Alfalfa Gene Editing Database
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1123830 | XP_003625506.1 | 97.810 | 959 | 21 | 0 | 1 | 959 | 1 | 959 | 0.0 | 1911 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1123830 | sp|Q9LD55|EIF3A_ARATH | 69.411 | 984 | 272 | 5 | 1 | 956 | 1 | 983 | 0.0 | 1275 |
Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1123830 | G7L0K9 | 97.810 | 959 | 21 | 0 | 1 | 959 | 1 | 959 | 0.0 | 1911 |
Gene ID | Type | Classification |
---|
Gene ID | Type | Classification |
---|
Co-expression Network
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
Msa0007850 | Msa1123830 | 0.814219 | 1.722441e-51 | -8.615850e-47 |
Msa0024110 | Msa1123830 | 0.839493 | 1.533681e-57 | -8.615850e-47 |
Msa0038000 | Msa1123830 | 0.834551 | 2.806890e-56 | -8.615850e-47 |
Msa0038440 | Msa1123830 | 0.820325 | 7.282288e-53 | -8.615850e-47 |
Msa0045730 | Msa1123830 | 0.844708 | 6.396233e-59 | -8.615850e-47 |
Msa0046830 | Msa1123830 | 0.837339 | 5.511607e-57 | -8.615850e-47 |
Msa0047160 | Msa1123830 | 0.807596 | 4.680037e-50 | -8.615850e-47 |
Msa0056270 | Msa1123830 | 0.807273 | 5.478961e-50 | -8.615850e-47 |
Msa0093850 | Msa1123830 | 0.803750 | 3.003136e-49 | -8.615850e-47 |
Msa0097950 | Msa1123830 | 0.808638 | 2.806918e-50 | -8.615850e-47 |
Msa0116130 | Msa1123830 | 0.809619 | 1.729985e-50 | -8.615850e-47 |
Msa0118710 | Msa1123830 | 0.822090 | 2.852333e-53 | -8.615850e-47 |
Msa0119900 | Msa1123830 | 0.817758 | 2.793138e-52 | -8.615850e-47 |
Msa0618930 | Msa1123830 | 0.807367 | 5.233060e-50 | -8.615850e-47 |
Msa0618950 | Msa1123830 | 0.803900 | 2.795410e-49 | -8.615850e-47 |
Msa0619860 | Msa1123830 | 0.825723 | 4.013132e-54 | -8.615850e-47 |
Msa0622750 | Msa1123830 | 0.800278 | 1.553598e-48 | -8.615850e-47 |
Msa0623200 | Msa1123830 | 0.838645 | 2.543271e-57 | -8.615850e-47 |
Msa0633570 | Msa1123830 | 0.806216 | 9.160661e-50 | -8.615850e-47 |
Msa0634890 | Msa1123830 | 0.833263 | 5.896442e-56 | -8.615850e-47 |
Msa0666230 | Msa1123830 | 0.808453 | 3.074374e-50 | -8.615850e-47 |
Msa0702700 | Msa1123830 | 0.804780 | 1.832513e-49 | -8.615850e-47 |
Msa0706500 | Msa1123830 | 0.816045 | 6.770080e-52 | -8.615850e-47 |
Msa0729200 | Msa1123830 | 0.801193 | 1.010411e-48 | -8.615850e-47 |
Msa0744100 | Msa1123830 | 0.836535 | 8.840004e-57 | -8.615850e-47 |
Msa0769590 | Msa1123830 | 0.804460 | 2.136966e-49 | -8.615850e-47 |
Msa0785130 | Msa1123830 | 0.820226 | 7.669794e-53 | -8.615850e-47 |
Msa0806880 | Msa1123830 | 0.803129 | 4.038816e-49 | -8.615850e-47 |
Msa0819060 | Msa1123830 | 0.817584 | 3.057668e-52 | -8.615850e-47 |
Msa0825270 | Msa1123830 | 0.842520 | 2.459482e-58 | -8.615850e-47 |
Msa0834260 | Msa1123830 | 0.815429 | 9.286777e-52 | -8.615850e-47 |
Msa0123510 | Msa1123830 | 0.802193 | 6.299708e-49 | -8.615850e-47 |
Msa0127850 | Msa1123830 | 0.812246 | 4.668127e-51 | -8.615850e-47 |
Msa0131590 | Msa1123830 | 0.809896 | 1.508209e-50 | -8.615850e-47 |
Msa0132830 | Msa1123830 | 0.810303 | 1.232561e-50 | -8.615850e-47 |
Msa0202490 | Msa1123830 | 0.838609 | 2.597175e-57 | -8.615850e-47 |
Msa0221030 | Msa1123830 | 0.803165 | 3.971532e-49 | -8.615850e-47 |
Msa0230890 | Msa1123830 | 0.802663 | 5.041121e-49 | -8.615850e-47 |
Msa0423750 | Msa1123830 | 0.818565 | 1.834265e-52 | -8.615850e-47 |
Msa0443390 | Msa1123830 | 0.816225 | 6.170974e-52 | -8.615850e-47 |
Msa0980270 | Msa1123830 | 0.830129 | 3.493249e-55 | -8.615850e-47 |
Msa0997430 | Msa1123830 | 0.807993 | 3.852260e-50 | -8.615850e-47 |
Msa1019240 | Msa1123830 | 0.804381 | 2.219907e-49 | -8.615850e-47 |
Msa1039520 | Msa1123830 | 0.810122 | 1.348690e-50 | -8.615850e-47 |
Msa1042780 | Msa1123830 | 0.838935 | 2.139232e-57 | -8.615850e-47 |
Msa1070390 | Msa1123830 | 0.807246 | 5.550121e-50 | -8.615850e-47 |
Msa1072710 | Msa1123830 | 0.802978 | 4.340163e-49 | -8.615850e-47 |
Msa0245580 | Msa1123830 | 0.831152 | 1.962519e-55 | -8.615850e-47 |
Msa0270210 | Msa1123830 | 0.819268 | 1.269808e-52 | -8.615850e-47 |
Msa0284180 | Msa1123830 | 0.839096 | 1.944194e-57 | -8.615850e-47 |
Msa0300350 | Msa1123830 | 0.811768 | 5.935291e-51 | -8.615850e-47 |
Msa0327300 | Msa1123830 | 0.808390 | 3.170964e-50 | -8.615850e-47 |
Msa0327330 | Msa1123830 | 0.812042 | 5.171823e-51 | -8.615850e-47 |
Msa0341690 | Msa1123830 | 0.813194 | 2.896383e-51 | -8.615850e-47 |
Msa0348830 | Msa1123830 | 0.820277 | 7.468594e-53 | -8.615850e-47 |
Msa0359600 | Msa1123830 | 0.816777 | 4.643284e-52 | -8.615850e-47 |
Msa1123830 | Msa1127590 | 0.802797 | 4.731213e-49 | -8.615850e-47 |
Msa1123830 | Msa1145240 | 0.806238 | 9.066034e-50 | -8.615850e-47 |
Msa1123830 | Msa1165780 | 0.810152 | 1.328611e-50 | -8.615850e-47 |
Msa1123830 | Msa1195300 | 0.806076 | 9.802955e-50 | -8.615850e-47 |
Msa1123830 | Msa1208020 | 0.862447 | 5.034049e-64 | -8.615850e-47 |
Msa1123830 | Msa1209200 | 0.820162 | 7.936011e-53 | -8.615850e-47 |
Msa1123830 | Msa1235460 | 0.822190 | 2.704759e-53 | -8.615850e-47 |
Msa1123830 | Msa1262890 | 0.803967 | 2.707524e-49 | -8.615850e-47 |
Msa1123830 | Msa1265630 | 0.810380 | 1.186386e-50 | -8.615850e-47 |
Msa1123830 | Msa1266060 | 0.809765 | 1.609308e-50 | -8.615850e-47 |
Msa1123830 | Msa1331250 | 0.828594 | 8.244580e-55 | -8.615850e-47 |
Msa1123830 | Msa1369190 | 0.833466 | 5.248549e-56 | -8.615850e-47 |
Msa1123830 | Msa1385810 | 0.852050 | 5.951000e-61 | -8.615850e-47 |
Msa1123830 | Msa1396870 | 0.808955 | 2.400872e-50 | -8.615850e-47 |
Msa1123830 | Msa1403570 | 0.808283 | 3.342096e-50 | -8.615850e-47 |
Msa1123830 | Msa1409260 | 0.852768 | 3.716166e-61 | -8.615850e-47 |
Msa1123830 | Msa1410440 | 0.810424 | 1.160690e-50 | -8.615850e-47 |
Msa1123830 | Msa1411950 | 0.807204 | 5.667272e-50 | -8.615850e-47 |
Msa1123830 | Msa1413500 | 0.801000 | 1.107026e-48 | -8.615850e-47 |
Msa1123830 | Msa1432480 | 0.806466 | 8.116524e-50 | -8.615850e-47 |
Msa1123830 | Msa1435770 | 0.827807 | 1.275702e-54 | -8.615850e-47 |
Msa1123830 | Msa1437860 | 0.930157 | 2.464250e-93 | -8.615850e-47 |
Msa1123830 | Msa1456050 | 0.812961 | 3.258068e-51 | -8.615850e-47 |
Msa0534750 | Msa1123830 | 0.818530 | 1.868352e-52 | -8.615850e-47 |
Msa0581280 | Msa1123830 | 0.825796 | 3.855733e-54 | -8.615850e-47 |
Msa0593700 | Msa1123830 | 0.800642 | 1.309730e-48 | -8.615850e-47 |
Msa0595170 | Msa1123830 | 0.834524 | 2.851889e-56 | -8.615850e-47 |
Msa0864420 | Msa1123830 | 0.841006 | 6.171682e-58 | -8.615850e-47 |
Msa0867060 | Msa1123830 | 0.813540 | 2.430849e-51 | -8.615850e-47 |
Msa0888810 | Msa1123830 | 0.853325 | 2.574967e-61 | -8.615850e-47 |
Msa0925770 | Msa1123830 | 0.822336 | 2.501297e-53 | -8.615850e-47 |
Msa0943990 | Msa1123830 | 0.827462 | 1.543662e-54 | -8.615850e-47 |
Msa0963020 | Msa1123830 | 0.817470 | 3.242787e-52 | -8.615850e-47 |
Msa0968440 | Msa1123830 | 0.817913 | 2.577022e-52 | -8.615850e-47 |
PPI
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1123830 | MtrunA17_Chr7g0262991 | 97.810 | 959 | 21 | 0 | 1 | 959 | 1 | 959 | 0.0 | 1911 |
Msa1123830 | MtrunA17_Chr7g0254441 | 75.028 | 909 | 165 | 9 | 1 | 906 | 1 | 850 | 0.0 | 1213 |
Msa1123830 | MtrunA17_Chr7g0262301 | 84.756 | 164 | 25 | 0 | 655 | 818 | 44 | 207 | 1.01e-79 | 258 |
Msa1123830 | MtrunA17_Chr7g0234611 | 48.980 | 196 | 54 | 3 | 529 | 724 | 1 | 150 | 3.80e-41 | 149 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
Msa1123830 | AT4G11420.1 | 69.411 | 984 | 272 | 5 | 1 | 956 | 1 | 983 | 0.0 | 1275 |
Find 259 sgRNAs with CRISPR-Local
Find 514 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTAAATAAAATTTCGAAATT+AGG | 0.044115 | 7_3:+74817844 | Msa1123830:CDS |
TCAAGTTGACAGAAATATTT+TGG | 0.125020 | 7_3:+74816897 | Msa1123830:CDS |
TAAATAAAATTTCGAAATTA+GGG | 0.174166 | 7_3:+74817845 | Msa1123830:CDS |
TTCATATCAGACGAGTATTT+TGG | 0.188395 | 7_3:+74821369 | Msa1123830:three_prime_UTR |
TGGCTAATCTTAACAAATAT+CGG | 0.236726 | 7_3:+74816596 | Msa1123830:CDS |
TCAAGGATTCCCTAGAAATT+TGG | 0.239496 | 7_3:-74819597 | None:intergenic |
AATTTCTCTGGGAAACTTAC+AGG | 0.251310 | 7_3:+74815874 | Msa1123830:CDS |
AAGGAGCCTCTTGTGTTCTT+TGG | 0.257731 | 7_3:-74818752 | None:intergenic |
AGATACAATTGCAAGCTTTC+AGG | 0.258059 | 7_3:-74816649 | None:intergenic |
GCTTATACTGCTTACAAAAC+TGG | 0.261310 | 7_3:-74816528 | None:intergenic |
CAATCCCACTGGATCATAAA+TGG | 0.264502 | 7_3:-74821329 | None:intergenic |
GGGGCTGCTGCAGCAGCAGC+TGG | 0.264887 | 7_3:-74820893 | None:intergenic |
GGCTGAACGCCAAGCTAAAT+TGG | 0.281694 | 7_3:+74820718 | Msa1123830:CDS |
ATTGCGGAACAATTCGAAAT+TGG | 0.282749 | 7_3:+74815911 | Msa1123830:CDS |
CCCCATGGTTTAAATTTCTC+TGG | 0.287477 | 7_3:+74815862 | Msa1123830:CDS |
ATCTGTAGGGCCAAATTTCT+AGG | 0.289773 | 7_3:+74819587 | Msa1123830:intron |
GCTGCAGCAGCCCCAGCTCC+AGG | 0.290580 | 7_3:+74820902 | Msa1123830:CDS |
GGAGAAGAAGCTTCAGAAAT+TGG | 0.302055 | 7_3:+74819663 | Msa1123830:CDS |
AATTCTTCCTCATTTGGTTC+TGG | 0.310248 | 7_3:+74821040 | Msa1123830:CDS |
ACCTCCTCCTCGCCGGAACT+TGG | 0.310856 | 7_3:-74820936 | None:intergenic |
GGCCAAAACCATGGATCATT+TGG | 0.313534 | 7_3:+74819684 | Msa1123830:CDS |
TGATAGGAAACAATCAAAAC+TGG | 0.315349 | 7_3:+74818696 | Msa1123830:CDS |
CTTCAACTTGGTCATCTTCC+AGG | 0.315541 | 7_3:+74821080 | Msa1123830:CDS |
TCAACTTACCCCTTCAATTA+CGG | 0.318023 | 7_3:-74819136 | None:intergenic |
TTCCAAATGATCCATGGTTT+TGG | 0.318570 | 7_3:-74819686 | None:intergenic |
GCAGCTGGAGCAGCAGTGCC+AGG | 0.320822 | 7_3:-74820878 | None:intergenic |
AGATCTGTTGAAGATATTCA+TGG | 0.321278 | 7_3:+74816818 | Msa1123830:CDS |
