Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0980270 | XP_013451516.1 | 90.563 | 657 | 29 | 3 | 1 | 657 | 1 | 624 | 0.0 | 1117 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0980270 | sp|Q92994|TF3B_HUMAN | 29.199 | 637 | 304 | 17 | 9 | 595 | 7 | 546 | 1.61e-50 | 189 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0980270 | A0A072U701 | 90.563 | 657 | 29 | 3 | 1 | 657 | 1 | 624 | 0.0 | 1117 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0980270 | Msa1042780 | 0.816672 | 4.901727e-52 | -8.615850e-47 |
Msa0980270 | Msa1123830 | 0.830129 | 3.493249e-55 | -8.615850e-47 |
Msa0980270 | Msa1235460 | 0.800042 | 1.734766e-48 | -8.615850e-47 |
Msa0980270 | Msa1437860 | 0.856704 | 2.687157e-62 | -8.615850e-47 |
Msa0595170 | Msa0980270 | 0.807578 | 4.721104e-50 | -8.615850e-47 |
Msa0878240 | Msa0980270 | 0.872447 | 3.157742e-67 | -8.615850e-47 |
Msa0878260 | Msa0980270 | 0.885179 | 1.016124e-71 | -8.615850e-47 |
Msa0943990 | Msa0980270 | 0.972249 | 1.849089e-134 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0980270 | MtrunA17_Chr6g0460761 | 90.563 | 657 | 29 | 3 | 1 | 657 | 1 | 624 | 0.0 | 1117 |
Msa0980270 | MtrunA17_Chr7g0254131 | 48.265 | 663 | 247 | 15 | 1 | 655 | 1 | 575 | 0.0 | 537 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa0980270 | AT3G09360.1 | 41.748 | 618 | 273 | 13 | 1 | 612 | 1 | 537 | 6.54e-129 | 393 |
Msa0980270 | AT3G09360.3 | 41.748 | 618 | 273 | 13 | 1 | 612 | 1 | 537 | 6.54e-129 | 393 |
Msa0980270 | AT3G09360.2 | 41.845 | 607 | 266 | 13 | 1 | 601 | 1 | 526 | 3.82e-128 | 389 |
Msa0980270 | AT2G45100.3 | 38.704 | 602 | 243 | 13 | 1 | 597 | 1 | 481 | 1.17e-109 | 342 |
Msa0980270 | AT2G45100.2 | 38.704 | 602 | 243 | 13 | 1 | 597 | 1 | 481 | 1.17e-109 | 342 |
Msa0980270 | AT2G45100.1 | 38.704 | 602 | 243 | 13 | 1 | 597 | 1 | 481 | 1.17e-109 | 342 |
Msa0980270 | AT2G01280.3 | 37.585 | 588 | 250 | 15 | 1 | 581 | 1 | 478 | 1.81e-95 | 303 |
Msa0980270 | AT2G01280.1 | 37.229 | 599 | 257 | 16 | 1 | 592 | 1 | 487 | 1.97e-94 | 302 |
Msa0980270 | AT2G01280.2 | 37.525 | 493 | 224 | 11 | 1 | 486 | 1 | 416 | 1.28e-88 | 284 |
Msa0980270 | AT1G30455.1 | 56.757 | 74 | 31 | 1 | 158 | 230 | 1 | 74 | 1.96e-19 | 89.0 |
Find 153 sgRNAs with CRISPR-Local
Find 765 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGAATAAATGGACACAATTT+TGG | 0.128851 | 6_4:+18264603 | None:intergenic |
TGATTCCAAAGTTACCTTTC+TGG | 0.162782 | 6_4:+18267266 | None:intergenic |
CATTGTTTGAGGAACGTTTC+TGG | 0.170128 | 6_4:-18276715 | Msa0980270:CDS |
TCTCTTGCTGCACGCTCTTC+AGG | 0.178853 | 6_4:+18267324 | None:intergenic |
AAGAAGAAGGATTAGGGTTT+AGG | 0.202918 | 6_4:+18276859 | None:intergenic |
CCAAAGATTGTCAAAAGTTT+TGG | 0.250566 | 6_4:-18264678 | Msa0980270:three_prime_UTR |
ATTAATTAATTAACAATGTT+TGG | 0.256019 | 6_4:+18276776 | None:intergenic |
GGAACCAGTCAACGAATTTC+CGG | 0.273578 | 6_4:-18264899 | Msa0980270:CDS |
CTAAGTTCTCAAAGAATAAA+TGG | 0.274755 | 6_4:+18264591 | None:intergenic |
AGAAGAAGGATTAGGGTTTA+GGG | 0.280780 | 6_4:+18276860 | None:intergenic |
TCCTCTGAGCCTGAAAATAT+TGG | 0.290266 | 6_4:-18268982 | Msa0980270:intron |
CAGAGGAAAGTAACTCTATT+TGG | 0.297589 | 6_4:+18268998 | None:intergenic |
ACCCTTGTGTTCACACCTTA+GGG | 0.310541 | 6_4:+18269999 | None:intergenic |
ACTCAGCTCCAAAGTCAATT+TGG | 0.316806 | 6_4:-18265665 | Msa0980270:CDS |
TGAAACAAAGGAGGATGAAT+TGG | 0.333186 | 6_4:-18264920 | Msa0980270:CDS |
TTTCTGACATGAAACGTAAC+TGG | 0.333196 | 6_4:-18272529 | Msa0980270:CDS |
GGAGGAGGAGGAAGAGAAGG+GGG | 0.334988 | 6_4:-18270073 | Msa0980270:CDS |
TACCCTTGTGTTCACACCTT+AGG | 0.337667 | 6_4:+18269998 | None:intergenic |
CGTACTTTCTTGTTATTCTC+TGG | 0.340846 | 6_4:+18264946 | None:intergenic |
TGGTGGACTTGGTGGTGGTT+TGG | 0.342950 | 6_4:-18269820 | Msa0980270:CDS |
TGAACGAAGAAGAAGGATTA+GGG | 0.347981 | 6_4:+18276853 | None:intergenic |
ATGAACGAAGAAGAAGGATT+AGG | 0.356643 | 6_4:+18276852 | None:intergenic |
CTCTTGCTGCACGCTCTTCA+GGG | 0.364636 | 6_4:+18267325 | None:intergenic |
AACATTATAAATAACCAGTT+TGG | 0.369851 | 6_4:+18264531 | None:intergenic |
CCAATACCCCTCTTTGCACT+TGG | 0.372856 | 6_4:-18269967 | Msa0980270:CDS |
AGGAGGAGGAGGAAGAGAAG+GGG | 0.375149 | 6_4:-18270074 | Msa0980270:CDS |
CAGTTTATTCACGGCAGTTT+TGG | 0.376492 | 6_4:-18276913 | Msa0980270:five_prime_UTR |
CTTGTCTTTATCTTGCATTC+CGG | 0.377305 | 6_4:-18273706 | Msa0980270:intron |
ACTTCAGTAGAAAGAGCTTC+TGG | 0.377574 | 6_4:+18264754 | None:intergenic |
GCGTGCAGCAAGAGAACTTA+GGG | 0.387586 | 6_4:-18267316 | Msa0980270:CDS |
AAGGATTAGGGTTTAGGGTT+TGG | 0.388751 | 6_4:+18276865 | None:intergenic |
CACGTTACAAGAAGCAGATA+TGG | 0.391418 | 6_4:-18267632 | Msa0980270:CDS |
GGATAAATTATTCGATAAAC+CGG | 0.399515 | 6_4:-18265635 | Msa0980270:intron |
GTGTTGGTATTTAACCAAAC+TGG | 0.400193 | 6_4:-18264545 | Msa0980270:three_prime_UTR |
TTGACAATCTTTGGTTCCCC+TGG | 0.401829 | 6_4:+18264687 | None:intergenic |
CATTTGTTCAGTTCGCCATT+TGG | 0.403323 | 6_4:+18270138 | None:intergenic |
GATAAACTCTCTGGTGGACT+TGG | 0.408580 | 6_4:-18269831 | Msa0980270:CDS |
GAGGAGGAGGAGGAAGAGAA+GGG | 0.409246 | 6_4:-18270075 | Msa0980270:CDS |
TATATTGAGGTTCATCAAAC+AGG | 0.411757 | 6_4:-18264655 | Msa0980270:three_prime_UTR |
CAAAGTCAATTTGGATCGCT+TGG | 0.417192 | 6_4:-18265656 | Msa0980270:CDS |
CCAAGTGCAAAGAGGGGTAT+TGG | 0.427480 | 6_4:+18269967 | None:intergenic |
TCAGGTGTTGTGAGTATTGT+GGG | 0.431143 | 6_4:-18276261 | Msa0980270:intron |
AATTCTCAGGCAATTTGATA+AGG | 0.432792 | 6_4:-18274982 | Msa0980270:CDS |
TTCTCAGCACGCTGGAATGC+AGG | 0.436803 | 6_4:+18269792 | None:intergenic |
TTGCAGTTTGATAAACTCTC+TGG | 0.437221 | 6_4:-18269840 | Msa0980270:intron |
GATAAGGGCGGTTAATGAAA+TGG | 0.437680 | 6_4:-18274966 | Msa0980270:CDS |
TCTCTCTGATATTGATGATA+AGG | 0.438833 | 6_4:-18268783 | Msa0980270:CDS |
TCAACAAGCTTTCGAACAAT+CGG | 0.438892 | 6_4:+18272970 | None:intergenic |
CAAGCGATCCAAATTGACTT+TGG | 0.440288 | 6_4:+18265657 | None:intergenic |
TACATGGCTGCTCTTGCAAA+TGG | 0.441378 | 6_4:-18272362 | Msa0980270:CDS |
TGTTCCTGTACAAGAATTGA+AGG | 0.445249 | 6_4:+18267414 | None:intergenic |
ATTAGGGTTTAGGGTTTGGC+AGG | 0.446558 | 6_4:+18276869 | None:intergenic |
TCAGAAAGGCGCTGCTGGAC+AGG | 0.447183 | 6_4:-18276197 | Msa0980270:intron |
CACCTTTGACAGTTTATTCA+CGG | 0.447359 | 6_4:-18276922 | Msa0980270:five_prime_UTR |
TCAATGTTGCTTCACATACA+TGG | 0.447800 | 6_4:+18270911 | None:intergenic |
CTCTCTGGTGGACTTGGTGG+TGG | 0.455580 | 6_4:-18269825 | Msa0980270:CDS |
ATCATGCTCACCATCTTTAG+TGG | 0.455651 | 6_4:+18268859 | None:intergenic |
CACAGAGTCTTCCAGCTTGA+CGG | 0.459123 | 6_4:-18270863 | Msa0980270:intron |
CGAATATAATCAAACATGGT+TGG | 0.461457 | 6_4:-18264715 | Msa0980270:three_prime_UTR |
CAAACATGGTTGGCAGCACC+AGG | 0.462385 | 6_4:-18264705 | Msa0980270:three_prime_UTR |
TTGCATATTTGCAGGAAAAG+AGG | 0.464764 | 6_4:-18266038 | Msa0980270:intron |
TGAGTATTGTGGGAAGGTGT+TGG | 0.473121 | 6_4:-18276251 | Msa0980270:CDS |
CATTTCAGAGGAGGAGGAGG+AGG | 0.485943 | 6_4:-18270115 | Msa0980270:CDS |
AAGTTCAGATTTACGTCCCC+TGG | 0.486991 | 6_4:+18273739 | None:intergenic |
GCAGCGCCTTTCTGAAAAGT+TGG | 0.487389 | 6_4:+18276205 | None:intergenic |
TCATCAGATTCAAATTCAAT+CGG | 0.488802 | 6_4:-18276811 | Msa0980270:five_prime_UTR |
TGTACAGGAACAAGCTATCA+AGG | 0.491940 | 6_4:-18267403 | Msa0980270:CDS |
ATTCTCAGGCAATTTGATAA+GGG | 0.492380 | 6_4:-18274981 | Msa0980270:CDS |
TCAGCCGGAAATTCGTTGAC+TGG | 0.493352 | 6_4:+18264895 | None:intergenic |
CGTCCAATTAAAATACCAAA+TGG | 0.498390 | 6_4:-18270153 | Msa0980270:CDS |
CTCATACTCTATCAGCCGCT+TGG | 0.500084 | 6_4:+18270888 | None:intergenic |
AAACTCTCTGGTGGACTTGG+TGG | 0.500329 | 6_4:-18269828 | Msa0980270:CDS |
TTTGTATAGAGCAAATTCTC+AGG | 0.500732 | 6_4:-18274995 | Msa0980270:intron |
TCTACCTTCAATTCTTGTAC+AGG | 0.502220 | 6_4:-18267418 | Msa0980270:CDS |
AGCGTGCAGCAAGAGAACTT+AGG | 0.503042 | 6_4:-18267317 | Msa0980270:CDS |
GAGTATGTGGCCACTAAAGA+TGG | 0.513135 | 6_4:-18268869 | Msa0980270:CDS |
TGCATTCCAGCGTGCTGAGA+AGG | 0.514794 | 6_4:-18269790 | Msa0980270:CDS |
ATGCATTTCAGAGGAGGAGG+AGG | 0.515585 | 6_4:-18270118 | Msa0980270:CDS |
GTATGCTGCATATAGGTTGA+TGG | 0.520154 | 6_4:-18267678 | Msa0980270:intron |
GAGGAAACAACGAGCTGAAG+AGG | 0.520287 | 6_4:-18266019 | Msa0980270:CDS |
AGCTGAAGAGGAAAGAAGGT+TGG | 0.521935 | 6_4:-18266007 | Msa0980270:CDS |
ATGTAGCTTTGTTAAAGCAA+AGG | 0.522430 | 6_4:-18272586 | Msa0980270:intron |
CGAGAAACATACCGTCAAGC+TGG | 0.522996 | 6_4:+18270852 | None:intergenic |
GCTGAAGAGGAAAGAAGGTT+GGG | 0.523634 | 6_4:-18266006 | Msa0980270:CDS |
ATCAGGTGTTGTGAGTATTG+TGG | 0.524517 | 6_4:-18276262 | Msa0980270:intron |
ACGTTACAAGAAGCAGATAT+GGG | 0.526035 | 6_4:-18267631 | Msa0980270:CDS |
TTGTCATGCAGTTATGCGCT+TGG | 0.529171 | 6_4:-18273039 | Msa0980270:intron |
TGCATTGTGATCATTGTTTG+AGG | 0.536540 | 6_4:-18276726 | Msa0980270:CDS |
GCACAATCCAAGTGCAAAGA+GGG | 0.537501 | 6_4:+18269960 | None:intergenic |
ACAACATCTGATTTCGAGCA+TGG | 0.538309 | 6_4:+18272335 | None:intergenic |
CAAATGCATTTCAGAGGAGG+AGG | 0.538374 | 6_4:-18270121 | Msa0980270:CDS |
AAGCCGCTGCAGCAGCTGAA+AGG | 0.539825 | 6_4:-18267380 | Msa0980270:CDS |
AAGGTGTGAACACAAGGGTA+TGG | 0.541219 | 6_4:-18269995 | Msa0980270:CDS |
AATTACCACTCATTATGTGT+TGG | 0.541883 | 6_4:-18264561 | Msa0980270:three_prime_UTR |
AGAAATCTATGTCGCAACCT+TGG | 0.543317 | 6_4:-18273939 | Msa0980270:CDS |
GCATACATATCTTCATCAGC+CGG | 0.546898 | 6_4:+18264880 | None:intergenic |
CAACAAGCTTTCGAACAATC+GGG | 0.547040 | 6_4:+18272971 | None:intergenic |
TACTATAATCATCCATTCCA+AGG | 0.549617 | 6_4:+18273922 | None:intergenic |
GCCTCTACAGCAGATTGAGC+AGG | 0.553208 | 6_4:+18265982 | None:intergenic |
TCCTGCTCAATCTGCTGTAG+AGG | 0.553426 | 6_4:-18265983 | Msa0980270:CDS |
TGTAGTCCTTTGACGTGAGT+CGG | 0.553519 | 6_4:+18274943 | None:intergenic |
GTGTTTCCTCCTCGTTGTGA+AGG | 0.556004 | 6_4:+18267652 | None:intergenic |
CCTTGTGTTCACACCTTAGG+GGG | 0.556945 | 6_4:+18270001 | None:intergenic |
AACGAGCTGAAGAGGAAAGA+AGG | 0.557519 | 6_4:-18266011 | Msa0980270:CDS |
TGCCGTGAATAAACTGTCAA+AGG | 0.561159 | 6_4:+18276920 | None:intergenic |
TCTATGTCGCAACCTTGGAA+TGG | 0.561396 | 6_4:-18273934 | Msa0980270:CDS |
GCGTGCTGAGAAGGATAGAA+TGG | 0.568554 | 6_4:-18269781 | Msa0980270:CDS |
AGTGCAAAGAGGGGTATTGG+AGG | 0.568834 | 6_4:+18269970 | None:intergenic |
TTTGTTAAAGCAAAGGAATG+TGG | 0.574309 | 6_4:-18272579 | Msa0980270:CDS |
TTCTATCCTTCTCAGCACGC+TGG | 0.578001 | 6_4:+18269784 | None:intergenic |
CCCTTGTGTTCACACCTTAG+GGG | 0.578827 | 6_4:+18270000 | None:intergenic |
AATGGTAAAGTCACATTCTG+AGG | 0.583645 | 6_4:-18269763 | Msa0980270:CDS |
AAATGGCCGACTCACGTCAA+AGG | 0.586448 | 6_4:-18274949 | Msa0980270:CDS |
CGCACAATCCAAGTGCAAAG+AGG | 0.588967 | 6_4:+18269959 | None:intergenic |
CAGTTTGATAAACTCTCTGG+TGG | 0.589446 | 6_4:-18269837 | Msa0980270:CDS |
