AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1436040


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436040 MtrunA17_Chr8g0337241 97.283 184 5 0 1 184 96 279 1.90e-132 376
Msa1436040 MtrunA17_Chr8g0337231 93.443 183 12 0 1 183 133 315 2.06e-125 359
Msa1436040 MtrunA17_Chr8g0337251 96.875 96 1 2 184 278 37 131 4.73e-54 171
Msa1436040 MtrunA17_Chr6g0457691 39.674 184 100 3 1 182 551 725 4.28e-34 130
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1436040 AT5G17660.1 63.784 185 61 2 1 184 128 307 2.37e-85 258

Find 119 sgRNAs with CRISPR-Local

Find 480 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
ATCAACTGCTTAAAAGAAAT+TGG 0.087540 tig0027849:-3154 None:intergenic
GAAAGCCCTAAACTTTATTT+AGG 0.114319 tig0027849:+8390 Msa1436040:three_prime_UTR
TTCGGCAAGCATGGAAAATT+TGG 0.154435 tig0027849:+8127 Msa1436040:CDS
TCACGTCGATATTGTTAAAT+TGG 0.162826 tig0027849:-334 None:intergenic
ACAAGAAATGTCTGCAAATA+AGG 0.255944 tig0027849:-8427 None:intergenic
AAGTTTAAGCATGGAAAATT+TGG 0.274309 tig0027849:+8091 Msa1436040:CDS
AAGTTGCATATTTAATATAT+TGG 0.284521 tig0027849:-8174 None:intergenic
ACAGGCCCTAAATAAAGTTT+AGG 0.294142 tig0027849:-8396 None:intergenic
AACTTTATTTAGGGCCTGTT+TGG 0.295894 tig0027849:+8400 Msa1436040:three_prime_UTR
AAAGCCCTAAACTTTATTTA+GGG 0.309832 tig0027849:+8391 Msa1436040:three_prime_UTR
GTTCTGCTACTGCCACTACT+TGG 0.322586 tig0027849:-521 None:intergenic
TTTGGCAAACATGGAAAATT+CGG 0.327760 tig0027849:+8109 Msa1436040:CDS
CCCAAATGATTTCTCGCTTT+AGG 0.331633 tig0027849:-2784 None:intergenic
ACCTAAAGCGAGAAATCATT+TGG 0.332484 tig0027849:+2783 Msa1436040:CDS
TCAACTGCTTAAAAGAAATT+GGG 0.339051 tig0027849:-3153 None:intergenic
GCAGGAGGGGTGGCTGCATA+TGG 0.341128 tig0027849:+8019 Msa1436040:CDS
GTGCATCAACTTCATCTAAC+TGG 0.350365 tig0027849:-4059 None:intergenic
ATCATTTGGGATTGGAAATA+CGG 0.352445 tig0027849:+2797 Msa1436040:CDS
TAAGCAACCCTATGGGGATT+AGG 0.353856 tig0027849:+4139 Msa1436040:CDS
AGAGATTGAAAGAGAAGAAT+AGG 0.359221 tig0027849:-461 None:intergenic
GCACCTCATGGCTATCCTTC+AGG 0.362664 tig0027849:+7526 Msa1436040:CDS
AGTCACAAGAAGAAGTTATA+TGG 0.366452 tig0027849:+367 Msa1436040:five_prime_UTR
TATGTCATATTTCAGAATTT+GGG 0.367238 tig0027849:+737 Msa1436040:intron
CAGGCCCTAAATAAAGTTTA+GGG 0.368817 tig0027849:-8395 None:intergenic
CTTGCAGTTAGTTTCGATTT+CGG 0.379115 tig0027849:+3195 Msa1436040:CDS
TGGTCAAGCGTGCTGAGTTA+TGG 0.382252 tig0027849:+2982 Msa1436040:CDS
AAAGGGCATGGTGCTGGTAT+AGG 0.383934 tig0027849:+7986 Msa1436040:intron
GCAACATACTAAGTTTCAAT+TGG 0.388112 tig0027849:+8291 Msa1436040:three_prime_UTR
GCAGGAGGATATCCACCTTC+TGG 0.393497 tig0027849:+7475 Msa1436040:CDS
TTGCCACTCATGGTAGATAT+TGG 0.411854 tig0027849:+2200 Msa1436040:exon
GGTATAGGAGGATTGTTTGC+AGG 0.412758 tig0027849:+8001 Msa1436040:CDS
ATTTGGGTCATGGCAGAATC+AGG 0.419446 tig0027849:+753 Msa1436040:five_prime_UTR
GGTCAAGCGTGCTGAGTTAT+GGG 0.420860 tig0027849:+2983 Msa1436040:CDS
GCAAATAAGGCAATCCAAAC+AGG 0.421761 tig0027849:-8414 None:intergenic
CTTATTAGATGAATAATGTA+TGG 0.424077 tig0027849:+8226 Msa1436040:three_prime_UTR
GGTGGATATCCTCCTGCATT+TGG 0.428252 tig0027849:-7469 None:intergenic
CCTCAATCTCTCTTACAACT+TGG 0.429111 tig0027849:+605 Msa1436040:five_prime_UTR
GGGATTGGAAATACGGCAAA+AGG 0.432298 tig0027849:+2804 Msa1436040:CDS
CATGGAAAATTTGGCAAACA+TGG 0.434225 tig0027849:+8100 Msa1436040:CDS
TTCTGCTACTGCCACTACTT+GGG 0.447482 tig0027849:-520 None:intergenic
CACAATTTCTTTGAAGCAGT+TGG 0.447553 tig0027849:+8460 Msa1436040:three_prime_UTR
TAGGAAGAAAGAGGTCGAAA+GGG 0.450194 tig0027849:-442 None:intergenic
AGGAGGATTGTTTGCAGGAG+GGG 0.453584 tig0027849:+8006 Msa1436040:CDS
AGCGAGAAATCATTTGGGAT+TGG 0.464188 tig0027849:+2789 Msa1436040:CDS
TTCCAGTCTGGTACTTGTGC+AGG 0.467660 tig0027849:-2155 None:intergenic
CCTAAAGCGAGAAATCATTT+GGG 0.468102 tig0027849:+2784 Msa1436040:CDS
TCTACCATGAGTGGCAATGC+AGG 0.471708 tig0027849:-2194 None:intergenic
CATGGAAAATTCGGCAAGCA+TGG 0.475624 tig0027849:+8118 Msa1436040:CDS
TTTAACAATATCGACGTGAA+TGG 0.475714 tig0027849:+338 Msa1436040:five_prime_UTR
TAATTTATCTCCCGGAGGAC+AGG 0.477829 tig0027849:+3640 Msa1436040:CDS
GCAGCGGCAGGTTTCTTATG+TGG 0.479775 tig0027849:+2746 Msa1436040:CDS
GCAAAGACCTGGTTCCAGTC+TGG 0.484688 tig0027849:-2167 None:intergenic
ATGGTTGTTAAGCAACCCTA+TGG 0.489763 tig0027849:+4131 Msa1436040:CDS
CTCTCAGTCCTAATCCCCAT+AGG 0.490442 tig0027849:-4147 None:intergenic
AGGATTGTTTGCAGGAGGGG+TGG 0.492855 tig0027849:+8009 Msa1436040:CDS
TAGGAGGATTGTTTGCAGGA+GGG 0.495487 tig0027849:+8005 Msa1436040:CDS
TGAGTTATGGGTAAAAGATC+TGG 0.497316 tig0027849:+2995 Msa1436040:CDS
ATTGTAGATAATTTATCTCC+CGG 0.499583 tig0027849:+3632 Msa1436040:CDS
CAGAAAATATACCTGTCCTC+CGG 0.501225 tig0027849:-3651 None:intergenic
ATAGGAAGAAAGAGGTCGAA+AGG 0.501478 tig0027849:-443 None:intergenic
TTCTTCTTTGTCCCAAGTAG+TGG 0.503579 tig0027849:+509 Msa1436040:five_prime_UTR
AAATAATGTCAGGCAGCGGC+AGG 0.509305 tig0027849:+2734 Msa1436040:intron
AAGCTCACAACTTGTTGCAT+TGG 0.510644 tig0027849:+572 Msa1436040:five_prime_UTR
AGTTGTGAGCTTCGTAATTG+TGG 0.514100 tig0027849:-561 None:intergenic
CCAAGTTGTAAGAGAGATTG+AGG 0.515832 tig0027849:-605 None:intergenic
CCATCTTATCATGCACCTCA+TGG 0.531692 tig0027849:+7514 Msa1436040:CDS
AGAGAAGAATAGGAAGAAAG+AGG 0.532332 tig0027849:-451 None:intergenic
GAACATACAGAGAAAGAAGA+AGG 0.534792 tig0027849:-788 None:intergenic
GGATATCCTCCTGCATTTGG+TGG 0.534983 tig0027849:-7466 None:intergenic
GGAGGTTATCATCATGGTCA+TGG 0.543451 tig0027849:+8067 Msa1436040:CDS
CAACTGCTTCAAAGAAATTG+TGG 0.547994 tig0027849:-8459 None:intergenic
TCTCAGTCCTAATCCCCATA+GGG 0.549156 tig0027849:-4146 None:intergenic
AGAAAATATACCTGTCCTCC+GGG 0.550378 tig0027849:-3650 None:intergenic
CACCATCTCTCACATGGACA+TGG 0.554526 tig0027849:+8046 Msa1436040:CDS
ATGGGTAAAAGATCTGGCTC+TGG 0.555239 tig0027849:+3001 Msa1436040:CDS
CCATGAGGTGCATGATAAGA+TGG 0.562052 tig0027849:-7514 None:intergenic
