AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0595170

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0595170 MtrunA17_Chr4g0014351 89.054 877 48 7 41 877 1 869 0.0 1401
Msa0595170 MtrunA17_Chr5g0396231 58.824 119 48 1 758 876 382 499 1.73e-39 153
Msa0595170 MtrunA17_Chr5g0396231 45.390 141 71 3 41 177 1 139 3.50e-30 125
Msa0595170 MtrunA17_Chr8g0339171 41.573 89 52 0 789 877 50 138 2.22e-14 71.6
Msa0595170 MtrunA17_Chr1g0179681 35.484 124 66 5 762 876 125 243 3.76e-14 73.6
Msa0595170 MtrunA17_Chr8g0352971 41.176 85 48 1 792 874 20 104 8.91e-14 74.3
Msa0595170 MtrunA17_Chr7g0234801 36.047 86 55 0 789 874 52 137 1.51e-12 71.2
Msa0595170 MtrunA17_Chr8g0377771 37.209 86 54 0 789 874 56 141 7.52e-12 68.9
Msa0595170 MtrunA17_Chr8g0339141 36.782 87 55 0 788 874 57 143 1.29e-11 68.2
Msa0595170 MtrunA17_Chr4g0052911 38.583 127 61 6 761 874 115 237 1.74e-11 65.1
Msa0595170 MtrunA17_Chr5g0435521 35.714 84 53 1 792 874 35 118 3.27e-11 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0595170 AT3G12340.1 52.356 191 68 5 41 209 1 190 9.62e-45 169
Msa0595170 AT3G12340.1 55.085 118 53 0 760 877 382 499 2.69e-36 144
Msa0595170 AT4G25340.1 56.667 120 52 0 758 877 358 477 6.82e-41 157
Msa0595170 AT4G25340.1 38.849 139 80 3 41 174 1 139 1.56e-23 105
Msa0595170 AT3G12340.3 55.085 118 53 0 760 877 261 378 1.19e-37 145
Msa0595170 AT3G12340.2 55.085 118 53 0 760 877 261 378 1.19e-37 145
Msa0595170 AT5G05420.1 50.000 108 53 1 769 876 36 142 8.72e-30 115
Msa0595170 AT4G25340.2 38.849 139 80 3 41 174 1 139 7.66e-24 106
Msa0595170 AT4G25340.2 57.895 76 32 0 758 833 358 433 1.57e-22 102
Msa0595170 AT5G48580.1 41.573 89 52 0 789 877 52 140 9.45e-15 73.2
Msa0595170 AT3G10060.1 35.484 124 66 5 762 876 98 216 2.78e-14 73.6
Msa0595170 AT3G25220.1 42.697 89 51 0 789 877 52 140 3.12e-14 71.6
Msa0595170 AT5G48570.1 38.372 86 53 0 789 874 65 150 3.18e-13 73.9
Msa0595170 AT3G25230.1 37.931 87 54 0 789 875 57 143 3.94e-12 70.5
Msa0595170 AT3G25230.2 37.931 87 54 0 789 875 57 143 5.31e-12 70.1

Find 196 sgRNAs with CRISPR-Local

Find 632 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGTCCTTGCAATTGAATT+TGG 0.202666 4_2:+24029266 Msa0595170:CDS
AAACTCTACTCTCCGGGTTT+AGG 0.224182 4_2:+24027925 Msa0595170:CDS
TCATAAACCAACCATGAATT+TGG 0.244200 4_2:-24037300 None:intergenic
GTTATTGAGGGTTGGGATAT+TGG 0.252092 4_2:+24036978 Msa0595170:CDS
CCATTTCTGTTGTCACCTTC+AGG 0.260314 4_2:-24034150 None:intergenic
AACTCTACTCTCCGGGTTTA+GGG 0.271814 4_2:+24027926 Msa0595170:CDS
CTTCCACTGTTCCGGATGTT+GGG 0.283057 4_2:+24030858 Msa0595170:CDS
CTTCCACTGTTCCGGATGTT+GGG 0.283057 4_2:+24031727 Msa0595170:CDS
CTTGAGACAGGGAAAGAAAA+TGG 0.283603 4_2:+24036629 Msa0595170:CDS
TGGTCATGTTTGAGTGAATA+TGG 0.290346 4_2:+24037372 Msa0595170:three_prime_UTR
GGCAGTTCCTTCCACTGTTC+CGG 0.304338 4_2:+24031719 Msa0595170:CDS
GACAGTTCCTTCCACTGTTC+CGG 0.305801 4_2:+24030850 Msa0595170:CDS
CCCGGAGAGTAGAGTTTGTT+TGG 0.321928 4_2:-24027919 None:intergenic
AATGTTATTCTTTCCGTCCT+TGG 0.324140 4_2:+24029306 Msa0595170:CDS
GGTCGATCCTTGCACTGTTC+CGG 0.327548 4_2:+24031263 Msa0595170:CDS
GGTGAAAATGGAAATTAAAA+AGG 0.329092 4_2:+24027869 None:intergenic
AGTAATCAGGACACAGTTAA+TGG 0.330450 4_2:+24033425 Msa0595170:CDS
AATTGCTACAGTAGGGAAAA+AGG 0.333662 4_2:+24036655 Msa0595170:CDS
TAAATCCTTTGTAAGGGTAT+TGG 0.334919 4_2:+24030537 Msa0595170:CDS
CTCTGAATTTCAGGCCACTT+TGG 0.335397 4_2:+24029152 Msa0595170:intron
TTTCTTAACTTTCTTATCTT+CGG 0.342081 4_2:-24036444 None:intergenic
GAACACAGACGAGGATCTTC+TGG 0.344791 4_2:+24031860 Msa0595170:CDS
TCTGAATTTCAGGCCACTTT+GGG 0.345462 4_2:+24029153 Msa0595170:intron
TAGTGCTACTGAAACAAAAT+TGG 0.347050 4_2:+24031066 Msa0595170:CDS
AGATTTCTCTGTTTCTGTAT+TGG 0.347847 4_2:-24030130 None:intergenic
CCTTCCACTGTTCCGGATGT+TGG 0.349134 4_2:+24030857 Msa0595170:CDS
CCTTCCACTGTTCCGGATGT+TGG 0.349134 4_2:+24031726 Msa0595170:CDS
CATTTGACAATGTTCTAACT+TGG 0.359569 4_2:-24036589 None:intergenic
ATGAACACTCACTTATCATT+AGG 0.360171 4_2:-24031909 None:intergenic
AGGAGAAGTTATTGAGGGTT+GGG 0.373313 4_2:+24036971 Msa0595170:CDS
TGAAATGTGGAGGCGACCTT+TGG 0.378340 4_2:-24028138 None:intergenic
AGAAGAATAAATCCTTTGTA+AGG 0.383149 4_2:+24030530 Msa0595170:CDS
TAAAGAGAGCACAGATAAAC+AGG 0.395132 4_2:-24029231 None:intergenic
GAAGAAGAAAGGTAAAAGTC+AGG 0.401905 4_2:+24036469 Msa0595170:CDS
AAAACATACCACCAAATTCA+TGG 0.412855 4_2:+24037289 Msa0595170:CDS
TTCTTTCCGTCCTTGGCCCT+CGG 0.414122 4_2:+24029313 Msa0595170:CDS
CTTTGTAAGGGTATTGGATC+AGG 0.415878 4_2:+24030543 Msa0595170:CDS
GGACTCTGCTGTCTCTTTGT+CGG 0.416295 4_2:-24034199 None:intergenic
CCTTGCACTGTTCCGGATGT+TGG 0.419726 4_2:+24031270 Msa0595170:CDS
AAACTCTGGCGTGCCTGTAT+CGG 0.424241 4_2:+24036505 Msa0595170:CDS
TTTCCTGATCCAAGAGATCC+TGG 0.427168 4_2:-24031413 None:intergenic
GTTATTCAAGAGCTTGAGAC+AGG 0.428795 4_2:+24036617 Msa0595170:CDS
TATCTGTGCTCTCTTTATCC+AGG 0.431922 4_2:+24029237 Msa0595170:CDS
TTCTTGCAAAGAGAAGAAAT+TGG 0.432751 4_2:-24030511 None:intergenic
AAGGAGAAGTTATTGAGGGT+TGG 0.439237 4_2:+24036970 Msa0595170:CDS
TGTGTTCATTTCCCTGAGGC+AGG 0.441265 4_2:-24033403 None:intergenic
CAATGTTGTTAACCTGCCTC+AGG 0.441931 4_2:+24033391 Msa0595170:CDS
GATGATGATAGCGGCCTTGA+AGG 0.442074 4_2:+24030424 Msa0595170:CDS
TATCTTGCCCGTGGCCGCTA+TGG 0.443510 4_2:+24029357 Msa0595170:CDS
CTGGCAAGTTGAAGGAAAAC+GGG 0.443905 4_2:+24036808 Msa0595170:CDS
TTTCCTGATCAAAGTGATCC+TGG 0.444859 4_2:-24030979 None:intergenic
GAACATGGCCCAGGATCTCT+TGG 0.449898 4_2:+24031404 Msa0595170:CDS
TGTTATCATACAATTGAATC+CGG 0.451568 4_2:-24037439 None:intergenic
TGGCCGCTATGGCAATACTA+TGG 0.452319 4_2:+24029368 Msa0595170:CDS
GGGAAATGAACACAGTAATC+AGG 0.452685 4_2:+24033412 Msa0595170:CDS
GGTTGGGATATTGGTCTTGA+AGG 0.456064 4_2:+24036987 Msa0595170:CDS
CCTGAAGGTGACAACAGAAA+TGG 0.456412 4_2:+24034150 Msa0595170:CDS
AAAATCACATACGTCATTGA+TGG 0.458266 4_2:-24037147 None:intergenic
ACTGGCAAGTTGAAGGAAAA+CGG 0.458754 4_2:+24036807 Msa0595170:CDS
ATCGCCATTACTAGAACTCT+TGG 0.460617 4_2:-24031340 None:intergenic
GGATCTCTTGGATCAGGAAA+TGG 0.461360 4_2:+24031416 Msa0595170:CDS
AAGGGTATTGGATCAGGAAA+TGG 0.462620 4_2:+24030549 Msa0595170:CDS
TTGTGCAGCATTATCTAGTT+CGG 0.464224 4_2:-24031367 None:intergenic