AGAATGATGAACGAAGAAGA+AGG | 0.590208 | 6_4:+18276846 | None:intergenic |
CATGAAACGTAACTGGATGC+AGG | 0.591647 | 6_4:-18272522 | Msa0980270:intron |
CTCTGATATTGATGATAAGG+AGG | 0.595070 | 6_4:-18268780 | Msa0980270:intron |
ACATATGACTACGAGGAAGC+CGG | 0.595992 | 6_4:-18264817 | Msa0980270:CDS |
TCTCCTTTCAGCTGCTGCAG+CGG | 0.596698 | 6_4:+18267377 | None:intergenic |
GGGAGCTGTTGCTGCAGATG+TGG | 0.605282 | 6_4:-18267295 | Msa0980270:CDS |
AACATGGTTGGCAGCACCAG+GGG | 0.609200 | 6_4:-18264703 | Msa0980270:three_prime_UTR |
CTCAGGCAATTTGATAAGGG+CGG | 0.609343 | 6_4:-18274978 | Msa0980270:CDS |
TCTTGCTGCACGCTCTTCAG+GGG | 0.610688 | 6_4:+18267326 | None:intergenic |
ATGCGGTGCTGCGTTATACA+TGG | 0.612532 | 6_4:-18272378 | Msa0980270:CDS |
GAAAGTACGATTTGAAACAA+AGG | 0.613182 | 6_4:-18264932 | Msa0980270:CDS |
AGATGTGGCAAAATCCAGAA+AGG | 0.627135 | 6_4:-18267280 | Msa0980270:intron |
GAACAAATGCATTTCAGAGG+AGG | 0.627717 | 6_4:-18270124 | Msa0980270:CDS |
CAGCCGAATGTTGAAAACAA+AGG | 0.633769 | 6_4:-18265956 | Msa0980270:intron |
GATTGATGAGTTGAATGCAA+TGG | 0.634801 | 6_4:-18270193 | Msa0980270:CDS |
AGCTGAAAGGAGAAGACTAG+AGG | 0.638220 | 6_4:-18267367 | Msa0980270:CDS |
GTGTTGTGAGTATTGTGGGA+AGG | 0.639437 | 6_4:-18276257 | Msa0980270:CDS |
TGAAAGGAGAAGACTAGAGG+AGG | 0.639922 | 6_4:-18267364 | Msa0980270:CDS |
AAATACCAACACATAATGAG+TGG | 0.645285 | 6_4:+18264556 | None:intergenic |
AAACATGGTTGGCAGCACCA+GGG | 0.650290 | 6_4:-18264704 | Msa0980270:three_prime_UTR |
GTGAAGCAACATTGACCAAG+CGG | 0.653912 | 6_4:-18270903 | Msa0980270:CDS |
CGTCAAAGGACTACAGAGAG+AGG | 0.654133 | 6_4:-18274935 | Msa0980270:intron |
TCAGCACGCTGGAATGCAGG+AGG | 0.655004 | 6_4:+18269795 | None:intergenic |
ACTGAACAAATGCATTTCAG+AGG | 0.657949 | 6_4:-18270127 | Msa0980270:CDS |
CGTGCAGCAAGAGAACTTAG+GGG | 0.663010 | 6_4:-18267315 | Msa0980270:CDS |
AGTACGATTTGAAACAAAGG+AGG | 0.665275 | 6_4:-18264929 | Msa0980270:CDS |
CACAATCCAAGTGCAAAGAG+GGG | 0.668048 | 6_4:+18269961 | None:intergenic |
AGGAAACCTAGCGGAGTATG+CGG | 0.668612 | 6_4:-18272395 | Msa0980270:CDS |
TCTGGAACTCGAATTGACGA+AGG | 0.682647 | 6_4:-18276697 | Msa0980270:CDS |
TTTGGCAGGAATTTATACAC+CGG | 0.685439 | 6_4:+18276883 | None:intergenic |
TCTTGTGTGGAAGTTCAATG+TGG | 0.685911 | 6_4:-18267453 | Msa0980270:CDS |
TAATAATCGAGAGTATCTTG+AGG | 0.689797 | 6_4:-18267604 | Msa0980270:intron |
TATGACTACGAGGAAGCCGG+TGG | 0.707167 | 6_4:-18264814 | Msa0980270:CDS |
CTATGAGACATATGACTACG+AGG | 0.726665 | 6_4:-18264824 | Msa0980270:CDS |
CCCCTAAGGTGTGAACACAA+GGG | 0.735543 | 6_4:-18270000 | Msa0980270:CDS |
TGGCTACCTTCACAACGAGG+AGG | 0.742156 | 6_4:-18267658 | Msa0980270:CDS |
TGATGGCTACCTTCACAACG+AGG | 0.743013 | 6_4:-18267661 | Msa0980270:CDS |
CAGACAGGGAGGAAACCTAG+CGG | 0.816754 | 6_4:-18272404 | Msa0980270:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTAATTAATTAACAATGTT+TGG | + | chr6_4:18264600-18264619 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTGTATGATTAT+TGG | - | chr6_4:18265074-18265093 | Msa0980270:intron | 10.0% |
!! | TTAAAACTAATTAAAATTGA+TGG | + | chr6_4:18265890-18265909 | None:intergenic | 10.0% |
!!! | TAAGTTATTTTTATATTTGT+AGG | - | chr6_4:18267690-18267709 | Msa0980270:intron | 10.0% |
!!! | TTTTTTAGTTTCTATATTTT+TGG | - | chr6_4:18268896-18268915 | Msa0980270:intron | 10.0% |
!!! | TTTTTAGTTTCTATATTTTT+GGG | - | chr6_4:18268897-18268916 | Msa0980270:intron | 10.0% |
!! | TTATTTCAAACTAAATTATT+TGG | + | chr6_4:18270591-18270610 | None:intergenic | 10.0% |
!!! | TTTTTTAAATTGTTAATTGA+TGG | + | chr6_4:18272290-18272309 | None:intergenic | 10.0% |
!! | ATAAAAATTAAAATTTCCTA+GGG | + | chr6_4:18273577-18273596 | None:intergenic | 10.0% |
!! | AATAAAAATTAAAATTTCCT+AGG | + | chr6_4:18273578-18273597 | None:intergenic | 10.0% |
!! | TTTCATATACATAATTAATT+GGG | + | chr6_4:18276302-18276321 | None:intergenic | 10.0% |
!!! | TTTTCATATACATAATTAAT+TGG | + | chr6_4:18276303-18276322 | None:intergenic | 10.0% |
!!! | TTTGTTTTTTTTATGAGTAT+TGG | - | chr6_4:18264744-18264763 | Msa0980270:three_prime_UTR | 15.0% |
!!! | TTTTTGTTTAATTATTGGAT+TGG | - | chr6_4:18264848-18264867 | Msa0980270:CDS | 15.0% |
!!! | TTTTGTTTTTGTTTGAATAT+TGG | - | chr6_4:18264929-18264948 | Msa0980270:CDS | 15.0% |
!!! | TTTTGTTAAATATAGGTTTT+AGG | - | chr6_4:18265730-18265749 | Msa0980270:intron | 15.0% |
!!! | TTTGTTAAATATAGGTTTTA+GGG | - | chr6_4:18265731-18265750 | Msa0980270:intron | 15.0% |
!!! | AATTCACAATTAGTTTTTAA+TGG | - | chr6_4:18266134-18266153 | Msa0980270:intron | 15.0% |
!!! | ATTAGAATTATTTTGTTTCA+AGG | - | chr6_4:18267158-18267177 | Msa0980270:intron | 15.0% |
!!! | AGTTGATACATAATATTTAA+TGG | - | chr6_4:18267359-18267378 | Msa0980270:CDS | 15.0% |
!! | CAAATATAAAAATAACTTAC+CGG | + | chr6_4:18267689-18267708 | None:intergenic | 15.0% |
!!! | CATTAATTCTATTTTTATCT+TGG | - | chr6_4:18268276-18268295 | Msa0980270:intron | 15.0% |
!! | AATTTGTAAATAAAAAGACT+GGG | + | chr6_4:18268430-18268449 | None:intergenic | 15.0% |
!! | AAATTTGTAAATAAAAAGAC+TGG | + | chr6_4:18268431-18268450 | None:intergenic | 15.0% |
!! | TTTAATATTAATTTCAGAAG+TGG | - | chr6_4:18268554-18268573 | Msa0980270:intron | 15.0% |
!!! | TAAATATTTTCTTTCAAGTA+AGG | - | chr6_4:18268742-18268761 | Msa0980270:intron | 15.0% |
!!! | GAATGATTTTCTTTTTATTA+TGG | - | chr6_4:18268923-18268942 | Msa0980270:intron | 15.0% |
!! | AATCAACAAAAATGAAAATT+AGG | + | chr6_4:18269749-18269768 | None:intergenic | 15.0% |
!!! | TATTTTCTTTATTAATGCAT+TGG | - | chr6_4:18269811-18269830 | Msa0980270:CDS | 15.0% |
!! | TTCCAAAAATAGAAATATAT+TGG | - | chr6_4:18270180-18270199 | Msa0980270:CDS | 15.0% |
!!! | TAAATCATTTTACGTTTAAT+GGG | + | chr6_4:18270939-18270958 | None:intergenic | 15.0% |
!!! | ATAAATCATTTTACGTTTAA+TGG | + | chr6_4:18270940-18270959 | None:intergenic | 15.0% |
!! | AAAATTTCATTAATATCACA+TGG | - | chr6_4:18271152-18271171 | Msa0980270:intron | 15.0% |
!!! | TTTTTATTTGTTTGTTCTTT+TGG | - | chr6_4:18272316-18272335 | Msa0980270:intron | 15.0% |
!! | ATTATTGTTACAAGTTATAA+TGG | - | chr6_4:18274627-18274646 | Msa0980270:intron | 15.0% |
!! | TCCTACAAATAAAAAATTTA+GGG | + | chr6_4:18275528-18275547 | None:intergenic | 15.0% |
!! | TTCCTACAAATAAAAAATTT+AGG | + | chr6_4:18275529-18275548 | None:intergenic | 15.0% |
!! | TTTAATTGATCGATAAAATT+GGG | - | chr6_4:18276040-18276059 | Msa0980270:intron | 15.0% |
!! | GTAATTATGTAATTTAGAAA+AGG | + | chr6_4:18276142-18276161 | None:intergenic | 15.0% |
!!! | TATTTATTTACTTGATAGTT+TGG | - | chr6_4:18276205-18276224 | Msa0980270:CDS | 15.0% |
!!! | TTGTGTTTTTGTTTGATTAT+TGG | - | chr6_4:18264797-18264816 | Msa0980270:exon | 20.0% |
!!! | TCTTTGAATTTTGTTTTTGT+TGG | - | chr6_4:18264921-18264940 | Msa0980270:CDS | 20.0% |
!!! | TTTTTGTATGATTATTGGAT+TGG | - | chr6_4:18265079-18265098 | Msa0980270:intron | 20.0% |
!! | ATTGTGAAATAGTTCAATTT+AGG | - | chr6_4:18265219-18265238 | Msa0980270:intron | 20.0% |
!! | TTGTGAAATAGTTCAATTTA+GGG | - | chr6_4:18265220-18265239 | Msa0980270:intron | 20.0% |
!!! | TGATTCTGTAAAGTTTATTT+TGG | - | chr6_4:18265390-18265409 | Msa0980270:intron | 20.0% |
!! | AACTTCAATCTTACAAATAA+TGG | + | chr6_4:18265799-18265818 | None:intergenic | 20.0% |
!! | TTACAAAATTTCATAGCAAA+AGG | + | chr6_4:18266111-18266130 | None:intergenic | 20.0% |
!! | ACAAATAAGGAAATTAAAAG+AGG | + | chr6_4:18266354-18266373 | None:intergenic | 20.0% |
!! | CTATACAAAACAAACAAATA+AGG | + | chr6_4:18266367-18266386 | None:intergenic | 20.0% |
!!! | TGATTTTCTCATATTATTAG+TGG | - | chr6_4:18266742-18266761 | Msa0980270:intron | 20.0% |
!! | TTAAAGTTTATATCGAGATA+AGG | - | chr6_4:18266863-18266882 | Msa0980270:intron | 20.0% |
!! | AAAGTATGTATACTAAAAGA+AGG | + | chr6_4:18267543-18267562 | None:intergenic | 20.0% |
!! | TTTAGTATACATACTTTCAT+TGG | - | chr6_4:18267546-18267565 | Msa0980270:intron | 20.0% |
!! | TTAGTATACATACTTTCATT+GGG | - | chr6_4:18267547-18267566 | Msa0980270:intron | 20.0% |
!!! | TGCTTCTTATTTTTTTGAAA+AGG | + | chr6_4:18267737-18267756 | None:intergenic | 20.0% |
!! | GTCAAACAAAAAAAACATTT+AGG | + | chr6_4:18267992-18268011 | None:intergenic | 20.0% |
!!! | CATTAAACAAATTTGGAATT+TGG | + | chr6_4:18268088-18268107 | None:intergenic | 20.0% |
!!! | CAAATTCCAAATTTGTTTAA+TGG | - | chr6_4:18268086-18268105 | Msa0980270:intron | 20.0% |
!! | AAAGTTCCATTAAACAAATT+TGG | + | chr6_4:18268095-18268114 | None:intergenic | 20.0% |
!! | CATTTGAAAAATCAATAAGA+AGG | + | chr6_4:18268231-18268250 | None:intergenic | 20.0% |
!!! | TTGATTTTTCAAATGCTATA+AGG | - | chr6_4:18268236-18268255 | Msa0980270:intron | 20.0% |
!! | AACACATTAAAAATTGTGTA+CGG | + | chr6_4:18269504-18269523 | None:intergenic | 20.0% |
!!! | ACGTTTTTTTTTTTTTACAC+AGG | + | chr6_4:18269532-18269551 | None:intergenic | 20.0% |
!!! | AATTTTGGTATTCTTAATGT+TGG | - | chr6_4:18269656-18269675 | Msa0980270:intron | 20.0% |
!!! | ATTTTGGTATTCTTAATGTT+GGG | - | chr6_4:18269657-18269676 | Msa0980270:intron | 20.0% |
!! | TAGGAATACTAATCATATTA+TGG | + | chr6_4:18269730-18269749 | None:intergenic | 20.0% |
!! | AAAACTAATAATTCCCAAAA+AGG | - | chr6_4:18270114-18270133 | Msa0980270:CDS | 20.0% |
!! | AAACTAATAATTCCCAAAAA+GGG | - | chr6_4:18270115-18270134 | Msa0980270:CDS | 20.0% |
!!! | TGCCAATATATTTCTATTTT+TGG | + | chr6_4:18270185-18270204 | None:intergenic | 20.0% |
!! | AAATATATGTAGTTATAGTG+TGG | + | chr6_4:18270294-18270313 | None:intergenic | 20.0% |
!! | TAGTAAAATATAGTATGACA+CGG | + | chr6_4:18270341-18270360 | None:intergenic | 20.0% |
!! | ATCATAAAACAAGCAATTAA+AGG | + | chr6_4:18270559-18270578 | None:intergenic | 20.0% |
!!! | TTTAATTGCTTGTTTTATGA+TGG | - | chr6_4:18270558-18270577 | Msa0980270:intron | 20.0% |
!! | GTAAATAAATTATTTATGGC+TGG | + | chr6_4:18270731-18270750 | None:intergenic | 20.0% |
!! | TACAAAAAATGATTGAGAAA+AGG | - | chr6_4:18270748-18270767 | Msa0980270:intron | 20.0% |
!! | ACAAAAAATGATTGAGAAAA+GGG | - | chr6_4:18270749-18270768 | Msa0980270:intron | 20.0% |
!!! | TTTTAAAAATAACTGCAGAA+TGG | + | chr6_4:18270830-18270849 | None:intergenic | 20.0% |
!!! | AAATCATTTTACGTTTAATG+GGG | + | chr6_4:18270938-18270957 | None:intergenic | 20.0% |
!! | ATTCAAACTTTGGATATTTA+GGG | + | chr6_4:18271019-18271038 | None:intergenic | 20.0% |
!! | TTATATTGCAAACAATTGAT+AGG | - | chr6_4:18272769-18272788 | Msa0980270:intron | 20.0% |
!! | TAAGAAATTAGATTATGCAT+TGG | - | chr6_4:18272859-18272878 | Msa0980270:intron | 20.0% |
!! | AAGAAATTAGATTATGCATT+GGG | - | chr6_4:18272860-18272879 | Msa0980270:intron | 20.0% |
!! | CGTATATATAAATAAATGGT+GGG | - | chr6_4:18273025-18273044 | Msa0980270:CDS | 20.0% |
!! | TCTAAACATCAAATATACAA+TGG | + | chr6_4:18273288-18273307 | None:intergenic | 20.0% |
!! | AAAACTGAAGATTTATGTAA+GGG | + | chr6_4:18273339-18273358 | None:intergenic | 20.0% |
