860:intron 35.0%
GGAACGAGTATTTCAAGAAT+TGG + chr6_4:8242027-8242046 Msa0974860:intron 35.0%
ATGCACAAAGGATAACATAC+TGG - chr6_4:8242110-8242129 None:intergenic 35.0%
GATATGTTATCTCTGTTGTC+TGG + chr6_4:8242147-8242166 Msa0974860:intron 35.0%
TGCATTTCTCCACAATATCA+AGG - chr6_4:8242329-8242348 None:intergenic 35.0%
! GATGTGCATTTTACAATTGC+AGG + chr6_4:8242861-8242880 Msa0974860:CDS 35.0%
! TTTTACAATTGCAGGTTCCT+TGG + chr6_4:8242869-8242888 Msa0974860:CDS 35.0%
TTTACAATTGCAGGTTCCTT+GGG + chr6_4:8242870-8242889 Msa0974860:CDS 35.0%
TTTGTTCATAGGTTAGACGT+TGG + chr6_4:8242921-8242940 Msa0974860:intron 35.0%
!!! ACATGACCAGTTTTTTCATG+TGG - chr6_4:8243151-8243170 None:intergenic 35.0%
CCAGTTTCTCAAACTATTAC+TGG - chr6_4:8243278-8243297 None:intergenic 35.0%
CCAGTAATAGTTTGAGAAAC+TGG + chr6_4:8243275-8243294 Msa0974860:intron 35.0%
GGAAGTTCATATGCATATCT+TGG + chr6_4:8243517-8243536 Msa0974860:CDS 35.0%
GTTCATATGCATATCTTGGA+AGG + chr6_4:8243521-8243540 Msa0974860:CDS 35.0%
! AGATTGCAGGTTGGAATAAT+TGG + chr6_4:8243602-8243621 Msa0974860:CDS 35.0%
! GATTGCAGGTTGGAATAATT+GGG + chr6_4:8243603-8243622 Msa0974860:CDS 35.0%
! ATTGCAGGTTGGAATAATTG+GGG + chr6_4:8243604-8243623 Msa0974860:CDS 35.0%
!! AAATTACAGGTGTTTTGGAC+CGG + chr6_4:8243825-8243844 Msa0974860:intron 35.0%
GTTGAAGAATAAAGAAGCTG+AGG + chr6_4:8243885-8243904 Msa0974860:CDS 35.0%
TTGCTCAAAGAATGGACATA+AGG + chr6_4:8243956-8243975 Msa0974860:CDS 35.0%
TGTTAAGGACACTTGAAACA+TGG + chr6_4:8244003-8244022 Msa0974860:three_prime_UTR 35.0%
AACGTAAGATGGAAACGATG+TGG + chr6_4:8241663-8241682 Msa0974860:CDS 40.0%
AAGATGGAAACGATGTGGAA+AGG + chr6_4:8241668-8241687 Msa0974860:CDS 40.0%
TTTGACAGAGATCAGGATTC+AGG + chr6_4:8241826-8241845 Msa0974860:intron 40.0%
GGGTTTAGAAGAAGACAAGA+AGG + chr6_4:8241898-8241917 Msa0974860:CDS 40.0%
TTGAAATACTCGTTCCTCCA+TGG - chr6_4:8242023-8242042 None:intergenic 40.0%
TCTCAAAGAGAGATGCACAA+AGG - chr6_4:8242122-8242141 None:intergenic 40.0%
! CAGACACAAAATCTAGGACT+AGG - chr6_4:8242236-8242255 None:intergenic 40.0%
GACATGCAGACACAAAATCT+AGG - chr6_4:8242242-8242261 None:intergenic 40.0%
TGTCACGATCCTTGATATTG+TGG + chr6_4:8242317-8242336 Msa0974860:intron 40.0%
!!! TTTTTTTCATGGCAGGGTTC+AGG + chr6_4:8242806-8242825 Msa0974860:intron 40.0%
!!! TTTTTTCATGGCAGGGTTCA+GGG + chr6_4:8242807-8242826 Msa0974860:intron 40.0%
!! GGAAGTGTGGACTTCATTTT+TGG + chr6_4:8243046-8243065 Msa0974860:CDS 40.0%
AGTGGATATGACAATGTTCC+AGG - chr6_4:8243087-8243106 None:intergenic 40.0%