TGATAAGATGGTTGCTGATG+AGG 0.562856 tig0027849:-7502 None:intergenic
GGGCATGGTGCTGGTATAGG+AGG 0.563704 tig0027849:+7989 Msa1436040:intron
TGGTTGTTAAGCAACCCTAT+GGG 0.568560 tig0027849:+4132 Msa1436040:CDS
ATAGGAGGATTGTTTGCAGG+AGG 0.570269 tig0027849:+8004 Msa1436040:CDS
CTCCTGCACAAGTACCAGAC+TGG 0.570890 tig0027849:+2153 Msa1436040:five_prime_UTR
TTTGGTGGATATTGTTGTGA+AGG 0.571075 tig0027849:-7451 None:intergenic
GGACATGGAGGTTATCATCA+TGG 0.574751 tig0027849:+8061 Msa1436040:CDS
AGACCCTGCATTGCCACTCA+TGG 0.575995 tig0027849:+2190 Msa1436040:exon
CAACAATATCCACCAAATGC+AGG 0.576533 tig0027849:+7457 Msa1436040:CDS
GGTCATGGAAAGTTTAAGCA+TGG 0.576705 tig0027849:+8082 Msa1436040:CDS
CTCATGGTAGATATTGGATG+TGG 0.587804 tig0027849:+2206 Msa1436040:exon
GAAACTAACTGCAAGGGACC+AGG 0.589756 tig0027849:-3187 None:intergenic
CGAAATCGAAACTAACTGCA+AGG 0.590115 tig0027849:-3194 None:intergenic
ATGGAAAATTTGGCAAGGGA+TGG 0.592208 tig0027849:+8137 Msa1436040:CDS
GAGATTCATGCTGAATTCGA+AGG 0.592570 tig0027849:+4171 Msa1436040:CDS
ATGCAGGGTCTGCAAAGACC+TGG 0.597840 tig0027849:-2178 None:intergenic
CAACTGCTTAAAAGAAATTG+GGG 0.598384 tig0027849:-3152 None:intergenic
ATATTTCAGAATTTGGGTCA+TGG 0.598590 tig0027849:+743 Msa1436040:intron
CAGTTGATAGAATCATATCC+TGG 0.600339 tig0027849:+3169 Msa1436040:CDS
CAAGCATGGAAAATTTGGCA+AGG 0.602395 tig0027849:+8132 Msa1436040:CDS
AAGGTTGTATGAGAAGAAGC+AGG 0.607540 tig0027849:+4209 Msa1436040:CDS
CTCCATGTCCATGTGAGAGA+TGG 0.612551 tig0027849:-8048 None:intergenic
ACAAGTACCAGACTGGAACC+AGG 0.613511 tig0027849:+2160 Msa1436040:five_prime_UTR
CTACCATGAGTGGCAATGCA+GGG 0.613691 tig0027849:-2193 None:intergenic
TAAAGGCTTAATACATACGC+AGG 0.622147 tig0027849:-285 None:intergenic
AAGGAGTGAAAATCTATCGA+AGG 0.623652 tig0027849:+4190 Msa1436040:CDS
TATTGTGTGACAGTGAAGGA+TGG 0.628877 tig0027849:+4112 Msa1436040:CDS
ACAATCTGATGCACTTGAAG+TGG 0.636353 tig0027849:+4020 Msa1436040:CDS
AAGCATGGAAAATTTGGCAA+GGG 0.636513 tig0027849:+8133 Msa1436040:CDS
GATATATTGTGTGACAGTGA+AGG 0.638001 tig0027849:+4108 Msa1436040:CDS
AAGGGATGGAAGTGATGCAG+AGG 0.640125 tig0027849:+8151 Msa1436040:exon
GGTTGTTAAGCAACCCTATG+GGG 0.644610 tig0027849:+4133 Msa1436040:CDS
GGTTCTCACCATCTCTCACA+TGG 0.646475 tig0027849:+8040 Msa1436040:CDS
GAAATCGAAACTAACTGCAA+GGG 0.651078 tig0027849:-3193 None:intergenic
CATCCAATATCTACCATGAG+TGG 0.659846 tig0027849:-2203 None:intergenic
CATCTCTCACATGGACATGG+AGG 0.667161 tig0027849:+8049 Msa1436040:CDS
CAATATCCACCAAATGCAGG+AGG 0.677238 tig0027849:+7460 Msa1436040:CDS
TCTACAATAGTACCGACCAA+AGG 0.679747 tig0027849:-3617 None:intergenic
TGAGAGTGTTAACATTAGTG+CGG 0.687588 tig0027849:-413 None:intergenic
TGCTGATGAGGATAACCAGA+AGG 0.692416 tig0027849:-7490 None:intergenic
TGATGAGGATAACCAGAAGG+TGG 0.699953 tig0027849:-7487 None:intergenic
GTAGATAATTTATCTCCCGG+AGG 0.720822 tig0027849:+3635 Msa1436040:CDS
GTACCTGAAGGATAGCCATG+AGG 0.759088 tig0027849:-7529 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TAAATGATAATTATAGTATA+GGG - tig0027849:896-915 None:intergenic 10.0%
!! ATAAATGATAATTATAGTAT+AGG - tig0027849:897-916 None:intergenic 10.0%
!! ATGTTTATATAATATAATGA+AGG - tig0027849:1859-1878 None:intergenic 10.0%
!! TTGTATAAAATATATACATT+TGG + tig0027849:1880-1899 Msa1436040:intron 10.0%
!!! TTTCTAAATGTTTTTTTTAT+TGG - tig0027849:4490-4509 None:intergenic 10.0%
!!! ATATTTTAATCATATATCAA+TGG - tig0027849:5169-5188 None:intergenic 10.0%
!! TTGATATATGATTAAAATAT+TGG + tig0027849:5169-5188 Msa1436040:intron 10.0%
!! TTATATCAAAGATTTATTTA+CGG + tig0027849:5297-5316 Msa1436040:intron 10.0%
!! ATTAAATAATAGTAAGAAAA+AGG + tig0027849:5510-5529 Msa1436040:intron 10.0%
!! TTAAATAATAGTAAGAAAAA+GGG + tig0027849:5511-5530 Msa1436040:intron 10.0%
!!! CATTAAATAATTTTTGTATT+TGG + tig0027849:5706-5725 Msa1436040:intron 10.0%
!!! ATATTACATTATTTTTTTAG+GGG - tig0027849:5822-5841 None:intergenic 10.0%
!!! CATATTACATTATTTTTTTA+GGG - tig0027849:5823-5842 None:intergenic 10.0%
!!! ACATATTACATTATTTTTTT+AGG - tig0027849:5824-5843 None:intergenic 10.0%
!! AATTATATAACTATAAGAAT+AGG + tig0027849:6335-6354 Msa1436040:intron 10.0%
!!! TGATTTATTGTTTTTATAAA+GGG + tig0027849:7969-7988 Msa1436040:intron 10.0%
!!! TACATTTCAGATTTTTTTAA+AGG - tig0027849:305-324 None:intergenic 15.0%
!!! ATTTTATCCTTATTCATTAT+AGG + tig0027849:845-864 Msa1436040:intron 15.0%
!!! GATTTTATCATATTATTTGT+AGG - tig0027849:1123-1142 None:intergenic 15.0%
!! CAATTATTTAGATTTAAAGA+GGG + tig0027849:1361-1380 Msa1436040:intron 15.0%
!! AATTATTTAGATTTAAAGAG+GGG + tig0027849:1362-1381 Msa1436040:intron 15.0%
!! ACTAAAACAACAAATTTATA+TGG + tig0027849:1814-1833 Msa1436040:intron 15.0%
!! CAATATATCATTCATAAAAT+TGG - tig0027849:2012-2031 None:intergenic 15.0%
!!! AATCATAAACTTTATTTTGA+CGG + tig0027849:3039-3058 Msa1436040:intron 15.0%
!!! GATATTTTTTCTTTAAATGT+GGG - tig0027849:3574-3593 None:intergenic 15.0%
!!! TGATATTTTTTCTTTAAATG+TGG - tig0027849:3575-3594 None:intergenic 15.0%
!! TTAACTCATAATCATATTTA+TGG + tig0027849:3903-3922 Msa1436040:intron 15.0%
!! TATATGATTAAAATATTGGA+TGG + tig0027849:5173-5192 Msa1436040:intron 15.0%
!! ATTAAAATTAACAAGACAAA+TGG - tig0027849:5228-5247 None:intergenic 15.0%
!!! CAAACTATATCATTTTTTTA+GGG - tig0027849:5420-5439 None:intergenic 15.0%
!!! ACAAACTATATCATTTTTTT+AGG - tig0027849:5421-5440 None:intergenic 15.0%
!! TTATTAATCAAACAAATCTT+TGG - tig0027849:5619-5638 None:intergenic 15.0%
!!! TAAGCAAAAAACAATTTTTT+AGG + tig0027849:5883-5902 Msa1436040:intron 15.0%
!! AAAAAATTGTATATTTGAGA+AGG + tig0027849:5924-5943 Msa1436040:intron 15.0%
!! TTTCTTATAATGATATAGAT+AGG - tig0027849:6167-6186 None:intergenic 15.0%
!! ATATTGAAATTTACAAAGAA+TGG - tig0027849:6564-6583 None:intergenic 15.0%
!! TTTATTACTGATAACAAATT+AGG - tig0027849:7565-7584 None:intergenic 15.0%
!! AAAATCGAATATATAGATAA+AGG - tig0027849:7644-7663 None:intergenic 15.0%
!!! CTGATTTATTGTTTTTATAA+AGG + tig0027849:7968-7987 Msa1436040:intron 15.0%