!! | TAAAACTGAAGATTTATGTA+AGG | + | chr6_4:18273340-18273359 | None:intergenic | 20.0% |
!! | ATATGAACTTTGATATTATG+GGG | + | chr6_4:18274374-18274393 | None:intergenic | 20.0% |
!! | GATATGAACTTTGATATTAT+GGG | + | chr6_4:18274375-18274394 | None:intergenic | 20.0% |
!! | TGATATGAACTTTGATATTA+TGG | + | chr6_4:18274376-18274395 | None:intergenic | 20.0% |
!! | TGAGTTATATAATTAACACA+GGG | - | chr6_4:18274553-18274572 | Msa0980270:intron | 20.0% |
!! | TTAGTTGTATCATTTCTAAA+AGG | + | chr6_4:18274665-18274684 | None:intergenic | 20.0% |
!!! | AAATAAAAAATTTAGGGCTT+GGG | + | chr6_4:18275522-18275541 | None:intergenic | 20.0% |
!!! | AGTAAATATGATTTGTTCAT+TGG | - | chr6_4:18275610-18275629 | Msa0980270:intron | 20.0% |
!!! | GTAAATATGATTTGTTCATT+GGG | - | chr6_4:18275611-18275630 | Msa0980270:intron | 20.0% |
!!! | ATACATTTTCAGAAAATTCT+AGG | + | chr6_4:18275640-18275659 | None:intergenic | 20.0% |
!! | AGCAACAAAAAAAAAGATAA+GGG | + | chr6_4:18275773-18275792 | None:intergenic | 20.0% |
!! | AAGCAACAAAAAAAAAGATA+AGG | + | chr6_4:18275774-18275793 | None:intergenic | 20.0% |
!! | TCTATCAGTTATAAAAGAAA+AGG | + | chr6_4:18275883-18275902 | None:intergenic | 20.0% |
!! | GTTTAATTGATCGATAAAAT+TGG | - | chr6_4:18276039-18276058 | Msa0980270:intron | 20.0% |
!! | ATTACATATATTCACTCTTT+AGG | - | chr6_4:18276064-18276083 | Msa0980270:intron | 20.0% |
!! | TTACATATATTCACTCTTTA+GGG | - | chr6_4:18276065-18276084 | Msa0980270:intron | 20.0% |
!!! | TATTGATGGTTTTTAGTAAA+AGG | - | chr6_4:18276592-18276611 | Msa0980270:intron | 20.0% |
!!! | ATTGATGGTTTTTAGTAAAA+GGG | - | chr6_4:18276593-18276612 | Msa0980270:intron | 20.0% |
!!! | TTTTCGAATATAATCAAACA+TGG | - | chr6_4:18276654-18276673 | Msa0980270:intron | 20.0% |
!! | AACATTATAAATAACCAGTT+TGG | + | chr6_4:18276845-18276864 | None:intergenic | 20.0% |
!!! | AATGTTTTGTTTGACTTTTA+AGG | - | chr6_4:18276859-18276878 | Msa0980270:five_prime_UTR | 20.0% |
! | TCATCAGATTCAAATTCAAT+CGG | - | chr6_4:18264562-18264581 | Msa0980270:three_prime_UTR | 25.0% |
!! | TTGGATTGGATTATTGATAA+TGG | - | chr6_4:18264862-18264881 | Msa0980270:CDS | 25.0% |
! | TGTTGGATTATCATTGATAA+TGG | - | chr6_4:18265008-18265027 | Msa0980270:intron | 25.0% |
!! | ATGATTATTGGATTGGATTA+TGG | - | chr6_4:18265086-18265105 | Msa0980270:intron | 25.0% |
! | TCTAACTTGAAGATAGAAAT+TGG | + | chr6_4:18265521-18265540 | None:intergenic | 25.0% |
! | AAATTTCATAGCAAAAGGTA+TGG | + | chr6_4:18266106-18266125 | None:intergenic | 25.0% |
!!! | TTTAGAGGATTTTTCAATTG+TGG | - | chr6_4:18266222-18266241 | Msa0980270:intron | 25.0% |
! | TCATTCAATAGTTATGTACA+GGG | + | chr6_4:18266571-18266590 | None:intergenic | 25.0% |
! | TTCAGTGTAATTATAAGTGT+CGG | + | chr6_4:18266717-18266736 | None:intergenic | 25.0% |
! | AGTTGATTAAATATGTAGCA+TGG | + | chr6_4:18266820-18266839 | None:intergenic | 25.0% |
!! | TACTTTTATAGACGTTTTCA+CGG | + | chr6_4:18266991-18267010 | None:intergenic | 25.0% |
! | TCAATTTATATCCCTATGTT+TGG | + | chr6_4:18267111-18267130 | None:intergenic | 25.0% |
!!! | TCGTTCATTCATTTTTCATT+CGG | - | chr6_4:18267774-18267793 | Msa0980270:intron | 25.0% |
!!! | ATGTTTTTTTTGTTTGACGA+AGG | - | chr6_4:18267994-18268013 | Msa0980270:intron | 25.0% |
!!! | TGTTTTTTTTGTTTGACGAA+GGG | - | chr6_4:18267995-18268014 | Msa0980270:intron | 25.0% |
!! | CATTTAATGATAACGTCATA+AGG | + | chr6_4:18268122-18268141 | None:intergenic | 25.0% |
! | AAAATTATCTTTCTTCTTGC+AGG | - | chr6_4:18268188-18268207 | Msa0980270:intron | 25.0% |
! | AAATTATCTTTCTTCTTGCA+GGG | - | chr6_4:18268189-18268208 | Msa0980270:intron | 25.0% |
! | GAAAAATCAATAAGAAGGTA+TGG | + | chr6_4:18268226-18268245 | None:intergenic | 25.0% |
! | GAAACGAATATGACTTAAAA+TGG | + | chr6_4:18268468-18268487 | None:intergenic | 25.0% |
! | TTATACCAATCATATTTCAG+TGG | + | chr6_4:18268496-18268515 | None:intergenic | 25.0% |
!! | TAGCATATAAAAGTATATGC+AGG | + | chr6_4:18268629-18268648 | None:intergenic | 25.0% |
!! | TATACTTTTATATGCTAGCA+TGG | - | chr6_4:18268632-18268651 | Msa0980270:intron | 25.0% |
! | AAATCAGATGTTGTAAGTTA+AGG | - | chr6_4:18269047-18269066 | Msa0980270:intron | 25.0% |
! | GTTGTTATACATCAATAAAG+AGG | - | chr6_4:18269141-18269160 | Msa0980270:intron | 25.0% |
!!! | AACAACTTCACGTTTTAAAT+AGG | - | chr6_4:18269321-18269340 | Msa0980270:intron | 25.0% |
! | ACACATTAAAAATTGTGTAC+GGG | + | chr6_4:18269503-18269522 | None:intergenic | 25.0% |
!!! | ATTTTTGTTGATTCTTCGAA+TGG | - | chr6_4:18269756-18269775 | Msa0980270:CDS | 25.0% |
!!! | TTTTTGTTGATTCTTCGAAT+GGG | - | chr6_4:18269757-18269776 | Msa0980270:CDS | 25.0% |
! | AAAATAACTACAGAGAAATG+GGG | + | chr6_4:18269797-18269816 | None:intergenic | 25.0% |
! | GAAAATAACTACAGAGAAAT+GGG | + | chr6_4:18269798-18269817 | None:intergenic | 25.0% |
! | AGAAAATAACTACAGAGAAA+TGG | + | chr6_4:18269799-18269818 | None:intergenic | 25.0% |
! | CCATTAGTGTTCTTTAATAA+CGG | - | chr6_4:18269939-18269958 | Msa0980270:intron | 25.0% |
! | GTTAGTATAAATTGGAATAG+CGG | + | chr6_4:18270053-18270072 | None:intergenic | 25.0% |
! | TTCAGCTAGTTAGTATAAAT+TGG | + | chr6_4:18270061-18270080 | None:intergenic | 25.0% |
! | ATCTAATACCATGTTGAAAA+AGG | - | chr6_4:18270245-18270264 | Msa0980270:intron | 25.0% |
! | AAGCAATTAAAGGAATAACA+AGG | + | chr6_4:18270549-18270568 | None:intergenic | 25.0% |
! | TCTAATGAGAACTCATAATA+TGG | + | chr6_4:18270880-18270899 | None:intergenic | 25.0% |
! | GATTCAAACTTTGGATATTT+AGG | + | chr6_4:18271020-18271039 | None:intergenic | 25.0% |
! | GTTTACAAAGATTCAAACTT+TGG | + | chr6_4:18271029-18271048 | None:intergenic | 25.0% |
!!! | CATTTGGTATTTTAATTGGA+CGG | + | chr6_4:18271222-18271241 | None:intergenic | 25.0% |
! | GTTTATCAAACTGCAATAAT+CGG | + | chr6_4:18271529-18271548 | None:intergenic | 25.0% |
!! | ACTTTTGTAAGCATTACAAA+AGG | - | chr6_4:18271691-18271710 | Msa0980270:intron | 25.0% |
! | TTATTAGTACTTGAAAAGCT+AGG | + | chr6_4:18271755-18271774 | None:intergenic | 25.0% |
! | CAAGTACTAATAAGATTTGT+AGG | - | chr6_4:18271762-18271781 | Msa0980270:intron | 25.0% |
! | ACAATAAATGTCACATTCTT+TGG | - | chr6_4:18271858-18271877 | Msa0980270:intron | 25.0% |
!!! | TCTTTTATTTCTCTTAACGA+TGG | - | chr6_4:18272419-18272438 | Msa0980270:intron | 25.0% |
! | AAACTAGATTTACAAACTGT+AGG | + | chr6_4:18272462-18272481 | None:intergenic | 25.0% |
!!! | ATCATTGACTATTTTTTTCC+AGG | - | chr6_4:18272674-18272693 | Msa0980270:intron | 25.0% |
! | AACAATGCTAAAAAAAATCC+TGG | + | chr6_4:18272695-18272714 | None:intergenic | 25.0% |
! | TGATAAGAGTTTATAAAGAG+AGG | + | chr6_4:18272928-18272947 | None:intergenic | 25.0% |
! | GGTGCGTATATATAAATAAA+TGG | - | chr6_4:18273021-18273040 | Msa0980270:CDS | 25.0% |
! | GCGTATATATAAATAAATGG+TGG | - | chr6_4:18273024-18273043 | Msa0980270:CDS | 25.0% |
!! | ATATATAAATAAATGGTGGG+TGG | - | chr6_4:18273028-18273047 | Msa0980270:CDS | 25.0% |
! | TTATGATGTGTAAATAGTTC+CGG | - | chr6_4:18273121-18273140 | Msa0980270:intron | 25.0% |
! | TATGATAATTATCAGATTCC+CGG | + | chr6_4:18273143-18273162 | None:intergenic | 25.0% |
! | AATGAAAAACAAAGAGTGAA+AGG | + | chr6_4:18273227-18273246 | None:intergenic | 25.0% |
!!! | TCACTCTTTGTTTTTCATTA+AGG | - | chr6_4:18273228-18273247 | Msa0980270:intron | 25.0% |
!!! | TCTTTGTTTTTCATTAAGGT+GGG | - | chr6_4:18273232-18273251 | Msa0980270:intron | 25.0% |
!!! | ACATAAATCTTCAGTTTTAG+TGG | - | chr6_4:18273341-18273360 | Msa0980270:intron | 25.0% |
!! | AAAAATAACCCATGCTTTTA+TGG | - | chr6_4:18273406-18273425 | Msa0980270:intron | 25.0% |
!!! | TCCTTTTTTGTTGATATTAG+AGG | - | chr6_4:18273807-18273826 | Msa0980270:intron | 25.0% |
! | ACCTCTAATATCAACAAAAA+AGG | + | chr6_4:18273811-18273830 | None:intergenic | 25.0% |
! | TTGGATGTAGAAAAATAAAC+AGG | + | chr6_4:18273841-18273860 | None:intergenic | 25.0% |
!! | ATTTCAGATTTTATCTTGTG+TGG | - | chr6_4:18273907-18273926 | Msa0980270:CDS | 25.0% |
!!! | GTAACTTTGGAATCATTTTT+CGG | - | chr6_4:18274115-18274134 | Msa0980270:intron | 25.0% |
!!! | TAACTTTGGAATCATTTTTC+GGG | - | chr6_4:18274116-18274135 | Msa0980270:intron | 25.0% |
! | ATAAGAATATGCAAACACAT+GGG | - | chr6_4:18274263-18274282 | Msa0980270:intron | 25.0% |
! | TTAAATATACTACTCGATGT+GGG | - | chr6_4:18274339-18274358 | Msa0980270:intron | 25.0% |
! | CTGAGTTATATAATTAACAC+AGG | - | chr6_4:18274552-18274571 | Msa0980270:intron | 25.0% |
! | GAGTTATATAATTAACACAG+GGG | - | chr6_4:18274554-18274573 | Msa0980270:intron | 25.0% |
!!! | TTACAAGTTATAATGGATGA+AGG | - | chr6_4:18274634-18274653 | Msa0980270:intron | 25.0% |
! | TTAAAGTTCTTGGAAAATGT+TGG | + | chr6_4:18274988-18275007 | None:intergenic | 25.0% |
!! | GACTAATATTCACCATATTT+TGG | - | chr6_4:18275122-18275141 | Msa0980270:intron | 25.0% |
! | TGATAGGAATAAGATCATAT+AGG | + | chr6_4:18275160-18275179 | None:intergenic | 25.0% |
! | TATGATCTTATTCCTATCAA+TGG | - | chr6_4:18275161-18275180 | Msa0980270:intron | 25.0% |
!!! | ATACCTTTGTTTTCAACATT+CGG | + | chr6_4:18275423-18275442 | None:intergenic | 25.0% |
!! | CAAATAAAAAATTTAGGGCT+TGG | + | chr6_4:18275523-18275542 | None:intergenic | 25.0% |
!!! | GCCCTAAATTTTTTATTTGT+AGG | - | chr6_4:18275524-18275543 | Msa0980270:intron | 25.0% |
! | TCATATTTACTGCTCAAATT+TGG | + | chr6_4:18275601-18275620 | None:intergenic | 25.0% |
! | GGATAAATTATTCGATAAAC+CGG | - | chr6_4:18275738-18275757 | Msa0980270:intron | 25.0% |
! | TACATATATTCACTCTTTAG+GGG | - | chr6_4:18276066-18276085 | Msa0980270:intron | 25.0% |
! | ACTAATGAAAAGTCTATGTT+GGG | - | chr6_4:18276104-18276123 | Msa0980270:intron | 25.0% |
!!! | AAATGGTATTTTAGACACAA+CGG | + | chr6_4:18276263-18276282 | None:intergenic | 25.0% |
! | TTAATTGGGTCATGTATATA+CGG | + | chr6_4:18276288-18276307 | None:intergenic | 25.0% |
! | TTCAAATGCTTCTTATAAAC+AGG | - | chr6_4:18276399-18276418 | Msa0980270:intron | 25.0% |
!!! | TCAAAAGTTTTGGTATATTG+AGG | - | chr6_4:18276705-18276724 | Msa0980270:CDS | 25.0% |
!! | AGAATAAATGGACACAATTT+TGG | + | chr6_4:18276773-18276792 | None:intergenic | 25.0% |
! | CTAAGTTCTCAAAGAATAAA+TGG | + | chr6_4:18276785-18276804 | None:intergenic | 25.0% |
!!! | AGGTAATGGAATTAAGGTTT+TGG | - | chr6_4:18265196-18265215 | Msa0980270:intron | 30.0% |
GTTTCGATATATGATAACCA+TGG | - | chr6_4:18265247-18265266 | Msa0980270:intron | 30.0% | |
TTGTAATCTCTATCATTCCA+TGG | + | chr6_4:18265267-18265286 | None:intergenic | 30.0% | |
!!! | GAGATTTTTGTCTTGTTTTG+CGG | - | chr6_4:18265342-18265361 | Msa0980270:intron | 30.0% |
!! | TTTGGCTAAAATTGAGTTGA+AGG | - | chr6_4:18265408-18265427 | Msa0980270:intron | 30.0% |
!! | AAATTGGAGCTTTTGATTCT+AGG | + | chr6_4:18265505-18265524 | None:intergenic | 30.0% |
GAATTGTTATGATGTGTTGA+CGG | - | chr6_4:18265641-18265660 | Msa0980270:CDS | 30.0% | |
!!! | ATAGGTTTTAGGGACTATTT+TGG | - | chr6_4:18265741-18265760 | Msa0980270:intron | 30.0% |
AGATTGAAGTTCAGATAGAA+TGG | - | chr6_4:18265808-18265827 | Msa0980270:intron | 30.0% | |