TCTTCGGATTGATTTCCATC+AGG 0.465182 4_2:-24036428 None:intergenic
TCACTGAGAGTCAGATTCAT+AGG 0.468116 4_2:+24030671 Msa0595170:CDS
CAGTGTGCATGTACAATCTC+AGG 0.468383 4_2:+24030465 Msa0595170:CDS
GAGTCCGGAGGCAATACAGC+TGG 0.470377 4_2:+24037405 Msa0595170:intron
GGCCCAGGATCTCTTGGATC+AGG 0.470381 4_2:+24031410 Msa0595170:CDS
CAAGTTAGAACATTGTCAAA+TGG 0.473879 4_2:+24036590 Msa0595170:CDS
CAACTCTTCCTCTGAAACAA+TGG 0.475717 4_2:+24027977 Msa0595170:CDS
ATCTGAAAGAAACAAAACTT+TGG 0.476877 4_2:-24037546 None:intergenic
GTAATCAGGACACAGTTAAT+GGG 0.477374 4_2:+24033426 Msa0595170:CDS
GACAAAGAAGCAATTGATGC+TGG 0.478437 4_2:+24030583 Msa0595170:CDS
TTTCAGTAGCACTATTCTCA+TGG 0.478874 4_2:-24031057 None:intergenic
TGCAAGGACTCAGTTTGTCC+TGG 0.479083 4_2:-24029255 None:intergenic
ATGTTCATTACTAGAGCTCT+TGG 0.479995 4_2:-24031796 None:intergenic
TTTCAATAATACTGTTCTCA+TGG 0.480905 4_2:-24030624 None:intergenic
ATCAAATTCAACATTATATG+TGG 0.484953 4_2:-24037717 None:intergenic
ACTTATCATTAGGTTGCTGC+TGG 0.489995 4_2:-24031899 None:intergenic
GTACTTTGCTCAACCGATAC+AGG 0.491823 4_2:-24036518 None:intergenic
CAGTGGAAGGAACTGCCAAC+TGG 0.491931 4_2:-24031713 None:intergenic
GACAATGTTCTAACTTGGGA+AGG 0.493720 4_2:-24036584 None:intergenic
GTTGGTTTATGACTTTGAAC+TGG 0.494478 4_2:+24037311 Msa0595170:CDS
CAATTACACTGGCAAGTTGA+AGG 0.496463 4_2:+24036800 Msa0595170:CDS
AGCTGAACCTTCTGATCACT+TGG 0.500805 4_2:+24031242 Msa0595170:CDS
ACAGCTGGGCGATCAAAATC+CGG 0.504206 4_2:+24037420 Msa0595170:three_prime_UTR
CACTCTTATGATTCTTCCAA+AGG 0.505650 4_2:+24028122 Msa0595170:CDS
AATGGGAAAATTGCTACAGT+AGG 0.508437 4_2:+24036647 Msa0595170:CDS
TTCACAGGTTGGTCAAGGAC+AGG 0.509597 4_2:+24033295 Msa0595170:CDS
CATACCACCAAATTCATGGT+TGG 0.511268 4_2:+24037293 Msa0595170:CDS
TAAAATACTACCTTCTTCAC+AGG 0.511997 4_2:+24033280 Msa0595170:CDS
GAAGTACCAGTTGGTAGAGT+CGG 0.515717 4_2:+24030402 Msa0595170:CDS
TTCCACTGTTCCGGATGTTG+GGG 0.516382 4_2:+24030859 Msa0595170:CDS
TTCCACTGTTCCGGATGTTG+GGG 0.516382 4_2:+24031728 Msa0595170:CDS
AGGTAAAGGAGAAGTTATTG+AGG 0.516723 4_2:+24036965 Msa0595170:intron
GGTAAAGGAGAAGTTATTGA+GGG 0.518782 4_2:+24036966 Msa0595170:intron
GCCAAACAAACTCTACTCTC+CGG 0.519414 4_2:+24027918 Msa0595170:CDS
TTTCAGGCCACTTTGGGACA+TGG 0.520724 4_2:+24029159 Msa0595170:intron
CATCATCCGACTCTACCAAC+TGG 0.521088 4_2:-24030408 None:intergenic
GCTCCTTTCAAATTTCGCCT+TGG 0.521588 4_2:+24036858 Msa0595170:CDS
GTCCCAGGATCACTTTGATC+AGG 0.522854 4_2:+24030976 Msa0595170:CDS
GAATCATAAGAGTGAGTGAA+AGG 0.523117 4_2:-24028113 None:intergenic
GCAATTGAATTTGGAGCTTG+AGG 0.523659 4_2:+24029275 Msa0595170:CDS
TTGAGACAGGGAAAGAAAAT+GGG 0.525124 4_2:+24036630 Msa0595170:CDS
TAGTATTGCCATAGCGGCCA+CGG 0.525730 4_2:-24029365 None:intergenic
TGATTCTCAGGCATGCGAGT+TGG 0.529832 4_2:+24037099 Msa0595170:intron
CCTTGACCAACCTGTGAAGA+AGG 0.529915 4_2:-24033290 None:intergenic
TCCATCCAACTGATTGTGGC+TGG 0.529976 4_2:+24037352 Msa0595170:three_prime_UTR
CTTTCACCAACGACTCGACA+TGG 0.530014 4_2:-24037588 None:intergenic
ACTGAGATGATGGAAGAGGA+TGG 0.530349 4_2:+24036539 Msa0595170:CDS
AATTTGGAGCTTGAGGAAGA+TGG 0.534366 4_2:+24029282 Msa0595170:CDS
TGAGCAAAGTACTGAGATGA+TGG 0.540063 4_2:+24036529 Msa0595170:CDS
ATTTGACAATGTTCTAACTT+GGG 0.541426 4_2:-24036588 None:intergenic
CCAAACAAACTCTACTCTCC+GGG 0.544183 4_2:+24027919 Msa0595170:CDS
TCGCAGATATTCAAACTCAT+AGG 0.545219 4_2:+24031538 Msa0595170:CDS
AGCTGAACCTTCAGACCAGT+TGG 0.547478 4_2:+24031698 Msa0595170:CDS
GACAGAGAAACAGTTGATGC+TGG 0.549982 4_2:+24031016 Msa0595170:CDS
ACAATGGAAAGGGAATCATA+TGG 0.551522 4_2:+24030096 Msa0595170:intron
TGAGAATCTGTCTCAGAGGA+AGG 0.554915 4_2:-24034078 None:intergenic
AGCACTCTGCAATGTAATGT+GGG 0.555619 4_2:+24029198 Msa0595170:CDS
AGGTCGCCTCCACATTTCAA+TGG 0.556393 4_2:+24028142 Msa0595170:CDS
TTACTCCATCCAACTGATTG+TGG 0.558119 4_2:+24037348 Msa0595170:three_prime_UTR
AAGTACTGAGATGATGGAAG+AGG 0.558158 4_2:+24036535 Msa0595170:CDS
TTACCAAGGCGAAATTTGAA+AGG 0.559040 4_2:-24036861 None:intergenic
GATGAATACTCCGAGGGCCA+AGG 0.559789 4_2:-24029323 None:intergenic
TGCATGTTTCAGGTCTAAGA+AGG 0.559920 4_2:+24037254 Msa0595170:intron
GCAGGTGTTGAAATCAAACC+TGG 0.561306 4_2:+24028086 Msa0595170:intron
ATACTACCTTCTTCACAGGT+TGG 0.562544 4_2:+24033284 Msa0595170:CDS
AGGCAGGAAAGCTGAAACCA+CGG 0.563166 4_2:+24033256 Msa0595170:intron
CTGATCCAATACCCTTACAA+AGG 0.563428 4_2:-24030542 None:intergenic
ACCAGCCACAATCAGTTGGA+TGG 0.563509 4_2:-24037353 None:intergenic
GGAACTGCCAACTGGTCTGA+AGG 0.564194 4_2:-24031705 None:intergenic
CCTTCTTCACAGGTTGGTCA+AGG 0.564207 4_2:+24033290 Msa0595170:CDS
GTGCGAAAGGCAGCAGAAGA+CGG 0.564863 4_2:+24030371 Msa0595170:CDS
TTGCAGATAGTCAGACTCAC+AGG 0.565785 4_2:+24031104 Msa0595170:CDS
TTCCTGATCAAAGTGATCCT+GGG 0.566097 4_2:-24030978 None:intergenic
TGCAGCATTATCTAGTTCAG+TGG 0.568551 4_2:-24030930 None:intergenic
AAGGCAGCAGAAGACGGCTG+AGG 0.570683 4_2:+24030377 Msa0595170:CDS
AAGCACTCTGCAATGTAATG+TGG 0.570727 4_2:+24029197 Msa0595170:CDS
ATGGGAAAATTGCTACAGTA+GGG 0.572946 4_2:+24036648 Msa0595170:CDS
AAGCTCCAAATTCAATTGCA+AGG 0.573154 4_2:-24029271 None:intergenic
AAGAAGAAAGGTAAAAGTCA+GGG 0.578186 4_2:+24036470 Msa0595170:CDS
TGCAGCATTATCTAGTTCGG+TGG 0.579079 4_2:-24031364 None:intergenic
CAACATTATATGTGGAGACA+TGG 0.580224 4_2:-24037709 None:intergenic
CGCAGCATTATCTAGATCGG+TGG 0.581023 4_2:-24031820 None:intergenic
GGTCATGTTTGAGTGAATAT+GGG 0.581265 4_2:+24037373 Msa0595170:three_prime_UTR
GGAACTGTCAACTGATCTGA+AGG 0.581399 4_2:-24030836 None:intergenic
CGAAAACCATGTCGAGTCGT+TGG 0.581601 4_2:+24037582 Msa0595170:three_prime_UTR
GGCAGTGAAGTCGTAAACTC+TGG 0.583135 4_2:+24036491 Msa0595170:CDS
CATGACCAGCCACAATCAGT+TGG 0.583859 4_2:-24037357 None:intergenic
GGATCGACCAAGTGATCAGA+AGG 0.590673 4_2:-24031249 None:intergenic
GACAAAGAAGCAGTTGATGA+TGG 0.591027 4_2:+24031450 Msa0595170:CDS
CCAACATCCGGAACAGTGCA+AGG 0.592707 4_2:-24031270 None:intergenic
GAAGAATAAATCCTTTGTAA+GGG 0.593834 4_2:+24030531 Msa0595170:CDS
AGTCCGGAGGCAATACAGCT+GGG 0.594457 4_2:+24037406 Msa0595170:intron
TAAACCAACCATGAATTTGG+TGG 0.597643 4_2:-24037297 None:intergenic
CCAACATCCGGAACAGTGGA+AGG 0.599169 4_2:-24030857 None:intergenic
CCAACATCCGGAACAGTGGA+AGG 0.599169 4_2:-24031726 None:intergenic