!! AAGTTGCATATTTAATATAT+TGG - tig0027849:8177-8196 None:intergenic 15.0%
!! ATTATATTATCCGTTTAAAG+TGG - tig0027849:664-683 None:intergenic 20.0%
!! TTATGTCATATTTCAGAATT+TGG + tig0027849:736-755 Msa1436040:intron 20.0%
!! TATGTCATATTTCAGAATTT+GGG + tig0027849:737-756 Msa1436040:intron 20.0%
!! AATATGAGAAACATTTGAAT+TGG - tig0027849:828-847 None:intergenic 20.0%
!! ATCTAATCCTATAATGAATA+AGG - tig0027849:855-874 None:intergenic 20.0%
!! TTCATTAGCAAATCAAAATA+GGG - tig0027849:951-970 None:intergenic 20.0%
!! TTTCATTAGCAAATCAAAAT+AGG - tig0027849:952-971 None:intergenic 20.0%
!!! AATGAACATCTTTTAAAAAG+GGG - tig0027849:980-999 None:intergenic 20.0%
!!! GAATGAACATCTTTTAAAAA+GGG - tig0027849:981-1000 None:intergenic 20.0%
!! CCTCTTTAAATCTAAATAAT+TGG - tig0027849:1363-1382 None:intergenic 20.0%
!! CCAATTATTTAGATTTAAAG+AGG + tig0027849:1360-1379 Msa1436040:intron 20.0%
!! ATTATTTAGATTTAAAGAGG+GGG + tig0027849:1363-1382 Msa1436040:intron 20.0%
!! AAGGTGAATTTATAATATAC+AGG - tig0027849:1519-1538 None:intergenic 20.0%
!! GAAGAAAAAAATATCATTAC+AGG - tig0027849:2128-2147 None:intergenic 20.0%
!! TTAGCATACATATTAATGAT+TGG + tig0027849:2294-2313 Msa1436040:intron 20.0%
!! AGTAAATTGCACAATATTTA+TGG - tig0027849:3705-3724 None:intergenic 20.0%
!! TACACTAATAGTAAGAAAAA+TGG - tig0027849:3815-3834 None:intergenic 20.0%
!! TTACTATTAGTGTAAATGTA+TGG + tig0027849:3821-3840 Msa1436040:intron 20.0%
!! TATATACTGAAGTTAAAAGA+TGG + tig0027849:4778-4797 Msa1436040:intron 20.0%
!!! ACTTATTGCTATTTTTTTGT+TGG - tig0027849:5022-5041 None:intergenic 20.0%
!!! TCAGTTAGTTTGAAAATTAA+AGG - tig0027849:5335-5354 None:intergenic 20.0%
!!! AGATAGAATATGTTATTTTG+TGG + tig0027849:6033-6052 Msa1436040:intron 20.0%
!!! GATAGAATATGTTATTTTGT+GGG + tig0027849:6034-6053 Msa1436040:intron 20.0%
!!! ATAGAATATGTTATTTTGTG+GGG + tig0027849:6035-6054 Msa1436040:intron 20.0%
!! AAATCCAATTTAAAAACAAC+CGG + tig0027849:6062-6081 Msa1436040:intron 20.0%
!!! ACATTTAATTTTCTCATCAT+GGG - tig0027849:6121-6140 None:intergenic 20.0%
!! TGAAAATTGATCATTTAGAT+TGG + tig0027849:6988-7007 Msa1436040:intron 20.0%
!! ATATAAATATTATCCCTGTT+TGG - tig0027849:7256-7275 None:intergenic 20.0%
!! CTTATTAGATGAATAATGTA+TGG + tig0027849:8226-8245 Msa1436040:three_prime_UTR 20.0%
!!! ATCTTTTATTTGAATATGTG+TGG + tig0027849:8348-8367 Msa1436040:three_prime_UTR 20.0%
! AGTGGAAAATGAAAGTAAAA+AGG - tig0027849:646-665 None:intergenic 25.0%
!! CTTTCATTTTCCACTTTAAA+CGG + tig0027849:651-670 Msa1436040:intron 25.0%
!!! GTTTTGTTTGTCTTAATTGT+AGG + tig0027849:922-941 Msa1436040:intron 25.0%
!!! CGAATGAACATCTTTTAAAA+AGG - tig0027849:982-1001 None:intergenic 25.0%
!! TGATTGAAGTTGATCTATTA+AGG + tig0027849:1219-1238 Msa1436040:intron 25.0%
! GTGAATTTATAATATACAGG+TGG - tig0027849:1516-1535 None:intergenic 25.0%
! CAAAAAACAGGATTTCAAAA+GGG + tig0027849:1626-1645 Msa1436040:intron 25.0%
! AAAAAACAGGATTTCAAAAG+GGG + tig0027849:1627-1646 Msa1436040:intron 25.0%
!! TGTTTTGTACAGATTGAAAA+GGG - tig0027849:1726-1745 None:intergenic 25.0%
!!! TTGTTTTGTACAGATTGAAA+AGG - tig0027849:1727-1746 None:intergenic 25.0%
! TACATATTAATGATTGGCAT+TGG + tig0027849:2300-2319 Msa1436040:intron 25.0%
! ACATGATCTATTATTGAGTT+TGG + tig0027849:2356-2375 Msa1436040:intron 25.0%
!! ACTTTGATTACAAGATGTTT+TGG - tig0027849:2407-2426 None:intergenic 25.0%
!! ATTTTCAACAACAGATATAG+TGG - tig0027849:2718-2737 None:intergenic 25.0%
! GAAATCAAAATTCACTGAAA+GGG - tig0027849:2881-2900 None:intergenic 25.0%
! AGAAATCAAAATTCACTGAA+AGG - tig0027849:2882-2901 None:intergenic 25.0%
! TCAACTGCTTAAAAGAAATT+GGG - tig0027849:3156-3175 None:intergenic 25.0%
! ATCAACTGCTTAAAAGAAAT+TGG - tig0027849:3157-3176 None:intergenic 25.0%
! ATTGTAGATAATTTATCTCC+CGG + tig0027849:3632-3651 Msa1436040:CDS 25.0%
! TACAAGATATGCTGATATTT+AGG + tig0027849:3748-3767 Msa1436040:intron 25.0%
! ATACAAAATCTTATGTACCA+GGG - tig0027849:3789-3808 None:intergenic 25.0%
! TATTGAGAAGTTAAGATCAA+AGG + tig0027849:4360-4379 Msa1436040:intron 25.0%
! ATTGAGAAGTTAAGATCAAA+GGG + tig0027849:4361-4380 Msa1436040:intron 25.0%
! AATCAAACAAATCTTTGGTT+AGG - tig0027849:5614-5633 None:intergenic 25.0%
! ATGAATTGTCTCTTGTAAAT+AGG - tig0027849:5676-5695 None:intergenic 25.0%
!! TTTTTGCTTATAAATGTGAC+CGG - tig0027849:5873-5892 None:intergenic 25.0%
!!! CAATTTTTTAGGTACATTTC+TGG + tig0027849:5894-5913 Msa1436040:intron 25.0%
! ATTGTATATTTGAGAAGGTA+AGG + tig0027849:5929-5948 Msa1436040:intron 25.0%
!!! GACATTTAATTTTCTCATCA+TGG - tig0027849:6122-6141 None:intergenic 25.0%
! CTTATAATGATATAGATAGG+TGG - tig0027849:6164-6183 None:intergenic 25.0%
! ATGCTTACTCAATTGAAAAA+TGG - tig0027849:6434-6453 None:intergenic 25.0%
!!! TAGTATGTTGAGTTATTTCT+TGG + tig0027849:6504-6523 Msa1436040:intron 25.0%
! AATTTGAACTATGTACCTTA+AGG + tig0027849:6658-6677 Msa1436040:intron 25.0%
!!! AGTTTAGTTTTGTAACCTTA+AGG - tig0027849:6676-6695 None:intergenic 25.0%
!! AAATTCCTATTTCTTCATGA+AGG - tig0027849:6897-6916 None:intergenic 25.0%
!! TGATCAATTTTCAGACAAAA+AGG - tig0027849:6981-7000 None:intergenic 25.0%
!! TGCAAATTTTAAATTGTCCT+AGG + tig0027849:7292-7311 Msa1436040:intron 25.0%
! ATAAAATATAAGCCAACATC+AGG - tig0027849:7727-7746 None:intergenic 25.0%
! ATTCACAAAAACATTGAACA+CGG - tig0027849:7810-7829 None:intergenic 25.0%
!!! TATTGTTTTTATAAAGGGCA+TGG + tig0027849:7974-7993 Msa1436040:intron 25.0%
! AAGTTTAAGCATGGAAAATT+TGG + tig0027849:8091-8110 Msa1436040:CDS 25.0%
!! AAAGCCCTAAACTTTATTTA+GGG + tig0027849:8391-8410 Msa1436040:three_prime_UTR 25.0%
TCACGTCGATATTGTTAAAT+TGG - tig0027849:337-356 None:intergenic 30.0%
TTTAACAATATCGACGTGAA+TGG + tig0027849:338-357 Msa1436040:five_prime_UTR 30.0%
AGTCACAAGAAGAAGTTATA+TGG + tig0027849:367-386 Msa1436040:five_prime_UTR 30.0%
AGAGATTGAAAGAGAAGAAT+AGG - tig0027849:464-483 None:intergenic 30.0%
ATATTTCAGAATTTGGGTCA+TGG + tig0027849:743-762 Msa1436040:intron 30.0%
TGAATTGGTGTAGTAAAGAA+AGG - tig0027849:813-832 None:intergenic 30.0%
AGATGTTCATTCGTTGAAAT+TGG + tig0027849:989-1008 Msa1436040:intron 30.0%