! | TAAACTCAAAGGTATAGAGT+GGG | + | chr6_4:18265856-18265875 | None:intergenic | 30.0% |
! | TTAAACTCAAAGGTATAGAG+TGG | + | chr6_4:18265857-18265876 | None:intergenic | 30.0% |
! | ACTCTATACCTTTGAGTTTA+AGG | - | chr6_4:18265856-18265875 | Msa0980270:intron | 30.0% |
! | CTCTATACCTTTGAGTTTAA+GGG | - | chr6_4:18265857-18265876 | Msa0980270:intron | 30.0% |
! | TCTATACCTTTGAGTTTAAG+GGG | - | chr6_4:18265858-18265877 | Msa0980270:intron | 30.0% |
TCAAAATACATTTGCAAGAG+TGG | - | chr6_4:18265963-18265982 | Msa0980270:CDS | 30.0% | |
CAAAATACATTTGCAAGAGT+GGG | - | chr6_4:18265964-18265983 | Msa0980270:CDS | 30.0% | |
! | ATTTTACACTGACATCCAAA+GGG | + | chr6_4:18266013-18266032 | None:intergenic | 30.0% |
! | AATTTTACACTGACATCCAA+AGG | + | chr6_4:18266014-18266033 | None:intergenic | 30.0% |
! | CATGTCTTTTAAACTTGAGA+CGG | - | chr6_4:18266047-18266066 | Msa0980270:intron | 30.0% |
! | TTTTCAATTGTGGAGTCTTA+AGG | - | chr6_4:18266232-18266251 | Msa0980270:intron | 30.0% |
TTTGTATAGAGCAAATTCTC+AGG | - | chr6_4:18266378-18266397 | Msa0980270:intron | 30.0% | |
AATTCTCAGGCAATTTGATA+AGG | - | chr6_4:18266391-18266410 | Msa0980270:intron | 30.0% | |
ATTCTCAGGCAATTTGATAA+GGG | - | chr6_4:18266392-18266411 | Msa0980270:intron | 30.0% | |
CTCATTCAATAGTTATGTAC+AGG | + | chr6_4:18266572-18266591 | None:intergenic | 30.0% | |
TCTCATATTATTAGTGGTGT+CGG | - | chr6_4:18266748-18266767 | Msa0980270:intron | 30.0% | |
TACTATAATCATCCATTCCA+AGG | + | chr6_4:18267454-18267473 | None:intergenic | 30.0% | |
TATGTATACTAAAAGAAGGC+AGG | + | chr6_4:18267539-18267558 | None:intergenic | 30.0% | |
ACTAGAGAAAAACTTTACCA+GGG | - | chr6_4:18267617-18267636 | Msa0980270:CDS | 30.0% | |
!! | TTCATTCATTTTTCATTCGG+TGG | - | chr6_4:18267777-18267796 | Msa0980270:intron | 30.0% |
AAAAAATCCAGTTTAGTGCA+CGG | + | chr6_4:18267818-18267837 | None:intergenic | 30.0% | |
! | AAACACAATTTTTGTGACTG+TGG | - | chr6_4:18268053-18268072 | Msa0980270:intron | 30.0% |
! | AACACAATTTTTGTGACTGT+GGG | - | chr6_4:18268054-18268073 | Msa0980270:intron | 30.0% |
ACATACCACTGAAATATGAT+TGG | - | chr6_4:18268488-18268507 | Msa0980270:intron | 30.0% | |
ATAGACTATCCTATACCTAA+TGG | - | chr6_4:18268603-18268622 | Msa0980270:intron | 30.0% | |
!! | ATGTAGCTTTGTTAAAGCAA+AGG | - | chr6_4:18268787-18268806 | Msa0980270:CDS | 30.0% |
TTTGTTAAAGCAAAGGAATG+TGG | - | chr6_4:18268794-18268813 | Msa0980270:CDS | 30.0% | |
! | ACAAATCAAGCATTTTCTCT+TGG | + | chr6_4:18269123-18269142 | None:intergenic | 30.0% |
! | TTTTCCTCCTAAGCTTATTA+TGG | - | chr6_4:18269551-18269570 | Msa0980270:intron | 30.0% |
ATCCTTTCCATAATAAGCTT+AGG | + | chr6_4:18269561-18269580 | None:intergenic | 30.0% | |
TATGGAAAGGATCTTGATTA+TGG | - | chr6_4:18269569-18269588 | Msa0980270:intron | 30.0% | |
! | TCTTGATTATGGTTTGTCTT+TGG | - | chr6_4:18269580-18269599 | Msa0980270:intron | 30.0% |
TTCTTAATGTTGGGATTCAT+TGG | - | chr6_4:18269666-18269685 | Msa0980270:intron | 30.0% | |
!! | ATACCCTCCATGTTTTTATT+AGG | - | chr6_4:18269693-18269712 | Msa0980270:intron | 30.0% |
!! | TACCCTCCATGTTTTTATTA+GGG | - | chr6_4:18269694-18269713 | Msa0980270:intron | 30.0% |
TTCCCTAATAAAAACATGGA+GGG | + | chr6_4:18269699-18269718 | None:intergenic | 30.0% | |
ACTCTTCCCTAATAAAAACA+TGG | + | chr6_4:18269703-18269722 | None:intergenic | 30.0% | |
AAATAACTACAGAGAAATGG+GGG | + | chr6_4:18269796-18269815 | None:intergenic | 30.0% | |
CCGTTATTAAAGAACACTAA+TGG | + | chr6_4:18269942-18269961 | None:intergenic | 30.0% | |
TAAGCTATGCTATATTGCTA+TGG | + | chr6_4:18269967-18269986 | None:intergenic | 30.0% | |
!!! | ACTATCCTAGTTTTGCTATT+AGG | - | chr6_4:18270017-18270036 | Msa0980270:CDS | 30.0% |
!!! | CTATCCTAGTTTTGCTATTA+GGG | - | chr6_4:18270018-18270037 | Msa0980270:CDS | 30.0% |
AGAAATATATTGGCAGACAT+TGG | - | chr6_4:18270190-18270209 | Msa0980270:CDS | 30.0% | |
GAAATATATTGGCAGACATT+GGG | - | chr6_4:18270191-18270210 | Msa0980270:CDS | 30.0% | |
TAATACCATGTTGAAAAAGG+AGG | - | chr6_4:18270248-18270267 | Msa0980270:intron | 30.0% | |
!!! | TTGCTTGTTTTATGATGGTA+TGG | - | chr6_4:18270563-18270582 | Msa0980270:intron | 30.0% |
TGGCAAAAATATCAATTGTG+AGG | + | chr6_4:18270992-18271011 | None:intergenic | 30.0% | |
TGTAAACCTTGATGAAAGTT+CGG | - | chr6_4:18271042-18271061 | Msa0980270:intron | 30.0% | |
TAAAATCCGAACTTTCATCA+AGG | + | chr6_4:18271051-18271070 | None:intergenic | 30.0% | |
CATGTTCACTAATCAAATCT+TGG | + | chr6_4:18271079-18271098 | None:intergenic | 30.0% | |
CGTCCAATTAAAATACCAAA+TGG | - | chr6_4:18271220-18271239 | Msa0980270:intron | 30.0% | |
!!! | TCGCCATTTGGTATTTTAAT+TGG | + | chr6_4:18271226-18271245 | None:intergenic | 30.0% |
! | TTCTTCTTCTTCTTTTCTAG+GGG | + | chr6_4:18271337-18271356 | None:intergenic | 30.0% |
! | CTTCTTCTTCTTCTTTTCTA+GGG | + | chr6_4:18271338-18271357 | None:intergenic | 30.0% |
! | TCTTCTTCTTCTTCTTTTCT+AGG | + | chr6_4:18271339-18271358 | None:intergenic | 30.0% |
AAAGCAAAAAGTAATGCATC+AGG | + | chr6_4:18271471-18271490 | None:intergenic | 30.0% | |
AAGAGGTTTACATATTTCCT+TGG | + | chr6_4:18272113-18272132 | None:intergenic | 30.0% | |
! | TGGTTCTTTGAAGATTGTAT+TGG | + | chr6_4:18272270-18272289 | None:intergenic | 30.0% |
!! | TGTTTGTTCTTTTGGTTAGT+TGG | - | chr6_4:18272324-18272343 | Msa0980270:intron | 30.0% |
! | AGTTTGCTTAAAATGCTTTC+AGG | - | chr6_4:18272477-18272496 | Msa0980270:intron | 30.0% |
GTTTGCTTAAAATGCTTTCA+GGG | - | chr6_4:18272478-18272497 | Msa0980270:intron | 30.0% | |
TTTGCTTAAAATGCTTTCAG+GGG | - | chr6_4:18272479-18272498 | Msa0980270:intron | 30.0% | |
! | TCTCTCTGATATTGATGATA+AGG | - | chr6_4:18272590-18272609 | Msa0980270:intron | 30.0% |
GTTCTCAAACATAGTCTAAA+TGG | - | chr6_4:18272814-18272833 | Msa0980270:intron | 30.0% | |
AAAACTGGATTATAAGGTGA+GGG | - | chr6_4:18272899-18272918 | Msa0980270:intron | 30.0% | |
! | TGCCTTATATCTTTTCTATG+TGG | - | chr6_4:18272948-18272967 | Msa0980270:CDS | 30.0% |
! | GCCTTATATCTTTTCTATGT+GGG | - | chr6_4:18272949-18272968 | Msa0980270:CDS | 30.0% |
TCCCACATAGAAAAGATATA+AGG | + | chr6_4:18272953-18272972 | None:intergenic | 30.0% | |
ATAAAAACCTAATGCGGTAT+CGG | + | chr6_4:18273069-18273088 | None:intergenic | 30.0% | |
CTCAACATAAAAACCTAATG+CGG | + | chr6_4:18273075-18273094 | None:intergenic | 30.0% | |
TATGATGTGTAAATAGTTCC+GGG | - | chr6_4:18273122-18273141 | Msa0980270:intron | 30.0% | |
!!! | CTCTTTGTTTTTCATTAAGG+TGG | - | chr6_4:18273231-18273250 | Msa0980270:intron | 30.0% |
! | AATATCCACCATAAAAGCAT+GGG | + | chr6_4:18273417-18273436 | None:intergenic | 30.0% |
AAATATCCACCATAAAAGCA+TGG | + | chr6_4:18273418-18273437 | None:intergenic | 30.0% | |
AATCAAGATGCAAGAATGAT+AGG | + | chr6_4:18273549-18273568 | None:intergenic | 30.0% | |
!! | AGCATACAACATTTTAGCAA+GGG | + | chr6_4:18273682-18273701 | None:intergenic | 30.0% |
AAATGTTGTATGCTGCATAT+AGG | - | chr6_4:18273688-18273707 | Msa0980270:intron | 30.0% | |
!! | TAATAATCGAGAGTATCTTG+AGG | - | chr6_4:18273769-18273788 | Msa0980270:intron | 30.0% |
AAAATCCAGAAAGGTAACTT+TGG | - | chr6_4:18274102-18274121 | Msa0980270:intron | 30.0% | |
!!! | AACTTTGGAATCATTTTTCG+GGG | - | chr6_4:18274117-18274136 | Msa0980270:intron | 30.0% |
GTATCTGATTATTGGTATTC+TGG | - | chr6_4:18274219-18274238 | Msa0980270:intron | 30.0% | |
GATAAGAATATGCAAACACA+TGG | - | chr6_4:18274262-18274281 | Msa0980270:intron | 30.0% | |
TAAGAATATGCAAACACATG+GGG | - | chr6_4:18274264-18274283 | Msa0980270:intron | 30.0% | |
TTGTAAAAGCTAGCTATCAA+GGG | - | chr6_4:18274300-18274319 | Msa0980270:intron | 30.0% | |
GTTAAATATACTACTCGATG+TGG | - | chr6_4:18274338-18274357 | Msa0980270:intron | 30.0% | |
AAACAGTTCACATCTCAAAA+GGG | + | chr6_4:18274725-18274744 | None:intergenic | 30.0% | |
CCTTTATTACCGGTAATAAA+GGG | + | chr6_4:18274762-18274781 | None:intergenic | 30.0% | |
TCCTTTATTACCGGTAATAA+AGG | + | chr6_4:18274765-18274784 | None:intergenic | 30.0% | |
TTTATTACCGGTAATAAAGG+AGG | - | chr6_4:18274764-18274783 | Msa0980270:intron | 30.0% | |
TACACCATGCAGAAAATAAA+CGG | + | chr6_4:18274814-18274833 | None:intergenic | 30.0% | |
GTAAATGTTAGTAATGCATC+TGG | - | chr6_4:18274883-18274902 | Msa0980270:intron | 30.0% | |
TCTTGGAAAATGTTGGATAA+AGG | + | chr6_4:18274981-18275000 | None:intergenic | 30.0% | |
CACAAACAAAAGCCAAAATA+TGG | + | chr6_4:18275137-18275156 | None:intergenic | 30.0% | |
ATCATTATGTGACCATTGAT+AGG | + | chr6_4:18275176-18275195 | None:intergenic | 30.0% | |
! | TGTTTTGTAAACTTTTCACC+AGG | + | chr6_4:18275299-18275318 | None:intergenic | 30.0% |
!! | TTGTTACTTTGCATATTTGC+AGG | - | chr6_4:18275327-18275346 | Msa0980270:intron | 30.0% |
GGTATTTATTATGAAAACGC+AGG | - | chr6_4:18275438-18275457 | Msa0980270:intron | 30.0% | |
! | CATATTTCATTTTGCATGTG+CGG | - | chr6_4:18275566-18275585 | Msa0980270:intron | 30.0% |
GAAATGCTATTATTCGAACT+TGG | - | chr6_4:18275854-18275873 | Msa0980270:intron | 30.0% | |
GACTAATGAAAAGTCTATGT+TGG | - | chr6_4:18276103-18276122 | Msa0980270:intron | 30.0% | |
GTCATGTATATACGGAAAAA+TGG | + | chr6_4:18276280-18276299 | None:intergenic | 30.0% | |
! | GAAAGTACGATTTGAAACAA+AGG | - | chr6_4:18276441-18276460 | Msa0980270:intron | 30.0% |
!! | TATGTCTCATAGTCATTTTC+TGG | + | chr6_4:18276541-18276560 | None:intergenic | 30.0% |
TCAATATCCATAAAAACCAC+CGG | + | chr6_4:18276578-18276597 | None:intergenic | 30.0% | |
! | GTGGTTTTTATGGATATTGA+TGG | - | chr6_4:18276578-18276597 | Msa0980270:intron | 30.0% |
CGAATATAATCAAACATGGT+TGG | - | chr6_4:18276658-18276677 | Msa0980270:intron | 30.0% | |
! | CCAAAACTTTTGACAATCTT+TGG | + | chr6_4:18276698-18276717 | None:intergenic | 30.0% |
! | CCAAAGATTGTCAAAAGTTT+TGG | - | chr6_4:18276695-18276714 | Msa0980270:CDS | 30.0% |
TATATTGAGGTTCATCAAAC+AGG | - | chr6_4:18276718-18276737 | Msa0980270:CDS | 30.0% | |
AATTACCACTCATTATGTGT+TGG | - | chr6_4:18276812-18276831 | Msa0980270:five_prime_UTR | 30.0% | |
AAATACCAACACATAATGAG+TGG | + | chr6_4:18276820-18276839 | None:intergenic | 30.0% | |
TTTGGCAGGAATTTATACAC+CGG | + | chr6_4:18264493-18264512 | None:intergenic | 35.0% | |
AGAAGAAGGATTAGGGTTTA+GGG | + | chr6_4:18264516-18264535 | None:intergenic | 35.0% | |
AAGAAGAAGGATTAGGGTTT+AGG | + | chr6_4:18264517-18264536 | None:intergenic | 35.0% | |
TGAACGAAGAAGAAGGATTA+GGG | + | chr6_4:18264523-18264542 | None:intergenic | 35.0% | |
ATGAACGAAGAAGAAGGATT+AGG | + | chr6_4:18264524-18264543 | None:intergenic | 35.0% | |
AGAATGATGAACGAAGAAGA+AGG | + | chr6_4:18264530-18264549 | None:intergenic | 35.0% | |
TGCATTGTGATCATTGTTTG+AGG | - | chr6_4:18264647-18264666 | Msa0980270:three_prime_UTR | 35.0% | |
! | TGGATTGGATTATGGATATC+AGG | - | chr6_4:18265094-18265113 | Msa0980270:intron | 35.0% |
! | AATGAGCCAACTTTTCAGAA+AGG | - | chr6_4:18265162-18265181 | Msa0980270:intron | 35.0% |