AGCATTATCTAGTTCAGTGG+AGG 0.600926 4_2:-24030927 None:intergenic
GAAACCAAGAGTTCTAGTAA+TGG 0.601240 4_2:+24031336 Msa0595170:CDS
AGTATTGCCATAGCGGCCAC+GGG 0.602067 4_2:-24029364 None:intergenic
TTGCGCAGCATTATCTAGAT+CGG 0.602410 4_2:-24031823 None:intergenic
ATCACATACGTCATTGATGG+TGG 0.602573 4_2:-24037144 None:intergenic
AATGTTGTTAACCTGCCTCA+GGG 0.602636 4_2:+24033392 Msa0595170:CDS
GCAGAGGAAGCATCTTCTGA+TGG 0.602658 4_2:+24030337 Msa0595170:intron
TGCGGTTATTATCTTGCCCG+TGG 0.602837 4_2:+24029348 Msa0595170:CDS
TGCAGTGCCATGTCCCAAAG+TGG 0.602865 4_2:-24029166 None:intergenic
GGTGCTCAAGACAATCCTGA+TGG 0.604417 4_2:+24036413 Msa0595170:CDS
GTGGTGATTGAATCAAATGC+TGG 0.607008 4_2:+24036831 Msa0595170:CDS
AACAAAGCTTCATATCCTGA+AGG 0.610921 4_2:+24034135 Msa0595170:CDS
ATCCCCAACATCCGGAACAG+TGG 0.617458 4_2:-24031730 None:intergenic
CAGATCAGCATCAATTACAC+TGG 0.623336 4_2:+24036789 Msa0595170:intron
TGTTTCAGGTCTAAGAAGGA+TGG 0.623488 4_2:+24037258 Msa0595170:intron
ACAGACGAGGATCTTCTGGC+AGG 0.625586 4_2:+24031864 Msa0595170:CDS
TTCCTGATCCAAGAGATCCT+GGG 0.625814 4_2:-24031412 None:intergenic
GAAAGATTACCATTGAAATG+TGG 0.627543 4_2:-24028151 None:intergenic
CGCAGAGATGAATACTCCGA+GGG 0.629223 4_2:-24029329 None:intergenic
CATCCATAGTATTGCCATAG+CGG 0.629804 4_2:-24029371 None:intergenic
ATTCTCAAAAGAAAACAAAG+AGG 0.632744 4_2:+24034094 Msa0595170:CDS
AGATTACCATTGAAATGTGG+AGG 0.633007 4_2:-24028148 None:intergenic
GGTGACAACAGAAATGGAGA+AGG 0.633425 4_2:+24034156 Msa0595170:CDS
AATACTCCGAGGGCCAAGGA+CGG 0.634343 4_2:-24029319 None:intergenic
ATCCCCAACATCCGGAACAG+TGG 0.646276 4_2:-24030861 None:intergenic
TGGTGCAGCAGTGTGGACAA+TGG 0.653645 4_2:+24036392 Msa0595170:intron
GAGGAAGCATCTTCTGATGG+CGG 0.656231 4_2:+24030340 Msa0595170:intron
CGAGTCGTTGGTGAAAGTCA+TGG 0.657325 4_2:+24037594 Msa0595170:three_prime_UTR
TTATTCAAGAGCTTGAGACA+GGG 0.658642 4_2:+24036618 Msa0595170:CDS
GCTGAGGAAGAAGTACCAGT+TGG 0.680204 4_2:+24030393 Msa0595170:CDS
TTACTGTGTTCATTTCCCTG+AGG 0.689976 4_2:-24033407 None:intergenic
TTATTTCTGGTGCAGCAGTG+TGG 0.690159 4_2:+24036385 Msa0595170:intron
GTAGAGTCGGATGATGATAG+CGG 0.696596 4_2:+24030415 Msa0595170:CDS
GTCGTTGGTGAAAGTCATGG+TGG 0.698948 4_2:+24037597 Msa0595170:three_prime_UTR
CCGCAGAGATGAATACTCCG+AGG 0.717928 4_2:-24029330 None:intergenic
CAAGTTGAAGGAAAACGGGG+TGG 0.725155 4_2:+24036812 Msa0595170:CDS
CCTCGGAGTATTCATCTCTG+CGG 0.742424 4_2:+24029330 Msa0595170:CDS
TGGCAAGTTGAAGGAAAACG+GGG 0.750008 4_2:+24036809 Msa0595170:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTAAATTTGAAACTATTATA+TGG + chr4_2:24028436-24028455 Msa0595170:intron 10.0%
!! ATAATAACCAAAAAAAAAAA+AGG - chr4_2:24029441-24029460 None:intergenic 10.0%
!!! TTTTTTTTTTTTGGTTATTA+TGG + chr4_2:24029440-24029459 Msa0595170:intron 10.0%
!!! AAAAATTATTTTCATTTTTC+TGG + chr4_2:24029888-24029907 Msa0595170:intron 10.0%
!! TTAAAAAAAATCAAAAGTAA+AGG - chr4_2:24032937-24032956 None:intergenic 10.0%
!! ATAAATTATTTACAGAATAT+AGG + chr4_2:24033637-24033656 Msa0595170:intron 10.0%
!! AACTAAATAAATTTATTGTA+AGG - chr4_2:24033873-24033892 None:intergenic 10.0%
!! CAAGTTAATTTATTAAAAAT+AGG + chr4_2:24034481-24034500 Msa0595170:intron 10.0%
!! TAATTTATTAAAAATAGGAT+AGG + chr4_2:24034486-24034505 Msa0595170:intron 10.0%
!! AAAAAAAAAAAAAAAGAGTA+AGG - chr4_2:24037200-24037219 None:intergenic 10.0%
!!! ACTTTTAAAAAATAATGTTA+TGG + chr4_2:24037672-24037691 Msa0595170:three_prime_UTR 10.0%
!!! TTAGAAAAAATGATAGATTT+TGG + chr4_2:24028472-24028491 Msa0595170:intron 15.0%
!!! AATAATAAAAGTGGTTTTTT+CGG + chr4_2:24028592-24028611 Msa0595170:intron 15.0%
!! TAAAGTTTGTCAAAAATATA+AGG - chr4_2:24029405-24029424 None:intergenic 15.0%
!!! AAAATTTACTATCTCTAAAA+GGG - chr4_2:24030760-24030779 None:intergenic 15.0%
!! AAAAATTTACTATCTCTAAA+AGG - chr4_2:24030761-24030780 None:intergenic 15.0%
!! CAAACATAATTTATAAACAA+AGG - chr4_2:24031208-24031227 None:intergenic 15.0%
!! GATAAAATGTTAGATTAATT+TGG + chr4_2:24031994-24032013 Msa0595170:intron 15.0%
!!! TTAGATTAATTTGGAAAATT+CGG + chr4_2:24032003-24032022 Msa0595170:intron 15.0%
!! TTTGTATAAATACAATAGTT+TGG - chr4_2:24032029-24032048 None:intergenic 15.0%
!!! AACTTTGAAATAATGAATTT+AGG + chr4_2:24032057-24032076 Msa0595170:intron 15.0%
!!! ACTTTGAAATAATGAATTTA+GGG + chr4_2:24032058-24032077 Msa0595170:intron 15.0%
!!! TTATATTTTAAAAATGCTTG+TGG + chr4_2:24032556-24032575 Msa0595170:intron 15.0%
!! ACTTATGATATTATTTGTAA+AGG - chr4_2:24032862-24032881 None:intergenic 15.0%
!! TTCTGTAAATAATTTATATG+AGG - chr4_2:24033634-24033653 None:intergenic 15.0%
!! AAGAAATTTATAAAATCCAA+AGG - chr4_2:24035018-24035037 None:intergenic 15.0%
!!! TTGGATTTTATAAATTTCTT+TGG + chr4_2:24035018-24035037 Msa0595170:intron 15.0%
!!! TTATAAATTTCTTTGGTAAT+AGG + chr4_2:24035025-24035044 Msa0595170:intron 15.0%
!!! TTTTATAAACTTTTAAACGA+AGG - chr4_2:24035108-24035127 None:intergenic 15.0%
!! TACAAATAACTAGTTATTTA+AGG + chr4_2:24035617-24035636 Msa0595170:intron 15.0%
!!! TTTTTTTTTTGAGCAAATAT+TGG - chr4_2:24035651-24035670 None:intergenic 15.0%
!! TGCTCAAAAAAAAAAAAAAA+AGG + chr4_2:24035656-24035675 Msa0595170:intron 15.0%
!!! TGATTTAAAATATTTTAGTG+AGG + chr4_2:24036691-24036710 Msa0595170:intron 15.0%
!!! TTAACATTTAGGTTTTTGAT+CGG - chr4_2:24028034-24028053 None:intergenic 20.0%
!! CAGAAAATGAATTAACATTT+AGG - chr4_2:24028045-24028064 None:intergenic 20.0%
!! TAAATGCATTTCAAAATTGA+CGG - chr4_2:24028304-24028323 None:intergenic 20.0%
!!! TCAATTTTGAAATGCATTTA+GGG + chr4_2:24028304-24028323 Msa0595170:intron 20.0%
!!! ACGCTTTAAAATAATAAAAG+TGG + chr4_2:24028583-24028602 Msa0595170:intron 20.0%
!! TTAGAAAAATCACAAACAAA+CGG + chr4_2:24028615-24028634 Msa0595170:intron 20.0%
!! CTTATAAAGAAGTTAACTTA+AGG + chr4_2:24029799-24029818 Msa0595170:intron 20.0%
!! CAAACATAATTTAAGAACAA+AGG - chr4_2:24030795-24030814 None:intergenic 20.0%
!! AAAGTCAAAAAAGAAAAAGA+AGG + chr4_2:24030889-24030908 Msa0595170:CDS 20.0%
!! AAGTCAAAAAAGAAAAAGAA+GGG + chr4_2:24030890-24030909 Msa0595170:CDS 20.0%
!! AAAGTCAAAAAAGAAAAAGA+AGG + chr4_2:24030889-24030908 Msa0595170:CDS 20.0%
!! AAGTCAAAAAAGAAAAAGAA+GGG + chr4_2:24030890-24030909 Msa0595170:CDS 20.0%