TCAACATGTGTAGTGTCATC+TGG + chr6_4:8243185-8243204 Msa0974860:intron 40.0%
CAACATGTGTAGTGTCATCT+GGG + chr6_4:8243186-8243205 Msa0974860:intron 40.0%
TGTCAGACAGTGATACATGT+CGG + chr6_4:8243338-8243357 Msa0974860:intron 40.0%
!! AATTACAGGTGTTTTGGACC+GGG + chr6_4:8243826-8243845 Msa0974860:intron 40.0%
ATCCAGAACCACAAAAACCT+TGG + chr6_4:8243932-8243951 Msa0974860:CDS 40.0%
ATGGAAACGATGTGGAAAGG+AGG + chr6_4:8241671-8241690 Msa0974860:CDS 45.0%
AGAAGAAGACAAGAAGGCCA+TGG + chr6_4:8241904-8241923 Msa0974860:CDS 45.0%
CTTCCTGTCAAACTCCTTCT+TGG - chr6_4:8241999-8242018 None:intergenic 45.0%
CAAGAAGGAGTTTGACAGGA+AGG + chr6_4:8241997-8242016 Msa0974860:CDS 45.0%
CCACAACAAGACTGCAATTG+AGG - chr6_4:8242372-8242391 None:intergenic 45.0%
!! CCTCAATTGCAGTCTTGTTG+TGG + chr6_4:8242369-8242388 Msa0974860:intron 45.0%
ATATCCACTGCAAGTCTGCA+GGG + chr6_4:8243098-8243117 Msa0974860:CDS 45.0%
GTCAGTATCATTGTCGAGTC+TGG - chr6_4:8243246-8243265 None:intergenic 45.0%
GATTGCAGATGTGCTATCAC+AGG + chr6_4:8243487-8243506 Msa0974860:intron 45.0%
AGATGTGCTATCACAGGCAA+TGG + chr6_4:8243493-8243512 Msa0974860:intron 45.0%
ATGCATATCTTGGAAGGCCA+TGG + chr6_4:8243527-8243546 Msa0974860:CDS 45.0%
TGCATATCTTGGAAGGCCAT+GGG + chr6_4:8243528-8243547 Msa0974860:CDS 45.0%
GCAAAGACCACTCTTCCAAA+AGG - chr6_4:8243556-8243575 None:intergenic 45.0%
! AGCCAAGGTTTTTGTGGTTC+TGG - chr6_4:8243937-8243956 None:intergenic 45.0%
! TGAGCAAGCCAAGGTTTTTG+TGG - chr6_4:8243943-8243962 None:intergenic 45.0%
!! ACCTTGGCTTGCTCAAAGAA+TGG + chr6_4:8243948-8243967 Msa0974860:CDS 45.0%
TCCATTCTTTGAGCAAGCCA+AGG - chr6_4:8243952-8243971 None:intergenic 45.0%
GTATTCATTGTGCCACCGAG+CGG + chr6_4:8241624-8241643 Msa0974860:CDS 50.0%
AAGGCAAACATTTCGCCGCT+CGG - chr6_4:8241642-8241661 None:intergenic 50.0%
GAAACGATGTGGAAAGGAGG+AGG + chr6_4:8241674-8241693 Msa0974860:CDS 50.0%
GACAGAGATCAGGATTCAGG+AGG + chr6_4:8241829-8241848 Msa0974860:intron 50.0%
AGAAGACAAGAAGGCCATGG+AGG + chr6_4:8241907-8241926 Msa0974860:CDS 50.0%
CTTGTCAGCCTTCTTCTCCA+TGG - chr6_4:8241972-8241991 None:intergenic 50.0%
GGAGAAGAAGGCTGACAAGA+AGG + chr6_4:8241973-8241992 Msa0974860:CDS 50.0%
AGGCCAAGAAGGAGTTTGAC+AGG + chr6_4:8241993-8242012 Msa0974860:CDS 50.0%
!! TTGCAGTCTTGTTGTGGTCG+CGG + chr6_4:8242375-8242394 Msa0974860:intron 50.0%
ACAATTGCAGGTTCCTTGGG+TGG + chr6_4:8242873-8242892 Msa0974860:CDS 50.0%
GTAAAGTTACCTGCCACCCA+AGG - chr6_4:8242889-8242908 None:intergenic 50.0%
CATATCCACTGCAAGTCTGC+AGG + chr6_4:8243097-8243116 Msa0974860:CDS 50.0%