CAACTTACCCCTTCAATTAC+GGG | 0.323728 | 7_3:-74819135 | None:intergenic |
TTACCCCAACGATCTGCTTC+TGG | 0.328071 | 7_3:-74820980 | None:intergenic |
GATCGTAATTCTTCCTCATT+TGG | 0.328698 | 7_3:+74821034 | Msa1123830:CDS |
GGAACGTATTTCCCTGGAGC+TGG | 0.333714 | 7_3:-74820914 | None:intergenic |
TCCTCATTTGGTTCTGGTGG+GGG | 0.346368 | 7_3:+74821046 | Msa1123830:CDS |
TGAAATTATCAGAAATCATT+TGG | 0.347794 | 7_3:+74816576 | Msa1123830:CDS |
TAGAATTCTAAAACTCAAAC+AGG | 0.349256 | 7_3:-74821222 | None:intergenic |
ATCTGAACGTACTTTGTAAC+GGG | 0.356356 | 7_3:-74814437 | None:intergenic |
TCCTCCAGAAGCAGATCGTT+GGG | 0.357386 | 7_3:+74820976 | Msa1123830:CDS |
AATACCACTTCTCTGCTATC+AGG | 0.360887 | 7_3:-74817160 | None:intergenic |
AGAGCAACCAGCACAATATC+AGG | 0.372092 | 7_3:-74821170 | None:intergenic |
CTTCCTCATTTGGTTCTGGT+GGG | 0.373310 | 7_3:+74821044 | Msa1123830:CDS |
CCCAACTTTGTCAGAGGTTG+TGG | 0.373901 | 7_3:+74818729 | Msa1123830:CDS |
AAAATTGAAGTATTATCTTA+AGG | 0.376850 | 7_3:+74820300 | Msa1123830:CDS |
AAAGCTCAGCGGCTGCTTAT+CGG | 0.378013 | 7_3:-74814293 | None:intergenic |
GAAAGACATTTACTATCTCT+TGG | 0.380647 | 7_3:+74817774 | Msa1123830:CDS |
CATTTATGATCCAGTGGGAT+TGG | 0.381255 | 7_3:+74821330 | Msa1123830:three_prime_UTR |
GGAGAAGAGGGAAGCATTGT+TGG | 0.382074 | 7_3:+74820799 | Msa1123830:CDS |
ACCTATTGAATTCCGCTTCG+CGG | 0.385015 | 7_3:-74820207 | None:intergenic |
CACTTCTCTGCTATCAGGCT+TGG | 0.385807 | 7_3:-74817155 | None:intergenic |
TTGAGGATGGCTAATCTCAT+AGG | 0.394508 | 7_3:+74817118 | Msa1123830:CDS |
GGAAATACGTTCCCAAGTTC+CGG | 0.398968 | 7_3:+74820924 | Msa1123830:CDS |
CCTGTCCGTCCAGTTGATCC+TGG | 0.400409 | 7_3:+74820860 | Msa1123830:CDS |
TACCTTGAGGTTGCTACAAC+AGG | 0.401938 | 7_3:+74817942 | Msa1123830:CDS |
CGAGGAGGAGGTGAAACAAC+AGG | 0.403757 | 7_3:+74820947 | Msa1123830:CDS |
GCCGTCACTTCTTGCTGAAC+TGG | 0.403998 | 7_3:+74817283 | Msa1123830:CDS |
AAAGGCTGAGAGGGAGAAGA+GGG | 0.410460 | 7_3:+74820787 | Msa1123830:CDS |
AAATGATTTGTCCTCCTGAT+AGG | 0.412493 | 7_3:+74818680 | Msa1123830:CDS |
GCAGCAGTGCCAGGATCAAC+TGG | 0.414042 | 7_3:-74820869 | None:intergenic |
ACCGCGAAGCGGAATTCAAT+AGG | 0.414418 | 7_3:+74820206 | Msa1123830:CDS |
ATGAAGATTGAGAACTTAGC+TGG | 0.416118 | 7_3:+74818074 | Msa1123830:CDS |
TCTCCATTTCCTGTCTCTCC+CGG | 0.417919 | 7_3:-74819645 | None:intergenic |
GATAAAACAAAACTGAAAAC+AGG | 0.421105 | 7_3:-74821416 | None:intergenic |
TTCCTCATTTGGTTCTGGTG+GGG | 0.421834 | 7_3:+74821045 | Msa1123830:CDS |
GGCCTAAGAGCTGGTTCAGC+AGG | 0.423168 | 7_3:-74820827 | None:intergenic |
ATGACTTGGAGGCTGATAAA+AGG | 0.425719 | 7_3:+74815769 | Msa1123830:CDS |
ACAGTCATCAAGGATGGTTT+TGG | 0.428141 | 7_3:-74816866 | None:intergenic |
TGCTCTTTCCAAATGATCCA+TGG | 0.429014 | 7_3:-74819692 | None:intergenic |
GTTCTTGCCTGATATTGTGC+TGG | 0.431907 | 7_3:+74821163 | Msa1123830:three_prime_UTR |
TACTGAGAAAATTGCACCTC+TGG | 0.434824 | 7_3:-74817895 | None:intergenic |
TCTTCCTCATTTGGTTCTGG+TGG | 0.434827 | 7_3:+74821043 | Msa1123830:CDS |
TTGTCTTTCCCCAGCTCTCA+AGG | 0.435752 | 7_3:+74817261 | Msa1123830:intron |
ACTAAGAGAAATTGAAGAAA+AGG | 0.436141 | 7_3:+74820769 | Msa1123830:CDS |
CCTCCTCCTCGCCGGAACTT+GGG | 0.437831 | 7_3:-74820935 | None:intergenic |
GGGCCTAACAAAATTGTAAT+GGG | 0.437868 | 7_3:-74814231 | None:intergenic |
CCCAGAGAAATTTAAACCAT+GGG | 0.444000 | 7_3:-74815863 | None:intergenic |
GGCTAATCTTAACAAATATC+GGG | 0.445404 | 7_3:+74816597 | Msa1123830:CDS |
TCAAGTACGATCACGCATCC+TGG | 0.446052 | 7_3:-74821098 | None:intergenic |
TGGAAGCTGAAAAGCTTTCA+AGG | 0.447111 | 7_3:+74819097 | Msa1123830:CDS |
AAAAGGCTGAGAGGGAGAAG+AGG | 0.447531 | 7_3:+74820786 | Msa1123830:CDS |
GTAATGCTTGCAGGCTTCAA+AGG | 0.447700 | 7_3:+74817723 | Msa1123830:intron |
AGCTGAACAAGCACGTAGTC+AGG | 0.448632 | 7_3:+74815716 | Msa1123830:CDS |
GACCTGCTGAACCAGCTCTT+AGG | 0.452937 | 7_3:+74820825 | Msa1123830:CDS |
CGTACTTTGTAACGGGTTTG+TGG | 0.453793 | 7_3:-74814430 | None:intergenic |
TGGGCCTAACAAAATTGTAA+TGG | 0.454199 | 7_3:-74814232 | None:intergenic |
GAACGTATTTCCCTGGAGCT+GGG | 0.455189 | 7_3:-74820913 | None:intergenic |
TGAAAAGCTTTCAAGGAGAA+AGG | 0.462564 | 7_3:+74819104 | Msa1123830:CDS |
GGACGGACAGGAGGCTCATA+AGG | 0.465355 | 7_3:-74820848 | None:intergenic |
TCAATAGGTTGAAGAAAGAC+AGG | 0.467259 | 7_3:+74820221 | Msa1123830:CDS |
CTAAGCAGACAGCGCCATGC+TGG | 0.467723 | 7_3:+74819958 | Msa1123830:CDS |
GCAGCAGGCCGGATGGTGAC+AGG | 0.468013 | 7_3:+74821008 | Msa1123830:CDS |
TCCAATGTTTATGAACTCCT+TGG | 0.468095 | 7_3:+74821276 | Msa1123830:three_prime_UTR |
CCTTGATGTGGATGACTTGG+AGG | 0.468408 | 7_3:+74815758 | Msa1123830:CDS |
CTCCTCCAGAAGCAGATCGT+TGG | 0.469492 | 7_3:+74820975 | Msa1123830:CDS |
CACTGAACTTGAACTCTGGC+AGG | 0.470180 | 7_3:+74816702 | Msa1123830:CDS |
TCTTGAAGCTGATGGCTTGA+GGG | 0.471343 | 7_3:+74818615 | Msa1123830:CDS |
CCCAAGTTCCGGCGAGGAGG+AGG | 0.471702 | 7_3:+74820935 | Msa1123830:CDS |
CAACGATCTGCTTCTGGAGG+AGG | 0.472979 | 7_3:-74820974 | None:intergenic |
AAATTGTAATGGGTCGGGCT+TGG | 0.473400 | 7_3:-74814221 | None:intergenic |
TGCATATCAGCAGCGATTAG+TGG | 0.476367 | 7_3:+74819747 | Msa1123830:CDS |
GAAATTTCTATCAATGAAAG+TGG | 0.476411 | 7_3:+74818157 | Msa1123830:CDS |
CCCATGGTTTAAATTTCTCT+GGG | 0.476609 | 7_3:+74815863 | Msa1123830:CDS |
GAAAATCCATTATTGAGAAA+AGG | 0.478242 | 7_3:+74818779 | Msa1123830:CDS |
GCCACAACCTCTGACAAAGT+TGG | 0.484054 | 7_3:-74818730 | None:intergenic |
CCACAACCTCTGACAAAGTT+GGG | 0.484521 | 7_3:-74818729 | None:intergenic |
GAGAAGAGGGAAGCATTGTT+GGG | 0.484930 | 7_3:+74820800 | Msa1123830:CDS |
GATCAATGTCGGGCAGAAGC+AGG | 0.485742 | 7_3:+74815470 | Msa1123830:CDS |
AGAAGCCGAGGCTTTACGTC+TGG | 0.485994 | 7_3:+74819077 | Msa1123830:CDS |
AGCTATGTTAGTGGCGAGAA+AGG | 0.486495 | 7_3:+74815810 | Msa1123830:CDS |
CGAACAACTCCGGGAGAGAC+AGG | 0.487611 | 7_3:+74819636 | Msa1123830:CDS |
ACTCCGGGAGAGACAGGAAA+TGG | 0.488034 | 7_3:+74819642 | Msa1123830:CDS |
TCAAAGAATCCAAAGGGAAA+AGG | 0.490575 | 7_3:+74819038 | Msa1123830:CDS |
GGAAAATGAATTTCTACCCT+CGG | 0.491238 | 7_3:+74817795 | Msa1123830:CDS |
TGAGGCCATCCTTAGCAAAC+CGG | 0.492540 | 7_3:-74815608 | None:intergenic |
TGTCCCAGCACTTGAAAAGT+TGG | 0.493339 | 7_3:+74817918 | Msa1123830:CDS |
AACTTGGGAACGTATTTCCC+TGG | 0.493869 | 7_3:-74820920 | None:intergenic |
TAACAAAATTGTAATGGGTC+GGG | 0.495581 | 7_3:-74814226 | None:intergenic |
AGAACGACAGCTTCTTGAAA+AGG | 0.498078 | 7_3:+74818813 | Msa1123830:CDS |
GGAGAGGCTTAGTCGAATGA+TGG | 0.498886 | 7_3:+74819996 | Msa1123830:CDS |
AGGAAAGGATAGATCTGATC+GGG | 0.499212 | 7_3:+74815830 | Msa1123830:CDS |
TTGTTTCACCTCCTCCTCGC+CGG | 0.500555 | 7_3:-74820943 | None:intergenic |
TGATCCAGTGGGATTGGATA+CGG | 0.501207 | 7_3:+74821336 | Msa1123830:three_prime_UTR |
AGTTCTCAATCTTCATCGAT+TGG | 0.502020 | 7_3:-74818067 | None:intergenic |
CGATCCCACCTGTCACCATC+CGG | 0.504085 | 7_3:-74821016 | None:intergenic |
TAATGCTTGCAGGCTTCAAA+GGG | 0.506408 | 7_3:+74817724 | Msa1123830:intron |
GAATGTTAGTTCACTGGAGG+AGG | 0.507826 | 7_3:+74815659 | Msa1123830:CDS |
GCAAGTGAATGTTAGTTCAC+TGG | 0.510294 | 7_3:+74815653 | Msa1123830:CDS |
TTACAGAGTTGATCAATGTC+GGG | 0.511765 | 7_3:+74815460 | Msa1123830:intron |
AATTGAAGAAAAGGCTGAGA+GGG | 0.512136 | 7_3:+74820778 | Msa1123830:CDS |
ATCGGGAGCTTGTTACCCCA+TGG | 0.512764 | 7_3:+74815847 | Msa1123830:CDS |
TTGCCACTGAACTTGAACTC+TGG | 0.514941 | 7_3:+74816698 | Msa1123830:CDS |
TTTACAGAGTTGATCAATGT+CGG | 0.516692 | 7_3:+74815459 | Msa1123830:intron |
GAAAAGCTTTCAAGGAGAAA+GGG | 0.518287 | 7_3:+74819105 | Msa1123830:CDS |
TACAAAACTGGAAAGCTCGA+TGG | 0.518952 | 7_3:-74816516 | None:intergenic |
CCAGGATCAACTGGACGGAC+AGG | 0.522631 | 7_3:-74820860 | None:intergenic |
ACCAAGGAGTTCATAAACAT+TGG | 0.525353 | 7_3:-74821277 | None:intergenic |
GTTCGCAACAAAGCAAAAGC+TGG | 0.526707 | 7_3:+74814375 | Msa1123830:five_prime_UTR |
TAGCTCAGCATCAAGTCCTC+TGG | 0.527861 | 7_3:-74815792 | None:intergenic |
CCTCCAAGTCATCCACATCA+AGG | 0.528214 | 7_3:-74815758 | None:intergenic |
GCGTGAGGAGGAAGAAGCTC+GGG | 0.529639 | 7_3:+74820348 | Msa1123830:CDS |
CTATCTCATCCAATTTAGCT+TGG | 0.529887 | 7_3:-74820727 | None:intergenic |
GTCTTGAAGCTGATGGCTTG+AGG | 0.530493 | 7_3:+74818614 | Msa1123830:CDS |
TGATGGCTTGAGGGATCACT+TGG | 0.531074 | 7_3:+74818624 | Msa1123830:CDS |
GAGGAAAGGCCGGTTTGCTA+AGG | 0.536219 | 7_3:+74815599 | Msa1123830:CDS |
CTTTCAGGAGCAGAAAGGTC+AGG | 0.536301 | 7_3:-74816634 | None:intergenic |
GGCTCATAAGGCCTAAGAGC+TGG | 0.536976 | 7_3:-74820836 | None:intergenic |
AGCCCTTGATGTGGATGACT+TGG | 0.538804 | 7_3:+74815755 | Msa1123830:CDS |
CTGCAGCAGCCCCAGCTCCA+GGG | 0.538924 | 7_3:+74820903 | Msa1123830:CDS |
CACATCAAGGGCTTCTTCCA+AGG | 0.539139 | 7_3:-74815745 | None:intergenic |
TCCCAGAGAAATTTAAACCA+TGG | 0.540858 | 7_3:-74815864 | None:intergenic |
CTAACAAAATTGTAATGGGT+CGG | 0.540883 | 7_3:-74814227 | None:intergenic |
ATTTATATCATGCTTATGCA+TGG | 0.541184 | 7_3:+74816933 | Msa1123830:CDS |
GAAAATTCAAAGAATCCAAA+GGG | 0.541840 | 7_3:+74819032 | Msa1123830:CDS |
TCGCGCATGGCAGAAAACAC+TGG | 0.542348 | 7_3:+74815536 | Msa1123830:CDS |
ATTGAAGTATTATCTTAAGG+TGG | 0.542932 | 7_3:+74820303 | Msa1123830:CDS |
ACAAAACTGGAAAGCTCGAT+GGG | 0.544319 | 7_3:-74816515 | None:intergenic |
AAAGGTCAGGTCGGTCTCGT+TGG | 0.544555 | 7_3:-74816621 | None:intergenic |
GACGTTGGTCGAACAACTCC+GGG | 0.546261 | 7_3:+74819627 | Msa1123830:CDS |
TGACGTTGGTCGAACAACTC+CGG | 0.546593 | 7_3:+74819626 | Msa1123830:CDS |