AAACGCTTCTAATGATCCAA+CGG | + | chr6_4:18265585-18265604 | None:intergenic | 35.0% | |
!!! | TTTTTTACACTGACTGTGCA+TGG | - | chr6_4:18265670-18265689 | Msa0980270:CDS | 35.0% |
!! | TTTTTACACTGACTGTGCAT+GGG | - | chr6_4:18265671-18265690 | Msa0980270:intron | 35.0% |
!! | TAGGGACTATTTTGGACTTA+TGG | - | chr6_4:18265749-18265768 | Msa0980270:intron | 35.0% |
TTTGGACTTATGGTAAGCAA+TGG | - | chr6_4:18265759-18265778 | Msa0980270:intron | 35.0% | |
GAAGTTCAGATAGAATGGTA+TGG | - | chr6_4:18265813-18265832 | Msa0980270:intron | 35.0% | |
GAAAAACAATAGGTACCCTT+TGG | - | chr6_4:18265995-18266014 | Msa0980270:CDS | 35.0% | |
! | CTTTTAAACTTGAGACGGAA+TGG | - | chr6_4:18266052-18266071 | Msa0980270:intron | 35.0% |
TAACAAATTCCCTCGCAAAA+AGG | - | chr6_4:18266158-18266177 | Msa0980270:intron | 35.0% | |
! | ATGAAAGTGTAAAAGCACAC+TGG | - | chr6_4:18266193-18266212 | Msa0980270:intron | 35.0% |
!! | GTAATTATAAGTGTCGGTGT+CGG | + | chr6_4:18266711-18266730 | None:intergenic | 35.0% |
TATCATGAAAACGTATGAGC+TGG | - | chr6_4:18266951-18266970 | Msa0980270:intron | 35.0% | |
AGAGACAGAAACCAAACATA+GGG | - | chr6_4:18267097-18267116 | Msa0980270:intron | 35.0% | |
AACAAGATTAGAGTGACTTG+TGG | - | chr6_4:18267203-18267222 | Msa0980270:intron | 35.0% | |
ACATCATAGCATGTTAGGTT+AGG | + | chr6_4:18267241-18267260 | None:intergenic | 35.0% | |
TCTGAATGTTGTATTCATGC+AGG | + | chr6_4:18267283-18267302 | None:intergenic | 35.0% | |
GACTAGAGAAAAACTTTACC+AGG | - | chr6_4:18267616-18267635 | Msa0980270:CDS | 35.0% | |
CTAGAGAAAAACTTTACCAG+GGG | - | chr6_4:18267618-18267637 | Msa0980270:CDS | 35.0% | |
CTTGTCTTTATCTTGCATTC+CGG | - | chr6_4:18267667-18267686 | Msa0980270:intron | 35.0% | |
AGTGTCTACGATTTATGTGT+GGG | + | chr6_4:18267902-18267921 | None:intergenic | 35.0% | |
AAGTGTCTACGATTTATGTG+TGG | + | chr6_4:18267903-18267922 | None:intergenic | 35.0% | |
! | ATGAAGAGTACACACACTAT+CGG | + | chr6_4:18267956-18267975 | None:intergenic | 35.0% |
TGTGTACTCTTCATTGTTGA+GGG | - | chr6_4:18267962-18267981 | Msa0980270:intron | 35.0% | |
!!! | TGCAGCTTTTGAAAGTGTTA+AGG | - | chr6_4:18268368-18268387 | Msa0980270:intron | 35.0% |
TCAACAAGCTTTCGAACAAT+CGG | + | chr6_4:18268406-18268425 | None:intergenic | 35.0% | |
! | AAAAGTATATGCAGGCCATT+AGG | + | chr6_4:18268621-18268640 | None:intergenic | 35.0% |
! | ACTTTTATATGCTAGCATGG+CGG | - | chr6_4:18268635-18268654 | Msa0980270:intron | 35.0% |
TTTCTGACATGAAACGTAAC+TGG | - | chr6_4:18268844-18268863 | Msa0980270:CDS | 35.0% | |
CAATGTTCGAAAAACAGACA+GGG | - | chr6_4:18268955-18268974 | Msa0980270:intron | 35.0% | |
TTTGATCTCATTTCCTACGA+AGG | - | chr6_4:18269173-18269192 | Msa0980270:intron | 35.0% | |
! | TTTCAAGTAAAAGCCTTCGT+AGG | + | chr6_4:18269189-18269208 | None:intergenic | 35.0% |
CACTCTGAACAAAAGAATCA+AGG | + | chr6_4:18269399-18269418 | None:intergenic | 35.0% | |
!! | TTCTTTTGTTCAGAGTGTTC+TGG | - | chr6_4:18269402-18269421 | Msa0980270:intron | 35.0% |
CTTTCCATAATAAGCTTAGG+AGG | + | chr6_4:18269558-18269577 | None:intergenic | 35.0% | |
CTCCTAAGCTTATTATGGAA+AGG | - | chr6_4:18269556-18269575 | Msa0980270:intron | 35.0% | |
TTTGTCTTTGGTATGCTCAT+GGG | - | chr6_4:18269592-18269611 | Msa0980270:intron | 35.0% | |
AATTGACAACACTGTCGAAT+AGG | + | chr6_4:18269640-18269659 | None:intergenic | 35.0% | |
! | TTCGACAGTGTTGTCAATTT+TGG | - | chr6_4:18269641-18269660 | Msa0980270:intron | 35.0% |
TTAATGTTGGGATTCATTGG+TGG | - | chr6_4:18269669-18269688 | Msa0980270:intron | 35.0% | |
TAATGTTGGGATTCATTGGT+GGG | - | chr6_4:18269670-18269689 | Msa0980270:intron | 35.0% | |
CTTCCCTAATAAAAACATGG+AGG | + | chr6_4:18269700-18269719 | None:intergenic | 35.0% | |
ATGTTGAAAAAGGAGGAAGA+GGG | - | chr6_4:18270255-18270274 | Msa0980270:intron | 35.0% | |
! | TCAATGTTGCTTCACATACA+TGG | + | chr6_4:18270465-18270484 | None:intergenic | 35.0% |
AAACTAATTTACACCGACGA+TGG | - | chr6_4:18270910-18270929 | Msa0980270:CDS | 35.0% | |
! | CTTTGGATATTTAGGGTTTG+TGG | + | chr6_4:18271012-18271031 | None:intergenic | 35.0% |
! | GATTGATGAGTTGAATGCAA+TGG | - | chr6_4:18271180-18271199 | Msa0980270:intron | 35.0% |
ACTGAACAAATGCATTTCAG+AGG | - | chr6_4:18271246-18271265 | Msa0980270:intron | 35.0% | |
! | TCTTCTTCTTCTTTTCTAGG+GGG | + | chr6_4:18271336-18271355 | None:intergenic | 35.0% |
GAAGAAGAAGAAGAAGAAGA+AGG | - | chr6_4:18271345-18271364 | Msa0980270:intron | 35.0% | |
ATAATCGGTAGAACGATAAG+TGG | + | chr6_4:18271514-18271533 | None:intergenic | 35.0% | |
TTGCAGTTTGATAAACTCTC+TGG | - | chr6_4:18271533-18271552 | Msa0980270:intron | 35.0% | |
AATGGTAAAGTCACATTCTG+AGG | - | chr6_4:18271610-18271629 | Msa0980270:intron | 35.0% | |
CAGATGATGTAAGTAGAACT+TGG | - | chr6_4:18271648-18271667 | Msa0980270:intron | 35.0% | |
AACATGGATCATGATATCCA+GGG | + | chr6_4:18271836-18271855 | None:intergenic | 35.0% | |
GTGACATTTATTGTCCAACA+TGG | + | chr6_4:18271852-18271871 | None:intergenic | 35.0% | |
TTTGAGTGTTTGACATGTGT+CGG | - | chr6_4:18271909-18271928 | Msa0980270:intron | 35.0% | |
TTGAATGTAACCACATGTGT+TGG | + | chr6_4:18271955-18271974 | None:intergenic | 35.0% | |
!! | ATGAAGTACTGACATAGACA+AGG | + | chr6_4:18272048-18272067 | None:intergenic | 35.0% |
AAGTCCATTATTCTCACTCT+GGG | + | chr6_4:18272163-18272182 | None:intergenic | 35.0% | |
GTGTTAGATGCTCATATATG+TGG | + | chr6_4:18272248-18272267 | None:intergenic | 35.0% | |
!! | TTCTTTTGGTTAGTTGGCAA+AGG | - | chr6_4:18272330-18272349 | Msa0980270:intron | 35.0% |
CAGAGGAAAGTAACTCTATT+TGG | + | chr6_4:18272378-18272397 | None:intergenic | 35.0% | |
! | AAGAACCCACCAATATTTTC+AGG | + | chr6_4:18272403-18272422 | None:intergenic | 35.0% |
TTGCTTAAAATGCTTTCAGG+GGG | - | chr6_4:18272480-18272499 | Msa0980270:intron | 35.0% | |
! | CTCTGATATTGATGATAAGG+AGG | - | chr6_4:18272593-18272612 | Msa0980270:intron | 35.0% |
AAATTCCATACTTCCTGCAT+TGG | - | chr6_4:18272624-18272643 | Msa0980270:intron | 35.0% | |
AAAATCCAATGCAGGAAGTA+TGG | + | chr6_4:18272632-18272651 | None:intergenic | 35.0% | |
AATGATGAACAATATCGCGA+TGG | + | chr6_4:18272660-18272679 | None:intergenic | 35.0% | |
!! | CCTTATAATCCAGTTTTGTG+AGG | + | chr6_4:18272896-18272915 | None:intergenic | 35.0% |
CCTCACAAAACTGGATTATA+AGG | - | chr6_4:18272893-18272912 | Msa0980270:intron | 35.0% | |
CAAAACTGGATTATAAGGTG+AGG | - | chr6_4:18272898-18272917 | Msa0980270:intron | 35.0% | |
AAACTGGATTATAAGGTGAG+GGG | - | chr6_4:18272900-18272919 | Msa0980270:intron | 35.0% | |
! | TATCTTTTCTATGTGGGACT+TGG | - | chr6_4:18272955-18272974 | Msa0980270:CDS | 35.0% |
! | ATCTTTTCTATGTGGGACTT+GGG | - | chr6_4:18272956-18272975 | Msa0980270:CDS | 35.0% |
! | ATTTTCCAGCTACTTGGAAA+AGG | + | chr6_4:18273171-18273190 | None:intergenic | 35.0% |
! | TCTTGCTAGTTGAAAGTGTA+AGG | - | chr6_4:18273378-18273397 | Msa0980270:intron | 35.0% |
! | CTTGCTAGTTGAAAGTGTAA+GGG | - | chr6_4:18273379-18273398 | Msa0980270:intron | 35.0% |
! | AATAACCCATGCTTTTATGG+TGG | - | chr6_4:18273409-18273428 | Msa0980270:intron | 35.0% |
ATGAATGCAGGAACAAGAAA+TGG | + | chr6_4:18273454-18273473 | None:intergenic | 35.0% | |
GCATCTTGATTTAAATCCCT+AGG | - | chr6_4:18273558-18273577 | Msa0980270:intron | 35.0% | |
!! | TACAACATTTTAGCAAGGGA+TGG | + | chr6_4:18273678-18273697 | None:intergenic | 35.0% |
!! | CAGCATACAACATTTTAGCA+AGG | + | chr6_4:18273683-18273702 | None:intergenic | 35.0% |
ACGTTACAAGAAGCAGATAT+GGG | - | chr6_4:18273742-18273761 | Msa0980270:CDS | 35.0% | |
! | AAATCTGAAATCGCAAACCA+GGG | + | chr6_4:18273898-18273917 | None:intergenic | 35.0% |
! | AAAATCTGAAATCGCAAACC+AGG | + | chr6_4:18273899-18273918 | None:intergenic | 35.0% |
TCTACCTTCAATTCTTGTAC+AGG | - | chr6_4:18273955-18273974 | Msa0980270:CDS | 35.0% | |
TGTTCCTGTACAAGAATTGA+AGG | + | chr6_4:18273962-18273981 | None:intergenic | 35.0% | |
TGATTCCAAAGTTACCTTTC+TGG | + | chr6_4:18274110-18274129 | None:intergenic | 35.0% | |
!!! | ACTTTGGAATCATTTTTCGG+GGG | - | chr6_4:18274118-18274137 | Msa0980270:intron | 35.0% |
AAAACACTGAGCAAGAATAC+TGG | + | chr6_4:18274175-18274194 | None:intergenic | 35.0% | |
!!! | GATAGCTAGCTTTTACAAGA+GGG | + | chr6_4:18274298-18274317 | None:intergenic | 35.0% |
!!! | TGATAGCTAGCTTTTACAAG+AGG | + | chr6_4:18274299-18274318 | None:intergenic | 35.0% |
CTTGTAAAAGCTAGCTATCA+AGG | - | chr6_4:18274299-18274318 | Msa0980270:intron | 35.0% | |
CTGTTGTATTGTAACTTCAG+AGG | + | chr6_4:18274583-18274602 | None:intergenic | 35.0% | |
AAGGGAAATTGCGAATCATT+GGG | + | chr6_4:18274707-18274726 | None:intergenic | 35.0% | |
AAAGGGAAATTGCGAATCAT+TGG | + | chr6_4:18274708-18274727 | None:intergenic | 35.0% | |
GAAACAGTTCACATCTCAAA+AGG | + | chr6_4:18274726-18274745 | None:intergenic | 35.0% | |
ATTACCGGTAATAAAGGGAA+AGG | + | chr6_4:18274759-18274778 | None:intergenic | 35.0% | |
CCCTTTATTACCGGTAATAA+AGG | - | chr6_4:18274761-18274780 | Msa0980270:intron | 35.0% | |
ATGCAGAAAATAAACGGAAG+AGG | + | chr6_4:18274808-18274827 | None:intergenic | 35.0% | |
!! | TCTTCCGTTTATTTTCTGCA+TGG | - | chr6_4:18274807-18274826 | Msa0980270:intron | 35.0% |
ACAGGACATATGTGAGATTA+CGG | + | chr6_4:18274848-18274867 | None:intergenic | 35.0% | |
TACTAACATTTACGAAGCTG+CGG | + | chr6_4:18274876-18274895 | None:intergenic | 35.0% | |
TGTTAATCAGCACATGAATC+CGG | + | chr6_4:18274925-18274944 | None:intergenic | 35.0% | |
TCCAAGAACTTTAACAGAGA+TGG | - | chr6_4:18274994-18275013 | Msa0980270:intron | 35.0% | |
ACCATCTCTGTTAAAGTTCT+TGG | + | chr6_4:18274998-18275017 | None:intergenic | 35.0% | |
TCAGCAAAGTTGTACTATGA+AGG | + | chr6_4:18275269-18275288 | None:intergenic | 35.0% | |
TTGCATATTTGCAGGAAAAG+AGG | - | chr6_4:18275335-18275354 | Msa0980270:intron | 35.0% | |
AAGATAAGGGAGAGAATTAC+CGG | + | chr6_4:18275760-18275779 | None:intergenic | 35.0% | |
ATACAGCTGTGGAAATTAGA+AGG | + | chr6_4:18275914-18275933 | None:intergenic | 35.0% | |
CAAAAGAAATGATACAGCTG+TGG | + | chr6_4:18275925-18275944 | None:intergenic | 35.0% | |
AAAGAAGCTGCTTGTAGAAA+TGG | + | chr6_4:18276011-18276030 | None:intergenic | 35.0% | |
!! | CGTACTTTCTTGTTATTCTC+TGG | + | chr6_4:18276430-18276449 | None:intergenic | 35.0% |
! | AGTACGATTTGAAACAAAGG+AGG | - | chr6_4:18276444-18276463 | Msa0980270:intron | 35.0% |
TGAAACAAAGGAGGATGAAT+TGG | - | chr6_4:18276453-18276472 | Msa0980270:intron | 35.0% | |
! | GTGTTGGTATTTAACCAAAC+TGG | - | chr6_4:18276828-18276847 | Msa0980270:five_prime_UTR | 35.0% |
TGCCGTGAATAAACTGTCAA+AGG | + | chr6_4:18264456-18264475 | None:intergenic | 40.0% | |
! | CAGTTTATTCACGGCAGTTT+TGG | - | chr6_4:18264460-18264479 | Msa0980270:three_prime_UTR | 40.0% |
! | AAGGATTAGGGTTTAGGGTT+TGG | + | chr6_4:18264511-18264530 | None:intergenic | 40.0% |
CATTGTTTGAGGAACGTTTC+TGG | - | chr6_4:18264658-18264677 | Msa0980270:three_prime_UTR | 40.0% | |
! | ATCAGGTGTTGTGAGTATTG+TGG | - | chr6_4:18265111-18265130 | Msa0980270:intron | 40.0% |