! ATATGGAGACATCTGTATTT+TGG - tig0027849:1153-1172 None:intergenic 30.0%
!!! GTCAAGTTTTTTATTGACGT+GGG - tig0027849:1568-1587 None:intergenic 30.0%
!!! TGTCAAGTTTTTTATTGACG+TGG - tig0027849:1569-1588 None:intergenic 30.0%
!!! ACTTGACACATCACATTTTT+TGG + tig0027849:1581-1600 Msa1436040:intron 30.0%
!!! CCTTTTGAAATCCTGTTTTT+TGG - tig0027849:1628-1647 None:intergenic 30.0%
CCAAAAAACAGGATTTCAAA+AGG + tig0027849:1625-1644 Msa1436040:intron 30.0%
AAAAACAGGATTTCAAAAGG+GGG + tig0027849:1628-1647 Msa1436040:intron 30.0%
TTAGAACCTCTTAAAGAATG+CGG + tig0027849:1759-1778 Msa1436040:intron 30.0%
!!! TTAAAGAATGCGGTTTTGAA+AGG + tig0027849:1769-1788 Msa1436040:intron 30.0%
GACTTAATAGTAAGAACACT+GGG + tig0027849:1791-1810 Msa1436040:intron 30.0%
TCTGATTAGATATCTCTGTA+AGG - tig0027849:1969-1988 None:intergenic 30.0%
CGTACATAATGAAAGACAAA+AGG - tig0027849:2089-2108 None:intergenic 30.0%
TTTGTCTTTCATTATGTACG+AGG + tig0027849:2089-2108 Msa1436040:intron 30.0%
TTGTCTTTCATTATGTACGA+GGG + tig0027849:2090-2109 Msa1436040:intron 30.0%
! TTTGGCTCAATATATCAGAA+AGG - tig0027849:2389-2408 None:intergenic 30.0%
! TAGTAGACAATATTAGCTCT+TGG + tig0027849:2643-2662 Msa1436040:intron 30.0%
AATTAAGTGCGATGTTTATC+AGG - tig0027849:2692-2711 None:intergenic 30.0%
CTGTTGTTGAAAATAATGTC+AGG + tig0027849:2724-2743 Msa1436040:intron 30.0%
! ATCATTTGGGATTGGAAATA+CGG + tig0027849:2797-2816 Msa1436040:CDS 30.0%
TCTGCAATTAAGGGAAAAAA+GGG - tig0027849:3113-3132 None:intergenic 30.0%
CAAGAAATGTCTGCAATTAA+GGG - tig0027849:3122-3141 None:intergenic 30.0%
ACAAGAAATGTCTGCAATTA+AGG - tig0027849:3123-3142 None:intergenic 30.0%
CAACTGCTTAAAAGAAATTG+GGG - tig0027849:3155-3174 None:intergenic 30.0%
!! TAAAAGCACCAAAGAGAATT+TGG + tig0027849:3228-3247 Msa1436040:intron 30.0%
!! AAAAGCACCAAAGAGAATTT+GGG + tig0027849:3229-3248 Msa1436040:intron 30.0%
! GCTACATTGTTGTTACTTAA+AGG + tig0027849:3485-3504 Msa1436040:intron 30.0%
! TTTTTCTTTAAATGTGGGTC+TGG - tig0027849:3569-3588 None:intergenic 30.0%
TTCTGCATGCTCTAATATAT+AGG + tig0027849:3669-3688 Msa1436040:intron 30.0%
CATACAAAATCTTATGTACC+AGG - tig0027849:3790-3809 None:intergenic 30.0%
GGCATGAAATATCGTTAAAA+GGG - tig0027849:3939-3958 None:intergenic 30.0%
AGGCATGAAATATCGTTAAA+AGG - tig0027849:3940-3959 None:intergenic 30.0%
TCATAAACACGACCATAAAA+TGG - tig0027849:3989-4008 None:intergenic 30.0%
! GATTTGAAATTTGAAGTGTG+AGG - tig0027849:4269-4288 None:intergenic 30.0%
!! TTCATAAGAGCTTGCTAAAA+TGG + tig0027849:4433-4452 Msa1436040:intron 30.0%
AGTTAAAGTTATGACTGATC+AGG - tig0027849:4599-4618 None:intergenic 30.0%
!!! TCTTTTGCTGTTAATGCATA+GGG - tig0027849:4713-4732 None:intergenic 30.0%
!!! TTCTTTTGCTGTTAATGCAT+AGG - tig0027849:4714-4733 None:intergenic 30.0%
AAAACTTACACACAATTGTG+AGG - tig0027849:4975-4994 None:intergenic 30.0%
! CACAATTGTGTGTAAGTTTT+AGG + tig0027849:4975-4994 Msa1436040:intron 30.0%
!!! AATTGTGTGTAAGTTTTAGG+TGG + tig0027849:4978-4997 Msa1436040:intron 30.0%
TGAAATTCTGTAACCTATCT+AGG + tig0027849:5085-5104 Msa1436040:intron 30.0%
! TCTCTTAATTTTCCCATGAT+GGG + tig0027849:5128-5147 Msa1436040:intron 30.0%
!! ATTTGAGTTTTTCCCATCAT+GGG - tig0027849:5143-5162 None:intergenic 30.0%
!! TATTTGAGTTTTTCCCATCA+TGG - tig0027849:5144-5163 None:intergenic 30.0%
GATTAAAATATTGGATGGCT+TGG + tig0027849:5178-5197 Msa1436040:intron 30.0%
AACAAGACAAATGGTACAAA+AGG - tig0027849:5219-5238 None:intergenic 30.0%
GTCAACTTTCTCTTGTAAAT+AGG + tig0027849:5775-5794 Msa1436040:intron 30.0%
ATGCTTTCAATAAAACCCAA+AGG - tig0027849:6408-6427 None:intergenic 30.0%
ATCCAAAACCATACAATTTG+AGG - tig0027849:6717-6736 None:intergenic 30.0%
! TTCTTTTATCATGAGCCAAA+TGG - tig0027849:6757-6776 None:intergenic 30.0%
GCTCATGATAAAAGAAACAT+GGG + tig0027849:6761-6780 Msa1436040:intron 30.0%
TGGAGATGAAATCTCTTTAA+GGG + tig0027849:6835-6854 Msa1436040:intron 30.0%
TGTTTCCTTCATGAAGAAAT+AGG + tig0027849:6889-6908 Msa1436040:intron 30.0%
TACTACCATGTATGAGTAAA+TGG + tig0027849:6953-6972 Msa1436040:intron 30.0%
CTCAAATAAGTCGATCAAAT+AGG - tig0027849:7024-7043 None:intergenic 30.0%
! ACTATGTTGTTTATCCAAAC+AGG + tig0027849:7239-7258 Msa1436040:intron 30.0%
! CTATGTTGTTTATCCAAACA+GGG + tig0027849:7240-7259 Msa1436040:intron 30.0%
! TTTTATGATCTACCTGATGT+TGG + tig0027849:7712-7731 Msa1436040:intron 30.0%
!! ATTTTATGATAACGCACGAA+TGG + tig0027849:7740-7759 Msa1436040:intron 30.0%
!! GTGTTCAATGTTTTTGTGAA+TGG + tig0027849:7809-7828 Msa1436040:intron 30.0%
TAACCTATGCAAGAAACATT+AGG - tig0027849:7844-7863 None:intergenic 30.0%
ACCATAGAATGATGCTAATT+TGG + tig0027849:7921-7940 Msa1436040:intron 30.0%
CCATAGAATGATGCTAATTT+GGG + tig0027849:7922-7941 Msa1436040:intron 30.0%
TTTGGCAAACATGGAAAATT+CGG + tig0027849:8109-8128 Msa1436040:CDS 30.0%
GCAACATACTAAGTTTCAAT+TGG + tig0027849:8291-8310 Msa1436040:three_prime_UTR 30.0%
! GAAAGCCCTAAACTTTATTT+AGG + tig0027849:8390-8409 Msa1436040:three_prime_UTR 30.0%
ACAAGAAATGTCTGCAAATA+AGG - tig0027849:8430-8449 None:intergenic 30.0%
TAAAGGCTTAATACATACGC+AGG - tig0027849:288-307 None:intergenic 35.0%
!! TGAGAGTGTTAACATTAGTG+CGG - tig0027849:416-435 None:intergenic 35.0%
AGAGAAGAATAGGAAGAAAG+AGG - tig0027849:454-473 None:intergenic 35.0%
!! GTAATTGTGGCTTTTGTTGT+TGG - tig0027849:551-570 None:intergenic 35.0%
GAACATACAGAGAAAGAAGA+AGG - tig0027849:791-810 None:intergenic 35.0%
!! GTCGTGTTATGCTTTTAACT+TGG - tig0027849:1094-1113 None:intergenic 35.0%
GATCTATTAAGGAACCAAGA+CGG + tig0027849:1230-1249 Msa1436040:intron 35.0%
ATCTATTAAGGAACCAAGAC+GGG + tig0027849:1231-1250 Msa1436040:intron 35.0%
ATCAAATGAAAACCGCACAT+AGG + tig0027849:1256-1275 Msa1436040:intron 35.0%
!! TATGATTTCTAGCCTATGTG+CGG - tig0027849:1271-1290 None:intergenic 35.0%
GTGATTTCATCGTATTAGTG+TGG - tig0027849:1299-1318 None:intergenic 35.0%
AGAAATGAAACTGAGAGAGA+AGG + tig0027849:1444-1463 Msa1436040:intron 35.0%
! GTACAGATTGAAAAGGGTAT+AGG - tig0027849:1720-1739 None:intergenic 35.0%