ACAAGCACGTAGTCAGGCTC+AGG | 0.550900 | 7_3:+74815722 | Msa1123830:CDS |
AATCTGAACGTACTTTGTAA+CGG | 0.551731 | 7_3:-74814438 | None:intergenic |
ACAGGGAGGACCGTATCTCT+AGG | 0.551931 | 7_3:+74820239 | Msa1123830:CDS |
GAGGAGGAGGTGAAACAACA+GGG | 0.553020 | 7_3:+74820948 | Msa1123830:CDS |
AATATCTTCAACAGATCTGA+AGG | 0.553619 | 7_3:-74816813 | None:intergenic |
AATAAAATTTCGAAATTAGG+GGG | 0.554003 | 7_3:+74817847 | Msa1123830:CDS |
TGATATGCAGCATCAATTAG+CGG | 0.555550 | 7_3:-74819733 | None:intergenic |
AGCTTCCAGACGTAAAGCCT+CGG | 0.556052 | 7_3:-74819082 | None:intergenic |
GGAAAATTCAAAGAATCCAA+AGG | 0.556328 | 7_3:+74819031 | Msa1123830:CDS |
CCTCCTCATGATCGCACTCA+CGG | 0.557679 | 7_3:+74817055 | Msa1123830:CDS |
CATTATTGAGAAAAGGAAAG+AGG | 0.560575 | 7_3:+74818786 | Msa1123830:CDS |
AGAGTTAATAAGATCCAAGA+AGG | 0.561059 | 7_3:-74821459 | None:intergenic |
GCAAGCTTTCAGGAGCAGAA+AGG | 0.561168 | 7_3:-74816639 | None:intergenic |
GACATAGTAAACAGTCATCA+AGG | 0.561692 | 7_3:-74816876 | None:intergenic |
TCTGTAGGGCCAAATTTCTA+GGG | 0.561705 | 7_3:+74819588 | Msa1123830:intron |
TGCGTGAGGAGGAAGAAGCT+CGG | 0.561806 | 7_3:+74820347 | Msa1123830:CDS |
CTTCGCTTCATCTGTTCCAG+AGG | 0.566768 | 7_3:+74817879 | Msa1123830:CDS |
TGAAGATTGAGAACTTAGCT+GGG | 0.571963 | 7_3:+74818075 | Msa1123830:CDS |
GTTCAAGGTCATCTTCAACT+TGG | 0.572493 | 7_3:+74821068 | Msa1123830:CDS |
GTGTTGACATGAGGAAAGGC+CGG | 0.572499 | 7_3:+74815589 | Msa1123830:CDS |
GCAGGCCGGATGGTGACAGG+TGG | 0.573758 | 7_3:+74821011 | Msa1123830:CDS |
TCAGAAATTGGCCAAAACCA+TGG | 0.575799 | 7_3:+74819675 | Msa1123830:CDS |
TGCTGGAGATCTCAATGAGA+AGG | 0.577519 | 7_3:+74819975 | Msa1123830:CDS |
GAGAGGCTTAGTCGAATGAT+GGG | 0.578055 | 7_3:+74819997 | Msa1123830:CDS |
CTGAACAATTGAATAAGGCA+AGG | 0.580743 | 7_3:+74818656 | Msa1123830:CDS |
ATTGCTCCCAACTTTGTCAG+AGG | 0.581414 | 7_3:+74818723 | Msa1123830:CDS |
TTTGATTGTTTCCTATCAGG+AGG | 0.581585 | 7_3:-74818691 | None:intergenic |
AAATAAAATTTCGAAATTAG+GGG | 0.583549 | 7_3:+74817846 | Msa1123830:CDS |
TATCAGGCAAGAACCCCAAA+GGG | 0.584611 | 7_3:-74821154 | None:intergenic |
TGTTCCATTTATGATCCAGT+GGG | 0.584751 | 7_3:+74821325 | Msa1123830:three_prime_UTR |
AACAGTAGCAGCAGGCCGGA+TGG | 0.585245 | 7_3:+74821001 | Msa1123830:CDS |
TTGATGCTGAGCTATGTTAG+TGG | 0.585663 | 7_3:+74815801 | Msa1123830:CDS |
CTCCAAGTCATCCACATCAA+GGG | 0.586487 | 7_3:-74815757 | None:intergenic |
AAGGAAAGGATAGATCTGAT+CGG | 0.586809 | 7_3:+74815829 | Msa1123830:CDS |
ATATTATACGATACTGAATG+AGG | 0.586986 | 7_3:-74815626 | None:intergenic |
TCTCAGAGTCTTGAAGCTGA+TGG | 0.588116 | 7_3:+74818607 | Msa1123830:intron |
GGGTAACAGTAGCAGCAGGC+CGG | 0.589125 | 7_3:+74820997 | Msa1123830:CDS |
AGCAGCGATTAGTGGAAGAG+AGG | 0.590290 | 7_3:+74819755 | Msa1123830:CDS |
AACGTATTTCCCTGGAGCTG+GGG | 0.590645 | 7_3:-74820912 | None:intergenic |
CTTTGTGTTGACATGAGGAA+AGG | 0.590890 | 7_3:+74815585 | Msa1123830:CDS |
AAGAATCCAAAGGGAAAAGG+AGG | 0.591136 | 7_3:+74819041 | Msa1123830:CDS |
AAAGGCCGGTTTGCTAAGGA+TGG | 0.591699 | 7_3:+74815603 | Msa1123830:CDS |
TACTCTCCAGGAAACTGGAG+AGG | 0.595502 | 7_3:+74820266 | Msa1123830:CDS |
AATGCTCTCAAAAGAGCAGA+AGG | 0.596365 | 7_3:+74815336 | Msa1123830:CDS |
GTTGGGGTAACAGTAGCAGC+AGG | 0.598534 | 7_3:+74820993 | Msa1123830:CDS |
ATGAAGAAGCAGAGCAAAGG+CGG | 0.598613 | 7_3:+74818986 | Msa1123830:CDS |
GAGATCTCAATGAGAAGGAG+AGG | 0.599256 | 7_3:+74819980 | Msa1123830:CDS |
ACCAGTTCAGCAAGAAGTGA+CGG | 0.599796 | 7_3:-74817284 | None:intergenic |
ATCCTTGATGCAGTTGACGT+TGG | 0.599796 | 7_3:+74819612 | Msa1123830:CDS |
GCACCGTGAGTGCGATCATG+AGG | 0.600087 | 7_3:-74817058 | None:intergenic |
AGAGTAAAATCCTAGAGATA+CGG | 0.601570 | 7_3:-74820249 | None:intergenic |
GACCAACGTCAACTGCATCA+AGG | 0.602329 | 7_3:-74819614 | None:intergenic |
AAGAGATAAAGAAGAAGCCG+AGG | 0.602354 | 7_3:+74819065 | Msa1123830:CDS |
AAGACAGAAATTGCGTGAGG+AGG | 0.603400 | 7_3:+74820336 | Msa1123830:CDS |
CACCTGTTGTAGCAACCTCA+AGG | 0.603518 | 7_3:-74817944 | None:intergenic |
CTCTGGAACAGATGAAGCGA+AGG | 0.604213 | 7_3:-74817878 | None:intergenic |
TATTCATGGATTAATGTGCA+TGG | 0.604460 | 7_3:+74816832 | Msa1123830:CDS |
TTGATGAAGAAGCAGAGCAA+AGG | 0.605854 | 7_3:+74818983 | Msa1123830:CDS |
CAAGCCTGATAGCAGAGAAG+TGG | 0.606240 | 7_3:+74817156 | Msa1123830:CDS |
ATGTTCCATTTATGATCCAG+TGG | 0.607073 | 7_3:+74821324 | Msa1123830:three_prime_UTR |
ATTACCGTATCCAATCCCAC+TGG | 0.607424 | 7_3:-74821340 | None:intergenic |
ACTCTCCAGGAAACTGGAGA+GGG | 0.610063 | 7_3:+74820267 | Msa1123830:CDS |
CCAGAGAAATTTAAACCATG+GGG | 0.611745 | 7_3:-74815862 | None:intergenic |
TTGAAAAGTTGGCTACCTTG+AGG | 0.612827 | 7_3:+74817929 | Msa1123830:CDS |
CTGCCAGAGTTCAAGTTCAG+TGG | 0.619555 | 7_3:-74816701 | None:intergenic |
ATATCAGGCAAGAACCCCAA+AGG | 0.621959 | 7_3:-74821155 | None:intergenic |
CAGGCCGGATGGTGACAGGT+GGG | 0.622641 | 7_3:+74821012 | Msa1123830:CDS |
GAAGAAGCTCGGGAGCGTGA+AGG | 0.623829 | 7_3:+74820358 | Msa1123830:CDS |
CTTCGAAAAGATATCGCGCA+TGG | 0.628020 | 7_3:+74815523 | Msa1123830:CDS |
AAATTGAAGAAAAGGCTGAG+AGG | 0.628286 | 7_3:+74820777 | Msa1123830:CDS |
TGTTAGTGGCGAGAAAGGAA+AGG | 0.630286 | 7_3:+74815815 | Msa1123830:CDS |
AAAAGAGCGAAATTTGAGGA+TGG | 0.632531 | 7_3:+74817105 | Msa1123830:CDS |
CAATAGGTTGAAGAAAGACA+GGG | 0.633169 | 7_3:+74820222 | Msa1123830:CDS |
TAGTAAACAGTCATCAAGGA+TGG | 0.633737 | 7_3:-74816872 | None:intergenic |
CCGTGAGTGCGATCATGAGG+AGG | 0.635048 | 7_3:-74817055 | None:intergenic |
GGACAGTGCTTGAGATATTG+CGG | 0.635062 | 7_3:+74815895 | Msa1123830:CDS |
GGATCAACTGGACGGACAGG+AGG | 0.635133 | 7_3:-74820857 | None:intergenic |
GCAAAATGAGCAGTAAATCA+CGG | 0.637255 | 7_3:-74821132 | None:intergenic |
TCTCATTGAGATCTCCAGCA+TGG | 0.638426 | 7_3:-74819972 | None:intergenic |
CCCCAACGATCTGCTTCTGG+AGG | 0.639482 | 7_3:-74820977 | None:intergenic |
AACGCGAGGAGGAGTCAAAG+AGG | 0.639800 | 7_3:+74818944 | Msa1123830:CDS |
GGAAAGAGCAAAGAGAGAAG+AGG | 0.640905 | 7_3:+74819705 | Msa1123830:CDS |
GTTCCCAAGTTCCGGCGAGG+AGG | 0.642650 | 7_3:+74820932 | Msa1123830:CDS |
TTGTGGCCAAAGAACACAAG+AGG | 0.642857 | 7_3:+74818746 | Msa1123830:CDS |
AGTTGTGAGTCACCGCGAAG+CGG | 0.645879 | 7_3:+74820195 | Msa1123830:CDS |
GCAACAAAGCAAAAGCTGGA+CGG | 0.658554 | 7_3:+74814379 | Msa1123830:five_prime_UTR |
CAGTGCCAGGATCAACTGGA+CGG | 0.663272 | 7_3:-74820865 | None:intergenic |
GAGAAGACAGAAATTGCGTG+AGG | 0.663361 | 7_3:+74820333 | Msa1123830:CDS |
CAAACAATAACACTTTGAAG+AGG | 0.663573 | 7_3:+74814198 | None:intergenic |
TCGAGCTTTGTGTTGACATG+AGG | 0.663686 | 7_3:+74815580 | Msa1123830:CDS |
GCAAGTGCGCAAAAGCTCAG+CGG | 0.665186 | 7_3:-74814304 | None:intergenic |
CGTGTTCTTCAACAGAACCA+AGG | 0.665798 | 7_3:-74821293 | None:intergenic |
CCTCCAGAAGCAGATCGTTG+GGG | 0.672181 | 7_3:+74820977 | Msa1123830:CDS |
TACGTTCCCAAGTTCCGGCG+AGG | 0.672418 | 7_3:+74820929 | Msa1123830:CDS |
AGTGAATGTTAGTTCACTGG+AGG | 0.672817 | 7_3:+74815656 | Msa1123830:CDS |
CAGGAGCAGAAAGGTCAGGT+CGG | 0.674789 | 7_3:-74816630 | None:intergenic |
AGGAGGAGGTGAAACAACAG+GGG | 0.677894 | 7_3:+74820949 | Msa1123830:CDS |
GATAGGAAACAATCAAAACT+GGG | 0.677940 | 7_3:+74818697 | Msa1123830:CDS |
CTTGGAAGAAGCCCTTGATG+TGG | 0.684167 | 7_3:+74815746 | Msa1123830:CDS |
GGAGGCTGATAAAAGGCCAG+AGG | 0.691381 | 7_3:+74815776 | Msa1123830:CDS |
TTGCAACTGAGATTGAGCAG+AGG | 0.710712 | 7_3:+74819010 | Msa1123830:CDS |
AGAATTCTAAAACTCAAACA+GGG | 0.719811 | 7_3:-74821221 | None:intergenic |
TAGGTTGAAGAAAGACAGGG+AGG | 0.748741 | 7_3:+74820225 | Msa1123830:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAATTGAATCAAAAAATAA+CGG | - | chr7_3:74814799-74814818 | None:intergenic | 10.0% |
!!! | GAATTATTTTAATTTTAACA+TGG | + | chr7_3:74816183-74816202 | Msa1123830:intron | 10.0% |
!! | TAGTTAAAAAACAATAATAT+AGG | + | chr7_3:74816433-74816452 | Msa1123830:intron | 10.0% |
!! | TAAATAAAATTTCGAAATTA+GGG | + | chr7_3:74817845-74817864 | Msa1123830:CDS | 10.0% |
!! | TTTCAAATTTAAACATATAA+AGG | - | chr7_3:74818915-74818934 | None:intergenic | 10.0% |
!! | TAATGGTAAAAACTTATTAT+GGG | - | chr7_3:74814254-74814273 | None:intergenic | 15.0% |
!! | TTAATGGTAAAAACTTATTA+TGG | - | chr7_3:74814255-74814274 | None:intergenic | 15.0% |
!!! | AATATCAGTTTTATTGTTAA+TGG | + | chr7_3:74814630-74814649 | Msa1123830:intron | 15.0% |
!! | AATTTACAATTTGCAAAATT+TGG | + | chr7_3:74814976-74814995 | Msa1123830:intron | 15.0% |
!! | TTAGAATTATCTAGAAAAAA+TGG | - | chr7_3:74815182-74815201 | None:intergenic | 15.0% |
!! | AAACATAAATATCATCAAAT+TGG | - | chr7_3:74816157-74816176 | None:intergenic | 15.0% |
!! | TTAAAAAACAATAATATAGG+AGG | + | chr7_3:74816436-74816455 | Msa1123830:intron | 15.0% |
!!! | TTTTAATTTTTGCATTTCAT+GGG | + | chr7_3:74817461-74817480 | Msa1123830:intron | 15.0% |
!!! | TTTCGAAATTTTATTTAGAA+GGG | - | chr7_3:74817842-74817861 | None:intergenic | 15.0% |
!!! | ATTTCGAAATTTTATTTAGA+AGG | - | chr7_3:74817843-74817862 | None:intergenic | 15.0% |
!! | CTAAATAAAATTTCGAAATT+AGG | + | chr7_3:74817844-74817863 | Msa1123830:CDS | 15.0% |
!! | AAATAAAATTTCGAAATTAG+GGG | + | chr7_3:74817846-74817865 | Msa1123830:CDS | 15.0% |
!! | TTCTGTTTAAATTAATGTTA+TGG | + | chr7_3:74818256-74818275 | Msa1123830:intron | 15.0% |
!!! | GTTTAAATTTGAAATTTTGA+AGG | + | chr7_3:74818921-74818940 | Msa1123830:intron | 15.0% |
!! | AGTAATATAATATATTGGAT+GGG | - | chr7_3:74819222-74819241 | None:intergenic | 15.0% |
!! | AAGTAATATAATATATTGGA+TGG | - | chr7_3:74819223-74819242 | None:intergenic | 15.0% |