!!! AATATTCAGTATCTCTAAAA+GGG - chr4_2:24031629-24031648 None:intergenic 20.0%
!! AAATATTCAGTATCTCTAAA+AGG - chr4_2:24031630-24031649 None:intergenic 20.0%
!! CAAACATAATTTATGAACAA+AGG - chr4_2:24031664-24031683 None:intergenic 20.0%
!! AAAGTCAAAAAAGAAAAAGA+AGG + chr4_2:24030889-24030908 Msa0595170:CDS 20.0%
!! AAGTCAAAAAAGAAAAAGAA+GGG + chr4_2:24030890-24030909 Msa0595170:CDS 20.0%
!! TTCATTATTTCAAAGTTTCA+AGG - chr4_2:24032054-24032073 None:intergenic 20.0%
!!! GAATTAGTTTGAAAAAAAAG+AGG - chr4_2:24032175-24032194 None:intergenic 20.0%
!! AAATGTTCAAAACTTAATTC+CGG + chr4_2:24032236-24032255 Msa0595170:intron 20.0%
!!! CTATTGATTTATCTATGATA+TGG - chr4_2:24032604-24032623 None:intergenic 20.0%
!! CATATCATAGATAAATCAAT+AGG + chr4_2:24032602-24032621 Msa0595170:intron 20.0%
!!! TTTTTCACCTAATTTTTAAG+TGG + chr4_2:24032799-24032818 Msa0595170:intron 20.0%
!! TATTATTTGTAAAGGAGTAA+AGG - chr4_2:24032854-24032873 None:intergenic 20.0%
!! ATGAAAAACCAAAGAAAAAA+AGG + chr4_2:24033318-24033337 Msa0595170:CDS 20.0%
!! CTACTTCTATTTATATAATC+AGG + chr4_2:24033463-24033482 Msa0595170:intron 20.0%
!! GTAAATAATTTATATGAGGA+AGG - chr4_2:24033630-24033649 None:intergenic 20.0%
!!! TGTTTTAAATAATTACCTTC+TGG + chr4_2:24033687-24033706 Msa0595170:intron 20.0%
!!! TGTCTTAATCTTTTCTTAAT+TGG + chr4_2:24034402-24034421 Msa0595170:intron 20.0%
!! AAAAATAGGATAGGAATAAA+AGG + chr4_2:24034495-24034514 Msa0595170:intron 20.0%
!! TTTAATAGAATCAATGTTTG+AGG + chr4_2:24035374-24035393 Msa0595170:intron 20.0%
!! ACCAAAATATAATTAAAGAG+AGG + chr4_2:24035499-24035518 Msa0595170:intron 20.0%
!! ATAATCTTGGATATTATTTC+TGG + chr4_2:24036372-24036391 Msa0595170:intron 20.0%
!! TTTCTTAACTTTCTTATCTT+CGG - chr4_2:24036447-24036466 None:intergenic 20.0%
!! TAATAAAATGTTCTGGTAAA+TGG - chr4_2:24036894-24036913 None:intergenic 20.0%
!!! ATTTTTCTTTTAGCACAAAA+AGG - chr4_2:24037651-24037670 None:intergenic 20.0%
! CAAAAGCTTCAATAAAATCA+CGG - chr4_2:24028226-24028245 None:intergenic 25.0%
!!! GTCAATTTTGAAATGCATTT+AGG + chr4_2:24028303-24028322 Msa0595170:intron 25.0%
!!! AGATTTTTGAAAAAAGCTGA+AGG + chr4_2:24028392-24028411 Msa0595170:intron 25.0%
! TAGAAAAATCACAAACAAAC+GGG + chr4_2:24028616-24028635 Msa0595170:intron 25.0%
!!! ATGTAAAGTGGTTTTATGTT+TGG + chr4_2:24028699-24028718 Msa0595170:intron 25.0%
!!! TGTAAAGTGGTTTTATGTTT+GGG + chr4_2:24028700-24028719 Msa0595170:intron 25.0%
!! TTTTGACAAAAACTACACTT+TGG - chr4_2:24028933-24028952 None:intergenic 25.0%
!! ATGTTTGGAATACGAAATAA+TGG + chr4_2:24029011-24029030 Msa0595170:intron 25.0%
! AATTGTAAACTCTGAATTTC+AGG + chr4_2:24029143-24029162 Msa0595170:intron 25.0%
! TTTACACATTGAAATCATTC+AGG + chr4_2:24029491-24029510 Msa0595170:intron 25.0%
! ATTGAAATCATTCAGGAAAA+TGG + chr4_2:24029498-24029517 Msa0595170:intron 25.0%
!!! TTTTAACTTAGACGAGTATT+TGG + chr4_2:24029587-24029606 Msa0595170:intron 25.0%
!!! AAGTATTTGATTTTGAGCTT+AGG + chr4_2:24029756-24029775 Msa0595170:intron 25.0%
! GTTTCAGAAAATATAGAGAT+TGG + chr4_2:24029823-24029842 Msa0595170:intron 25.0%
!!! GATAGTTTTATTAACGATGA+CGG + chr4_2:24030180-24030199 Msa0595170:CDS 25.0%
! AGAAGAATAAATCCTTTGTA+AGG + chr4_2:24030530-24030549 Msa0595170:CDS 25.0%
! GAAGAATAAATCCTTTGTAA+GGG + chr4_2:24030531-24030550 Msa0595170:CDS 25.0%
! TTTCAATAATACTGTTCTCA+TGG - chr4_2:24030627-24030646 None:intergenic 25.0%
! AAAAAAGAAAAAGAAGGGAA+AGG + chr4_2:24030895-24030914 Msa0595170:CDS 25.0%
! AAAATTTACAATCTCCAAGA+GGG - chr4_2:24031175-24031194 None:intergenic 25.0%
! AAAAATTTACAATCTCCAAG+AGG - chr4_2:24031176-24031195 None:intergenic 25.0%
!! TTTTTAATATCTCCAACATC+CGG - chr4_2:24031285-24031304 None:intergenic 25.0%
! AAAAAAGAAAAAGAAGGGAA+AGG + chr4_2:24030895-24030914 Msa0595170:CDS 25.0%
! AAAAAAGAAAAAGAAGGGAA+AGG + chr4_2:24030895-24030914 Msa0595170:CDS 25.0%
!! TTTGAAAAAAAAGAGGTATG+AGG - chr4_2:24032168-24032187 None:intergenic 25.0%
!! ACATTGTTGGAATGAATTTT+CGG - chr4_2:24032310-24032329 None:intergenic 25.0%
! TGACATAGATTCATATAAGT+CGG - chr4_2:24032406-24032425 None:intergenic 25.0%
! AAATTAGGTGAAAAATTCAG+TGG - chr4_2:24032794-24032813 None:intergenic 25.0%
! ATGGTAACCACTTAAAAATT+AGG - chr4_2:24032809-24032828 None:intergenic 25.0%
!! ATATATGCATGAGAAGTTTT+AGG - chr4_2:24033033-24033052 None:intergenic 25.0%
! TCTTTACAAGTAACAACAAA+AGG - chr4_2:24033197-24033216 None:intergenic 25.0%
!! TTGTTACTTGTAAAGATTTC+TGG + chr4_2:24033201-24033220 Msa0595170:intron 25.0%
! AAAACCAAAGAAAAAAAGGA+AGG + chr4_2:24033322-24033341 Msa0595170:CDS 25.0%
! ATCAAATACCATATGTTGTA+GGG - chr4_2:24033511-24033530 None:intergenic 25.0%
! TATCAAATACCATATGTTGT+AGG - chr4_2:24033512-24033531 None:intergenic 25.0%
! ACAACATATGGTATTTGATA+TGG + chr4_2:24033512-24033531 Msa0595170:intron 25.0%
!!! CTTTTTTCAACTACTACAAA+AGG + chr4_2:24033771-24033790 Msa0595170:intron 25.0%
! TAAATTTATTGTAAGGAGAG+TGG - chr4_2:24033866-24033885 None:intergenic 25.0%
! AATTCAAATCACAGTGAAAA+TGG - chr4_2:24033954-24033973 None:intergenic 25.0%
!!! TTTTGTTATCTGATAACCTA+TGG + chr4_2:24034013-24034032 Msa0595170:intron 25.0%
!! TTTGTTATCTGATAACCTAT+GGG + chr4_2:24034014-24034033 Msa0595170:intron 25.0%
! ATTCTCAAAAGAAAACAAAG+AGG + chr4_2:24034094-24034113 Msa0595170:CDS 25.0%
!!! TACTTTTCAATTGTTAGCTT+CGG - chr4_2:24034267-24034286 None:intergenic 25.0%
! ATAAATTTCTATTGAGGACT+AGG - chr4_2:24034645-24034664 None:intergenic 25.0%
! TCCTCAATAGAAATTTATGT+TGG + chr4_2:24034647-24034666 Msa0595170:intron 25.0%
! CCTCAATAGAAATTTATGTT+GGG + chr4_2:24034648-24034667 Msa0595170:intron 25.0%
! TTATGTTGGGAAAATTAAAG+AGG + chr4_2:24034661-24034680 Msa0595170:intron 25.0%
! TATGTTGGGAAAATTAAAGA+GGG + chr4_2:24034662-24034681 Msa0595170:intron 25.0%
! AAAATTAAAGAGGGAAGAAA+GGG + chr4_2:24034671-24034690 Msa0595170:intron 25.0%
!! TCTTCTTCAATTTTTACCTT+TGG + chr4_2:24034999-24035018 Msa0595170:intron 25.0%
! TAATAGACATAACACTTGAT+AGG - chr4_2:24035064-24035083 None:intergenic 25.0%
! AAGGATAATAAGCAAGTAAT+GGG - chr4_2:24035198-24035217 None:intergenic 25.0%
! AAAGGATAATAAGCAAGTAA+TGG - chr4_2:24035199-24035218 None:intergenic 25.0%
! TACTAAGAAGAATGAAACAA+AGG - chr4_2:24035217-24035236 None:intergenic 25.0%
! CTAAAACAAAATACTGTAGA+GGG - chr4_2:24035294-24035313 None:intergenic 25.0%