! | TCAGGTGTTGTGAGTATTGT+GGG | - | chr6_4:18265112-18265131 | Msa0980270:intron | 40.0% |
!! | CTGGACAGGTAATGGAATTA+AGG | - | chr6_4:18265190-18265209 | Msa0980270:intron | 40.0% |
TCTCAATCAATCGTAACCGT+TGG | - | chr6_4:18265566-18265585 | Msa0980270:intron | 40.0% | |
GGATGATGCGGAAAAACAAT+AGG | - | chr6_4:18265985-18266004 | Msa0980270:CDS | 40.0% | |
GAGACGGAATGGAATAGAAT+TGG | - | chr6_4:18266063-18266082 | Msa0980270:intron | 40.0% | |
CGGAATGGAATAGAATTGGA+TGG | - | chr6_4:18266067-18266086 | Msa0980270:intron | 40.0% | |
! | CATAGCAAAAGGTATGGAGT+GGG | + | chr6_4:18266100-18266119 | None:intergenic | 40.0% |
! | TCATAGCAAAAGGTATGGAG+TGG | + | chr6_4:18266101-18266120 | None:intergenic | 40.0% |
AAATTCCCTCGCAAAAAGGA+AGG | - | chr6_4:18266162-18266181 | Msa0980270:intron | 40.0% | |
AATTCCCTCGCAAAAAGGAA+GGG | - | chr6_4:18266163-18266182 | Msa0980270:intron | 40.0% | |
GATAAGGGCGGTTAATGAAA+TGG | - | chr6_4:18266407-18266426 | Msa0980270:intron | 40.0% | |
TATGAAGCACAGACATTCCT+CGG | - | chr6_4:18266650-18266669 | Msa0980270:intron | 40.0% | |
ATGTAGCATGGATACAGACA+CGG | + | chr6_4:18266808-18266827 | None:intergenic | 40.0% | |
GAGAGACAGAAACCAAACAT+AGG | - | chr6_4:18267096-18267115 | Msa0980270:intron | 40.0% | |
TGCTGACATCATAGCATGTT+AGG | + | chr6_4:18267246-18267265 | None:intergenic | 40.0% | |
! | TCTGACATGCCAATTTTCAC+TGG | - | chr6_4:18267389-18267408 | Msa0980270:CDS | 40.0% |
GCTGCAATTCCAGTGAAAAT+TGG | + | chr6_4:18267401-18267420 | None:intergenic | 40.0% | |
AGAAATCTATGTCGCAACCT+TGG | - | chr6_4:18267434-18267453 | Msa0980270:CDS | 40.0% | |
GTTGTATGCCTAGTGAAGAT+AGG | - | chr6_4:18267594-18267613 | Msa0980270:intron | 40.0% | |
TCTCTAGTCCTATCTTCACT+AGG | + | chr6_4:18267605-18267624 | None:intergenic | 40.0% | |
! | TTTTCATCCGTGCACTAAAC+TGG | - | chr6_4:18267808-18267827 | Msa0980270:intron | 40.0% |
TCAATCTGTGCACAGGAAAA+GGG | - | chr6_4:18267869-18267888 | Msa0980270:intron | 40.0% | |
! | GTACACACACTATCGGATTT+TGG | + | chr6_4:18267949-18267968 | None:intergenic | 40.0% |
GTGTGTACTCTTCATTGTTG+AGG | - | chr6_4:18267961-18267980 | Msa0980270:intron | 40.0% | |
CAACAAGCTTTCGAACAATC+GGG | + | chr6_4:18268405-18268424 | None:intergenic | 40.0% | |
ATATGCAGGCCATTAGGTAT+AGG | + | chr6_4:18268615-18268634 | None:intergenic | 40.0% | |
!! | CCTGTCTGTTTTTCGAACAT+TGG | + | chr6_4:18268957-18268976 | None:intergenic | 40.0% |
CCAATGTTCGAAAAACAGAC+AGG | - | chr6_4:18268954-18268973 | Msa0980270:intron | 40.0% | |
ACAACATCTGATTTCGAGCA+TGG | + | chr6_4:18269041-18269060 | None:intergenic | 40.0% | |
! | ATGAGGCTTTTAGCAACAAG+TGG | + | chr6_4:18269099-18269118 | None:intergenic | 40.0% |
! | AAGCATTTTCTCTTGGCATG+AGG | + | chr6_4:18269116-18269135 | None:intergenic | 40.0% |
AGTCATACAGTGAGTAAGTG+AGG | - | chr6_4:18269208-18269227 | Msa0980270:intron | 40.0% | |
GTCATACAGTGAGTAAGTGA+GGG | - | chr6_4:18269209-18269228 | Msa0980270:intron | 40.0% | |
GTTGAAATTCTCAGTACAGC+TGG | - | chr6_4:18269284-18269303 | Msa0980270:intron | 40.0% | |
! | AAACGTGAAGTTGTTTGCTG+TGG | + | chr6_4:18269316-18269335 | None:intergenic | 40.0% |
CTCTTCAGAGAAGCGAAAAA+AGG | + | chr6_4:18269360-18269379 | None:intergenic | 40.0% | |
GTTTGTCTTTGGTATGCTCA+TGG | - | chr6_4:18269591-18269610 | Msa0980270:intron | 40.0% | |
!! | TCATGGGCATTTCAAGTTCA+AGG | - | chr6_4:18269608-18269627 | Msa0980270:intron | 40.0% |
!! | CATGGGCATTTCAAGTTCAA+GGG | - | chr6_4:18269609-18269628 | Msa0980270:intron | 40.0% |
! | TAGTGTCGCAGTTTTCATAG+TGG | + | chr6_4:18270001-18270020 | None:intergenic | 40.0% |
!!! | TTTTGCTATTAGGGCCACAT+TGG | - | chr6_4:18270027-18270046 | Msa0980270:CDS | 40.0% |
ATTCCCAAAAAGGGTGAACT+AGG | - | chr6_4:18270124-18270143 | Msa0980270:CDS | 40.0% | |
CAGAAATTGGGATTGCTACA+TGG | - | chr6_4:18270156-18270175 | Msa0980270:CDS | 40.0% | |
GACATTGGGTCATCATGAAT+TGG | - | chr6_4:18270205-18270224 | Msa0980270:intron | 40.0% | |
!!! | CTCTTCCTCCTTTTTCAACA+TGG | + | chr6_4:18270256-18270275 | None:intergenic | 40.0% |
CATGTTGAAAAAGGAGGAAG+AGG | - | chr6_4:18270254-18270273 | Msa0980270:intron | 40.0% | |
! | AATGAAGCATTACACGAGAC+AGG | + | chr6_4:18270408-18270427 | None:intergenic | 40.0% |
TGTCTCGTGTAATGCTTCAT+TGG | - | chr6_4:18270407-18270426 | Msa0980270:intron | 40.0% | |
GCAGAATGGTAGATTCTTAG+AGG | + | chr6_4:18270816-18270835 | None:intergenic | 40.0% | |
CATTTGTTCAGTTCGCCATT+TGG | + | chr6_4:18271238-18271257 | None:intergenic | 40.0% | |
GAACAAATGCATTTCAGAGG+AGG | - | chr6_4:18271249-18271268 | Msa0980270:intron | 40.0% | |
CAGTTTGATAAACTCTCTGG+TGG | - | chr6_4:18271536-18271555 | Msa0980270:intron | 40.0% | |
! | AAAATGAGTTCTAACTGCCC+TGG | - | chr6_4:18271816-18271835 | Msa0980270:intron | 40.0% |
CAACATGGATCATGATATCC+AGG | + | chr6_4:18271837-18271856 | None:intergenic | 40.0% | |
CTGGATATCATGATCCATGT+TGG | - | chr6_4:18271835-18271854 | Msa0980270:intron | 40.0% | |
!! | GCACCAACACTTTAGTTTGA+AGG | - | chr6_4:18271882-18271901 | Msa0980270:intron | 40.0% |
ACGCCTTCAAACTAAAGTGT+TGG | + | chr6_4:18271888-18271907 | None:intergenic | 40.0% | |
!! | TGTTGGTGTCGTATGAATGT+CGG | + | chr6_4:18271938-18271957 | None:intergenic | 40.0% |
TTTCCTTGGCAGTAACATGT+CGG | + | chr6_4:18272099-18272118 | None:intergenic | 40.0% | |
AGTCCATTATTCTCACTCTG+GGG | + | chr6_4:18272162-18272181 | None:intergenic | 40.0% | |
CAAGTCCATTATTCTCACTC+TGG | + | chr6_4:18272164-18272183 | None:intergenic | 40.0% | |
TCCTCTGAGCCTGAAAATAT+TGG | - | chr6_4:18272391-18272410 | Msa0980270:CDS | 40.0% | |
!! | ACCAATATTTTCAGGCTCAG+AGG | + | chr6_4:18272395-18272414 | None:intergenic | 40.0% |
TCTGAGCCTGAAAATATTGG+TGG | - | chr6_4:18272394-18272413 | Msa0980270:CDS | 40.0% | |
CTGAGCCTGAAAATATTGGT+GGG | - | chr6_4:18272395-18272414 | Msa0980270:CDS | 40.0% | |
ATCATGCTCACCATCTTTAG+TGG | + | chr6_4:18272517-18272536 | None:intergenic | 40.0% | |
TGGCTAAGAAAATCCAATGC+AGG | + | chr6_4:18272640-18272659 | None:intergenic | 40.0% | |
!! | CAGTTTTGTGAGGATGAGTT+AGG | + | chr6_4:18272886-18272905 | None:intergenic | 40.0% |
CTAACTCATCCTCACAAAAC+TGG | - | chr6_4:18272884-18272903 | Msa0980270:intron | 40.0% | |
!! | CAAAGCATTTTCCAGCTACT+TGG | + | chr6_4:18273177-18273196 | None:intergenic | 40.0% |
! | TTCTCATGTCAACTTTTGCG+AGG | - | chr6_4:18273261-18273280 | Msa0980270:intron | 40.0% |
! | GTATGCTGCATATAGGTTGA+TGG | - | chr6_4:18273695-18273714 | Msa0980270:intron | 40.0% |
CACGTTACAAGAAGCAGATA+TGG | - | chr6_4:18273741-18273760 | Msa0980270:CDS | 40.0% | |
! | TTCTACATCCAACTCTGAAG+TGG | - | chr6_4:18273849-18273868 | Msa0980270:intron | 40.0% |
!! | TCTACATCCAACTCTGAAGT+GGG | - | chr6_4:18273850-18273869 | Msa0980270:intron | 40.0% |
TCTTGTGTGGAAGTTCAATG+TGG | - | chr6_4:18273920-18273939 | Msa0980270:CDS | 40.0% | |
TGTACAGGAACAAGCTATCA+AGG | - | chr6_4:18273970-18273989 | Msa0980270:intron | 40.0% | |
AGATGTGGCAAAATCCAGAA+AGG | - | chr6_4:18274093-18274112 | Msa0980270:intron | 40.0% | |
CGTGCACTGTATCTGATTAT+TGG | - | chr6_4:18274211-18274230 | Msa0980270:intron | 40.0% | |
AATATGCAAACACATGGGGA+TGG | - | chr6_4:18274268-18274287 | Msa0980270:intron | 40.0% | |
! | AAGAACAGTTACCGACTGAA+GGG | + | chr6_4:18274472-18274491 | None:intergenic | 40.0% |
! | TAAGAACAGTTACCGACTGA+AGG | + | chr6_4:18274473-18274492 | None:intergenic | 40.0% |
CGGTAACTGTTCTTAGTTAC+TGG | - | chr6_4:18274478-18274497 | Msa0980270:intron | 40.0% | |
! | CTGTTATTTGACATCAGAGC+TGG | + | chr6_4:18274507-18274526 | None:intergenic | 40.0% |
! | CAGCTCTGATGTCAAATAAC+AGG | - | chr6_4:18274505-18274524 | Msa0980270:intron | 40.0% |
TCAGCCTTTCCCTTTATTAC+CGG | - | chr6_4:18274752-18274771 | Msa0980270:intron | 40.0% | |
ATACACGCCTCCTTTATTAC+CGG | + | chr6_4:18274774-18274793 | None:intergenic | 40.0% | |
TTAGTAATGCATCTGGCAGA+TGG | - | chr6_4:18274890-18274909 | Msa0980270:intron | 40.0% | |
GTTAATCAGCACATGAATCC+GGG | + | chr6_4:18274924-18274943 | None:intergenic | 40.0% | |
GGGAAGATTGGAATGGATAA+GGG | + | chr6_4:18275028-18275047 | None:intergenic | 40.0% | |
! | ACAGACGAAACAGTTTTGCA+CGG | + | chr6_4:18275099-18275118 | None:intergenic | 40.0% |
GCAAAACTGTTTCGTCTGTT+TGG | - | chr6_4:18275100-18275119 | Msa0980270:intron | 40.0% | |
GTGTGTCTCAATAGCTAAAG+TGG | - | chr6_4:18275211-18275230 | Msa0980270:intron | 40.0% | |
AACTTTGCTGAACTATGACC+TGG | - | chr6_4:18275278-18275297 | Msa0980270:intron | 40.0% | |
!!! | CTTTGTTTTCAACATTCGGC+TGG | + | chr6_4:18275419-18275438 | None:intergenic | 40.0% |
CAGCCGAATGTTGAAAACAA+AGG | - | chr6_4:18275417-18275436 | Msa0980270:intron | 40.0% | |
! | TATGATGCCTGCTCTTTTGT+AGG | - | chr6_4:18275492-18275511 | Msa0980270:intron | 40.0% |
! | TTTTGCATGTGCGGTTAAGT+TGG | - | chr6_4:18275575-18275594 | Msa0980270:intron | 40.0% |
ACTCAGCTCCAAAGTCAATT+TGG | - | chr6_4:18275708-18275727 | Msa0980270:intron | 40.0% | |
! | CAAGCGATCCAAATTGACTT+TGG | + | chr6_4:18275719-18275738 | None:intergenic | 40.0% |
CAAAGTCAATTTGGATCGCT+TGG | - | chr6_4:18275717-18275736 | Msa0980270:intron | 40.0% | |
!!! | TGCTTTTTTGCAACCTTGCA+TGG | - | chr6_4:18275985-18276004 | Msa0980270:intron | 40.0% |
GCATACATATCTTCATCAGC+CGG | + | chr6_4:18276496-18276515 | None:intergenic | 40.0% | |
CTATGAGACATATGACTACG+AGG | - | chr6_4:18276549-18276568 | Msa0980270:intron | 40.0% | |
ACTTCAGTAGAAAGAGCTTC+TGG | + | chr6_4:18276622-18276641 | None:intergenic | 40.0% | |
! | ATTAGGGTTTAGGGTTTGGC+AGG | + | chr6_4:18264507-18264526 | None:intergenic | 45.0% |
! | TCTGGAACTCGAATTGACGA+AGG | - | chr6_4:18264676-18264695 | Msa0980270:three_prime_UTR | 45.0% |
! | GTGTTGTGAGTATTGTGGGA+AGG | - | chr6_4:18265116-18265135 | Msa0980270:intron | 45.0% |
! | TGAGTATTGTGGGAAGGTGT+TGG | - | chr6_4:18265122-18265141 | Msa0980270:intron | 45.0% |
ATGGGACTTGAACTCAGGAT+TGG | - | chr6_4:18265689-18265708 | Msa0980270:intron | 45.0% | |
GACTTGAACTCAGGATTGGA+TGG | - | chr6_4:18265693-18265712 | Msa0980270:intron | 45.0% | |
TGCATGCCCCTTAAACTCAA+AGG | + | chr6_4:18265867-18265886 | None:intergenic | 45.0% | |
TTTGCAAGAGTGGGATGATG+CGG | - | chr6_4:18265973-18265992 | Msa0980270:CDS | 45.0% | |
! | CAAACCCTTCCTTTTTGCGA+GGG | + | chr6_4:18266170-18266189 | None:intergenic | 45.0% |
CTCAGGCAATTTGATAAGGG+CGG | - | chr6_4:18266395-18266414 | Msa0980270:intron | 45.0% | |
TGTAGTCCTTTGACGTGAGT+CGG | + | chr6_4:18266433-18266452 | None:intergenic | 45.0% | |
TCTATGTCGCAACCTTGGAA+TGG | - | chr6_4:18267439-18267458 | Msa0980270:CDS | 45.0% | |
AAGTTCAGATTTACGTCCCC+TGG | + | chr6_4:18267637-18267656 | None:intergenic | 45.0% | |
TTTCCTGTGCACAGATTGAG+AGG | + | chr6_4:18267868-18267887 | None:intergenic | 45.0% | |
CTCAATCTGTGCACAGGAAA+AGG | - | chr6_4:18267868-18267887 | Msa0980270:intron | 45.0% | |
TTGTCATGCAGTTATGCGCT+TGG | - | chr6_4:18268334-18268353 | Msa0980270:intron | 45.0% | |