!!! | ATCATTTTAAAATTTTGGAT+GGG | - | chr7_3:74819299-74819318 | None:intergenic | 15.0% |
!! | AAATAACATCAATTGTTAAA+AGG | - | chr7_3:74820075-74820094 | None:intergenic | 15.0% |
!! | TACTAGGTAAATTTAATAAA+TGG | - | chr7_3:74820123-74820142 | None:intergenic | 15.0% |
!!! | AAAATTGAAGTATTATCTTA+AGG | + | chr7_3:74820300-74820319 | Msa1123830:CDS | 15.0% |
!!! | TTGTTTTATCGAAAATAAAA+AGG | + | chr7_3:74821429-74821448 | Msa1123830:three_prime_UTR | 15.0% |
!! | AAAATCGAAGGAAAAAAAAA+AGG | - | chr7_3:74814466-74814485 | None:intergenic | 20.0% |
!! | TTTCAGTTTATGATTATCAT+CGG | + | chr7_3:74814695-74814714 | Msa1123830:intron | 20.0% |
!!! | TTGTGTTTTACTATTGTTTT+TGG | + | chr7_3:74815209-74815228 | Msa1123830:intron | 20.0% |
!! | AAGAAAAATTACAGCATATA+AGG | - | chr7_3:74815940-74815959 | None:intergenic | 20.0% |
!! | TGAAATTATCAGAAATCATT+TGG | + | chr7_3:74816576-74816595 | Msa1123830:CDS | 20.0% |
!! | TCAGATATTTATATACTACT+GGG | - | chr7_3:74817207-74817226 | None:intergenic | 20.0% |
!! | ATCAGATATTTATATACTAC+TGG | - | chr7_3:74817208-74817227 | None:intergenic | 20.0% |
!!! | TATTTTGTCCTTCAAATATT+TGG | + | chr7_3:74817387-74817406 | Msa1123830:intron | 20.0% |
!!! | CTTTTAATTTTTGCATTTCA+TGG | + | chr7_3:74817460-74817479 | Msa1123830:intron | 20.0% |
!!! | TTCGAAATTTTATTTAGAAG+GGG | - | chr7_3:74817841-74817860 | None:intergenic | 20.0% |
!! | AATAAAATTTCGAAATTAGG+GGG | + | chr7_3:74817847-74817866 | Msa1123830:CDS | 20.0% |
!!! | TTTTCCTTTATCTTAGTATT+AGG | + | chr7_3:74818220-74818239 | Msa1123830:intron | 20.0% |
!! | TGTTTAAATTAATGTTATGG+TGG | + | chr7_3:74818259-74818278 | Msa1123830:intron | 20.0% |
!! | GTAATATAATATATTGGATG+GGG | - | chr7_3:74819221-74819240 | None:intergenic | 20.0% |
!! | CGCTAAGTAATATAATATAT+TGG | - | chr7_3:74819227-74819246 | None:intergenic | 20.0% |
!!! | GATCATTTTAAAATTTTGGA+TGG | - | chr7_3:74819300-74819319 | None:intergenic | 20.0% |
!!! | GAGAGATCATTTTAAAATTT+TGG | - | chr7_3:74819304-74819323 | None:intergenic | 20.0% |
!! | AAAAATTGAATTGTTTCCAA+GGG | - | chr7_3:74819822-74819841 | None:intergenic | 20.0% |
!! | TAAAAATTGAATTGTTTCCA+AGG | - | chr7_3:74819823-74819842 | None:intergenic | 20.0% |
!!! | ATCATTATTGATTTGTTTTC+TGG | + | chr7_3:74820383-74820402 | Msa1123830:intron | 20.0% |
!! | TTTCAATACTATATGATATG+GGG | - | chr7_3:74820434-74820453 | None:intergenic | 20.0% |
!! | CTTTCAATACTATATGATAT+GGG | - | chr7_3:74820435-74820454 | None:intergenic | 20.0% |
!! | TGAAATACAAAAGATAGAAT+TGG | - | chr7_3:74820530-74820549 | None:intergenic | 20.0% |
!! | CTTTCATTATCACTATCTTT+TGG | + | chr7_3:74815046-74815065 | Msa1123830:intron | 25.0% |
! | ACAGCTAATTACATTACAAT+TGG | + | chr7_3:74815078-74815097 | Msa1123830:intron | 25.0% |
! | TCTTAGTTCATGAATAACAT+CGG | + | chr7_3:74815119-74815138 | Msa1123830:intron | 25.0% |
! | TTGATTATCACTCTATTTAC+AGG | + | chr7_3:74815264-74815283 | Msa1123830:intron | 25.0% |
! | TGATTATCACTCTATTTACA+GGG | + | chr7_3:74815265-74815284 | Msa1123830:intron | 25.0% |
! | ATATTATACGATACTGAATG+AGG | - | chr7_3:74815629-74815648 | None:intergenic | 25.0% |
! | AGATTAATTGCTTGTCATTA+GGG | + | chr7_3:74816367-74816386 | Msa1123830:intron | 25.0% |
! | TGGCTAATCTTAACAAATAT+CGG | + | chr7_3:74816596-74816615 | Msa1123830:CDS | 25.0% |
!!! | TCAAGTTGACAGAAATATTT+TGG | + | chr7_3:74816897-74816916 | Msa1123830:CDS | 25.0% |
! | ATTTATATCATGCTTATGCA+TGG | + | chr7_3:74816933-74816952 | Msa1123830:CDS | 25.0% |
! | CAACAAAAATCTTAGTCAAA+AGG | + | chr7_3:74816985-74817004 | Msa1123830:CDS | 25.0% |
! | AAAACAGAAACAAAAGCAAA+TGG | - | chr7_3:74817243-74817262 | None:intergenic | 25.0% |
! | GAAATTTCTATCAATGAAAG+TGG | + | chr7_3:74818157-74818176 | Msa1123830:CDS | 25.0% |
!! | AAATTACAACATTTTTCGTG+TGG | - | chr7_3:74818184-74818203 | None:intergenic | 25.0% |
!! | TGTTGTAATTTTCTGTAAGA+CGG | + | chr7_3:74818193-74818212 | Msa1123830:CDS | 25.0% |
! | TCTTCCTAATACTAAGATAA+AGG | - | chr7_3:74818227-74818246 | None:intergenic | 25.0% |
!!! | TGGTTGATTTTTGATTTAAG+TGG | + | chr7_3:74818336-74818355 | Msa1123830:intron | 25.0% |
! | AATGTATTCCTCAAATAACA+TGG | - | chr7_3:74818367-74818386 | None:intergenic | 25.0% |
! | TTATGTAAACAACTTATCCT+AGG | - | chr7_3:74818475-74818494 | None:intergenic | 25.0% |
!! | TCTCATTTTACCAAATCTTA+CGG | + | chr7_3:74818567-74818586 | Msa1123830:intron | 25.0% |
!! | TTTTGCTGAACAATTGAATA+AGG | + | chr7_3:74818651-74818670 | Msa1123830:CDS | 25.0% |
! | GAAAATCCATTATTGAGAAA+AGG | + | chr7_3:74818779-74818798 | Msa1123830:CDS | 25.0% |
! | TATTATTCATTTCGCTCATT+AGG | + | chr7_3:74818859-74818878 | Msa1123830:intron | 25.0% |
! | GAAAATTCAAAGAATCCAAA+GGG | + | chr7_3:74819032-74819051 | Msa1123830:CDS | 25.0% |
!! | AAGCTTGTTTAAATAGAATG+CGG | - | chr7_3:74819886-74819905 | None:intergenic | 25.0% |
! | AGTTAGTATCATAAACTCTT+AGG | + | chr7_3:74820026-74820045 | Msa1123830:intron | 25.0% |
! | AACATCAATTGTTAAAAGGT+AGG | - | chr7_3:74820071-74820090 | None:intergenic | 25.0% |
! | GATAAAACATTAGACATACT+AGG | - | chr7_3:74820139-74820158 | None:intergenic | 25.0% |
!! | ATTGAAGTATTATCTTAAGG+TGG | + | chr7_3:74820303-74820322 | Msa1123830:CDS | 25.0% |
! | TTCAATACTATATGATATGG+GGG | - | chr7_3:74820433-74820452 | None:intergenic | 25.0% |
! | CCTTTCAATACTATATGATA+TGG | - | chr7_3:74820436-74820455 | None:intergenic | 25.0% |
!! | CCATATCATATAGTATTGAA+AGG | + | chr7_3:74820433-74820452 | Msa1123830:intron | 25.0% |
! | CACATGTTAACTAAATACAA+AGG | - | chr7_3:74820656-74820675 | None:intergenic | 25.0% |
! | CTTTGTATTTAGTTAACATG+TGG | + | chr7_3:74820654-74820673 | Msa1123830:intron | 25.0% |
! | ACTAAGAGAAATTGAAGAAA+AGG | + | chr7_3:74820769-74820788 | Msa1123830:CDS | 25.0% |
!!! | AGAATTCTAAAACTCAAACA+GGG | - | chr7_3:74821224-74821243 | None:intergenic | 25.0% |
!!! | TAGAATTCTAAAACTCAAAC+AGG | - | chr7_3:74821225-74821244 | None:intergenic | 25.0% |
!! | TCATAAATGGAACATTTTGT+TGG | - | chr7_3:74821319-74821338 | None:intergenic | 25.0% |
! | GATAAAACAAAACTGAAAAC+AGG | - | chr7_3:74821419-74821438 | None:intergenic | 25.0% |
!! | TAACAAAATTGTAATGGGTC+GGG | - | chr7_3:74814229-74814248 | None:intergenic | 30.0% |
!! | CTAACAAAATTGTAATGGGT+CGG | - | chr7_3:74814230-74814249 | None:intergenic | 30.0% |
AATCTGAACGTACTTTGTAA+CGG | - | chr7_3:74814441-74814460 | None:intergenic | 30.0% | |
GAGAATGAAAAGAAAATCGA+AGG | - | chr7_3:74814478-74814497 | None:intergenic | 30.0% | |
!! | TATGATTATCATCGGTTTAG+TGG | + | chr7_3:74814703-74814722 | Msa1123830:intron | 30.0% |
!! | ATGATTATCATCGGTTTAGT+GGG | + | chr7_3:74814704-74814723 | Msa1123830:intron | 30.0% |
GCTAATTACATTACAATTGG+TGG | + | chr7_3:74815081-74815100 | Msa1123830:intron | 30.0% | |
! | TTTACAGAGTTGATCAATGT+CGG | + | chr7_3:74815459-74815478 | Msa1123830:intron | 30.0% |
TAACATTTGCCATATTGATG+TGG | + | chr7_3:74816065-74816084 | Msa1123830:intron | 30.0% | |
GAGATTAATTGCTTGTCATT+AGG | + | chr7_3:74816366-74816385 | Msa1123830:intron | 30.0% | |
GGCTAATCTTAACAAATATC+GGG | + | chr7_3:74816597-74816616 | Msa1123830:CDS | 30.0% | |
TCTTTCCTTAAATCTTCACA+AGG | + | chr7_3:74816739-74816758 | Msa1123830:intron | 30.0% | |
AAACACCTTGTGAAGATTTA+AGG | - | chr7_3:74816747-74816766 | None:intergenic | 30.0% | |
AATATCTTCAACAGATCTGA+AGG | - | chr7_3:74816816-74816835 | None:intergenic | 30.0% | |
AGATCTGTTGAAGATATTCA+TGG | + | chr7_3:74816818-74816837 | Msa1123830:CDS | 30.0% | |
! | TATTCATGGATTAATGTGCA+TGG | + | chr7_3:74816832-74816851 | Msa1123830:CDS | 30.0% |
ATGAAAAAGAGCGAAATTTG+AGG | + | chr7_3:74817101-74817120 | Msa1123830:CDS | 30.0% | |
CAACAACACCAAATATTTGA+AGG | - | chr7_3:74817398-74817417 | None:intergenic | 30.0% | |
!! | CTTCAAATATTTGGTGTTGT+TGG | + | chr7_3:74817396-74817415 | Msa1123830:intron | 30.0% |
! | AATTTTTGCATTTCATGGGT+TGG | + | chr7_3:74817465-74817484 | Msa1123830:intron | 30.0% |
TACATTATTTCCTGAACCTT+TGG | + | chr7_3:74817529-74817548 | Msa1123830:intron | 30.0% | |
ATAACCAATTGCTTTAGTCT+CGG | + | chr7_3:74817685-74817704 | Msa1123830:intron | 30.0% | |
AAGCATTACAAACATAACGT+GGG | - | chr7_3:74817712-74817731 | None:intergenic | 30.0% | |
GAAAGACATTTACTATCTCT+TGG | + | chr7_3:74817774-74817793 | Msa1123830:CDS | 30.0% | |
TTAAGTACACATCAAACAGA+AGG | - | chr7_3:74818010-74818029 | None:intergenic | 30.0% | |
!! | ATTAATGTTATGGTGGATCA+TGG | + | chr7_3:74818266-74818285 | Msa1123830:intron | 30.0% |
! | TAGGATTTGGAATGATTAGT+TGG | + | chr7_3:74818290-74818309 | Msa1123830:intron | 30.0% |
! | AGGATTTGGAATGATTAGTT+GGG | + | chr7_3:74818291-74818310 | Msa1123830:intron | 30.0% |
! | ATTCGATTGTTGTTCAATCA+TGG | + | chr7_3:74818384-74818403 | Msa1123830:intron | 30.0% |
!! | TAACGGATTATTTCCATGTT+GGG | - | chr7_3:74818428-74818447 | None:intergenic | 30.0% |
!! | ATAACGGATTATTTCCATGT+TGG | - | chr7_3:74818429-74818448 | None:intergenic | 30.0% |
CATAGGTGCAAACAAAATAA+CGG | - | chr7_3:74818445-74818464 | None:intergenic | 30.0% | |
!!! | AGTTTTGATTGTTTCCTATC+AGG | - | chr7_3:74818697-74818716 | None:intergenic | 30.0% |
TGATAGGAAACAATCAAAAC+TGG | + | chr7_3:74818696-74818715 | Msa1123830:CDS | 30.0% | |
GATAGGAAACAATCAAAACT+GGG | + | chr7_3:74818697-74818716 | Msa1123830:CDS | 30.0% | |
! | CTCTTTCCTTTTCTCAATAA+TGG | - | chr7_3:74818788-74818807 | None:intergenic | 30.0% |
CATTATTGAGAAAAGGAAAG+AGG | + | chr7_3:74818786-74818805 | Msa1123830:CDS | 30.0% | |
GGAAAATTCAAAGAATCCAA+AGG | + | chr7_3:74819031-74819050 | Msa1123830:CDS | 30.0% | |