! ACTAAAACAAAATACTGTAG+AGG - chr4_2:24035295-24035314 None:intergenic 25.0%
!! GCCTCTCTTTAATTATATTT+TGG - chr4_2:24035503-24035522 None:intergenic 25.0%
!! GGTTCTAATCTTAAAATCTT+GGG + chr4_2:24035526-24035545 Msa0595170:intron 25.0%
! TCTTAAAATCTTGGGAAAAA+AGG + chr4_2:24035534-24035553 Msa0595170:intron 25.0%
! CTTAAAATCTTGGGAAAAAA+GGG + chr4_2:24035535-24035554 Msa0595170:intron 25.0%
! TTAATGATTTCCTTGGTTAT+TGG - chr4_2:24035689-24035708 None:intergenic 25.0%
!! GGTTTTCTATAAAAATTGGA+TGG - chr4_2:24036161-24036180 None:intergenic 25.0%
!! CACAGGTTTTCTATAAAAAT+TGG - chr4_2:24036165-24036184 None:intergenic 25.0%
!!! TCAGTTGTTTTCAAAGTTAA+AGG - chr4_2:24036237-24036256 None:intergenic 25.0%
! CTAAAAAACCGATGATAAAA+AGG + chr4_2:24036277-24036296 Msa0595170:intron 25.0%
! AAATAAGTTGTAGCATGTTA+GGG - chr4_2:24036346-24036365 None:intergenic 25.0%
! AAAATAAGTTGTAGCATGTT+AGG - chr4_2:24036347-24036366 None:intergenic 25.0%
!!! CTTATTTTGTGCAATAATCT+TGG + chr4_2:24036359-24036378 Msa0595170:intron 25.0%
! GTTAAGAAAAAGAAGAAGAA+AGG + chr4_2:24036458-24036477 Msa0595170:CDS 25.0%
! ATTTGACAATGTTCTAACTT+GGG - chr4_2:24036591-24036610 None:intergenic 25.0%
! ATTAATGTTTGTCTTCATAG+AGG - chr4_2:24036723-24036742 None:intergenic 25.0%
!! TACCAGAACATTTTATTATC+TGG + chr4_2:24036896-24036915 Msa0595170:intron 25.0%
! ATCCAGATAATAAAATGTTC+TGG - chr4_2:24036901-24036920 None:intergenic 25.0%
! GGATATAACTATTGTATACT+TGG + chr4_2:24036917-24036936 Msa0595170:intron 25.0%
!!! TTCTTTTTTTCATGATTCTC+AGG + chr4_2:24037087-24037106 Msa0595170:intron 25.0%
! AAGGTTATAAAGATTCTAGA+AGG - chr4_2:24037226-24037245 None:intergenic 25.0%
! TGTTATCATACAATTGAATC+CGG - chr4_2:24037442-24037461 None:intergenic 25.0%
! ATCTGAAAGAAACAAAACTT+TGG - chr4_2:24037549-24037568 None:intergenic 25.0%
!!! ATGGTGGTTTTAAGATATAT+GGG + chr4_2:24037613-24037632 Msa0595170:three_prime_UTR 25.0%
GAAAGATTACCATTGAAATG+TGG - chr4_2:24028154-24028173 None:intergenic 30.0%
CGGTGCAAATAACAATAAAA+TGG - chr4_2:24028206-24028225 None:intergenic 30.0%
TTCAAAATTGACGGTGAATT+TGG - chr4_2:24028295-24028314 None:intergenic 30.0%
! TTTGGAATACGAAATAATGG+TGG + chr4_2:24029014-24029033 Msa0595170:intron 30.0%
GTTAGGCAAAAACTATACTT+AGG - chr4_2:24029061-24029080 None:intergenic 30.0%
!!! TCGTGCACCTTTTTTTTTTT+TGG + chr4_2:24029431-24029450 Msa0595170:intron 30.0%
AATGTGTAAAAAATGCATGC+TGG - chr4_2:24029481-24029500 None:intergenic 30.0%
!! AAACTTGGTGCATTTGATTA+AGG + chr4_2:24029521-24029540 Msa0595170:intron 30.0%
CATTTGATTAAGGCTAAGTT+TGG + chr4_2:24029531-24029550 Msa0595170:intron 30.0%
ATTACATGATAATCCAACCA+TGG - chr4_2:24029703-24029722 None:intergenic 30.0%
AATGTGAACTTCTTAGAACT+AGG - chr4_2:24029947-24029966 None:intergenic 30.0%
GTTAAGCCTGAATCATTATT+TGG + chr4_2:24029980-24029999 Msa0595170:intron 30.0%
CACAATCCAAATAATGATTC+AGG - chr4_2:24029989-24030008 None:intergenic 30.0%
AGAAAAAGGACAATTGGATT+TGG - chr4_2:24030044-24030063 None:intergenic 30.0%
! CAATTGTCCTTTTTCTTTGT+GGG + chr4_2:24030048-24030067 Msa0595170:intron 30.0%
AAAGAAACCCACAAAGAAAA+AGG - chr4_2:24030058-24030077 None:intergenic 30.0%
!! AGATTTCTCTGTTTCTGTAT+TGG - chr4_2:24030133-24030152 None:intergenic 30.0%
TTCTTGCAAAGAGAAGAAAT+TGG - chr4_2:24030514-24030533 None:intergenic 30.0%
! TAAATCCTTTGTAAGGGTAT+TGG + chr4_2:24030537-24030556 Msa0595170:CDS 30.0%
!! ACTTGCTTTTCTCATCTTTA+AGG + chr4_2:24030730-24030749 Msa0595170:intron 30.0%
AATTATGTTTGTACTGAAGC+AGG + chr4_2:24030804-24030823 Msa0595170:intron 30.0%
ATTATGTTTGTACTGAAGCA+GGG + chr4_2:24030805-24030824 Msa0595170:intron 30.0%
! TTTTTATTATCCCCAACATC+CGG - chr4_2:24030872-24030891 None:intergenic 30.0%
! TAGTGCTACTGAAACAAAAT+TGG + chr4_2:24031066-24031085 Msa0595170:CDS 30.0%
ATTATGTTTGTACTGTAGCA+AGG + chr4_2:24031218-24031237 Msa0595170:intron 30.0%
AATTATGTTTGTACTGAAGC+AGG + chr4_2:24030804-24030823 Msa0595170:intron 30.0%
ATTATGTTTGTACTGAAGCA+GGG + chr4_2:24030805-24030824 Msa0595170:intron 30.0%
ATGAACACTCACTTATCATT+AGG - chr4_2:24031912-24031931 None:intergenic 30.0%
!! TCTCTATATTTGTTGTTCAC+AGG + chr4_2:24031972-24031991 Msa0595170:intron 30.0%
!!! TTAATTCCGGTCAGTTTTTT+TGG + chr4_2:24032249-24032268 Msa0595170:intron 30.0%
!!! GTTTTTTTGGAATGTCAAGT+TGG + chr4_2:24032262-24032281 Msa0595170:intron 30.0%
GAAACAAACACATACATTGT+TGG - chr4_2:24032323-24032342 None:intergenic 30.0%
TTGTGGATCTTTCTTACATT+AGG + chr4_2:24032573-24032592 Msa0595170:intron 30.0%
!!! TTAAATGATGCTGGTTTTGT+GGG + chr4_2:24032626-24032645 Msa0595170:intron 30.0%
!! TTTTTCAGCTGCAATGTTAA+CGG - chr4_2:24032742-24032761 None:intergenic 30.0%
AACATTGCAGCTGAAAAATT+CGG + chr4_2:24032744-24032763 Msa0595170:intron 30.0%
! TGAATACACCATTTTCAGTA+TGG - chr4_2:24032828-24032847 None:intergenic 30.0%
CTATAGCAGAATATGAGTAA+GGG - chr4_2:24032889-24032908 None:intergenic 30.0%
ACTATAGCAGAATATGAGTA+AGG - chr4_2:24032890-24032909 None:intergenic 30.0%
TACTCATATTCTGCTATAGT+AGG + chr4_2:24032890-24032909 Msa0595170:intron 30.0%
!! TGCTATAGTAGGAGTTTTAT+TGG + chr4_2:24032901-24032920 Msa0595170:intron 30.0%
AAATCAAAAGTAAAGGCAAC+TGG - chr4_2:24032930-24032949 None:intergenic 30.0%
TACCTAATAGCTATTCACTT+TGG + chr4_2:24033078-24033097 Msa0595170:intron 30.0%
!! ACTTGTAAAGATTTCTGGTT+TGG + chr4_2:24033206-24033225 Msa0595170:intron 30.0%
TTGTTGATCATTGTTGTCTT+TGG + chr4_2:24033229-24033248 Msa0595170:intron 30.0%
TAAAATACTACCTTCTTCAC+AGG + chr4_2:24033280-24033299 Msa0595170:CDS 30.0%
GTAGGGTTATTCTAGTATTA+CGG - chr4_2:24033494-24033513 None:intergenic 30.0%
TAGAATAACCCTACAACATA+TGG + chr4_2:24033500-24033519 Msa0595170:intron 30.0%
! GTTGAAAAAAGCACAATTGT+AGG - chr4_2:24033762-24033781 None:intergenic 30.0%
!!! AACTTATTTTGTGCACTTGA+GGG - chr4_2:24033828-24033847 None:intergenic 30.0%
!!! TAACTTATTTTGTGCACTTG+AGG - chr4_2:24033829-24033848 None:intergenic 30.0%
! AGTGATGCAGTATGAAATTT+TGG - chr4_2:24033930-24033949 None:intergenic 30.0%
ATAACCTATGGGAAATTAGA+AGG + chr4_2:24034025-24034044 Msa0595170:intron 30.0%
TAACCTATGGGAAATTAGAA+GGG + chr4_2:24034026-24034045 Msa0595170:intron 30.0%
TATATCCCTTACTACGATAA+TGG - chr4_2:24034322-24034341 None:intergenic 30.0%
ACCAAATCAATTTCTTGTGA+TGG + chr4_2:24034371-24034390 Msa0595170:intron 30.0%