TCAAAACCGCATTCTTTAAG+AGG - tig0027849:1768-1787 None:intergenic 35.0%
GGACTTAATAGTAAGAACAC+TGG + tig0027849:1790-1809 Msa1436040:intron 35.0%
GATGAACCAAATACAGAAAC+CGG + tig0027849:2036-2055 Msa1436040:intron 35.0%
TGTCTTTCATTATGTACGAG+GGG + tig0027849:2091-2110 Msa1436040:intron 35.0%
!! ATTAATGATTGGCATTGGCT+TGG + tig0027849:2305-2324 Msa1436040:intron 35.0%
! AACTCTTTTACCTCAACATC+AGG + tig0027849:2443-2462 Msa1436040:intron 35.0%
TTGAAAATAATGTCAGGCAG+CGG + tig0027849:2730-2749 Msa1436040:intron 35.0%
ACCTAAAGCGAGAAATCATT+TGG + tig0027849:2783-2802 Msa1436040:CDS 35.0%
CCTAAAGCGAGAAATCATTT+GGG + tig0027849:2784-2803 Msa1436040:CDS 35.0%
CAAAATTCACTGAAAGGGAA+GGG - tig0027849:2876-2895 None:intergenic 35.0%
TCAAAATTCACTGAAAGGGA+AGG - tig0027849:2877-2896 None:intergenic 35.0%
CACTTTCAGCTTAGAATAGA+GGG + tig0027849:2915-2934 Msa1436040:intron 35.0%
TGAGTTATGGGTAAAAGATC+TGG + tig0027849:2995-3014 Msa1436040:CDS 35.0%
ACGGCAAAGTAAATGTATAC+AGG + tig0027849:3058-3077 Msa1436040:intron 35.0%
CGGCAAAGTAAATGTATACA+GGG + tig0027849:3059-3078 Msa1436040:intron 35.0%
GTCTGCAATTAAGGGAAAAA+AGG - tig0027849:3114-3133 None:intergenic 35.0%
!! CAGTTGATAGAATCATATCC+TGG + tig0027849:3169-3188 Msa1436040:CDS 35.0%
GAAATCGAAACTAACTGCAA+GGG - tig0027849:3196-3215 None:intergenic 35.0%
! CTTGCAGTTAGTTTCGATTT+CGG + tig0027849:3195-3214 Msa1436040:CDS 35.0%
AATGTAGCCAACAAGTGATT+TGG - tig0027849:3473-3492 None:intergenic 35.0%
! AAGAGTTTTGCAAAAGCCTT+TGG + tig0027849:3601-3620 Msa1436040:CDS 35.0%
TCAGCATATCTTGTACTAAG+TGG - tig0027849:3743-3762 None:intergenic 35.0%
!! GAGAGTCGTTTTCCATTTTA+TGG + tig0027849:3974-3993 Msa1436040:intron 35.0%
TTTATGGTCGTGTTTATGAC+AGG + tig0027849:3990-4009 Msa1436040:intron 35.0%
GATATATTGTGTGACAGTGA+AGG + tig0027849:4108-4127 Msa1436040:CDS 35.0%
AAGGAGTGAAAATCTATCGA+AGG + tig0027849:4190-4209 Msa1436040:CDS 35.0%
AGTTAAGATCAAAGGGTTCA+TGG + tig0027849:4368-4387 Msa1436040:intron 35.0%
TTGCTAAAATGGTTAGTGGA+GGG + tig0027849:4444-4463 Msa1436040:intron 35.0%
ATTTCTTCCTCTCACTCTAT+AGG + tig0027849:4669-4688 Msa1436040:intron 35.0%
CATTTAACCTATAGAGTGAG+AGG - tig0027849:4679-4698 None:intergenic 35.0%
AATTCTGTAACCTATCTAGG+TGG + tig0027849:5088-5107 Msa1436040:intron 35.0%
! GTCTCTTAATTTTCCCATGA+TGG + tig0027849:5127-5146 Msa1436040:intron 35.0%
TTTATTTACGGATCTGAACG+TGG + tig0027849:5309-5328 Msa1436040:intron 35.0%
ATCAATAATAGTACTCCCTC+CGG + tig0027849:5649-5668 Msa1436040:intron 35.0%
TTGTCTCTTGTAAATAGGAC+CGG - tig0027849:5671-5690 None:intergenic 35.0%
CTTTCTCTTGTAAATAGGAC+CGG + tig0027849:5780-5799 Msa1436040:intron 35.0%
TCTCAAAAAGATACTCTCTC+CGG + tig0027849:5851-5870 Msa1436040:intron 35.0%
GTATATTTGAGAAGGTAAGG+TGG + tig0027849:5932-5951 Msa1436040:intron 35.0%
AAAGGTGAACAAAGTGTGTA+CGG + tig0027849:5971-5990 Msa1436040:intron 35.0%
!!! GGTTCCGGTTGTTTTTAAAT+TGG - tig0027849:6069-6088 None:intergenic 35.0%
! ATTTTCTCATCATGGGAAAG+TGG - tig0027849:6114-6133 None:intergenic 35.0%
!! CACGTTATTTCTACGCAATA+TGG - tig0027849:6296-6315 None:intergenic 35.0%
! GTGAAGCATTAATTCTAGCA+AGG + tig0027849:6357-6376 Msa1436040:intron 35.0%
CTCAACATACTAGACTTTGT+TGG - tig0027849:6496-6515 None:intergenic 35.0%
! TCATTTTACAATCACCTTCG+AGG + tig0027849:6634-6653 Msa1436040:intron 35.0%
! CATTTTACAATCACCTTCGA+GGG + tig0027849:6635-6654 Msa1436040:intron 35.0%
! CACCTCAAATTGTATGGTTT+TGG + tig0027849:6712-6731 Msa1436040:intron 35.0%
TTATCATGAGCCAAATGGTA+GGG - tig0027849:6752-6771 None:intergenic 35.0%
TTTATCATGAGCCAAATGGT+AGG - tig0027849:6753-6772 None:intergenic 35.0%
GGCTCATGATAAAAGAAACA+TGG + tig0027849:6760-6779 Msa1436040:intron 35.0%
GTCAGGTAAAATATGTAGCA+GGG - tig0027849:6803-6822 None:intergenic 35.0%
AGTCAGGTAAAATATGTAGC+AGG - tig0027849:6804-6823 None:intergenic 35.0%
GTGGAGATGAAATCTCTTTA+AGG + tig0027849:6834-6853 Msa1436040:intron 35.0%
GGAGATGAAATCTCTTTAAG+GGG + tig0027849:6836-6855 Msa1436040:intron 35.0%
AGGAACCATTTACTCATACA+TGG - tig0027849:6961-6980 None:intergenic 35.0%
CAGCTTATGACATGTACATA+AGG + tig0027849:7098-7117 Msa1436040:intron 35.0%
AAGCTATCTTAGAGAGCTTA+TGG - tig0027849:7140-7159 None:intergenic 35.0%
GGTAGAAACAAGTATGATCA+AGG + tig0027849:7334-7353 Msa1436040:intron 35.0%
AGAAACAAGTATGATCAAGG+AGG + tig0027849:7337-7356 Msa1436040:intron 35.0%
! TTTGGTGGATATTGTTGTGA+AGG - tig0027849:7454-7473 None:intergenic 35.0%
TCTCCTAATGTTTCTTGCAT+AGG + tig0027849:7838-7857 Msa1436040:intron 35.0%
CCCAAATTAGCATCATTCTA+TGG - tig0027849:7925-7944 None:intergenic 35.0%
TAGAATGATGCTAATTTGGG+AGG + tig0027849:7925-7944 Msa1436040:intron 35.0%
AGAATGATGCTAATTTGGGA+GGG + tig0027849:7926-7945 Msa1436040:intron 35.0%
CATGGAAAATTTGGCAAACA+TGG + tig0027849:8100-8119 Msa1436040:CDS 35.0%
AAGCATGGAAAATTTGGCAA+GGG + tig0027849:8097-8116 Msa1436040:CDS 35.0%
CAGGCCCTAAATAAAGTTTA+GGG - tig0027849:8398-8417 None:intergenic 35.0%
ACAGGCCCTAAATAAAGTTT+AGG - tig0027849:8399-8418 None:intergenic 35.0%
! AACTTTATTTAGGGCCTGTT+TGG + tig0027849:8400-8419 Msa1436040:three_prime_UTR 35.0%
CAACTGCTTCAAAGAAATTG+TGG - tig0027849:8462-8481 None:intergenic 35.0%
!! CACAATTTCTTTGAAGCAGT+TGG + tig0027849:8460-8479 Msa1436040:three_prime_UTR 35.0%
TAGGAAGAAAGAGGTCGAAA+GGG - tig0027849:445-464 None:intergenic 40.0%
ATAGGAAGAAAGAGGTCGAA+AGG - tig0027849:446-465 None:intergenic 40.0%
TTCTTCTTTGTCCCAAGTAG+TGG + tig0027849:509-528 Msa1436040:five_prime_UTR 40.0%
AGTTGTGAGCTTCGTAATTG+TGG - tig0027849:564-583 None:intergenic 40.0%
!! AAGCTCACAACTTGTTGCAT+TGG + tig0027849:572-591 Msa1436040:five_prime_UTR 40.0%
CCAAGTTGTAAGAGAGATTG+AGG - tig0027849:608-627 None:intergenic 40.0%
CCTCAATCTCTCTTACAACT+TGG + tig0027849:605-624 Msa1436040:five_prime_UTR 40.0%
CTCAACCAATAGCAATGACT+AGG - tig0027849:1191-1210 None:intergenic 40.0%
TCTATTAAGGAACCAAGACG+GGG + tig0027849:1232-1251 Msa1436040:intron 40.0%
TTTCATTTGATTCCCCGTCT+TGG - tig0027849:1247-1266 None:intergenic 40.0%