! | AAAATTTTGGATGGGTAGTA+TGG | - | chr7_3:74819291-74819310 | None:intergenic | 30.0% |
!! | AATAAAACTCTGCTTTTGAG+TGG | - | chr7_3:74819402-74819421 | None:intergenic | 30.0% |
! | ATGTCTAATGTTTTATCACG+TGG | + | chr7_3:74820142-74820161 | Msa1123830:intron | 30.0% |
! | TAATGTTTTATCACGTGGTT+TGG | + | chr7_3:74820147-74820166 | Msa1123830:intron | 30.0% |
AGAGTAAAATCCTAGAGATA+CGG | - | chr7_3:74820252-74820271 | None:intergenic | 30.0% | |
AAATAATCACAAGTCTGTGT+TGG | - | chr7_3:74820499-74820518 | None:intergenic | 30.0% | |
TACAAAGGATGATTATCTAC+TGG | - | chr7_3:74820641-74820660 | None:intergenic | 30.0% | |
! | TTCATATCAGACGAGTATTT+TGG | + | chr7_3:74821369-74821388 | Msa1123830:three_prime_UTR | 30.0% |
ATCGAAAATAAAAAGGTCTG+CGG | + | chr7_3:74821436-74821455 | Msa1123830:three_prime_UTR | 30.0% | |
! | CGACCCATTACAATTTTGTT+AGG | + | chr7_3:74814228-74814247 | Msa1123830:five_prime_UTR | 35.0% |
GGGCCTAACAAAATTGTAAT+GGG | - | chr7_3:74814234-74814253 | None:intergenic | 35.0% | |
TGGGCCTAACAAAATTGTAA+TGG | - | chr7_3:74814235-74814254 | None:intergenic | 35.0% | |
!! | TTGTTGCGTTAGGGTTTTAA+TGG | - | chr7_3:74814271-74814290 | None:intergenic | 35.0% |
!!! | TTATCGGTTTTGTTGCGTTA+GGG | - | chr7_3:74814280-74814299 | None:intergenic | 35.0% |
TCTTCTTCTTCTTCTCAAAC+TGG | - | chr7_3:74814332-74814351 | None:intergenic | 35.0% | |
ATCTGAACGTACTTTGTAAC+GGG | - | chr7_3:74814440-74814459 | None:intergenic | 35.0% | |
TCTTCTCCGATGAAATTATC+CGG | - | chr7_3:74814549-74814568 | None:intergenic | 35.0% | |
! | ATCACTATCTTTTGGTCATC+TGG | + | chr7_3:74815054-74815073 | Msa1123830:intron | 35.0% |
! | TTACAGAGTTGATCAATGTC+GGG | + | chr7_3:74815460-74815479 | Msa1123830:intron | 35.0% |
! | GATATCTTTTCGAAGTGATC+AGG | - | chr7_3:74815518-74815537 | None:intergenic | 35.0% |
AAGGAAAGGATAGATCTGAT+CGG | + | chr7_3:74815829-74815848 | Msa1123830:CDS | 35.0% | |
CCAGAGAAATTTAAACCATG+GGG | - | chr7_3:74815865-74815884 | None:intergenic | 35.0% | |
CCCAGAGAAATTTAAACCAT+GGG | - | chr7_3:74815866-74815885 | None:intergenic | 35.0% | |
CCCATGGTTTAAATTTCTCT+GGG | + | chr7_3:74815863-74815882 | Msa1123830:CDS | 35.0% | |
TCCCAGAGAAATTTAAACCA+TGG | - | chr7_3:74815867-74815886 | None:intergenic | 35.0% | |
! | AATTTCTCTGGGAAACTTAC+AGG | + | chr7_3:74815874-74815893 | Msa1123830:CDS | 35.0% |
ATTGCGGAACAATTCGAAAT+TGG | + | chr7_3:74815911-74815930 | Msa1123830:CDS | 35.0% | |
GGCCCAAAATTCTTCAATTT+CGG | + | chr7_3:74816013-74816032 | Msa1123830:intron | 35.0% | |
! | GGCCGAAATTGAAGAATTTT+GGG | - | chr7_3:74816018-74816037 | None:intergenic | 35.0% |
! | AGGCCGAAATTGAAGAATTT+TGG | - | chr7_3:74816019-74816038 | None:intergenic | 35.0% |
! | GTGTTACTGAATGGCAATTA+TGG | - | chr7_3:74816114-74816133 | None:intergenic | 35.0% |
TAATTGCCATTCAGTAACAC+TGG | + | chr7_3:74816114-74816133 | Msa1123830:intron | 35.0% | |
!! | ACTGTTTTACCTTTGTTGTC+TGG | + | chr7_3:74816207-74816226 | Msa1123830:intron | 35.0% |
!! | CTGTTTTACCTTTGTTGTCT+GGG | + | chr7_3:74816208-74816227 | Msa1123830:intron | 35.0% |
AAAATCTCACACTGCAATGA+TGG | - | chr7_3:74816265-74816284 | None:intergenic | 35.0% | |
CAGTGTTAGACATTTAGAAG+TGG | + | chr7_3:74816320-74816339 | Msa1123830:intron | 35.0% | |
GCTTATACTGCTTACAAAAC+TGG | - | chr7_3:74816531-74816550 | None:intergenic | 35.0% | |
AGATACAATTGCAAGCTTTC+AGG | - | chr7_3:74816652-74816671 | None:intergenic | 35.0% | |
GGTGTTTGTTTCATTGATGT+TGG | + | chr7_3:74816760-74816779 | Msa1123830:intron | 35.0% | |
TAGTAAACAGTCATCAAGGA+TGG | - | chr7_3:74816875-74816894 | None:intergenic | 35.0% | |
GACATAGTAAACAGTCATCA+AGG | - | chr7_3:74816879-74816898 | None:intergenic | 35.0% | |
AAAAGAGCGAAATTTGAGGA+TGG | + | chr7_3:74817105-74817124 | Msa1123830:CDS | 35.0% | |
CAAGCATTACAAACATAACG+TGG | - | chr7_3:74817713-74817732 | None:intergenic | 35.0% | |
GTTATGTTTGTAATGCTTGC+AGG | + | chr7_3:74817714-74817733 | Msa1123830:intron | 35.0% | |
GGAAAATGAATTTCTACCCT+CGG | + | chr7_3:74817795-74817814 | Msa1123830:CDS | 35.0% | |
AGTTCTCAATCTTCATCGAT+TGG | - | chr7_3:74818070-74818089 | None:intergenic | 35.0% | |
ATGAAGATTGAGAACTTAGC+TGG | + | chr7_3:74818074-74818093 | Msa1123830:CDS | 35.0% | |
TGAAGATTGAGAACTTAGCT+GGG | + | chr7_3:74818075-74818094 | Msa1123830:CDS | 35.0% | |
CGACTGAAAAATCGAAGAAA+GGG | - | chr7_3:74818106-74818125 | None:intergenic | 35.0% | |
ACGACTGAAAAATCGAAGAA+AGG | - | chr7_3:74818107-74818126 | None:intergenic | 35.0% | |
!! | TTTCTTCGATTTTTCAGTCG+TGG | + | chr7_3:74818106-74818125 | Msa1123830:CDS | 35.0% |
! | GGATTTGGAATGATTAGTTG+GGG | + | chr7_3:74818292-74818311 | Msa1123830:intron | 35.0% |
! | TGGTTTGACCATGTTATTTG+AGG | + | chr7_3:74818356-74818375 | Msa1123830:intron | 35.0% |
CTGAATCATTATTCCCAACA+TGG | + | chr7_3:74818412-74818431 | Msa1123830:intron | 35.0% | |
GTTGTTTACATAAACTCTCG+TGG | + | chr7_3:74818482-74818501 | Msa1123830:intron | 35.0% | |
ATAAACTCTCGTGGTTTAGA+TGG | + | chr7_3:74818491-74818510 | Msa1123830:intron | 35.0% | |
CAAGCAAATTCCGTAAGATT+TGG | - | chr7_3:74818580-74818599 | None:intergenic | 35.0% | |
! | CAAATCTTACGGAATTTGCT+TGG | + | chr7_3:74818578-74818597 | Msa1123830:intron | 35.0% |
CTGAACAATTGAATAAGGCA+AGG | + | chr7_3:74818656-74818675 | Msa1123830:CDS | 35.0% | |
! | AAATGATTTGTCCTCCTGAT+AGG | + | chr7_3:74818680-74818699 | Msa1123830:CDS | 35.0% |
TTTGATTGTTTCCTATCAGG+AGG | - | chr7_3:74818694-74818713 | None:intergenic | 35.0% | |
!!! | CAATAATGGATTTTCGAGCA+AGG | - | chr7_3:74818774-74818793 | None:intergenic | 35.0% |
TCAAAGAATCCAAAGGGAAA+AGG | + | chr7_3:74819038-74819057 | Msa1123830:CDS | 35.0% | |
TGAAAAGCTTTCAAGGAGAA+AGG | + | chr7_3:74819104-74819123 | Msa1123830:CDS | 35.0% | |
GAAAAGCTTTCAAGGAGAAA+GGG | + | chr7_3:74819105-74819124 | Msa1123830:CDS | 35.0% | |
TCAACTTACCCCTTCAATTA+CGG | - | chr7_3:74819139-74819158 | None:intergenic | 35.0% | |
ACCTAAAGAAACCCAATTAG+TGG | + | chr7_3:74819485-74819504 | Msa1123830:intron | 35.0% | |
ACCACTAATTGGGTTTCTTT+AGG | - | chr7_3:74819489-74819508 | None:intergenic | 35.0% | |
TGACAATACACACTATCTGT+AGG | + | chr7_3:74819573-74819592 | Msa1123830:intron | 35.0% | |
GACAATACACACTATCTGTA+GGG | + | chr7_3:74819574-74819593 | Msa1123830:intron | 35.0% | |
TCAAGGATTCCCTAGAAATT+TGG | - | chr7_3:74819600-74819619 | None:intergenic | 35.0% | |
! | TTCCAAATGATCCATGGTTT+TGG | - | chr7_3:74819689-74819708 | None:intergenic | 35.0% |
TGATATGCAGCATCAATTAG+CGG | - | chr7_3:74819736-74819755 | None:intergenic | 35.0% | |
! | ACACATTTTTCCTCTCAAGT+TGG | + | chr7_3:74819842-74819861 | Msa1123830:intron | 35.0% |
! | AGATTTTGTTCCAACTTGAG+AGG | - | chr7_3:74819855-74819874 | None:intergenic | 35.0% |
TAGGCTACTCTTCTATATCT+TGG | + | chr7_3:74820045-74820064 | Msa1123830:intron | 35.0% | |
! | TCAATAGGTTGAAGAAAGAC+AGG | + | chr7_3:74820221-74820240 | Msa1123830:CDS | 35.0% |
! | CAATAGGTTGAAGAAAGACA+GGG | + | chr7_3:74820222-74820241 | Msa1123830:CDS | 35.0% |
TTAGTAAATGTCTGTTGCTC+TGG | + | chr7_3:74820588-74820607 | Msa1123830:intron | 35.0% | |
! | TACTGGTTGTGTGTAAAAGA+TGG | - | chr7_3:74820624-74820643 | None:intergenic | 35.0% |
TGAGAGAAAAAAGAAGGAAC+AGG | + | chr7_3:74820697-74820716 | Msa1123830:CDS | 35.0% | |
CTATCTCATCCAATTTAGCT+TGG | - | chr7_3:74820730-74820749 | None:intergenic | 35.0% | |
AAATTGAAGAAAAGGCTGAG+AGG | + | chr7_3:74820777-74820796 | Msa1123830:CDS | 35.0% | |
AATTGAAGAAAAGGCTGAGA+GGG | + | chr7_3:74820778-74820797 | Msa1123830:CDS | 35.0% | |
GATCGTAATTCTTCCTCATT+TGG | + | chr7_3:74821034-74821053 | Msa1123830:CDS | 35.0% | |
! | AATTCTTCCTCATTTGGTTC+TGG | + | chr7_3:74821040-74821059 | Msa1123830:CDS | 35.0% |
GCAAAATGAGCAGTAAATCA+CGG | - | chr7_3:74821135-74821154 | None:intergenic | 35.0% | |
TCCAATGTTTATGAACTCCT+TGG | + | chr7_3:74821276-74821295 | Msa1123830:three_prime_UTR | 35.0% | |
ACCAAGGAGTTCATAAACAT+TGG | - | chr7_3:74821280-74821299 | None:intergenic | 35.0% | |
ATGTTCCATTTATGATCCAG+TGG | + | chr7_3:74821324-74821343 | Msa1123830:three_prime_UTR | 35.0% | |
TGTTCCATTTATGATCCAGT+GGG | + | chr7_3:74821325-74821344 | Msa1123830:three_prime_UTR | 35.0% | |
!!! | CTTATCGGTTTTGTTGCGTT+AGG | - | chr7_3:74814281-74814300 | None:intergenic | 40.0% |
!! | CTTTTGCTTTGTTGCGAACA+GGG | - | chr7_3:74814374-74814393 | None:intergenic | 40.0% |
TGGTTGTCGATGAAAAACAG+TGG | - | chr7_3:74814413-74814432 | None:intergenic | 40.0% | |
CATTCTCGATTATGCGATTC+CGG | + | chr7_3:74814491-74814510 | Msa1123830:intron | 40.0% | |
CAAATTGAATCGCGCAATCT+CGG | - | chr7_3:74814593-74814612 | None:intergenic | 40.0% | |
AATGCTCTCAAAAGAGCAGA+AGG | + | chr7_3:74815336-74815355 | Msa1123830:CDS | 40.0% | |
! | CTTTGTGTTGACATGAGGAA+AGG | + | chr7_3:74815585-74815604 | Msa1123830:CDS | 40.0% |
GCAAGTGAATGTTAGTTCAC+TGG | + | chr7_3:74815653-74815672 | Msa1123830:CDS | 40.0% | |
AGTGAATGTTAGTTCACTGG+AGG | + | chr7_3:74815656-74815675 | Msa1123830:CDS | 40.0% | |
! | ATGACTTGGAGGCTGATAAA+AGG | + | chr7_3:74815769-74815788 | Msa1123830:CDS | 40.0% |
TTGATGCTGAGCTATGTTAG+TGG | + | chr7_3:74815801-74815820 | Msa1123830:CDS | 40.0% | |
AGGAAAGGATAGATCTGATC+GGG | + | chr7_3:74815830-74815849 | Msa1123830:CDS | 40.0% | |
CCCCATGGTTTAAATTTCTC+TGG | + | chr7_3:74815862-74815881 | Msa1123830:CDS | 40.0% | |
!! | GTTGCTTGCAGTGTTGTTTA+TGG | + | chr7_3:74815986-74816005 | Msa1123830:intron | 40.0% |
!! | GAGCATTGACCACATCAATA+TGG | - | chr7_3:74816077-74816096 | None:intergenic | 40.0% |