TCCATCACAAGAAATTGATT+TGG - chr4_2:24034375-24034394 None:intergenic 30.0%
TTGCAAAACTGCACAAATTT+AGG - chr4_2:24034464-24034483 None:intergenic 30.0%
CGTTGTTCAAAGAGATTATT+AGG - chr4_2:24034554-24034573 None:intergenic 30.0%
CCCAACATAAATTTCTATTG+AGG - chr4_2:24034651-24034670 None:intergenic 30.0%
GAAAATTAAAGAGGGAAGAA+AGG + chr4_2:24034670-24034689 Msa0595170:intron 30.0%
ATGTGAAAGATAACTGCAAA+AGG - chr4_2:24034868-24034887 None:intergenic 30.0%
GAATTAAAATGCACAACTAC+TGG - chr4_2:24034913-24034932 None:intergenic 30.0%
CTCACAGAATATAGAAAGTA+AGG - chr4_2:24034935-24034954 None:intergenic 30.0%
! AGAATTCATGTTTTCCCATT+TGG - chr4_2:24035330-24035349 None:intergenic 30.0%
ATATAATTAAAGAGAGGCTG+CGG + chr4_2:24035505-24035524 Msa0595170:intron 30.0%
! CGGTTCTAATCTTAAAATCT+TGG + chr4_2:24035525-24035544 Msa0595170:intron 30.0%
TATCATTGTTGTGTTGTGAT+TGG + chr4_2:24035565-24035584 Msa0595170:intron 30.0%
ATCATTGTTGTGTTGTGATT+GGG + chr4_2:24035566-24035585 Msa0595170:intron 30.0%
!! TTAAGCGTACACTTTAAGAT+GGG - chr4_2:24035757-24035776 None:intergenic 30.0%
! TTTAAGCGTACACTTTAAGA+TGG - chr4_2:24035758-24035777 None:intergenic 30.0%
GCAAAAATGAAAAAGAAGAG+TGG - chr4_2:24035829-24035848 None:intergenic 30.0%
GCATACAAAAAAGAAATACG+AGG - chr4_2:24035947-24035966 None:intergenic 30.0%
ATGAAACCATGACTACAATT+AGG - chr4_2:24036014-24036033 None:intergenic 30.0%
CCCAAAAAAGTAAATGCATT+GGG - chr4_2:24036075-24036094 None:intergenic 30.0%
!!! CCCAATGCATTTACTTTTTT+GGG + chr4_2:24036072-24036091 Msa0595170:intron 30.0%
TCCCAAAAAAGTAAATGCAT+TGG - chr4_2:24036076-24036095 None:intergenic 30.0%
AAAACCTGTGAAATACTTGT+TGG + chr4_2:24036175-24036194 Msa0595170:intron 30.0%
AAACCTGTGAAATACTTGTT+GGG + chr4_2:24036176-24036195 Msa0595170:intron 30.0%
! TTGTTGGGTAATGGTATAAT+TGG + chr4_2:24036191-24036210 Msa0595170:intron 30.0%
! CCATCTTTCCTTTTTATCAT+CGG - chr4_2:24036288-24036307 None:intergenic 30.0%
AAGAAGAAAGGTAAAAGTCA+GGG + chr4_2:24036470-24036489 Msa0595170:CDS 30.0%
CATTTGACAATGTTCTAACT+TGG - chr4_2:24036592-24036611 None:intergenic 30.0%
CAAGTTAGAACATTGTCAAA+TGG + chr4_2:24036590-24036609 Msa0595170:CDS 30.0%
TAAATGGTGATATGTTACCA+AGG - chr4_2:24036878-24036897 None:intergenic 30.0%
!!! CTTCTTGTTTTCTCTAATTG+TGG + chr4_2:24037028-24037047 Msa0595170:intron 30.0%
AAAATCACATACGTCATTGA+TGG - chr4_2:24037150-24037169 None:intergenic 30.0%
TGAAACATGCACATATTAGA+AGG - chr4_2:24037245-24037264 None:intergenic 30.0%
TTCTAATATGTGCATGTTTC+AGG + chr4_2:24037244-24037263 Msa0595170:intron 30.0%
AAAACATACCACCAAATTCA+TGG + chr4_2:24037289-24037308 Msa0595170:CDS 30.0%
TCATAAACCAACCATGAATT+TGG - chr4_2:24037303-24037322 None:intergenic 30.0%
GAGTGAATATGGGAAATATA+TGG + chr4_2:24037383-24037402 Msa0595170:intron 30.0%
ATACCAAAAATGAATCACGA+GGG - chr4_2:24037494-24037513 None:intergenic 30.0%
TATACCAAAAATGAATCACG+AGG - chr4_2:24037495-24037514 None:intergenic 30.0%
!!! GTGATTCATTTTTGGTATAG+AGG + chr4_2:24037496-24037515 Msa0595170:three_prime_UTR 30.0%
!!! CATGGTGGTTTTAAGATATA+TGG + chr4_2:24037612-24037631 Msa0595170:three_prime_UTR 30.0%
!!! GGTTTTAAGATATATGGGAT+TGG + chr4_2:24037618-24037637 Msa0595170:three_prime_UTR 30.0%
!!! CTCTGAAACAATGGCTTTTT+GGG + chr4_2:24027986-24028005 Msa0595170:CDS 35.0%
!! TCTGAAACAATGGCTTTTTG+GGG + chr4_2:24027987-24028006 Msa0595170:CDS 35.0%
GAATCATAAGAGTGAGTGAA+AGG - chr4_2:24028116-24028135 None:intergenic 35.0%
CACTCTTATGATTCTTCCAA+AGG + chr4_2:24028122-24028141 Msa0595170:CDS 35.0%
AGATTACCATTGAAATGTGG+AGG - chr4_2:24028151-24028170 None:intergenic 35.0%
! AAATGCATTTAGGGTGTCTT+TGG + chr4_2:24028313-24028332 Msa0595170:intron 35.0%
!! AAAAAGCTGAAGGTACTTTC+TGG + chr4_2:24028402-24028421 Msa0595170:intron 35.0%
!! GATTTTGGAAAAGCTACTAG+AGG + chr4_2:24028487-24028506 Msa0595170:intron 35.0%
AAAGTGAGCTTCATGTAAAG+TGG + chr4_2:24028687-24028706 Msa0595170:intron 35.0%
TACACTTCCAGAATCAATTC+TGG + chr4_2:24028824-24028843 Msa0595170:intron 35.0%
!! TAGGTTGATGATGGTAAGTT+AGG - chr4_2:24029078-24029097 None:intergenic 35.0%
AACAGATTAAGTGCAAGCTT+AGG - chr4_2:24029097-24029116 None:intergenic 35.0%
! TAAAGAGAGCACAGATAAAC+AGG - chr4_2:24029234-24029253 None:intergenic 35.0%
TGAGTCCTTGCAATTGAATT+TGG + chr4_2:24029266-24029285 Msa0595170:CDS 35.0%
AAGCTCCAAATTCAATTGCA+AGG - chr4_2:24029274-24029293 None:intergenic 35.0%
AATGTTATTCTTTCCGTCCT+TGG + chr4_2:24029306-24029325 Msa0595170:CDS 35.0%
CATTCAGGAAAATGGAAACT+TGG + chr4_2:24029506-24029525 Msa0595170:intron 35.0%
GTGCTTATAAAGTTAACCGA+AGG + chr4_2:24029640-24029659 Msa0595170:intron 35.0%
! AAGTTGATTAAGTCCATGGT+TGG + chr4_2:24029687-24029706 Msa0595170:intron 35.0%
GAACTTCTTAGAACTAGGTT+GGG - chr4_2:24029942-24029961 None:intergenic 35.0%
TGAACTTCTTAGAACTAGGT+TGG - chr4_2:24029943-24029962 None:intergenic 35.0%
CCACAAAGAAAAAGGACAAT+TGG - chr4_2:24030050-24030069 None:intergenic 35.0%
! CCAATTGTCCTTTTTCTTTG+TGG + chr4_2:24030047-24030066 Msa0595170:intron 35.0%
CTTGATTTCCTTCACTACAA+TGG + chr4_2:24030080-24030099 Msa0595170:intron 35.0%
TTTCCTTCACTACAATGGAA+AGG + chr4_2:24030085-24030104 Msa0595170:intron 35.0%
TTCCTTCACTACAATGGAAA+GGG + chr4_2:24030086-24030105 Msa0595170:intron 35.0%
ACAATGGAAAGGGAATCATA+TGG + chr4_2:24030096-24030115 Msa0595170:intron 35.0%
ATATTTGAGCTTGCCTTCAT+TGG - chr4_2:24030238-24030257 None:intergenic 35.0%
ACATCATCAAGGGATTGAAA+TGG - chr4_2:24030284-24030303 None:intergenic 35.0%
AATGATGCAGACATCATCAA+GGG - chr4_2:24030294-24030313 None:intergenic 35.0%
AAATGATGCAGACATCATCA+AGG - chr4_2:24030295-24030314 None:intergenic 35.0%
! TGACAGTTTTCTTTCCTTCA+AGG - chr4_2:24030441-24030460 None:intergenic 35.0%
TTTCAGTAGCACTATTCTCA+TGG - chr4_2:24031060-24031079 None:intergenic 35.0%
! GAAACCAAGAGTTCTAGTAA+TGG + chr4_2:24031336-24031355 Msa0595170:CDS 35.0%
TTGTGCAGCATTATCTAGTT+CGG - chr4_2:24030936-24030955 None:intergenic 35.0%
AGATGAGCCAAAAATGAACA+TGG + chr4_2:24030955-24030974 Msa0595170:CDS 35.0%
!! GTTGATGATGGCAAAAAAGA+CGG + chr4_2:24031462-24031481 Msa0595170:CDS 35.0%
TCGCAGATATTCAAACTCAT+AGG + chr4_2:24031538-24031557 Msa0595170:CDS 35.0%
GCAAGTGTGTATTTGAACAA+TGG - chr4_2:24031584-24031603 None:intergenic 35.0%