AAAGATGCACAGAGTGATTC+CGG + tig0027849:1387-1406 Msa1436040:intron 40.0%
!!! AAGGGGTCGTTTTTTCTATC+CGG - tig0027849:1409-1428 None:intergenic 40.0%
TAGAAAAAACGACCCCTTTC+CGG + tig0027849:1411-1430 Msa1436040:intron 40.0%
TTCATTTCTTCGTCATCCAC+CGG - tig0027849:1433-1452 None:intergenic 40.0%
CAATAATCTGAGTGAGTGAG+TGG - tig0027849:1482-1501 None:intergenic 40.0%
CACTCACTCACTCAGATTAT+TGG + tig0027849:1480-1499 Msa1436040:intron 40.0%
CTCTGTAAGGTGACAAAAGA+TGG - tig0027849:1956-1975 None:intergenic 40.0%
TTAGGTCCGGTTTCTGTATT+TGG - tig0027849:2045-2064 None:intergenic 40.0%
ATACAGAAACCGGACCTAAT+AGG + tig0027849:2046-2065 Msa1436040:intron 40.0%
TGAAAGACAAAAGGATTCGC+TGG - tig0027849:2080-2099 None:intergenic 40.0%
TTGCCACTCATGGTAGATAT+TGG + tig0027849:2200-2219 Msa1436040:exon 40.0%
CATCCAATATCTACCATGAG+TGG - tig0027849:2206-2225 None:intergenic 40.0%
CTCATGGTAGATATTGGATG+TGG + tig0027849:2206-2225 Msa1436040:exon 40.0%
TTTACCTCAACATCAGGATG+TGG + tig0027849:2449-2468 Msa1436040:intron 40.0%
TTAACCACATCCTGATGTTG+AGG - tig0027849:2456-2475 None:intergenic 40.0%
CCCAAATGATTTCTCGCTTT+AGG - tig0027849:2787-2806 None:intergenic 40.0%
! AGCGAGAAATCATTTGGGAT+TGG + tig0027849:2789-2808 Msa1436040:CDS 40.0%
TGGAAATACGGCAAAAGGTA+AGG + tig0027849:2809-2828 Msa1436040:intron 40.0%
GCACTTTCAGCTTAGAATAG+AGG + tig0027849:2914-2933 Msa1436040:intron 40.0%
ACTTCAATTCCATGTGCAGA+TGG + tig0027849:2962-2981 Msa1436040:intron 40.0%
CGAAATCGAAACTAACTGCA+AGG - tig0027849:3197-3216 None:intergenic 40.0%
CATTCACGTATTCAGCACAT+CGG + tig0027849:3311-3330 Msa1436040:intron 40.0%
GGTAACCATTGGATTGAGAT+CGG + tig0027849:3332-3351 Msa1436040:intron 40.0%
ACTGTGTGGAATTATGAGTG+CGG + tig0027849:3442-3461 Msa1436040:intron 40.0%
GGGAAATCCAAATCACTTGT+TGG + tig0027849:3463-3482 Msa1436040:intron 40.0%
! GTTTTGCAAAAGCCTTTGGT+CGG + tig0027849:3605-3624 Msa1436040:CDS 40.0%
!! TCTACAATAGTACCGACCAA+AGG - tig0027849:3620-3639 None:intergenic 40.0%
GTAGATAATTTATCTCCCGG+AGG + tig0027849:3635-3654 Msa1436040:CDS 40.0%
AGAAAATATACCTGTCCTCC+GGG - tig0027849:3653-3672 None:intergenic 40.0%
CAGAAAATATACCTGTCCTC+CGG - tig0027849:3654-3673 None:intergenic 40.0%
ACAATCTGATGCACTTGAAG+TGG + tig0027849:4020-4039 Msa1436040:CDS 40.0%
GTGCATCAACTTCATCTAAC+TGG - tig0027849:4062-4081 None:intergenic 40.0%
TATTGTGTGACAGTGAAGGA+TGG + tig0027849:4112-4131 Msa1436040:CDS 40.0%
ATGGTTGTTAAGCAACCCTA+TGG + tig0027849:4131-4150 Msa1436040:CDS 40.0%
TGGTTGTTAAGCAACCCTAT+GGG + tig0027849:4132-4151 Msa1436040:CDS 40.0%
GAGATTCATGCTGAATTCGA+AGG + tig0027849:4171-4190 Msa1436040:CDS 40.0%
AAGGTTGTATGAGAAGAAGC+AGG + tig0027849:4209-4228 Msa1436040:CDS 40.0%
!! GAGCTTGCTAAAATGGTTAG+TGG + tig0027849:4440-4459 Msa1436040:intron 40.0%
CTTGCTAAAATGGTTAGTGG+AGG + tig0027849:4443-4462 Msa1436040:intron 40.0%
TGCTAAAATGGTTAGTGGAG+GGG + tig0027849:4445-4464 Msa1436040:intron 40.0%
ATGACTGATCAGGACAGAAA+TGG - tig0027849:4589-4608 None:intergenic 40.0%
ACCTATCTAGGTGGCATTTA+TGG + tig0027849:5097-5116 Msa1436040:intron 40.0%
ACCATAAATGCCACCTAGAT+AGG - tig0027849:5101-5120 None:intergenic 40.0%
TATCTAGGTGGCATTTATGG+TGG + tig0027849:5100-5119 Msa1436040:intron 40.0%
ATCTAGGTGGCATTTATGGT+GGG + tig0027849:5101-5120 Msa1436040:intron 40.0%
! GGATGGCTTGGATATAAGAT+TGG + tig0027849:5190-5209 Msa1436040:intron 40.0%
!!! GGAGAGAGTATCTTTTTGAG+AGG - tig0027849:5852-5871 None:intergenic 40.0%
! AAAGTGGATTTGACTGGCAA+TGG - tig0027849:6098-6117 None:intergenic 40.0%
! TAGATAGGTGGTGACGTTTA+AGG - tig0027849:6152-6171 None:intergenic 40.0%
TGACCAAAGTGTATGCTTGT+TGG - tig0027849:6385-6404 None:intergenic 40.0%
CATACACTTTGGTCACCTTT+GGG + tig0027849:6390-6409 Msa1436040:intron 40.0%
CATAGTTCAAATTCCCTCGA+AGG - tig0027849:6651-6670 None:intergenic 40.0%
AGCTAGCACCTCAAATTGTA+TGG + tig0027849:6706-6725 Msa1436040:intron 40.0%
TAAGTACTTGTGAGACTGTC+TGG + tig0027849:7060-7079 Msa1436040:intron 40.0%
AAGTACTTGTGAGACTGTCT+GGG + tig0027849:7061-7080 Msa1436040:intron 40.0%
AGTTCATCTTGATTCAGCCT+AGG - tig0027849:7312-7331 None:intergenic 40.0%
GGCTGAATCAAGATGAACTA+TGG + tig0027849:7313-7332 Msa1436040:intron 40.0%
TGAGATGGATATGCAGTTTG+TGG - tig0027849:7418-7437 None:intergenic 40.0%
ACAAACTGCATATCCATCTC+AGG + tig0027849:7417-7436 Msa1436040:intron 40.0%
CAAACTGCATATCCATCTCA+GGG + tig0027849:7418-7437 Msa1436040:intron 40.0%
CAACAATATCCACCAAATGC+AGG + tig0027849:7457-7476 Msa1436040:CDS 40.0%
TGATAAGATGGTTGCTGATG+AGG - tig0027849:7505-7524 None:intergenic 40.0%
! TGATAACGCACGAATGGTAA+TGG + tig0027849:7746-7765 Msa1436040:intron 40.0%
GAATGATGCTAATTTGGGAG+GGG + tig0027849:7927-7946 Msa1436040:intron 40.0%
!! TTTTATAAAGGGCATGGTGC+TGG + tig0027849:7980-7999 Msa1436040:intron 40.0%
GGTCATGGAAAGTTTAAGCA+TGG + tig0027849:8082-8101 Msa1436040:CDS 40.0%
TTCGGCAAGCATGGAAAATT+TGG + tig0027849:8127-8146 Msa1436040:CDS 40.0%
CAAGCATGGAAAATTTGGCA+AGG + tig0027849:8132-8151 Msa1436040:CDS 40.0%
ATGGAAAATTTGGCAAGGGA+TGG + tig0027849:8137-8156 Msa1436040:CDS 40.0%
GCAAATAAGGCAATCCAAAC+AGG - tig0027849:8417-8436 None:intergenic 40.0%
TTCTGCTACTGCCACTACTT+GGG - tig0027849:523-542 None:intergenic 45.0%
ATTTGGGTCATGGCAGAATC+AGG + tig0027849:753-772 Msa1436040:five_prime_UTR 45.0%
GACGACCTAGTCATTGCTAT+TGG + tig0027849:1183-1202 Msa1436040:intron 45.0%
TAATCTGAGTGAGTGAGTGG+AGG - tig0027849:1479-1498 None:intergenic 45.0%
TTGTTCGCGTGGAATCATCA+AGG - tig0027849:1538-1557 None:intergenic 45.0%
TGAGCGATGGACCAAAAAAC+AGG + tig0027849:1614-1633 Msa1436040:intron 45.0%
AACCGGACCTAATAGGCATT+TGG + tig0027849:2053-2072 Msa1436040:intron 45.0%
GACCAAATGCCTATTAGGTC+CGG - tig0027849:2058-2077 None:intergenic 45.0%
ATAGCTGCTCTTTGGCAACA+CGG - tig0027849:2486-2505 None:intergenic 45.0%
GGGATTGGAAATACGGCAAA+AGG + tig0027849:2804-2823 Msa1436040:CDS 45.0%
GGGAAGGGAGTTATCATCAA+GGG - tig0027849:2861-2880 None:intergenic 45.0%
AGGGAAGGGAGTTATCATCA+AGG - tig0027849:2862-2881 None:intergenic 45.0%