CATGAAACGTAACTGGATGC+AGG | - | chr6_4:18268851-18268870 | Msa0980270:CDS | 45.0% | |
!! | TGGATGCAGGTAAGTTGATG+TGG | - | chr6_4:18268864-18268883 | Msa0980270:CDS | 45.0% |
TGTTCGAAAAACAGACAGGG+AGG | - | chr6_4:18268958-18268977 | Msa0980270:intron | 45.0% | |
TACATGGCTGCTCTTGCAAA+TGG | - | chr6_4:18269011-18269030 | Msa0980270:CDS | 45.0% | |
ACAGTGAGTAAGTGAGGGAA+AGG | - | chr6_4:18269214-18269233 | Msa0980270:intron | 45.0% | |
TACAGAGAAATGGGGGAACA+AGG | + | chr6_4:18269789-18269808 | None:intergenic | 45.0% | |
GACTGATATCCCAACTAGGT+TGG | + | chr6_4:18269872-18269891 | None:intergenic | 45.0% | |
TAGCGACTGATATCCCAACT+AGG | + | chr6_4:18269876-18269895 | None:intergenic | 45.0% | |
! | GTCGCTAGCTTGATGTGTTA+AGG | - | chr6_4:18269889-18269908 | Msa0980270:intron | 45.0% |
GTGGCCCTAATAGCAAAACT+AGG | + | chr6_4:18270025-18270044 | None:intergenic | 45.0% | |
AATTGGAATAGCGGCCAATG+TGG | + | chr6_4:18270044-18270063 | None:intergenic | 45.0% | |
GTGAAGCAACATTGACCAAG+CGG | - | chr6_4:18270470-18270489 | Msa0980270:intron | 45.0% | |
CAGCTTGACGGTATGTTTCT+CGG | - | chr6_4:18270522-18270541 | Msa0980270:intron | 45.0% | |
GAGAAAAGGGAACATGCACA+CGG | - | chr6_4:18270762-18270781 | Msa0980270:intron | 45.0% | |
GTTTAATGGGGATCCATCGT+CGG | + | chr6_4:18270926-18270945 | None:intergenic | 45.0% | |
CTGAGTATGTGTTAGCTGCT+AGG | - | chr6_4:18271101-18271120 | Msa0980270:intron | 45.0% | |
CAAATGCATTTCAGAGGAGG+AGG | - | chr6_4:18271252-18271271 | Msa0980270:intron | 45.0% | |
ACCCTTGTGTTCACACCTTA+GGG | + | chr6_4:18271377-18271396 | None:intergenic | 45.0% | |
TACCCTTGTGTTCACACCTT+AGG | + | chr6_4:18271378-18271397 | None:intergenic | 45.0% | |
AAGGTGTGAACACAAGGGTA+TGG | - | chr6_4:18271378-18271397 | Msa0980270:intron | 45.0% | |
CACAATCCAAGTGCAAAGAG+GGG | + | chr6_4:18271415-18271434 | None:intergenic | 45.0% | |
GCACAATCCAAGTGCAAAGA+GGG | + | chr6_4:18271416-18271435 | None:intergenic | 45.0% | |
!! | GATAAACTCTCTGGTGGACT+TGG | - | chr6_4:18271542-18271561 | Msa0980270:intron | 45.0% |
TCATACGACACCAACACATG+TGG | - | chr6_4:18271942-18271961 | Msa0980270:intron | 45.0% | |
CAACACTGACACGGAAACAA+TGG | + | chr6_4:18272009-18272028 | None:intergenic | 45.0% | |
ATGCAGCATCAACACTGACA+CGG | + | chr6_4:18272018-18272037 | None:intergenic | 45.0% | |
TCCATTATTCTCACTCTGGG+GGG | + | chr6_4:18272160-18272179 | None:intergenic | 45.0% | |
GTCCATTATTCTCACTCTGG+GGG | + | chr6_4:18272161-18272180 | None:intergenic | 45.0% | |
GAGTATGTGGCCACTAAAGA+TGG | - | chr6_4:18272504-18272523 | Msa0980270:intron | 45.0% | |
GCACCAAGCCTAATAGTGTT+GGG | + | chr6_4:18273006-18273025 | None:intergenic | 45.0% | |
! | GTGTTCCTTTTCCAAGTAGC+TGG | - | chr6_4:18273163-18273182 | Msa0980270:CDS | 45.0% |
GGAAAGATGAGCATGAATGC+AGG | + | chr6_4:18273466-18273485 | None:intergenic | 45.0% | |
GCTTGTATTGTGTCTTACCC+TGG | - | chr6_4:18273878-18273897 | Msa0980270:intron | 45.0% | |
AGCTGAAAGGAGAAGACTAG+AGG | - | chr6_4:18274006-18274025 | Msa0980270:intron | 45.0% | |
TGAAAGGAGAAGACTAGAGG+AGG | - | chr6_4:18274009-18274028 | Msa0980270:intron | 45.0% | |
!!! | TTGGAATCATTTTTCGGGGG+AGG | - | chr6_4:18274121-18274140 | Msa0980270:intron | 45.0% |
! | GTGTTTTACCCTTTACCGTG+CGG | - | chr6_4:18274188-18274207 | Msa0980270:intron | 45.0% |
TACTACTCGATGTGGGACTT+TGG | - | chr6_4:18274346-18274365 | Msa0980270:intron | 45.0% | |
CATATGTGAGATTACGGTGC+AGG | + | chr6_4:18274842-18274861 | None:intergenic | 45.0% | |
TCTTGCCTTCTAGTGTGTGA+GGG | - | chr6_4:18274955-18274974 | Msa0980270:CDS | 45.0% | |
GGGGAAGATTGGAATGGATA+AGG | + | chr6_4:18275029-18275048 | None:intergenic | 45.0% | |
AACGAGCTGAAGAGGAAAGA+AGG | - | chr6_4:18275362-18275381 | Msa0980270:intron | 45.0% | |
AGCTGAAGAGGAAAGAAGGT+TGG | - | chr6_4:18275366-18275385 | Msa0980270:intron | 45.0% | |
GCTGAAGAGGAAAGAAGGTT+GGG | - | chr6_4:18275367-18275386 | Msa0980270:intron | 45.0% | |
! | GGGTTTTCCTACAAAAGAGC+AGG | + | chr6_4:18275502-18275521 | None:intergenic | 45.0% |
CTTGTAGAAATGGCCATGCA+AGG | + | chr6_4:18276001-18276020 | None:intergenic | 45.0% | |
GGAACCAGTCAACGAATTTC+CGG | - | chr6_4:18276474-18276493 | Msa0980270:intron | 45.0% | |
ACATATGACTACGAGGAAGC+CGG | - | chr6_4:18276556-18276575 | Msa0980270:intron | 45.0% | |
! | TTGACAATCTTTGGTTCCCC+TGG | + | chr6_4:18276689-18276708 | None:intergenic | 45.0% |
!! | TTAATTAATTAACATAAAAA+TGG | - | chr6_4:18264624-18264643 | Msa0980270:three_prime_UTR | 5.0% |
!! | ATAAAAATAAATAAAATAAG+AGG | + | chr6_4:18264716-18264735 | None:intergenic | 5.0% |
!!! | ATTTTTTTTTGTTTAATTAT+TGG | - | chr6_4:18264843-18264862 | Msa0980270:CDS | 5.0% |
!!! | TTTTATATTTTGTTAAATAT+AGG | - | chr6_4:18265723-18265742 | Msa0980270:intron | 5.0% |
!! | ATTATTAAATTTATAAGTAT+TGG | + | chr6_4:18267332-18267351 | None:intergenic | 5.0% |
!!! | TTTTGTAAATAAATTATTTA+TGG | + | chr6_4:18270735-18270754 | None:intergenic | 5.0% |
!! | TAAAAATAATGATAAATATT+TGG | + | chr6_4:18273487-18273506 | None:intergenic | 5.0% |
! | GCAGCGCCTTTCTGAAAAGT+TGG | + | chr6_4:18265171-18265190 | None:intergenic | 50.0% |
!!! | ACTTTTCAGAAAGGCGCTGC+TGG | - | chr6_4:18265171-18265190 | Msa0980270:intron | 50.0% |
TGTGCATGGGACTTGAACTC+AGG | - | chr6_4:18265684-18265703 | Msa0980270:intron | 50.0% | |
! | CCAAACCCTTCCTTTTTGCG+AGG | + | chr6_4:18266171-18266190 | None:intergenic | 50.0% |
CCTCGCAAAAAGGAAGGGTT+TGG | - | chr6_4:18266168-18266187 | Msa0980270:intron | 50.0% | |
!! | GCACACTGGCTTCTCTTTAG+AGG | - | chr6_4:18266207-18266226 | Msa0980270:intron | 50.0% |
! | AAATGGCCGACTCACGTCAA+AGG | - | chr6_4:18266424-18266443 | Msa0980270:intron | 50.0% |
CGTCAAAGGACTACAGAGAG+AGG | - | chr6_4:18266438-18266457 | Msa0980270:intron | 50.0% | |
GATTAGACGTGTCCCGCTAT+CGG | - | chr6_4:18266672-18266691 | Msa0980270:intron | 50.0% | |
ACACGACATGTGTCCGATAG+CGG | + | chr6_4:18266688-18266707 | None:intergenic | 50.0% | |
ATGGATACAGACACGGACAC+CGG | + | chr6_4:18266801-18266820 | None:intergenic | 50.0% | |
TGTCCTCTCAATCTGTGCAC+AGG | - | chr6_4:18267862-18267881 | Msa0980270:intron | 50.0% | |
AGGAAACCTAGCGGAGTATG+CGG | - | chr6_4:18268978-18268997 | Msa0980270:intron | 50.0% | |
!! | ATGCGGTGCTGCGTTATACA+TGG | - | chr6_4:18268995-18269014 | Msa0980270:CDS | 50.0% |
GTCTCGCAAAGGATGAGTTG+TGG | - | chr6_4:18269838-18269857 | Msa0980270:intron | 50.0% | |
CAAAGGATGAGTTGTGGCTG+AGG | - | chr6_4:18269844-18269863 | Msa0980270:intron | 50.0% | |
! | CCGCCTAGTTCACCCTTTTT+GGG | + | chr6_4:18270130-18270149 | None:intergenic | 50.0% |
CCCAAAAAGGGTGAACTAGG+CGG | - | chr6_4:18270127-18270146 | Msa0980270:CDS | 50.0% | |
! | ACCGCCTAGTTCACCCTTTT+TGG | + | chr6_4:18270131-18270150 | None:intergenic | 50.0% |
TAGGCGGTCGAGACAGAAAT+TGG | - | chr6_4:18270143-18270162 | Msa0980270:CDS | 50.0% | |
AGGCGGTCGAGACAGAAATT+GGG | - | chr6_4:18270144-18270163 | Msa0980270:CDS | 50.0% | |
CTCATACTCTATCAGCCGCT+TGG | + | chr6_4:18270488-18270507 | None:intergenic | 50.0% | |
CACAGAGTCTTCCAGCTTGA+CGG | - | chr6_4:18270510-18270529 | Msa0980270:intron | 50.0% | |
CGAGAAACATACCGTCAAGC+TGG | + | chr6_4:18270524-18270543 | None:intergenic | 50.0% | |
ATGCATTTCAGAGGAGGAGG+AGG | - | chr6_4:18271255-18271274 | Msa0980270:intron | 50.0% | |
AGAAGAAGAAGGACCCCCTA+AGG | - | chr6_4:18271359-18271378 | Msa0980270:intron | 50.0% | |
CCTTGTGTTCACACCTTAGG+GGG | + | chr6_4:18271375-18271394 | None:intergenic | 50.0% | |
CCCTTGTGTTCACACCTTAG+GGG | + | chr6_4:18271376-18271395 | None:intergenic | 50.0% | |
CCCCTAAGGTGTGAACACAA+GGG | - | chr6_4:18271373-18271392 | Msa0980270:intron | 50.0% | |
!! | AGTGCAAAGAGGGGTATTGG+AGG | + | chr6_4:18271406-18271425 | None:intergenic | 50.0% |
! | CCAAGTGCAAAGAGGGGTAT+TGG | + | chr6_4:18271409-18271428 | None:intergenic | 50.0% |
CCAATACCCCTCTTTGCACT+TGG | - | chr6_4:18271406-18271425 | Msa0980270:intron | 50.0% | |
CGCACAATCCAAGTGCAAAG+AGG | + | chr6_4:18271417-18271436 | None:intergenic | 50.0% | |
!! | AAACTCTCTGGTGGACTTGG+TGG | - | chr6_4:18271545-18271564 | Msa0980270:intron | 50.0% |
TTCTATCCTTCTCAGCACGC+TGG | + | chr6_4:18271592-18271611 | None:intergenic | 50.0% | |
GCGTGCTGAGAAGGATAGAA+TGG | - | chr6_4:18271592-18271611 | Msa0980270:intron | 50.0% | |
ACACCGACATGTTACTGCCA+AGG | - | chr6_4:18272093-18272112 | Msa0980270:intron | 50.0% | |
! | GCAGAGGATGAGTTGACAAG+AGG | + | chr6_4:18272130-18272149 | None:intergenic | 50.0% |
ACCCCCCAGAGTGAGAATAA+TGG | - | chr6_4:18272156-18272175 | Msa0980270:intron | 50.0% | |
! | TAATAGTGTTGGGCGTGAGG+GGG | + | chr6_4:18272996-18273015 | None:intergenic | 50.0% |
! | CTAATAGTGTTGGGCGTGAG+GGG | + | chr6_4:18272997-18273016 | None:intergenic | 50.0% |
! | CCTAATAGTGTTGGGCGTGA+GGG | + | chr6_4:18272998-18273017 | None:intergenic | 50.0% |
ACGCCCAACACTATTAGGCT+TGG | - | chr6_4:18273000-18273019 | Msa0980270:CDS | 50.0% | |
CGCACCAAGCCTAATAGTGT+TGG | + | chr6_4:18273007-18273026 | None:intergenic | 50.0% | |
ATAGGCTCCGATACCGCATT+AGG | - | chr6_4:18273059-18273078 | Msa0980270:intron | 50.0% | |
TGATGGCTACCTTCACAACG+AGG | - | chr6_4:18273712-18273731 | Msa0980270:CDS | 50.0% | |
GTGTTTCCTCCTCGTTGTGA+AGG | + | chr6_4:18273724-18273743 | None:intergenic | 50.0% | |
GCATGTTCCCACTTCAGAGT+TGG | + | chr6_4:18273860-18273879 | None:intergenic | 50.0% | |
AGCGTGCAGCAAGAGAACTT+AGG | - | chr6_4:18274056-18274075 | Msa0980270:intron | 50.0% | |
GCGTGCAGCAAGAGAACTTA+GGG | - | chr6_4:18274057-18274076 | Msa0980270:intron | 50.0% | |
CGTGCAGCAAGAGAACTTAG+GGG | - | chr6_4:18274058-18274077 | Msa0980270:intron | 50.0% | |
TTTCCGATCAGCCCTTCAGT+CGG | - | chr6_4:18274458-18274477 | Msa0980270:intron | 50.0% | |
! | TTACCGACTGAAGGGCTGAT+CGG | + | chr6_4:18274464-18274483 | None:intergenic | 50.0% |
TACGAAGCTGCGGATCTAAC+AGG | + | chr6_4:18274866-18274885 | None:intergenic | 50.0% | |
ATCAGCACATGAATCCGGGA+TGG | + | chr6_4:18274920-18274939 | None:intergenic | 50.0% | |
GTCTTGCCTTCTAGTGTGTG+AGG | - | chr6_4:18274954-18274973 | Msa0980270:CDS | 50.0% | |
AAAGGCCCTCACACACTAGA+AGG | + | chr6_4:18274963-18274982 | None:intergenic | 50.0% | |
GGACAAGGGGAAGATTGGAA+TGG | + | chr6_4:18275035-18275054 | None:intergenic | 50.0% | |
TCCAATCTTCCCCTTGTCCA+TGG | - | chr6_4:18275036-18275055 | Msa0980270:intron | 50.0% | |
CCAATCTTCCCCTTGTCCAT+GGG | - | chr6_4:18275037-18275056 | Msa0980270:intron | 50.0% | |
CAAACAGTCCCATGGACAAG+GGG | + | chr6_4:18275048-18275067 | None:intergenic | 50.0% | |
CCAAACAGTCCCATGGACAA+GGG | + | chr6_4:18275049-18275068 | None:intergenic | 50.0% | |
TGAACAGCCAAACAGTCCCA+TGG | + | chr6_4:18275056-18275075 | None:intergenic | 50.0% | |
TTGGCTGTTCACACCCTTTC+TGG | - | chr6_4:18275065-18275084 | Msa0980270:intron | 50.0% | |
CACGGTGGATAAGCCAGAAA+GGG | + | chr6_4:18275081-18275100 | None:intergenic | 50.0% | |