! TTTTTCATATCCCCAACATC+CGG - chr4_2:24031741-24031760 None:intergenic 35.0%
ATGTTCATTACTAGAGCTCT+TGG - chr4_2:24031799-24031818 None:intergenic 35.0%
! AAGCACTCGTAATATTTCTG+CGG - chr4_2:24032094-24032113 None:intergenic 35.0%
GAGTGCTTGATTTAAAGATG+AGG + chr4_2:24032106-24032125 Msa0595170:intron 35.0%
!! CAGGTTGCTATTTATATCTC+AGG + chr4_2:24032129-24032148 Msa0595170:intron 35.0%
ACTTCTATTTAGTGTCAAGC+TGG + chr4_2:24032205-24032224 Msa0595170:intron 35.0%
GACATTCCAAAAAAACTGAC+CGG - chr4_2:24032258-24032277 None:intergenic 35.0%
TTTGTTTCAAATGACCCATG+TGG + chr4_2:24032335-24032354 Msa0595170:intron 35.0%
TATACTGTACATTGCCACAT+GGG - chr4_2:24032352-24032371 None:intergenic 35.0%
TATGAATCTATGTCACCACT+TGG + chr4_2:24032411-24032430 Msa0595170:intron 35.0%
!!! GCGGTTACTTTTTACTTTGA+CGG + chr4_2:24032520-24032539 Msa0595170:intron 35.0%
!!! CGGTTACTTTTTACTTTGAC+GGG + chr4_2:24032521-24032540 Msa0595170:intron 35.0%
GATCTTTCTTACATTAGGCA+TGG + chr4_2:24032578-24032597 Msa0595170:intron 35.0%
TCAATAGGCTTAAATGATGC+TGG + chr4_2:24032617-24032636 Msa0595170:intron 35.0%
!!! CTTAAATGATGCTGGTTTTG+TGG + chr4_2:24032625-24032644 Msa0595170:intron 35.0%
!! TTTTCTTCTAAGAGTCAGAC+TGG + chr4_2:24032712-24032731 Msa0595170:intron 35.0%
ACATTGCAGCTGAAAAATTC+GGG + chr4_2:24032745-24032764 Msa0595170:intron 35.0%
AGTGGTTACCATACTGAAAA+TGG + chr4_2:24032817-24032836 Msa0595170:intron 35.0%
TGCCAAAGTGAATAGCTATT+AGG - chr4_2:24033083-24033102 None:intergenic 35.0%
GCAATGTTCTTGAACATGAA+AGG + chr4_2:24033145-24033164 Msa0595170:intron 35.0%
TCATTGTTGTCTTTGGTATG+AGG + chr4_2:24033236-24033255 Msa0595170:intron 35.0%
! AGAAGGTAGTATTTTATCCG+TGG - chr4_2:24033276-24033295 None:intergenic 35.0%
CAAAGAAAAAAAGGAAGGAG+CGG + chr4_2:24033327-24033346 Msa0595170:CDS 35.0%
AGTAATCAGGACACAGTTAA+TGG + chr4_2:24033425-24033444 Msa0595170:CDS 35.0%
GTAATCAGGACACAGTTAAT+GGG + chr4_2:24033426-24033445 Msa0595170:CDS 35.0%
GAGTTCTATTGCATATATCC+AGG - chr4_2:24033564-24033583 None:intergenic 35.0%
TCAATGTAGATGTCATGTTC+AGG + chr4_2:24033897-24033916 Msa0595170:intron 35.0%
ATTAAAATTGCGTTGCATCC+TGG + chr4_2:24033971-24033990 Msa0595170:intron 35.0%
!!! TTAGTCTTCTCTTTTTTGCC+AGG - chr4_2:24033992-24034011 None:intergenic 35.0%
AACAAAGCTTCATATCCTGA+AGG + chr4_2:24034135-24034154 Msa0595170:CDS 35.0%
AAACTTATCACTCAGACCAT+CGG - chr4_2:24034223-24034242 None:intergenic 35.0%
!! CTACGATAATGGAGAGATAT+TGG - chr4_2:24034311-24034330 None:intergenic 35.0%
ATCTCTCCATTATCGTAGTA+AGG + chr4_2:24034313-24034332 Msa0595170:intron 35.0%
TCTCTCCATTATCGTAGTAA+GGG + chr4_2:24034314-24034333 Msa0595170:intron 35.0%
GATTCCATCATTCATCTCTT+TGG + chr4_2:24034342-24034361 Msa0595170:intron 35.0%
ATTGCCAAAGAGATGAATGA+TGG - chr4_2:24034349-24034368 None:intergenic 35.0%
TAGGACCAAATGACATAAGA+TGG - chr4_2:24034584-24034603 None:intergenic 35.0%
TTATCTGGGGAAATCATTAG+TGG + chr4_2:24034779-24034798 Msa0595170:intron 35.0%
GGAAATCATTAGTGGTAGTT+AGG + chr4_2:24034787-24034806 Msa0595170:intron 35.0%
CAGACAATATTGTTCTCTGT+AGG + chr4_2:24034811-24034830 Msa0595170:intron 35.0%
GCAAAAGGATGAATATCCTA+AGG - chr4_2:24034853-24034872 None:intergenic 35.0%
GCAACAAACTATCTTACCAT+TGG + chr4_2:24034973-24034992 Msa0595170:intron 35.0%
AAATTGAAGAAGACTGCCAA+TGG - chr4_2:24034992-24035011 None:intergenic 35.0%
!! TAAGCAAGTAATGGGCATTA+AGG - chr4_2:24035190-24035209 None:intergenic 35.0%
! ATTCATGTTTTCCCATTTGG+TGG - chr4_2:24035327-24035346 None:intergenic 35.0%
GCATGAGTTAATGATTTCCT+TGG - chr4_2:24035696-24035715 None:intergenic 35.0%
!! ACTTTAAGATGGGGTAACAT+AGG - chr4_2:24035747-24035766 None:intergenic 35.0%
!! TAAGCGTACACTTTAAGATG+GGG - chr4_2:24035756-24035775 None:intergenic 35.0%
ACAGTTTGAGTGAGAATAAG+TGG - chr4_2:24035794-24035813 None:intergenic 35.0%
ATATGCGCCAGTAACAAAAT+GGG - chr4_2:24035973-24035992 None:intergenic 35.0%
AATATGCGCCAGTAACAAAA+TGG - chr4_2:24035974-24035993 None:intergenic 35.0%
AACTCTCCTAATTGTAGTCA+TGG + chr4_2:24036005-24036024 Msa0595170:intron 35.0%
TTCATGCTGTGTGAGTTAAA+AGG + chr4_2:24036044-24036063 Msa0595170:intron 35.0%
!!! GCCCAATGCATTTACTTTTT+TGG + chr4_2:24036071-24036090 Msa0595170:intron 35.0%
TTACCCAACAAGTATTTCAC+AGG - chr4_2:24036182-24036201 None:intergenic 35.0%
! GTGAAATACTTGTTGGGTAA+TGG + chr4_2:24036182-24036201 Msa0595170:intron 35.0%
CCGATGATAAAAAGGAAAGA+TGG + chr4_2:24036285-24036304 Msa0595170:intron 35.0%
GAAGAAGAAAGGTAAAAGTC+AGG + chr4_2:24036469-24036488 Msa0595170:CDS 35.0%
TTATTCAAGAGCTTGAGACA+GGG + chr4_2:24036618-24036637 Msa0595170:CDS 35.0%
TTGAGACAGGGAAAGAAAAT+GGG + chr4_2:24036630-24036649 Msa0595170:CDS 35.0%
AATGGGAAAATTGCTACAGT+AGG + chr4_2:24036647-24036666 Msa0595170:CDS 35.0%
ATGGGAAAATTGCTACAGTA+GGG + chr4_2:24036648-24036667 Msa0595170:CDS 35.0%
AATTGCTACAGTAGGGAAAA+AGG + chr4_2:24036655-24036674 Msa0595170:CDS 35.0%
TTACCAAGGCGAAATTTGAA+AGG - chr4_2:24036864-24036883 None:intergenic 35.0%
AGGTAAAGGAGAAGTTATTG+AGG + chr4_2:24036965-24036984 Msa0595170:intron 35.0%
GGTAAAGGAGAAGTTATTGA+GGG + chr4_2:24036966-24036985 Msa0595170:intron 35.0%
TAAACCAACCATGAATTTGG+TGG - chr4_2:24037300-24037319 None:intergenic 35.0%
! GTTGGTTTATGACTTTGAAC+TGG + chr4_2:24037311-24037330 Msa0595170:CDS 35.0%
TGGTCATGTTTGAGTGAATA+TGG + chr4_2:24037372-24037391 Msa0595170:three_prime_UTR 35.0%
GGTCATGTTTGAGTGAATAT+GGG + chr4_2:24037373-24037392 Msa0595170:three_prime_UTR 35.0%
TATGGGAAATATATGGAGTC+CGG + chr4_2:24037390-24037409 Msa0595170:intron 35.0%
! ACAGTTTTCTGTTGAATCTC+TGG + chr4_2:24037459-24037478 Msa0595170:three_prime_UTR 35.0%
TACCAAAAATGAATCACGAG+GGG - chr4_2:24037493-24037512 None:intergenic 35.0%
!! TTTTTGGTATAGAGGACAGT+TGG + chr4_2:24037504-24037523 Msa0595170:three_prime_UTR 35.0%
CAACATTATATGTGGAGACA+TGG - chr4_2:24037712-24037731 None:intergenic 35.0%
!! CAACTCTTCCTCTGAAACAA+TGG + chr4_2:24027977-24027996 Msa0595170:CDS 40.0%
CCAAAAAGCCATTGTTTCAG+AGG - chr4_2:24027988-24028007 None:intergenic 40.0%
!!! CCTCTGAAACAATGGCTTTT+TGG + chr4_2:24027985-24028004 Msa0595170:CDS 40.0%
GTGATTGTGATTACGATTGC+AGG + chr4_2:24028068-24028087 Msa0595170:intron 40.0%
! CATTTAGGGTGTCTTTGGTT+TGG + chr4_2:24028318-24028337 Msa0595170:intron 40.0%