GAATGGCAATTATGGCAGTA+TGG | - | chr7_3:74816106-74816125 | None:intergenic | 40.0% | |
! | ACCTTTGTTGTCTGGGAATA+TGG | + | chr7_3:74816215-74816234 | Msa1123830:intron | 40.0% |
ACCATATTCCCAGACAACAA+AGG | - | chr7_3:74816219-74816238 | None:intergenic | 40.0% | |
TTGTCTGGGAATATGGTCTT+GGG | + | chr7_3:74816222-74816241 | Msa1123830:intron | 40.0% | |
GTTAGACATTTAGAAGTGGC+AGG | + | chr7_3:74816324-74816343 | Msa1123830:intron | 40.0% | |
ACAAAACTGGAAAGCTCGAT+GGG | - | chr7_3:74816518-74816537 | None:intergenic | 40.0% | |
TACAAAACTGGAAAGCTCGA+TGG | - | chr7_3:74816519-74816538 | None:intergenic | 40.0% | |
CCTGCATGCAACAAAAAATC+AGG | - | chr7_3:74816790-74816809 | None:intergenic | 40.0% | |
!!! | CCTGATTTTTTGTTGCATGC+AGG | + | chr7_3:74816787-74816806 | Msa1123830:intron | 40.0% |
! | ACAGTCATCAAGGATGGTTT+TGG | - | chr7_3:74816869-74816888 | None:intergenic | 40.0% |
TTGAGGATGGCTAATCTCAT+AGG | + | chr7_3:74817118-74817137 | Msa1123830:CDS | 40.0% | |
AATACCACTTCTCTGCTATC+AGG | - | chr7_3:74817163-74817182 | None:intergenic | 40.0% | |
TATTTCCTGAACCTTTGGTG+TGG | + | chr7_3:74817534-74817553 | Msa1123830:intron | 40.0% | |
TAATGCTTGCAGGCTTCAAA+GGG | + | chr7_3:74817724-74817743 | Msa1123830:intron | 40.0% | |
! | ACTTTTAGTGCAAGATCCGA+GGG | - | chr7_3:74817814-74817833 | None:intergenic | 40.0% |
! | TACTTTTAGTGCAAGATCCG+AGG | - | chr7_3:74817815-74817834 | None:intergenic | 40.0% |
TACTGAGAAAATTGCACCTC+TGG | - | chr7_3:74817898-74817917 | None:intergenic | 40.0% | |
!!! | TAGCCAACTTTTCAAGTGCT+GGG | - | chr7_3:74817924-74817943 | None:intergenic | 40.0% |
TTGAAAAGTTGGCTACCTTG+AGG | + | chr7_3:74817929-74817948 | Msa1123830:CDS | 40.0% | |
AAACATTAGACACCTGAGGA+GGG | - | chr7_3:74818046-74818065 | None:intergenic | 40.0% | |
TAAACATTAGACACCTGAGG+AGG | - | chr7_3:74818047-74818066 | None:intergenic | 40.0% | |
TGGTAAACATTAGACACCTG+AGG | - | chr7_3:74818050-74818069 | None:intergenic | 40.0% | |
!! | TGTTATGGTGGATCATGGAT+AGG | + | chr7_3:74818271-74818290 | Msa1123830:intron | 40.0% |
! | TTTGGAATGATTAGTTGGGG+CGG | + | chr7_3:74818295-74818314 | Msa1123830:intron | 40.0% |
GGCACATATTACTGAGAAGA+TGG | + | chr7_3:74818316-74818335 | Msa1123830:intron | 40.0% | |
TTATCCTAGGCATCTGACAT+AGG | - | chr7_3:74818462-74818481 | None:intergenic | 40.0% | |
AGAACGACAGCTTCTTGAAA+AGG | + | chr7_3:74818813-74818832 | Msa1123830:CDS | 40.0% | |
!! | TGAAATTTTGAAGGAACGCG+AGG | + | chr7_3:74818930-74818949 | Msa1123830:intron | 40.0% |
TTGATGAAGAAGCAGAGCAA+AGG | + | chr7_3:74818983-74819002 | Msa1123830:CDS | 40.0% | |
AAGAATCCAAAGGGAAAAGG+AGG | + | chr7_3:74819041-74819060 | Msa1123830:CDS | 40.0% | |
AAGAGATAAAGAAGAAGCCG+AGG | + | chr7_3:74819065-74819084 | Msa1123830:CDS | 40.0% | |
TGGAAGCTGAAAAGCTTTCA+AGG | + | chr7_3:74819097-74819116 | Msa1123830:CDS | 40.0% | |
GCAAAAAGCCCGTAATTGAA+GGG | + | chr7_3:74819127-74819146 | Msa1123830:CDS | 40.0% | |
CAAAAAGCCCGTAATTGAAG+GGG | + | chr7_3:74819128-74819147 | Msa1123830:CDS | 40.0% | |
CAACTTACCCCTTCAATTAC+GGG | - | chr7_3:74819138-74819157 | None:intergenic | 40.0% | |
! | GGATGCTCTAAATTGAATGC+AGG | - | chr7_3:74819164-74819183 | None:intergenic | 40.0% |
CAGAATGGACACCACTAATT+GGG | - | chr7_3:74819499-74819518 | None:intergenic | 40.0% | |
TCAGAATGGACACCACTAAT+TGG | - | chr7_3:74819500-74819519 | None:intergenic | 40.0% | |
ATCTGTAGGGCCAAATTTCT+AGG | + | chr7_3:74819587-74819606 | Msa1123830:intron | 40.0% | |
TCTGTAGGGCCAAATTTCTA+GGG | + | chr7_3:74819588-74819607 | Msa1123830:intron | 40.0% | |
GGAGAAGAAGCTTCAGAAAT+TGG | + | chr7_3:74819663-74819682 | Msa1123830:CDS | 40.0% | |
TCAGAAATTGGCCAAAACCA+TGG | + | chr7_3:74819675-74819694 | Msa1123830:CDS | 40.0% | |
TGCTCTTTCCAAATGATCCA+TGG | - | chr7_3:74819695-74819714 | None:intergenic | 40.0% | |
TATGTCTACTTGTGTTCCCT+TGG | + | chr7_3:74819803-74819822 | Msa1123830:intron | 40.0% | |
CCTCTAGCTGCATAAAACAA+TGG | - | chr7_3:74819933-74819952 | None:intergenic | 40.0% | |
!! | CCATTGTTTTATGCAGCTAG+AGG | + | chr7_3:74819930-74819949 | Msa1123830:intron | 40.0% |
!!! | TCTCTAGGATTTTACTCTCC+AGG | + | chr7_3:74820254-74820273 | Msa1123830:CDS | 40.0% |
! | GATTTTACTCTCCAGGAAAC+TGG | + | chr7_3:74820261-74820280 | Msa1123830:CDS | 40.0% |
TAATCACAAGTCTGTGTTGG+CGG | - | chr7_3:74820496-74820515 | None:intergenic | 40.0% | |
!!! | TTCTTTTTTCTCTCAGCCTC+TGG | - | chr7_3:74820692-74820711 | None:intergenic | 40.0% |
AGAGGCTGAGAGAAAAAAGA+AGG | + | chr7_3:74820691-74820710 | Msa1123830:intron | 40.0% | |
GTTCAAGGTCATCTTCAACT+TGG | + | chr7_3:74821068-74821087 | Msa1123830:CDS | 40.0% | |
! | TTACTGCTCATTTTGCCCTT+TGG | + | chr7_3:74821139-74821158 | Msa1123830:three_prime_UTR | 40.0% |
! | TACTGCTCATTTTGCCCTTT+GGG | + | chr7_3:74821140-74821159 | Msa1123830:three_prime_UTR | 40.0% |
CAATCCCACTGGATCATAAA+TGG | - | chr7_3:74821332-74821351 | None:intergenic | 40.0% | |
CATTTATGATCCAGTGGGAT+TGG | + | chr7_3:74821330-74821349 | Msa1123830:three_prime_UTR | 40.0% | |
!! | AAATTGTAATGGGTCGGGCT+TGG | - | chr7_3:74814224-74814243 | None:intergenic | 45.0% |
!! | GCTTTTGCTTTGTTGCGAAC+AGG | - | chr7_3:74814375-74814394 | None:intergenic | 45.0% |
GTTCGCAACAAAGCAAAAGC+TGG | + | chr7_3:74814375-74814394 | Msa1123830:five_prime_UTR | 45.0% | |
GCAACAAAGCAAAAGCTGGA+CGG | + | chr7_3:74814379-74814398 | Msa1123830:five_prime_UTR | 45.0% | |
!! | CGTACTTTGTAACGGGTTTG+TGG | - | chr7_3:74814433-74814452 | None:intergenic | 45.0% |
TGTGCGCCGGATAATTTCAT+CGG | + | chr7_3:74814540-74814559 | Msa1123830:intron | 45.0% | |
!!! | GCTCTTTTGAGAGCATTCTC+AGG | - | chr7_3:74815333-74815352 | None:intergenic | 45.0% |
CTTCGAAAAGATATCGCGCA+TGG | + | chr7_3:74815523-74815542 | Msa1123830:CDS | 45.0% | |
! | TCGAGCTTTGTGTTGACATG+AGG | + | chr7_3:74815580-74815599 | Msa1123830:CDS | 45.0% |
GAATGTTAGTTCACTGGAGG+AGG | + | chr7_3:74815659-74815678 | Msa1123830:CDS | 45.0% | |
CTCCAAGTCATCCACATCAA+GGG | - | chr7_3:74815760-74815779 | None:intergenic | 45.0% | |
AGCTATGTTAGTGGCGAGAA+AGG | + | chr7_3:74815810-74815829 | Msa1123830:CDS | 45.0% | |
TGTTAGTGGCGAGAAAGGAA+AGG | + | chr7_3:74815815-74815834 | Msa1123830:CDS | 45.0% | |
GGACAGTGCTTGAGATATTG+CGG | + | chr7_3:74815895-74815914 | Msa1123830:CDS | 45.0% | |
!! | GCTTGCAGTGTTGTTTATGG+CGG | + | chr7_3:74815989-74816008 | Msa1123830:intron | 45.0% |
CTTCAATTTCGGCCTCCTTA+TGG | + | chr7_3:74816024-74816043 | Msa1123830:intron | 45.0% | |
GCAATTATGGCAGTATGGTG+TGG | - | chr7_3:74816101-74816120 | None:intergenic | 45.0% | |
! | GAGCAACCAGTGTTACTGAA+TGG | - | chr7_3:74816123-74816142 | None:intergenic | 45.0% |
GTTGTCTGGGAATATGGTCT+TGG | + | chr7_3:74816221-74816240 | Msa1123830:intron | 45.0% | |
TTGCCACTGAACTTGAACTC+TGG | + | chr7_3:74816698-74816717 | Msa1123830:CDS | 45.0% | |
! | ACTACTGGGAGTGCAAATGA+GGG | - | chr7_3:74817193-74817212 | None:intergenic | 45.0% |
! | TACTACTGGGAGTGCAAATG+AGG | - | chr7_3:74817194-74817213 | None:intergenic | 45.0% |
ACCAGTTCAGCAAGAAGTGA+CGG | - | chr7_3:74817287-74817306 | None:intergenic | 45.0% | |
!! | CATTTCATGGGTTGGTTGTG+TGG | + | chr7_3:74817473-74817492 | Msa1123830:intron | 45.0% |
TTCAGGGGTTGGATAACATC+TGG | + | chr7_3:74817639-74817658 | Msa1123830:intron | 45.0% | |
TCAGGGGTTGGATAACATCT+GGG | + | chr7_3:74817640-74817659 | Msa1123830:intron | 45.0% | |
GTAATGCTTGCAGGCTTCAA+AGG | + | chr7_3:74817723-74817742 | Msa1123830:intron | 45.0% | |
TGTCCCAGCACTTGAAAAGT+TGG | + | chr7_3:74817918-74817937 | Msa1123830:CDS | 45.0% | |
!!! | GTAGCCAACTTTTCAAGTGC+TGG | - | chr7_3:74817925-74817944 | None:intergenic | 45.0% |
TACCTTGAGGTTGCTACAAC+AGG | + | chr7_3:74817942-74817961 | Msa1123830:CDS | 45.0% | |
GGTGGATCATGGATAGGATT+TGG | + | chr7_3:74818277-74818296 | Msa1123830:intron | 45.0% | |
TCTCAGAGTCTTGAAGCTGA+TGG | + | chr7_3:74818607-74818626 | Msa1123830:intron | 45.0% | |
TCTTGAAGCTGATGGCTTGA+GGG | + | chr7_3:74818615-74818634 | Msa1123830:CDS | 45.0% | |
ATTGCTCCCAACTTTGTCAG+AGG | + | chr7_3:74818723-74818742 | Msa1123830:CDS | 45.0% | |
CCACAACCTCTGACAAAGTT+GGG | - | chr7_3:74818732-74818751 | None:intergenic | 45.0% | |
TTGTGGCCAAAGAACACAAG+AGG | + | chr7_3:74818746-74818765 | Msa1123830:CDS | 45.0% | |
AAGGAGCCTCTTGTGTTCTT+TGG | - | chr7_3:74818755-74818774 | None:intergenic | 45.0% | |
!! | AATTTTGAAGGAACGCGAGG+AGG | + | chr7_3:74818933-74818952 | Msa1123830:intron | 45.0% |
ATGAAGAAGCAGAGCAAAGG+CGG | + | chr7_3:74818986-74819005 | Msa1123830:CDS | 45.0% | |
TTGCAACTGAGATTGAGCAG+AGG | + | chr7_3:74819010-74819029 | Msa1123830:CDS | 45.0% | |
! | CTCTTTCCTCCTTTTCCCTT+TGG | - | chr7_3:74819050-74819069 | None:intergenic | 45.0% |
GGCAAAAAGCCCGTAATTGA+AGG | + | chr7_3:74819126-74819145 | Msa1123830:CDS | 45.0% | |
GTATGCACAGCTTGTCAGAA+TGG | - | chr7_3:74819514-74819533 | None:intergenic | 45.0% | |
ATCCTTGATGCAGTTGACGT+TGG | + | chr7_3:74819612-74819631 | Msa1123830:CDS | 45.0% | |
GGCCAAAACCATGGATCATT+TGG | + | chr7_3:74819684-74819703 | Msa1123830:CDS | 45.0% | |
GGAAAGAGCAAAGAGAGAAG+AGG | + | chr7_3:74819705-74819724 | Msa1123830:CDS | 45.0% | |
TGCATATCAGCAGCGATTAG+TGG | + | chr7_3:74819747-74819766 | Msa1123830:CDS | 45.0% | |
TCTCATTGAGATCTCCAGCA+TGG | - | chr7_3:74819975-74819994 | None:intergenic | 45.0% | |
TGCTGGAGATCTCAATGAGA+AGG | + | chr7_3:74819975-74819994 | Msa1123830:CDS | 45.0% | |
GAGATCTCAATGAGAAGGAG+AGG | + | chr7_3:74819980-74819999 | Msa1123830:CDS | 45.0% | |
GAGAGGCTTAGTCGAATGAT+GGG | + | chr7_3:74819997-74820016 | Msa1123830:CDS | 45.0% | |