! | GACGAAACAGTTTTGCACGG+TGG | + | chr6_4:18275096-18275115 | None:intergenic | 50.0% |
GAGGAAACAACGAGCTGAAG+AGG | - | chr6_4:18275354-18275373 | Msa0980270:intron | 50.0% | |
TCCTGCTCAATCTGCTGTAG+AGG | - | chr6_4:18275390-18275409 | Msa0980270:intron | 50.0% | |
TCAGCCGGAAATTCGTTGAC+TGG | + | chr6_4:18276481-18276500 | None:intergenic | 50.0% | |
! | GAGGAAGCCGGTGGTTTTTA+TGG | - | chr6_4:18276568-18276587 | Msa0980270:intron | 50.0% |
AAACATGGTTGGCAGCACCA+GGG | - | chr6_4:18276669-18276688 | Msa0980270:intron | 50.0% | |
!! | CGGCAGTTTTGGTACACTGC+CGG | - | chr6_4:18264471-18264490 | Msa0980270:three_prime_UTR | 55.0% |
CACGACATGTGTCCGATAGC+GGG | + | chr6_4:18266687-18266706 | None:intergenic | 55.0% | |
TGTTCGTGTCGTGTCGTGTC+CGG | - | chr6_4:18266779-18266798 | Msa0980270:intron | 55.0% | |
CAGACAGGGAGGAAACCTAG+CGG | - | chr6_4:18268969-18268988 | Msa0980270:intron | 55.0% | |
GCATTGGAGCTGTCTCGCAA+AGG | - | chr6_4:18269827-18269846 | Msa0980270:CDS | 55.0% | |
! | GCTGAGGTGCCAACCTAGTT+GGG | - | chr6_4:18269860-18269879 | Msa0980270:intron | 55.0% |
CATTTCAGAGGAGGAGGAGG+AGG | - | chr6_4:18271258-18271277 | Msa0980270:intron | 55.0% | |
GAGGAGGAGGAGGAAGAGAA+GGG | - | chr6_4:18271298-18271317 | Msa0980270:intron | 55.0% | |
AGGAGGAGGAGGAAGAGAAG+GGG | - | chr6_4:18271299-18271318 | Msa0980270:intron | 55.0% | |
CCCCCTAAGGTGTGAACACA+AGG | - | chr6_4:18271372-18271391 | Msa0980270:intron | 55.0% | |
!! | TGGTGGACTTGGTGGTGGTT+TGG | - | chr6_4:18271553-18271572 | Msa0980270:intron | 55.0% |
TTCTCAGCACGCTGGAATGC+AGG | + | chr6_4:18271584-18271603 | None:intergenic | 55.0% | |
TGCATTCCAGCGTGCTGAGA+AGG | - | chr6_4:18271583-18271602 | Msa0980270:intron | 55.0% | |
! | GCTTTCAGGGGGAGAGTATG+TGG | - | chr6_4:18272491-18272510 | Msa0980270:intron | 55.0% |
CCCTCACGCCCAACACTATT+AGG | - | chr6_4:18272995-18273014 | Msa0980270:CDS | 55.0% | |
! | GCCTAATAGTGTTGGGCGTG+AGG | + | chr6_4:18272999-18273018 | None:intergenic | 55.0% |
! | GGTATCGGAGCCTATCGATC+AGG | + | chr6_4:18273054-18273073 | None:intergenic | 55.0% |
TGGCTACCTTCACAACGAGG+AGG | - | chr6_4:18273715-18273734 | Msa0980270:CDS | 55.0% | |
TCTCCTTTCAGCTGCTGCAG+CGG | + | chr6_4:18273999-18274018 | None:intergenic | 55.0% | |
TCTTGCTGCACGCTCTTCAG+GGG | + | chr6_4:18274050-18274069 | None:intergenic | 55.0% | |
CTCTTGCTGCACGCTCTTCA+GGG | + | chr6_4:18274051-18274070 | None:intergenic | 55.0% | |
TCTCTTGCTGCACGCTCTTC+AGG | + | chr6_4:18274052-18274071 | None:intergenic | 55.0% | |
GACTGAAGGGCTGATCGGAA+AGG | + | chr6_4:18274459-18274478 | None:intergenic | 55.0% | |
TGGCAGATGGTTCTCCATCC+CGG | - | chr6_4:18274903-18274922 | Msa0980270:intron | 55.0% | |
CCCATGGACAAGGGGAAGAT+TGG | + | chr6_4:18275040-18275059 | None:intergenic | 55.0% | |
CCCTTGTCCATGGGACTGTT+TGG | - | chr6_4:18275046-18275065 | Msa0980270:intron | 55.0% | |
GCCAAACAGTCCCATGGACA+AGG | + | chr6_4:18275050-18275069 | None:intergenic | 55.0% | |
GCACGGTGGATAAGCCAGAA+AGG | + | chr6_4:18275082-18275101 | None:intergenic | 55.0% | |
GCCTCTACAGCAGATTGAGC+AGG | + | chr6_4:18275394-18275413 | None:intergenic | 55.0% | |
TATGACTACGAGGAAGCCGG+TGG | - | chr6_4:18276559-18276578 | Msa0980270:intron | 55.0% | |
CAAACATGGTTGGCAGCACC+AGG | - | chr6_4:18276668-18276687 | Msa0980270:intron | 55.0% | |
AACATGGTTGGCAGCACCAG+GGG | - | chr6_4:18276670-18276689 | Msa0980270:intron | 55.0% | |
!! | TCAGAAAGGCGCTGCTGGAC+AGG | - | chr6_4:18265176-18265195 | Msa0980270:intron | 60.0% |
! | AGGCGCTGCTGGACAGGTAA+TGG | - | chr6_4:18265182-18265201 | Msa0980270:intron | 60.0% |
AGCGGGACACGTCTAATCCG+AGG | + | chr6_4:18266670-18266689 | None:intergenic | 60.0% | |
! | GGCTGAGGTGCCAACCTAGT+TGG | - | chr6_4:18269859-18269878 | Msa0980270:intron | 60.0% |
TTCAGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271261-18271280 | Msa0980270:intron | 60.0% | |
GGAGGAGGAGGAGGAAGAGA+AGG | - | chr6_4:18271297-18271316 | Msa0980270:intron | 60.0% | |
GGAGGAGGAGGAAGAGAAGG+GGG | - | chr6_4:18271300-18271319 | Msa0980270:intron | 60.0% | |
GAGGAAGAGAAGGGGGAGGA+GGG | - | chr6_4:18271307-18271326 | Msa0980270:intron | 60.0% | |
AGGAAGAGAAGGGGGAGGAG+GGG | - | chr6_4:18271308-18271327 | Msa0980270:intron | 60.0% | |
!! | CTCTCTGGTGGACTTGGTGG+TGG | - | chr6_4:18271548-18271567 | Msa0980270:intron | 60.0% |
TCAGCACGCTGGAATGCAGG+AGG | + | chr6_4:18271581-18271600 | None:intergenic | 60.0% | |
!! | TCTGGGGGGTGTTCTTGCAG+AGG | + | chr6_4:18272146-18272165 | None:intergenic | 60.0% |
! | TGGTGGGTGGCCTGATCGAT+AGG | - | chr6_4:18273041-18273060 | Msa0980270:intron | 60.0% |
AAGCCGCTGCAGCAGCTGAA+AGG | - | chr6_4:18273993-18274012 | Msa0980270:intron | 60.0% | |
GGGAGCTGTTGCTGCAGATG+TGG | - | chr6_4:18274078-18274097 | Msa0980270:intron | 60.0% | |
AGTGCACGCCGCACGGTAAA+GGG | + | chr6_4:18274199-18274218 | None:intergenic | 60.0% | |
CAGATACAGTGCACGCCGCA+CGG | + | chr6_4:18274206-18274225 | None:intergenic | 60.0% | |
GCAGCACCGCATACTCCGCT+AGG | + | chr6_4:18268987-18269006 | None:intergenic | 65.0% | |
AGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271264-18271283 | Msa0980270:intron | 65.0% | |
GGAGGAGGAAGAGAAGGGGG+AGG | - | chr6_4:18271303-18271322 | Msa0980270:intron | 65.0% | |
GGAGGAAGAGAAGGGGGAGG+AGG | - | chr6_4:18271306-18271325 | Msa0980270:intron | 65.0% | |
GGAAGAGAAGGGGGAGGAGG+GGG | - | chr6_4:18271309-18271328 | Msa0980270:intron | 65.0% | |
! | TGGGCGTGAGGGGGTGCATT+GGG | + | chr6_4:18272987-18273006 | None:intergenic | 65.0% |
! | TTGGGCGTGAGGGGGTGCAT+TGG | + | chr6_4:18272988-18273007 | None:intergenic | 65.0% |
CAGTGCACGCCGCACGGTAA+AGG | + | chr6_4:18274200-18274219 | None:intergenic | 65.0% | |
GTAGAGACAGTGCAGCCGCC+AGG | + | chr6_4:18274422-18274441 | None:intergenic | 65.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GGAGGAGGAGGAGGAGGAGG+AGG | - | chr6_4:18271267-18271286 | Msa0980270:intron | 70.0% | |
GCACCCGAGAGCCAACGTCC+TGG | - | chr6_4:18274401-18274420 | Msa0980270:intron | 70.0% | |
!! | CCGCCAGGACGTTGGCTCTC+GGG | + | chr6_4:18274407-18274426 | None:intergenic | 70.0% |
CCCGAGAGCCAACGTCCTGG+CGG | - | chr6_4:18274404-18274423 | Msa0980270:intron | 70.0% | |
!! | GCCGCCAGGACGTTGGCTCT+CGG | + | chr6_4:18274408-18274427 | None:intergenic | 70.0% |
CAGTGCAGCCGCCAGGACGT+TGG | + | chr6_4:18274415-18274434 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr6_4 | gene | 18264452 | 18276943 | 18264452 | ID=Msa0980270;Name=Msa0980270 |
chr6_4 | mRNA | 18264452 | 18276943 | 18264452 | ID=Msa0980270-mRNA-1;Parent=Msa0980270;Name=Msa0980270-mRNA-1;_AED=0.17;_eAED=0.17;_QI=191|0.94|0.89|1|1|1|19|346|657 |
chr6_4 | exon | 18264452 | 18264974 | 18264452 | ID=Msa0980270-mRNA-1:exon:5672;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18265636 | 18265689 | 18265636 | ID=Msa0980270-mRNA-1:exon:5671;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18265957 | 18266046 | 18265957 | ID=Msa0980270-mRNA-1:exon:5670;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18267281 | 18267481 | 18267281 | ID=Msa0980270-mRNA-1:exon:5669;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18267605 | 18267685 | 18267605 | ID=Msa0980270-mRNA-1:exon:5668;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18268781 | 18268896 | 18268781 | ID=Msa0980270-mRNA-1:exon:5667;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18268983 | 18269052 | 18268983 | ID=Msa0980270-mRNA-1:exon:5666;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18269740 | 18269856 | 18269740 | ID=Msa0980270-mRNA-1:exon:5665;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18269942 | 18270214 | 18269942 | ID=Msa0980270-mRNA-1:exon:5664;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18270864 | 18270944 | 18270864 | ID=Msa0980270-mRNA-1:exon:5663;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18272337 | 18272423 | 18272337 | ID=Msa0980270-mRNA-1:exon:5662;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18272523 | 18272602 | 18272523 | ID=Msa0980270-mRNA-1:exon:5661;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18272938 | 18273050 | 18272938 | ID=Msa0980270-mRNA-1:exon:5660;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18273129 | 18273185 | 18273129 | ID=Msa0980270-mRNA-1:exon:5659;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18273707 | 18273783 | 18273707 | ID=Msa0980270-mRNA-1:exon:5658;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18273893 | 18273975 | 18273893 | ID=Msa0980270-mRNA-1:exon:5657;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18274936 | 18275008 | 18274936 | ID=Msa0980270-mRNA-1:exon:5656;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18276198 | 18276279 | 18276198 | ID=Msa0980270-mRNA-1:exon:5655;Parent=Msa0980270-mRNA-1 |
chr6_4 | exon | 18276691 | 18276943 | 18276691 | ID=Msa0980270-mRNA-1:exon:5654;Parent=Msa0980270-mRNA-1 |
chr6_4 | five_prime_UTR | 18276753 | 18276943 | 18276753 | ID=Msa0980270-mRNA-1:five_prime_utr;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18276691 | 18276752 | 18276691 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18276198 | 18276279 | 18276198 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18274936 | 18275008 | 18274936 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18273893 | 18273975 | 18273893 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18273707 | 18273783 | 18273707 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18273129 | 18273185 | 18273129 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18272938 | 18273050 | 18272938 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18272523 | 18272602 | 18272523 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18272337 | 18272423 | 18272337 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18270864 | 18270944 | 18270864 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18269942 | 18270214 | 18269942 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18269740 | 18269856 | 18269740 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18268983 | 18269052 | 18268983 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18268781 | 18268896 | 18268781 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18267605 | 18267685 | 18267605 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18267281 | 18267481 | 18267281 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18265957 | 18266046 | 18265957 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18265636 | 18265689 | 18265636 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | CDS | 18264798 | 18264974 | 18264798 | ID=Msa0980270-mRNA-1:cds;Parent=Msa0980270-mRNA-1 |
chr6_4 | three_prime_UTR | 18264452 | 18264797 | 18264452 | ID=Msa0980270-mRNA-1:three_prime_utr;Parent=Msa0980270-mRNA-1 |
Gene Sequence |
Protein sequence |