TGTGCTATCACAGGCAATGG+AGG + chr6_4:8243496-8243515 Msa0974860:CDS 50.0%
GCATATCTTGGAAGGCCATG+GGG + chr6_4:8243529-8243548 Msa0974860:CDS 50.0%
ACTCTTCCAAAAGGTCCCCA+TGG - chr6_4:8243547-8243566 None:intergenic 50.0%
!! ATGGGGACCTTTTGGAAGAG+TGG + chr6_4:8243546-8243565 Msa0974860:CDS 50.0%
CGTTTCGAGGGACAAAAACC+CGG - chr6_4:8243847-8243866 None:intergenic 50.0%
! CGGGTTTTTGTCCCTCGAAA+CGG + chr6_4:8243845-8243864 Msa0974860:CDS 50.0%
! GGGTTTTTGTCCCTCGAAAC+GGG + chr6_4:8243846-8243865 Msa0974860:CDS 50.0%
TCCCTCGAAACGGGTGAAAT+GGG + chr6_4:8243855-8243874 Msa0974860:CDS 50.0%
GACCAAGGCCATGGAGAAGA+AGG + chr6_4:8241961-8241980 Msa0974860:CDS 55.0%
AGCCTTCTTCTCCATGGCCT+TGG - chr6_4:8241966-8241985 None:intergenic 55.0%
GGCTGACAAGAAGGCCAAGA+AGG + chr6_4:8241982-8242001 Msa0974860:CDS 55.0%
GGAGTTTGACAGGAAGGCCA+TGG + chr6_4:8242003-8242022 Msa0974860:CDS 55.0%
GTTTGACAGGAAGGCCATGG+AGG + chr6_4:8242006-8242025 Msa0974860:CDS 55.0%
TGGCAATAGCACTGCACTCC+TGG + chr6_4:8243066-8243085 Msa0974860:CDS 55.0%
TGAACCCTGCAGACTTGCAG+TGG - chr6_4:8243105-8243124 None:intergenic 55.0%
GTCCCTCGAAACGGGTGAAA+TGG + chr6_4:8243854-8243873 Msa0974860:CDS 55.0%
GCCCATTTCACCCGTTTCGA+GGG - chr6_4:8243859-8243878 None:intergenic 55.0%
GCAAACATTTCGCCGCTCGG+TGG - chr6_4:8241639-8241658 None:intergenic 60.0%
GGCCATGGAGGAGTTGCAGA+AGG + chr6_4:8241919-8241938 Msa0974860:CDS 60.0%
GGCCTTCTGCAACTCCTCCA+TGG - chr6_4:8241924-8241943 None:intergenic 60.0%
TCGCAAGAGGACCAAGGCCA+TGG + chr6_4:8241952-8241971 Msa0974860:CDS 60.0%
TTGCAGGTTCCTTGGGTGGC+AGG + chr6_4:8242877-8242896 Msa0974860:CDS 60.0%
! GGAAGGCCATGGGGACCTTT+TGG + chr6_4:8243538-8243557 Msa0974860:CDS 60.0%
GGCCCATTTCACCCGTTTCG+AGG - chr6_4:8243860-8243879 None:intergenic 60.0%
GGAGGAGTTGCAGAAGGCCG+CGG + chr6_4:8241925-8241944 Msa0974860:CDS 65.0%
GGAGGCTCGCAAGAGGACCA+AGG + chr6_4:8241946-8241965 Msa0974860:CDS 65.0%
GCAGGGTTCAGGGCAAGCAG+TGG + chr6_4:8242817-8242836 Msa0974860:intron 65.0%
GGAGTTGCAGAAGGCCGCGG+AGG + chr6_4:8241928-8241947 Msa0974860:CDS 70.0%
GGTCCTCTTGCGAGCCTCCG+CGG - chr6_4:8241945-8241964 None:intergenic 70.0%
AGGCCGCGGAGGCTCGCAAG+AGG + chr6_4:8241939-8241958 Msa0974860:CDS 75.0%
Chromosome Type Strat End Strand Name
chr6_4 gene 8241621 8244097 8241621 ID=Msa0974860;Name=Msa0974860
chr6_4 mRNA 8241621 8244097 8241621 ID=Msa0974860-mRNA-1;Parent=Msa0974860;Name=Msa0974860-mRNA-1;_AED=0.35;_eAED=0.36;_QI=0|0|0.16|1|1|1|6|101|303