!! | ATCACGTGGTTTGGCTTTAC+AGG | + | chr7_3:74820156-74820175 | Msa1123830:intron | 45.0% |
ACCTATTGAATTCCGCTTCG+CGG | - | chr7_3:74820210-74820229 | None:intergenic | 45.0% | |
! | TAGGTTGAAGAAAGACAGGG+AGG | + | chr7_3:74820225-74820244 | Msa1123830:CDS | 45.0% |
GAGAAGACAGAAATTGCGTG+AGG | + | chr7_3:74820333-74820352 | Msa1123830:CDS | 45.0% | |
AAGACAGAAATTGCGTGAGG+AGG | + | chr7_3:74820336-74820355 | Msa1123830:CDS | 45.0% | |
ATGATATGGGGGAAAACGCT+TGG | - | chr7_3:74820422-74820441 | None:intergenic | 45.0% | |
!! | ATGTCTGTTGCTCTGGAATC+AGG | + | chr7_3:74820595-74820614 | Msa1123830:intron | 45.0% |
!! | TGTCTGTTGCTCTGGAATCA+GGG | + | chr7_3:74820596-74820615 | Msa1123830:intron | 45.0% |
! | GTGGTTTTTCTGAACTCCAG+AGG | + | chr7_3:74820673-74820692 | Msa1123830:intron | 45.0% |
!! | GAGAAGAGGGAAGCATTGTT+GGG | + | chr7_3:74820800-74820819 | Msa1123830:CDS | 45.0% |
AACTTGGGAACGTATTTCCC+TGG | - | chr7_3:74820923-74820942 | None:intergenic | 45.0% | |
GGAAATACGTTCCCAAGTTC+CGG | + | chr7_3:74820924-74820943 | Msa1123830:CDS | 45.0% | |
!! | TCTTCCTCATTTGGTTCTGG+TGG | + | chr7_3:74821043-74821062 | Msa1123830:CDS | 45.0% |
!! | CTTCCTCATTTGGTTCTGGT+GGG | + | chr7_3:74821044-74821063 | Msa1123830:CDS | 45.0% |
!! | TTCCTCATTTGGTTCTGGTG+GGG | + | chr7_3:74821045-74821064 | Msa1123830:CDS | 45.0% |
CTTCAACTTGGTCATCTTCC+AGG | + | chr7_3:74821080-74821099 | Msa1123830:CDS | 45.0% | |
! | ACTGCTCATTTTGCCCTTTG+GGG | + | chr7_3:74821141-74821160 | Msa1123830:three_prime_UTR | 45.0% |
TATCAGGCAAGAACCCCAAA+GGG | - | chr7_3:74821157-74821176 | None:intergenic | 45.0% | |
ATATCAGGCAAGAACCCCAA+AGG | - | chr7_3:74821158-74821177 | None:intergenic | 45.0% | |
GTTCTTGCCTGATATTGTGC+TGG | + | chr7_3:74821163-74821182 | Msa1123830:three_prime_UTR | 45.0% | |
AGAGCAACCAGCACAATATC+AGG | - | chr7_3:74821173-74821192 | None:intergenic | 45.0% | |
CGTGTTCTTCAACAGAACCA+AGG | - | chr7_3:74821296-74821315 | None:intergenic | 45.0% | |
TGATCCAGTGGGATTGGATA+CGG | + | chr7_3:74821336-74821355 | Msa1123830:three_prime_UTR | 45.0% | |
ATTACCGTATCCAATCCCAC+TGG | - | chr7_3:74821343-74821362 | None:intergenic | 45.0% | |
!! | CAAAAATAAAAAATTTATAT+AGG | - | chr7_3:74817352-74817371 | None:intergenic | 5.0% |
!! | ATAATAATTAATAAACTAAA+AGG | - | chr7_3:74818845-74818864 | None:intergenic | 5.0% |
AAAGCTCAGCGGCTGCTTAT+CGG | - | chr7_3:74814296-74814315 | None:intergenic | 50.0% | |
! | GTGTTGACATGAGGAAAGGC+CGG | + | chr7_3:74815589-74815608 | Msa1123830:CDS | 50.0% |
!! | AAAGGCCGGTTTGCTAAGGA+TGG | + | chr7_3:74815603-74815622 | Msa1123830:CDS | 50.0% |
TGAGGCCATCCTTAGCAAAC+CGG | - | chr7_3:74815611-74815630 | None:intergenic | 50.0% | |
AGCTGAACAAGCACGTAGTC+AGG | + | chr7_3:74815716-74815735 | Msa1123830:CDS | 50.0% | |
CACATCAAGGGCTTCTTCCA+AGG | - | chr7_3:74815748-74815767 | None:intergenic | 50.0% | |
CTTGGAAGAAGCCCTTGATG+TGG | + | chr7_3:74815746-74815765 | Msa1123830:CDS | 50.0% | |
AGCCCTTGATGTGGATGACT+TGG | + | chr7_3:74815755-74815774 | Msa1123830:CDS | 50.0% | |
CCTCCAAGTCATCCACATCA+AGG | - | chr7_3:74815761-74815780 | None:intergenic | 50.0% | |
! | CCTTGATGTGGATGACTTGG+AGG | + | chr7_3:74815758-74815777 | Msa1123830:CDS | 50.0% |
TAGCTCAGCATCAAGTCCTC+TGG | - | chr7_3:74815795-74815814 | None:intergenic | 50.0% | |
!! | TGCAGTGTTGTTTATGGCGG+AGG | + | chr7_3:74815992-74816011 | Msa1123830:intron | 50.0% |
!! | GATGGGCTGTCATCTGCATA+TGG | - | chr7_3:74816501-74816520 | None:intergenic | 50.0% |
CTTTCAGGAGCAGAAAGGTC+AGG | - | chr7_3:74816637-74816656 | None:intergenic | 50.0% | |
GCAAGCTTTCAGGAGCAGAA+AGG | - | chr7_3:74816642-74816661 | None:intergenic | 50.0% | |
! | CTGCCAGAGTTCAAGTTCAG+TGG | - | chr7_3:74816704-74816723 | None:intergenic | 50.0% |
CACTGAACTTGAACTCTGGC+AGG | + | chr7_3:74816702-74816721 | Msa1123830:CDS | 50.0% | |
GAACTTGAACTCTGGCAGGT+TGG | + | chr7_3:74816706-74816725 | Msa1123830:intron | 50.0% | |
CACTTCTCTGCTATCAGGCT+TGG | - | chr7_3:74817158-74817177 | None:intergenic | 50.0% | |
CAAGCCTGATAGCAGAGAAG+TGG | + | chr7_3:74817156-74817175 | Msa1123830:CDS | 50.0% | |
TTGTCTTTCCCCAGCTCTCA+AGG | + | chr7_3:74817261-74817280 | Msa1123830:intron | 50.0% | |
! | TCCTGAACCTTTGGTGTGGT+TGG | + | chr7_3:74817538-74817557 | Msa1123830:intron | 50.0% |
! | CCTGAACCTTTGGTGTGGTT+GGG | + | chr7_3:74817539-74817558 | Msa1123830:intron | 50.0% |
GGGACCGAGACTAAAGCAAT+TGG | - | chr7_3:74817692-74817711 | None:intergenic | 50.0% | |
!! | CTCTGGAACAGATGAAGCGA+AGG | - | chr7_3:74817881-74817900 | None:intergenic | 50.0% |
CTTCGCTTCATCTGTTCCAG+AGG | + | chr7_3:74817879-74817898 | Msa1123830:CDS | 50.0% | |
CACCTGTTGTAGCAACCTCA+AGG | - | chr7_3:74817947-74817966 | None:intergenic | 50.0% | |
ATTAGACACCTGAGGAGGGA+AGG | - | chr7_3:74818042-74818061 | None:intergenic | 50.0% | |
TGCACCTATGTCAGATGCCT+AGG | + | chr7_3:74818455-74818474 | Msa1123830:intron | 50.0% | |
GTCTTGAAGCTGATGGCTTG+AGG | + | chr7_3:74818614-74818633 | Msa1123830:CDS | 50.0% | |
TGATGGCTTGAGGGATCACT+TGG | + | chr7_3:74818624-74818643 | Msa1123830:CDS | 50.0% | |
CCCAACTTTGTCAGAGGTTG+TGG | + | chr7_3:74818729-74818748 | Msa1123830:CDS | 50.0% | |
GCCACAACCTCTGACAAAGT+TGG | - | chr7_3:74818733-74818752 | None:intergenic | 50.0% | |
AGCTTCCAGACGTAAAGCCT+CGG | - | chr7_3:74819085-74819104 | None:intergenic | 50.0% | |
GACCAACGTCAACTGCATCA+AGG | - | chr7_3:74819617-74819636 | None:intergenic | 50.0% | |
TGACGTTGGTCGAACAACTC+CGG | + | chr7_3:74819626-74819645 | Msa1123830:CDS | 50.0% | |
TCTCCATTTCCTGTCTCTCC+CGG | - | chr7_3:74819648-74819667 | None:intergenic | 50.0% | |
AGCAGCGATTAGTGGAAGAG+AGG | + | chr7_3:74819755-74819774 | Msa1123830:CDS | 50.0% | |
GGAGAGGCTTAGTCGAATGA+TGG | + | chr7_3:74819996-74820015 | Msa1123830:CDS | 50.0% | |
ACCGCGAAGCGGAATTCAAT+AGG | + | chr7_3:74820206-74820225 | Msa1123830:CDS | 50.0% | |
TACTCTCCAGGAAACTGGAG+AGG | + | chr7_3:74820266-74820285 | Msa1123830:CDS | 50.0% | |
ACTCTCCAGGAAACTGGAGA+GGG | + | chr7_3:74820267-74820286 | Msa1123830:CDS | 50.0% | |
! | CTTTTCCCTCTCCAGTTTCC+TGG | - | chr7_3:74820275-74820294 | None:intergenic | 50.0% |
GGCTGAACGCCAAGCTAAAT+TGG | + | chr7_3:74820718-74820737 | Msa1123830:CDS | 50.0% | |
AAAAGGCTGAGAGGGAGAAG+AGG | + | chr7_3:74820786-74820805 | Msa1123830:CDS | 50.0% | |
AAAGGCTGAGAGGGAGAAGA+GGG | + | chr7_3:74820787-74820806 | Msa1123830:CDS | 50.0% | |
!! | GGAGAAGAGGGAAGCATTGT+TGG | + | chr7_3:74820799-74820818 | Msa1123830:CDS | 50.0% |
AACGTATTTCCCTGGAGCTG+GGG | - | chr7_3:74820915-74820934 | None:intergenic | 50.0% | |
GAACGTATTTCCCTGGAGCT+GGG | - | chr7_3:74820916-74820935 | None:intergenic | 50.0% | |
GAGGAGGAGGTGAAACAACA+GGG | + | chr7_3:74820948-74820967 | Msa1123830:CDS | 50.0% | |
AGGAGGAGGTGAAACAACAG+GGG | + | chr7_3:74820949-74820968 | Msa1123830:CDS | 50.0% | |
TCCTCCAGAAGCAGATCGTT+GGG | + | chr7_3:74820976-74820995 | Msa1123830:CDS | 50.0% | |
TTACCCCAACGATCTGCTTC+TGG | - | chr7_3:74820983-74821002 | None:intergenic | 50.0% | |
!! | TCCTCATTTGGTTCTGGTGG+GGG | + | chr7_3:74821046-74821065 | Msa1123830:CDS | 50.0% |
TCAAGTACGATCACGCATCC+TGG | - | chr7_3:74821101-74821120 | None:intergenic | 50.0% | |
AAAAAGGTCTGCGGCCTTCT+TGG | + | chr7_3:74821445-74821464 | Msa1123830:three_prime_UTR | 50.0% | |
GCAAGTGCGCAAAAGCTCAG+CGG | - | chr7_3:74814307-74814326 | None:intergenic | 55.0% | |
CGTTTCCCGGCCGTTGTAAA+AGG | + | chr7_3:74814516-74814535 | Msa1123830:intron | 55.0% | |
! | CACAGCCTTTTACAACGGCC+GGG | - | chr7_3:74814524-74814543 | None:intergenic | 55.0% |
! | GCACAGCCTTTTACAACGGC+CGG | - | chr7_3:74814525-74814544 | None:intergenic | 55.0% |
! | CGGCGCACAGCCTTTTACAA+CGG | - | chr7_3:74814529-74814548 | None:intergenic | 55.0% |
CGTTGTAAAAGGCTGTGCGC+CGG | + | chr7_3:74814527-74814546 | Msa1123830:intron | 55.0% | |
GCAATCTCGGAATTGCGTCG+CGG | - | chr7_3:74814580-74814599 | None:intergenic | 55.0% | |
GATCAATGTCGGGCAGAAGC+AGG | + | chr7_3:74815470-74815489 | Msa1123830:CDS | 55.0% | |
TCGCGCATGGCAGAAAACAC+TGG | + | chr7_3:74815536-74815555 | Msa1123830:CDS | 55.0% | |
!! | GAGGAAAGGCCGGTTTGCTA+AGG | + | chr7_3:74815599-74815618 | Msa1123830:CDS | 55.0% |
ACAAGCACGTAGTCAGGCTC+AGG | + | chr7_3:74815722-74815741 | Msa1123830:CDS | 55.0% | |
GGAGGCTGATAAAAGGCCAG+AGG | + | chr7_3:74815776-74815795 | Msa1123830:CDS | 55.0% | |
!! | ATCGGGAGCTTGTTACCCCA+TGG | + | chr7_3:74815847-74815866 | Msa1123830:CDS | 55.0% |
ATTTCGGCCTCCTTATGGCG+CGG | + | chr7_3:74816029-74816048 | Msa1123830:intron | 55.0% | |
AAAGGTCAGGTCGGTCTCGT+TGG | - | chr7_3:74816624-74816643 | None:intergenic | 55.0% | |
CAGGAGCAGAAAGGTCAGGT+CGG | - | chr7_3:74816633-74816652 | None:intergenic | 55.0% | |
CCTCCTCATGATCGCACTCA+CGG | + | chr7_3:74817055-74817074 | Msa1123830:CDS | 55.0% | |
AAGTGACGGCCTTGAGAGCT+GGG | - | chr7_3:74817273-74817292 | None:intergenic | 55.0% | |
GCCGTCACTTCTTGCTGAAC+TGG | + | chr7_3:74817283-74817302 | Msa1123830:CDS | 55.0% | |
CCCAACCACACCAAAGGTTC+AGG | - | chr7_3:74817542-74817561 | None:intergenic | 55.0% | |
TGTGTGCCCAACCACACCAA+AGG | - | chr7_3:74817548-74817567 | None:intergenic | 55.0% | |
GCTCTGTAAGGTTCAGGGGT+TGG | + | chr7_3:74817628-74817647 | Msa1123830:intron | 55.0% | |
AACGCGAGGAGGAGTCAAAG+AGG | + | chr7_3:74818944-74818963 | Msa1123830:CDS | 55.0% | |
AGAAGCCGAGGCTTTACGTC+TGG | + | chr7_3:74819077-74819096 | Msa1123830:CDS | 55.0% | |
ACCGTTGCTCTGCATGGGTA+CGG | + | chr7_3:74819448-74819467 | Msa1123830:intron | 55.0% | |