! ATGGGTAAAAGATCTGGCTC+TGG + tig0027849:3001-3020 Msa1436040:CDS 45.0%
AGTGGCACCCAAATTCTCTT+TGG - tig0027849:3239-3258 None:intergenic 45.0%
CCAATAAGCCATTAGGTCAG+TGG - tig0027849:3257-3276 None:intergenic 45.0%
CCACTGACCTAATGGCTTAT+TGG + tig0027849:3254-3273 Msa1436040:intron 45.0%
TGACCTAATGGCTTATTGGC+TGG + tig0027849:3258-3277 Msa1436040:intron 45.0%
AGTCCAGCCAATAAGCCATT+AGG - tig0027849:3264-3283 None:intergenic 45.0%
! AATGGCTTATTGGCTGGACT+TGG + tig0027849:3264-3283 Msa1436040:intron 45.0%
ATGCGTGGAATTGTGACTTC+AGG - tig0027849:3294-3313 None:intergenic 45.0%
TTCAGCACATCGGTAACCAT+TGG + tig0027849:3321-3340 Msa1436040:intron 45.0%
ATCGTCCGATCTCAATCCAA+TGG - tig0027849:3340-3359 None:intergenic 45.0%
GTCAACACATCAGTGGTTGT+TGG - tig0027849:3424-3443 None:intergenic 45.0%
CTGTGTGGAATTATGAGTGC+GGG + tig0027849:3443-3462 Msa1436040:intron 45.0%
TAATTTATCTCCCGGAGGAC+AGG + tig0027849:3640-3659 Msa1436040:CDS 45.0%
! GGACTCTATATTTCTGTCCC+TGG + tig0027849:3769-3788 Msa1436040:intron 45.0%
ACTCTCTTAAGTCTTCTCGC+AGG - tig0027849:3960-3979 None:intergenic 45.0%
GGTTGTTAAGCAACCCTATG+GGG + tig0027849:4133-4152 Msa1436040:CDS 45.0%
TAAGCAACCCTATGGGGATT+AGG + tig0027849:4139-4158 Msa1436040:CDS 45.0%
TCTCAGTCCTAATCCCCATA+GGG - tig0027849:4149-4168 None:intergenic 45.0%
GTTGCTCACGCTCATCAAAA+TGG + tig0027849:4932-4951 Msa1436040:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG - tig0027849:5784-5803 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG - tig0027849:5783-5802 None:intergenic 45.0%
TCTCTTGTAAATAGGACCGG+AGG + tig0027849:5783-5802 Msa1436040:intron 45.0%
CTCTTGTAAATAGGACCGGA+GGG + tig0027849:5784-5803 Msa1436040:intron 45.0%
GGGATATTACATACTCCCTC+CGG - tig0027849:5802-5821 None:intergenic 45.0%
AGAAGGTAAGGTGGACAGAT+GGG + tig0027849:5941-5960 Msa1436040:intron 45.0%
!! GGACAGATGGGTTAAGAGAA+AGG + tig0027849:5953-5972 Msa1436040:intron 45.0%
TTTGACTGGCAATGGACAGT+TGG - tig0027849:6090-6109 None:intergenic 45.0%
! CATGGGAAAGTGGATTTGAC+TGG - tig0027849:6104-6123 None:intergenic 45.0%
! TAGGTGGTGACGTTTAAGGT+GGG - tig0027849:6148-6167 None:intergenic 45.0%
! ATAGGTGGTGACGTTTAAGG+TGG - tig0027849:6149-6168 None:intergenic 45.0%
GCACCAACAAGCATACACTT+TGG + tig0027849:6379-6398 Msa1436040:intron 45.0%
GCATACACTTTGGTCACCTT+TGG + tig0027849:6389-6408 Msa1436040:intron 45.0%
! AATTTGAGGTGCTAGCTCAG+TGG - tig0027849:6703-6722 None:intergenic 45.0%
CAAATGGTAGGGAAGACTAG+TGG - tig0027849:6741-6760 None:intergenic 45.0%
!! CACTAGTCTTCCCTACCATT+TGG + tig0027849:6739-6758 Msa1436040:intron 45.0%
! TACCTGACTGATTCTGATCG+TGG + tig0027849:6815-6834 Msa1436040:intron 45.0%
TCCTATTCCTATCCACCTCA+AGG + tig0027849:7379-7398 Msa1436040:intron 45.0%
TCCTTGAGGTGGATAGGAAT+AGG - tig0027849:7383-7402 None:intergenic 45.0%
TATTCCTATCCACCTCAAGG+AGG + tig0027849:7382-7401 Msa1436040:intron 45.0%
GATGGATATGCAGTTTGTGG+TGG - tig0027849:7415-7434 None:intergenic 45.0%
GGATAATAACCTCCCTGAGA+TGG - tig0027849:7433-7452 None:intergenic 45.0%
CAATATCCACCAAATGCAGG+AGG + tig0027849:7460-7479 Msa1436040:CDS 45.0%
TGATGAGGATAACCAGAAGG+TGG - tig0027849:7490-7509 None:intergenic 45.0%
TGCTGATGAGGATAACCAGA+AGG - tig0027849:7493-7512 None:intergenic 45.0%
CCATGAGGTGCATGATAAGA+TGG - tig0027849:7517-7536 None:intergenic 45.0%
CCATCTTATCATGCACCTCA+TGG + tig0027849:7514-7533 Msa1436040:CDS 45.0%
GGATGATCAAGTGTACCTGA+AGG - tig0027849:7544-7563 None:intergenic 45.0%
GGTACTCCTTGTACTTGCTT+CGG + tig0027849:7612-7631 Msa1436040:intron 45.0%
AAGAAGCCGAAGCAAGTACA+AGG - tig0027849:7621-7640 None:intergenic 45.0%
ACACGGATCGCAAAAAGTAG+AGG - tig0027849:7793-7812 None:intergenic 45.0%
GGTATAGGAGGATTGTTTGC+AGG + tig0027849:8001-8020 Msa1436040:CDS 45.0%
ATAGGAGGATTGTTTGCAGG+AGG + tig0027849:8004-8023 Msa1436040:CDS 45.0%
TAGGAGGATTGTTTGCAGGA+GGG + tig0027849:8005-8024 Msa1436040:CDS 45.0%
GGACATGGAGGTTATCATCA+TGG + tig0027849:8061-8080 Msa1436040:CDS 45.0%
GGAGGTTATCATCATGGTCA+TGG + tig0027849:8067-8086 Msa1436040:CDS 45.0%
CATGGAAAATTCGGCAAGCA+TGG + tig0027849:8118-8137 Msa1436040:CDS 45.0%
!! ATTATAATATATAATCTTAT+TGG - tig0027849:4815-4834 None:intergenic 5.0%
!!! AATTTAAATAATATTTTGTT+TGG + tig0027849:6912-6931 Msa1436040:intron 5.0%
!!! TTTATTACTTTTTTTAAAAA+TGG - tig0027849:7667-7686 None:intergenic 5.0%
GTTCTGCTACTGCCACTACT+TGG - tig0027849:524-543 None:intergenic 50.0%
GGTCGTCAACGTTGCAGATA+TGG - tig0027849:1170-1189 None:intergenic 50.0%
AAAAAACGACCCCTTTCCGG+TGG + tig0027849:1414-1433 Msa1436040:intron 50.0%
TCTTCGTCATCCACCGGAAA+GGG - tig0027849:1427-1446 None:intergenic 50.0%
TTCTTCGTCATCCACCGGAA+AGG - tig0027849:1428-1447 None:intergenic 50.0%
! TGGGATCAAACTTGTTCGCG+TGG - tig0027849:1549-1568 None:intergenic 50.0%
TGGTCCAGAAATCTGAGCGA+TGG + tig0027849:1601-1620 Msa1436040:intron 50.0%
TGGTCCATCGCTCAGATTTC+TGG - tig0027849:1608-1627 None:intergenic 50.0%
CGCTGGACCAAATGCCTATT+AGG - tig0027849:2063-2082 None:intergenic 50.0%
TTCCAGTCTGGTACTTGTGC+AGG - tig0027849:2158-2177 None:intergenic 50.0%
ACAAGTACCAGACTGGAACC+AGG + tig0027849:2160-2179 Msa1436040:five_prime_UTR 50.0%
CTACCATGAGTGGCAATGCA+GGG - tig0027849:2196-2215 None:intergenic 50.0%
TCTACCATGAGTGGCAATGC+AGG - tig0027849:2197-2216 None:intergenic 50.0%
GCTACGCTATAGCTGCTCTT+TGG - tig0027849:2494-2513 None:intergenic 50.0%
AAATAATGTCAGGCAGCGGC+AGG + tig0027849:2734-2753 Msa1436040:intron 50.0%
TGGTCAAGCGTGCTGAGTTA+TGG + tig0027849:2982-3001 Msa1436040:CDS 50.0%
GGTCAAGCGTGCTGAGTTAT+GGG + tig0027849:2983-3002 Msa1436040:CDS 50.0%
GAAACTAACTGCAAGGGACC+AGG - tig0027849:3190-3209 None:intergenic 50.0%
!! TTTGGGTGCCACTGACCTAA+TGG + tig0027849:3246-3265 Msa1436040:intron 50.0%
GTGCTGAATACGTGAATGCG+TGG - tig0027849:3309-3328 None:intergenic 50.0%
CCACACAGTCAACACATCAG+TGG - tig0027849:3431-3450 None:intergenic 50.0%
!! CCACTGATGTGTTGACTGTG+TGG + tig0027849:3428-3447 Msa1436040:intron 50.0%
CTGGACACTGCATGTGTTGA+GGG - tig0027849:3550-3569 None:intergenic 50.0%