chr6_4 exon 8241621 8241729 8241621 ID=Msa0974860-mRNA-1:exon:3043;Parent=Msa0974860-mRNA-1
chr6_4 exon 8241834 8242033 8241834 ID=Msa0974860-mRNA-1:exon:3044;Parent=Msa0974860-mRNA-1
chr6_4 exon 8242821 8242898 8242821 ID=Msa0974860-mRNA-1:exon:3045;Parent=Msa0974860-mRNA-1
chr6_4 exon 8242992 8243179 8242992 ID=Msa0974860-mRNA-1:exon:3046;Parent=Msa0974860-mRNA-1
chr6_4 exon 8243495 8243668 8243495 ID=Msa0974860-mRNA-1:exon:3047;Parent=Msa0974860-mRNA-1
chr6_4 exon 8243834 8244097 8243834 ID=Msa0974860-mRNA-1:exon:3048;Parent=Msa0974860-mRNA-1
chr6_4 CDS 8241621 8241729 8241621 ID=Msa0974860-mRNA-1:cds;Parent=Msa0974860-mRNA-1
chr6_4 CDS 8241834 8242033 8241834 ID=Msa0974860-mRNA-1:cds;Parent=Msa0974860-mRNA-1
chr6_4 CDS 8242821 8242898 8242821 ID=Msa0974860-mRNA-1:cds;Parent=Msa0974860-mRNA-1
chr6_4 CDS 8242992 8243179 8242992 ID=Msa0974860-mRNA-1:cds;Parent=Msa0974860-mRNA-1
chr6_4 CDS 8243495 8243668 8243495 ID=Msa0974860-mRNA-1:cds;Parent=Msa0974860-mRNA-1
chr6_4 CDS 8243834 8243996 8243834 ID=Msa0974860-mRNA-1:cds;Parent=Msa0974860-mRNA-1
chr6_4 three_prime_UTR 8243997 8244097 8243997 ID=Msa0974860-mRNA-1:three_prime_utr;Parent=Msa0974860-mRNA-1
Gene Sequence

>Msa0974860

ATGGTATTCATTGTGCCACCGAGCGGCGAAATGTTTGCCTTAAACGTAAGATGGAAACGATGTGGAAAGGAGGAGGCGTATGAATATTTCAAGTACTTAGATGTGGAAAAGATCAGGATTCAGGAGGACATCTTTACTGAGTTGAAGCACGAATTCAAACAAGAATATAAGGAGGGTTTAGAAGAAGACAAGAAGGCCATGGAGGAGTTGCAGAAGGCCGCGGAGGCTCGCAAGAGGACCAAGGCCATGGAGAAGAAGGCTGACAAGAAGGCCAAGAAGGAGTTTGACAGGAAGGCCATGGAGGAACGAGGTTCAGGGCAAGCAGTGGCAGTTAGAGTAACAGTAGATAGATGTGCATTTTACAATTGCAGGTTCCTTGGGTGGCAGGACACACTGTATTTACATTATGGCAAACAATATTTGAAAGATTGTTATATTGAAGGAAGTGTGGACTTCATTTTTGGCAATAGCACTGCACTCCTGGAACATTGTCATATCCACTGCAAGTCTGCAGGGTTCATAACTGCACAGAGCAGAAAATCTCCACATGAAAAAACTGGTCATGTATTTTTGAGATGTGCTATCACAGGCAATGGAGGAAGTTCATATGCATATCTTGGAAGGCCATGGGGACCTTTTGGAAGAGTGGTCTTTGCATTTACTTATATGGATCATTGTATAAAGATTGCAGGTTGGAATAATTGGGGAAAAGTTGAGAATGAAAAAAGTGCTTGTTTCTATGAATACAAGTGTTTTGGACCGGGTTTTTGTCCCTCGAAACGGGTGAAATGGGCCAGAGTGTTGAAGAATAAAGAAGCTGAGGAGTTTCTCATGCATAGTTTCATTGATCCAGAACCACAAAAACCTTGGCTTGCTCAAAGAATGGACATAAGGATTCCATATTCTGCTTAG
Protein sequence

>Msa0974860

MVFIVPPSGEMFALNVRWKRCGKEEAYEYFKYLDVEKIRIQEDIFTELKHEFKQEYKEGLEEDKKAMEELQKAAEARKRTKAMEKKADKKAKKEFDRKAMEERGSGQAVAVRVTVDRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSPHEKTGHVFLRCAITGNGGSSYAYLGRPWGPFGRVVFAFTYMDHCIKIAGWNNWGKVENEKSACFYEYKCFGPGFCPSKRVKWARVLKNKEAEEFLMHSFIDPEPQKPWLAQRMDIRIPYSA*