GACGTTGGTCGAACAACTCC+GGG | + | chr7_3:74819627-74819646 | Msa1123830:CDS | 55.0% | |
ACTCCGGGAGAGACAGGAAA+TGG | + | chr7_3:74819642-74819661 | Msa1123830:CDS | 55.0% | |
AGTTGTGAGTCACCGCGAAG+CGG | + | chr7_3:74820195-74820214 | Msa1123830:CDS | 55.0% | |
ACAGGGAGGACCGTATCTCT+AGG | + | chr7_3:74820239-74820258 | Msa1123830:CDS | 55.0% | |
TGCGTGAGGAGGAAGAAGCT+CGG | + | chr7_3:74820347-74820366 | Msa1123830:CDS | 55.0% | |
GACCTGCTGAACCAGCTCTT+AGG | + | chr7_3:74820825-74820844 | Msa1123830:CDS | 55.0% | |
GGCTCATAAGGCCTAAGAGC+TGG | - | chr7_3:74820839-74820858 | None:intergenic | 55.0% | |
CAGTGCCAGGATCAACTGGA+CGG | - | chr7_3:74820868-74820887 | None:intergenic | 55.0% | |
GGAACGTATTTCCCTGGAGC+TGG | - | chr7_3:74820917-74820936 | None:intergenic | 55.0% | |
TTGTTTCACCTCCTCCTCGC+CGG | - | chr7_3:74820946-74820965 | None:intergenic | 55.0% | |
CGAGGAGGAGGTGAAACAAC+AGG | + | chr7_3:74820947-74820966 | Msa1123830:CDS | 55.0% | |
! | CAACGATCTGCTTCTGGAGG+AGG | - | chr7_3:74820977-74820996 | None:intergenic | 55.0% |
CTCCTCCAGAAGCAGATCGT+TGG | + | chr7_3:74820975-74820994 | Msa1123830:CDS | 55.0% | |
CCTCCAGAAGCAGATCGTTG+GGG | + | chr7_3:74820977-74820996 | Msa1123830:CDS | 55.0% | |
GTTGGGGTAACAGTAGCAGC+AGG | + | chr7_3:74820993-74821012 | Msa1123830:CDS | 55.0% | |
ACCCCCACCAGAACCAAATG+AGG | - | chr7_3:74821050-74821069 | None:intergenic | 55.0% | |
!! | TTGGTTCTGGTGGGGGTTCA+AGG | + | chr7_3:74821053-74821072 | Msa1123830:CDS | 55.0% |
TGCGATTCCGGTGCGTTTCC+CGG | + | chr7_3:74814503-74814522 | Msa1123830:intron | 60.0% | |
ACGTAGTCAGGCTCAGGCCT+TGG | + | chr7_3:74815728-74815747 | Msa1123830:CDS | 60.0% | |
GCCTCCTTATGGCGCGGTTA+CGG | + | chr7_3:74816035-74816054 | Msa1123830:intron | 60.0% | |
TCCTTATGGCGCGGTTACGG+CGG | + | chr7_3:74816038-74816057 | Msa1123830:intron | 60.0% | |
CCGTGAGTGCGATCATGAGG+AGG | - | chr7_3:74817058-74817077 | None:intergenic | 60.0% | |
GCACCGTGAGTGCGATCATG+AGG | - | chr7_3:74817061-74817080 | None:intergenic | 60.0% | |
AGTGACGGCCTTGAGAGCTG+GGG | - | chr7_3:74817272-74817291 | None:intergenic | 60.0% | |
GAAGTGACGGCCTTGAGAGC+TGG | - | chr7_3:74817274-74817293 | None:intergenic | 60.0% | |
CGCGCGCTCTGTAAGGTTCA+GGG | + | chr7_3:74817623-74817642 | Msa1123830:intron | 60.0% | |
GCGCGCTCTGTAAGGTTCAG+GGG | + | chr7_3:74817624-74817643 | Msa1123830:intron | 60.0% | |
CCTGAGGAGGGAAGGCAAAC+AGG | - | chr7_3:74818034-74818053 | None:intergenic | 60.0% | |
CCTGTTTGCCTTCCCTCCTC+AGG | + | chr7_3:74818031-74818050 | Msa1123830:intron | 60.0% | |
ACAGCCACCGTTGCTCTGCA+TGG | + | chr7_3:74819442-74819461 | Msa1123830:intron | 60.0% | |
CAGCCACCGTTGCTCTGCAT+GGG | + | chr7_3:74819443-74819462 | Msa1123830:intron | 60.0% | |
GTACCCATGCAGAGCAACGG+TGG | - | chr7_3:74819449-74819468 | None:intergenic | 60.0% | |
CCCGTACCCATGCAGAGCAA+CGG | - | chr7_3:74819452-74819471 | None:intergenic | 60.0% | |
CCGTTGCTCTGCATGGGTAC+GGG | + | chr7_3:74819449-74819468 | Msa1123830:intron | 60.0% | |
CGTTGCTCTGCATGGGTACG+GGG | + | chr7_3:74819450-74819469 | Msa1123830:intron | 60.0% | |
CGAACAACTCCGGGAGAGAC+AGG | + | chr7_3:74819636-74819655 | Msa1123830:CDS | 60.0% | |
CTAAGCAGACAGCGCCATGC+TGG | + | chr7_3:74819958-74819977 | Msa1123830:CDS | 60.0% | |
GCGTGAGGAGGAAGAAGCTC+GGG | + | chr7_3:74820348-74820367 | Msa1123830:CDS | 60.0% | |
! | GAAGAAGCTCGGGAGCGTGA+AGG | + | chr7_3:74820358-74820377 | Msa1123830:CDS | 60.0% |
! | GGCCTAAGAGCTGGTTCAGC+AGG | - | chr7_3:74820830-74820849 | None:intergenic | 60.0% |
GGACGGACAGGAGGCTCATA+AGG | - | chr7_3:74820851-74820870 | None:intergenic | 60.0% | |
GGATCAACTGGACGGACAGG+AGG | - | chr7_3:74820860-74820879 | None:intergenic | 60.0% | |
CCAGGATCAACTGGACGGAC+AGG | - | chr7_3:74820863-74820882 | None:intergenic | 60.0% | |
CCTGTCCGTCCAGTTGATCC+TGG | + | chr7_3:74820860-74820879 | Msa1123830:CDS | 60.0% | |
GCAGCAGTGCCAGGATCAAC+TGG | - | chr7_3:74820872-74820891 | None:intergenic | 60.0% | |
TACGTTCCCAAGTTCCGGCG+AGG | + | chr7_3:74820929-74820948 | Msa1123830:CDS | 60.0% | |
CCCCAACGATCTGCTTCTGG+AGG | - | chr7_3:74820980-74820999 | None:intergenic | 60.0% | |
GGGTAACAGTAGCAGCAGGC+CGG | + | chr7_3:74820997-74821016 | Msa1123830:CDS | 60.0% | |
AACAGTAGCAGCAGGCCGGA+TGG | + | chr7_3:74821001-74821020 | Msa1123830:CDS | 60.0% | |
CGATCCCACCTGTCACCATC+CGG | - | chr7_3:74821019-74821038 | None:intergenic | 60.0% | |
ACAACGGCCGGGAAACGCAC+CGG | - | chr7_3:74814513-74814532 | None:intergenic | 65.0% | |
CTCGGAATTGCGTCGCGGAG+TGG | - | chr7_3:74814575-74814594 | None:intergenic | 65.0% | |
GCCGTAACCGCGCCATAAGG+AGG | - | chr7_3:74816039-74816058 | None:intergenic | 65.0% | |
CCTTATGGCGCGGTTACGGC+GGG | + | chr7_3:74816039-74816058 | Msa1123830:intron | 65.0% | |
GTGTGTGCGCGCGCTCTGTA+AGG | + | chr7_3:74817616-74817635 | Msa1123830:intron | 65.0% | |
GCGCGCGCTCTGTAAGGTTC+AGG | + | chr7_3:74817622-74817641 | Msa1123830:intron | 65.0% | |
GTTCCCAAGTTCCGGCGAGG+AGG | + | chr7_3:74820932-74820951 | Msa1123830:CDS | 65.0% | |
CCTCCTCCTCGCCGGAACTT+GGG | - | chr7_3:74820938-74820957 | None:intergenic | 65.0% | |
ACCTCCTCCTCGCCGGAACT+TGG | - | chr7_3:74820939-74820958 | None:intergenic | 65.0% | |
CAGGCCGGATGGTGACAGGT+GGG | + | chr7_3:74821012-74821031 | Msa1123830:CDS | 65.0% | |
CCCGCCGTAACCGCGCCATA+AGG | - | chr7_3:74816042-74816061 | None:intergenic | 70.0% | |
GCAGCTGGAGCAGCAGTGCC+AGG | - | chr7_3:74820881-74820900 | None:intergenic | 70.0% | |
CTGCAGCAGCCCCAGCTCCA+GGG | + | chr7_3:74820903-74820922 | Msa1123830:CDS | 70.0% | |
CCCAAGTTCCGGCGAGGAGG+AGG | + | chr7_3:74820935-74820954 | Msa1123830:CDS | 70.0% | |
GCAGCAGGCCGGATGGTGAC+AGG | + | chr7_3:74821008-74821027 | Msa1123830:CDS | 70.0% | |
GCAGGCCGGATGGTGACAGG+TGG | + | chr7_3:74821011-74821030 | Msa1123830:CDS | 70.0% | |
GGGGCTGCTGCAGCAGCAGC+TGG | - | chr7_3:74820896-74820915 | None:intergenic | 75.0% | |
GCTGCAGCAGCCCCAGCTCC+AGG | + | chr7_3:74820902-74820921 | Msa1123830:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7_3 | gene | 74814202 | 74821468 | 74814202 | ID=Msa1123830;Name=Msa1123830 |
chr7_3 | mRNA | 74814202 | 74821468 | 74814202 | ID=Msa1123830-mRNA-1;Parent=Msa1123830;Name=Msa1123830-mRNA-1;_AED=0.08;_eAED=0.08;_QI=272|1|1|1|0.92|0.85|14|348|959 |
chr7_3 | exon | 74814202 | 74814447 | 74814202 | ID=Msa1123830-mRNA-1:exon:19962;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74815286 | 74815357 | 74815286 | ID=Msa1123830-mRNA-1:exon:19963;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74815466 | 74815947 | 74815466 | ID=Msa1123830-mRNA-1:exon:19964;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74816508 | 74816723 | 74816508 | ID=Msa1123830-mRNA-1:exon:19965;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74816809 | 74817177 | 74816809 | ID=Msa1123830-mRNA-1:exon:19966;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74817275 | 74817304 | 74817275 | ID=Msa1123830-mRNA-1:exon:19967;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74817736 | 74817963 | 74817736 | ID=Msa1123830-mRNA-1:exon:19968;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74818053 | 74818214 | 74818053 | ID=Msa1123830-mRNA-1:exon:19969;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74818613 | 74818834 | 74818613 | ID=Msa1123830-mRNA-1:exon:19970;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74818943 | 74819149 | 74818943 | ID=Msa1123830-mRNA-1:exon:19971;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74819595 | 74819801 | 74819595 | ID=Msa1123830-mRNA-1:exon:19972;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74819946 | 74820026 | 74819946 | ID=Msa1123830-mRNA-1:exon:19973;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74820178 | 74820379 | 74820178 | ID=Msa1123830-mRNA-1:exon:19974;Parent=Msa1123830-mRNA-1 |
chr7_3 | exon | 74820693 | 74821468 | 74820693 | ID=Msa1123830-mRNA-1:exon:19975;Parent=Msa1123830-mRNA-1 |
chr7_3 | five_prime_UTR | 74814202 | 74814447 | 74814202 | ID=Msa1123830-mRNA-1:five_prime_utr;Parent=Msa1123830-mRNA-1 |
chr7_3 | five_prime_UTR | 74815286 | 74815311 | 74815286 | ID=Msa1123830-mRNA-1:five_prime_utr;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74815312 | 74815357 | 74815312 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74815466 | 74815947 | 74815466 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74816508 | 74816723 | 74816508 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74816809 | 74817177 | 74816809 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74817275 | 74817304 | 74817275 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74817736 | 74817963 | 74817736 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74818053 | 74818214 | 74818053 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74818613 | 74818834 | 74818613 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74818943 | 74819149 | 74818943 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74819595 | 74819801 | 74819595 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74819946 | 74820026 | 74819946 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74820178 | 74820379 | 74820178 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | CDS | 74820693 | 74821120 | 74820693 | ID=Msa1123830-mRNA-1:cds;Parent=Msa1123830-mRNA-1 |
chr7_3 | three_prime_UTR | 74821121 | 74821468 | 74821121 | ID=Msa1123830-mRNA-1:three_prime_utr;Parent=Msa1123830-mRNA-1 |
Gene Sequence |
Protein sequence |