TCTGGACACTGCATGTGTTG+AGG - tig0027849:3551-3570 None:intergenic 50.0%
CTCTCAGTCCTAATCCCCAT+AGG - tig0027849:4150-4169 None:intergenic 50.0%
GAGAAGGTAAGGTGGACAGA+TGG + tig0027849:5940-5959 Msa1436040:intron 50.0%
GGTGAACAAAGTGTGTACGG+TGG + tig0027849:5974-5993 Msa1436040:intron 50.0%
! TGGCAATGGACAGTTGGTTC+CGG - tig0027849:6084-6103 None:intergenic 50.0%
CTCCACGATCAGAATCAGTC+AGG - tig0027849:6820-6839 None:intergenic 50.0%
TAGGAATAGGATCCAGCTGG+TGG - tig0027849:7370-7389 None:intergenic 50.0%
GGATAGGAATAGGATCCAGC+TGG - tig0027849:7373-7392 None:intergenic 50.0%
ATAGCCTCCTTGAGGTGGAT+AGG - tig0027849:7389-7408 None:intergenic 50.0%
GGATAATAGCCTCCTTGAGG+TGG - tig0027849:7394-7413 None:intergenic 50.0%
GGTGGATAATAGCCTCCTTG+AGG - tig0027849:7397-7416 None:intergenic 50.0%
ACTGCATATCCATCTCAGGG+AGG + tig0027849:7421-7440 Msa1436040:intron 50.0%
GGATATCCTCCTGCATTTGG+TGG - tig0027849:7469-7488 None:intergenic 50.0%
GGTGGATATCCTCCTGCATT+TGG - tig0027849:7472-7491 None:intergenic 50.0%
GTACCTGAAGGATAGCCATG+AGG - tig0027849:7532-7551 None:intergenic 50.0%
AGCGACTCGAGTACTCATCA+TGG + tig0027849:7591-7610 Msa1436040:intron 50.0%
!! AAAGGGCATGGTGCTGGTAT+AGG + tig0027849:7986-8005 Msa1436040:intron 50.0%
AGGAGGATTGTTTGCAGGAG+GGG + tig0027849:8006-8025 Msa1436040:CDS 50.0%
GGTTCTCACCATCTCTCACA+TGG + tig0027849:8040-8059 Msa1436040:CDS 50.0%
CACCATCTCTCACATGGACA+TGG + tig0027849:8046-8065 Msa1436040:CDS 50.0%
CTCCATGTCCATGTGAGAGA+TGG - tig0027849:8051-8070 None:intergenic 50.0%
CATCTCTCACATGGACATGG+AGG + tig0027849:8049-8068 Msa1436040:CDS 50.0%
AAGGGATGGAAGTGATGCAG+AGG + tig0027849:8151-8170 Msa1436040:exon 50.0%
CTTCGTCATCCACCGGAAAG+GGG - tig0027849:1426-1445 None:intergenic 55.0%
CTCCTGCACAAGTACCAGAC+TGG + tig0027849:2153-2172 Msa1436040:five_prime_UTR 55.0%
GCAAAGACCTGGTTCCAGTC+TGG - tig0027849:2170-2189 None:intergenic 55.0%
ATGCAGGGTCTGCAAAGACC+TGG - tig0027849:2181-2200 None:intergenic 55.0%
AGACCCTGCATTGCCACTCA+TGG + tig0027849:2190-2209 Msa1436040:exon 55.0%
GCAGCGGCAGGTTTCTTATG+TGG + tig0027849:2746-2765 Msa1436040:CDS 55.0%
CACGCTTGACCATCTGCACA+TGG - tig0027849:2974-2993 None:intergenic 55.0%
GCAGGAGGATATCCACCTTC+TGG + tig0027849:7475-7494 Msa1436040:CDS 55.0%
GCACCTCATGGCTATCCTTC+AGG + tig0027849:7526-7545 Msa1436040:CDS 55.0%
AGGATTGTTTGCAGGAGGGG+TGG + tig0027849:8009-8028 Msa1436040:CDS 55.0%
GGAGGCTATTGTCCACCAGC+TGG + tig0027849:7355-7374 Msa1436040:intron 60.0%
!! GGGCATGGTGCTGGTATAGG+AGG + tig0027849:7989-8008 Msa1436040:intron 60.0%
GCAGGAGGGGTGGCTGCATA+TGG + tig0027849:8019-8038 Msa1436040:CDS 65.0%
Chromosome Type Strat End Strand Name
tig0027849 gene 283 8486 283 ID=Msa1436040;Name=Msa1436040
tig0027849 mRNA 283 8486 283 ID=Msa1436040-mRNA-1;Parent=Msa1436040;Name=Msa1436040-mRNA-1;_AED=0.22;_eAED=0.22;_QI=452|0.88|0.8|1|1|1|10|321|278
tig0027849 exon 283 626 283 ID=Msa1436040-mRNA-1:exon:10046;Parent=Msa1436040-mRNA-1
tig0027849 exon 752 802 752 ID=Msa1436040-mRNA-1:exon:10047;Parent=Msa1436040-mRNA-1
tig0027849 exon 2152 2227 2152 ID=Msa1436040-mRNA-1:exon:10048;Parent=Msa1436040-mRNA-1
tig0027849 exon 2746 2825 2746 ID=Msa1436040-mRNA-1:exon:10049;Parent=Msa1436040-mRNA-1
tig0027849 exon 2981 3030 2981 ID=Msa1436040-mRNA-1:exon:10050;Parent=Msa1436040-mRNA-1
tig0027849 exon 3132 3216 3132 ID=Msa1436040-mRNA-1:exon:10051;Parent=Msa1436040-mRNA-1
tig0027849 exon 3563 3661 3563 ID=Msa1436040-mRNA-1:exon:10052;Parent=Msa1436040-mRNA-1
tig0027849 exon 4012 4230 4012 ID=Msa1436040-mRNA-1:exon:10053;Parent=Msa1436040-mRNA-1
tig0027849 exon 7439 7547 7439 ID=Msa1436040-mRNA-1:exon:10054;Parent=Msa1436040-mRNA-1
tig0027849 exon 7990 8486 7990 ID=Msa1436040-mRNA-1:exon:10055;Parent=Msa1436040-mRNA-1
tig0027849 five_prime_UTR 283 626 283 ID=Msa1436040-mRNA-1:five_prime_utr;Parent=Msa1436040-mRNA-1
tig0027849 five_prime_UTR 752 802 752 ID=Msa1436040-mRNA-1:five_prime_utr;Parent=Msa1436040-mRNA-1
tig0027849 five_prime_UTR 2152 2208 2152 ID=Msa1436040-mRNA-1:five_prime_utr;Parent=Msa1436040-mRNA-1
tig0027849 CDS 2209 2227 2209 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 CDS 2746 2825 2746 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 CDS 2981 3030 2981 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 CDS 3132 3216 3132 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 CDS 3563 3661 3563 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 CDS 4012 4230 4012 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 CDS 7439 7547 7439 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 CDS 7990 8165 7990 ID=Msa1436040-mRNA-1:cds;Parent=Msa1436040-mRNA-1
tig0027849 three_prime_UTR 8166 8486 8166 ID=Msa1436040-mRNA-1:three_prime_utr;Parent=Msa1436040-mRNA-1
Gene Sequence

>Msa1436040

ATGGTAGATATTGGATGTGGCAGCGGCAGGTTTCTTATGTGGCTTGCAAAAAGAACACCTAAAGCGAGAAATCATTTGGGATTGGAAATACGGCAAAAGATGGTCAAGCGTGCTGAGTTATGGGTAAAAGATCTGGCTCTGGATAACATACATTTCTTGTTTGCAAATGCCCCAATTTCTTTTAAGCAGTTGATAGAATCATATCCTGGTCCCTTGCAGTTAGTTTCGATTTCGTGTCCAGACCCACATTTAAAGAAAAAATATCATAAAAGAAGAGTTTTGCAAAAGCCTTTGGTCGGTACTATTGTAGATAATTTATCTCCCGGAGGACAGGTGTTTGTACAATCTGATGCACTTGAAGTGGCACTTGACATGAAAAACCAGTTAGATGAAGTTGATGCACTTAGTCACATAGATGCTTTGAACTCTGATATATTGTGTGACAGTGAAGGATGGTTGTTAAGCAACCCTATGGGGATTAGGACTGAGAGAGAGATTCATGCTGAATTCGAAGGAGTGAAAATCTATCGAAGGTTGTATGAGAAGAAGCAGGGAGGTTATTATCCTTCACAACAATATCCACCAAATGCAGGAGGATATCCACCTTCTGGTTATCCTCATCAGCAACCATCTTATCATGCACCTCATGGCTATCCTTCAGGGCATGGTGCTGGTATAGGAGGATTGTTTGCAGGAGGGGTGGCTGCATATGGTTCTCACCATCTCTCACATGGACATGGAGGTTATCATCATGGTCATGGAAAGTTTAAGCATGGAAAATTTGGCAAACATGGAAAATTCGGCAAGCATGGAAAATTTGGCAAGGGATGGAAGTGA

Protein sequence

>Msa1436040

MVDIGCGSGRFLMWLAKRTPKARNHLGLEIRQKMVKRAELWVKDLALDNIHFLFANAPISFKQLIESYPGPLQLVSISCPDPHLKKKYHKRRVLQKPLVGTIVDNLSPGGQVFVQSDALEVALDMKNQLDEVDALSHIDALNSDILCDSEGWLLSNPMGIRTEREIHAEFEGVKIYRRLYEKKQGGYYPSQQYPPNAGGYPPSGYPHQQPSYHAPHGYPSGHGAGIGGLFAGGVAAYGSHHLSHGHGGYHHGHGKFKHGKFGKHGKFGKHGKFGKGWK*