CAGAACGAAACATGCACTAA+GGG - chr4_2:24028642-24028661 None:intergenic 40.0%
! CGTAGTGCATGTTTGGAATA+CGG + chr4_2:24028863-24028882 Msa0595170:intron 40.0%
CGGTGAGTTTGACAAAATCA+TGG + chr4_2:24028883-24028902 Msa0595170:intron 40.0%
CATCGAGTGCATATTTGGAT+TGG - chr4_2:24028990-24029009 None:intergenic 40.0%
ACATGCATCGAGTGCATATT+TGG - chr4_2:24028995-24029014 None:intergenic 40.0%
ATATGCACTCGATGCATGTT+TGG + chr4_2:24028996-24029015 Msa0595170:intron 40.0%
TAGGAGCCTCAACAAAATCA+TGG - chr4_2:24029042-24029061 None:intergenic 40.0%
! TCTGAATTTCAGGCCACTTT+GGG + chr4_2:24029153-24029172 Msa0595170:intron 40.0%
AAGCACTCTGCAATGTAATG+TGG + chr4_2:24029197-24029216 Msa0595170:CDS 40.0%
AGCACTCTGCAATGTAATGT+GGG + chr4_2:24029198-24029217 Msa0595170:CDS 40.0%
TATCTGTGCTCTCTTTATCC+AGG + chr4_2:24029237-24029256 Msa0595170:CDS 40.0%
! GCAATTGAATTTGGAGCTTG+AGG + chr4_2:24029275-24029294 Msa0595170:CDS 40.0%
! AATTTGGAGCTTGAGGAAGA+TGG + chr4_2:24029282-24029301 Msa0595170:CDS 40.0%
CATCCATAGTATTGCCATAG+CGG - chr4_2:24029374-24029393 None:intergenic 40.0%
TCTATTCTCAGAAGCTCCTT+CGG - chr4_2:24029659-24029678 None:intergenic 40.0%
! GAGCTTCTGAGAATAGAGTT+GGG + chr4_2:24029662-24029681 Msa0595170:intron 40.0%
! AGCTTCTGAGAATAGAGTTG+GGG + chr4_2:24029663-24029682 Msa0595170:intron 40.0%
GTTCACATTGAGTCCTTTGA+TGG + chr4_2:24029958-24029977 Msa0595170:intron 40.0%
GATTCAGGCTTAACCATCAA+AGG - chr4_2:24029974-24029993 None:intergenic 40.0%
TTCCCTTTCCATTGTAGTGA+AGG - chr4_2:24030091-24030110 None:intergenic 40.0%
GCATCTCCTATTTCCAATGA+AGG + chr4_2:24030222-24030241 Msa0595170:intron 40.0%
AGCTTGCCTTCATTGGAAAT+AGG - chr4_2:24030231-24030250 None:intergenic 40.0%
TTTGACTGTGATTACTGCAG+AGG + chr4_2:24030321-24030340 Msa0595170:intron 40.0%
CTGATCCAATACCCTTACAA+AGG - chr4_2:24030545-24030564 None:intergenic 40.0%
!! CTTTGTAAGGGTATTGGATC+AGG + chr4_2:24030543-24030562 Msa0595170:CDS 40.0%
!! AAGGGTATTGGATCAGGAAA+TGG + chr4_2:24030549-24030568 Msa0595170:CDS 40.0%
GACAAAGAAGCAATTGATGC+TGG + chr4_2:24030583-24030602 Msa0595170:CDS 40.0%
TCACTGAGAGTCAGATTCAT+AGG + chr4_2:24030671-24030690 Msa0595170:CDS 40.0%
! AGCATTATCTAGTTCAGTGG+AGG - chr4_2:24030930-24030949 None:intergenic 40.0%
! TGCAGCATTATCTAGTTCAG+TGG - chr4_2:24030933-24030952 None:intergenic 40.0%
TTCCTGATCAAAGTGATCCT+GGG - chr4_2:24030981-24031000 None:intergenic 40.0%
TTTCCTGATCAAAGTGATCC+TGG - chr4_2:24030982-24031001 None:intergenic 40.0%
GTTGATGCTGGCAAAAAAGA+CGG + chr4_2:24031028-24031047 Msa0595170:CDS 40.0%
ATCGCCATTACTAGAACTCT+TGG - chr4_2:24031343-24031362 None:intergenic 40.0%
!! GACAAAGAAGCAGTTGATGA+TGG + chr4_2:24031450-24031469 Msa0595170:CDS 40.0%
TTGCGCAGCATTATCTAGAT+CGG - chr4_2:24031826-24031845 None:intergenic 40.0%
! TCCTCGTCTGTGTTCATTTT+TGG - chr4_2:24031855-24031874 None:intergenic 40.0%
! ACTTATCATTAGGTTGCTGC+TGG - chr4_2:24031902-24031921 None:intergenic 40.0%
GCTTGATTTAAAGATGAGGC+AGG + chr4_2:24032110-24032129 Msa0595170:intron 40.0%
CTATACTGTACATTGCCACA+TGG - chr4_2:24032353-24032372 None:intergenic 40.0%
TGTGGCAATGTACAGTATAG+TGG + chr4_2:24032353-24032372 Msa0595170:intron 40.0%
CATTGCAGCTGAAAAATTCG+GGG + chr4_2:24032746-24032765 Msa0595170:intron 40.0%
CTTACACCTTTGTTCTGCAT+CGG + chr4_2:24033113-24033132 Msa0595170:intron 40.0%
ATACTACCTTCTTCACAGGT+TGG + chr4_2:24033284-24033303 Msa0595170:CDS 40.0%
!!! CGCTCCTTCCTTTTTTTCTT+TGG - chr4_2:24033329-24033348 None:intergenic 40.0%
AATGTTGTTAACCTGCCTCA+GGG + chr4_2:24033392-24033411 Msa0595170:CDS 40.0%
TTACTGTGTTCATTTCCCTG+AGG - chr4_2:24033410-24033429 None:intergenic 40.0%
GGGAAATGAACACAGTAATC+AGG + chr4_2:24033412-24033431 Msa0595170:CDS 40.0%
TTGAAAGACTCTTCATGTCC+TGG + chr4_2:24033543-24033562 Msa0595170:intron 40.0%
TCAAGAGAAGTCATACCAGA+AGG - chr4_2:24033705-24033724 None:intergenic 40.0%
AAAATGCGCGGTATATCGAA+AGG - chr4_2:24033733-24033752 None:intergenic 40.0%
TGTAGGAAGAACAAAATGCG+CGG - chr4_2:24033745-24033764 None:intergenic 40.0%
CATCCCTTCTAATTTCCCAT+AGG - chr4_2:24034032-24034051 None:intergenic 40.0%
!! CTTTTGAGAATCTGTCTCAG+AGG - chr4_2:24034085-24034104 None:intergenic 40.0%
AGAGCAAAGCAAAGGAATGA+TGG - chr4_2:24034527-24034546 None:intergenic 40.0%
TAGGTCTAAGAGCAAAGCAA+AGG - chr4_2:24034535-24034554 None:intergenic 40.0%
GTGAGCCATCTTATGTCATT+TGG + chr4_2:24034576-24034595 Msa0595170:intron 40.0%
! TGTCATTTGGTCCTACTATG+TGG + chr4_2:24034589-24034608 Msa0595170:intron 40.0%
AGTCATGAGAACCCATAGTT+GGG - chr4_2:24034617-24034636 None:intergenic 40.0%
! GAAGAAAGGGCATACTTATG+TGG + chr4_2:24034684-24034703 Msa0595170:intron 40.0%
TAGTGTGTTATCTCCAACTC+TGG + chr4_2:24034720-24034739 Msa0595170:intron 40.0%
AGTGTGTTATCTCCAACTCT+GGG + chr4_2:24034721-24034740 Msa0595170:intron 40.0%
TATTGTTCTCTGTAGGAGCT+CGG + chr4_2:24034818-24034837 Msa0595170:intron 40.0%
TTCTGTGAGTTGCTGTGATT+CGG + chr4_2:24034946-24034965 Msa0595170:intron 40.0%
ATGGGCATTAAGGATGATGA+TGG - chr4_2:24035180-24035199 None:intergenic 40.0%
! AGTTTTCACAGACCACCAAA+TGG + chr4_2:24035312-24035331 Msa0595170:intron 40.0%
! GTTTTCACAGACCACCAAAT+GGG + chr4_2:24035313-24035332 Msa0595170:intron 40.0%
GTCAGAGAGATTGAAACAGT+AGG + chr4_2:24035471-24035490 Msa0595170:intron 40.0%
AGGAAGTGATCCAATAACCA+AGG + chr4_2:24035676-24035695 Msa0595170:intron 40.0%
TTGTTACTGGCGCATATTTG+TGG + chr4_2:24035976-24035995 Msa0595170:intron 40.0%
! TCTTCGGATTGATTTCCATC+AGG - chr4_2:24036431-24036450 None:intergenic 40.0%
!! TGAGCAAAGTACTGAGATGA+TGG + chr4_2:24036529-24036548 Msa0595170:CDS 40.0%
!! AAGTACTGAGATGATGGAAG+AGG + chr4_2:24036535-24036554 Msa0595170:CDS 40.0%
GGAAGAGGATGGAAAAAATG+TGG + chr4_2:24036550-24036569 Msa0595170:CDS 40.0%
AGAGGATGGAAAAAATGTGG+AGG + chr4_2:24036553-24036572 Msa0595170:CDS 40.0%
GACAATGTTCTAACTTGGGA+AGG - chr4_2:24036587-24036606 None:intergenic 40.0%
GTTATTCAAGAGCTTGAGAC+AGG + chr4_2:24036617-24036636 Msa0595170:CDS 40.0%
CTTGAGACAGGGAAAGAAAA+TGG + chr4_2:24036629-24036648 Msa0595170:CDS 40.0%
TGATGCTGATCTGTAAGCAA+AGG - chr4_2:24036782-24036801 None:intergenic 40.0%
CAGATCAGCATCAATTACAC+TGG + chr4_2:24036789-24036808 Msa0595170:intron 40.0%
! CAATTACACTGGCAAGTTGA+AGG + chr4_2:24036800-24036819 Msa0595170:CDS 40.0%
! ACTGGCAAGTTGAAGGAAAA+CGG + chr4_2:24036807-24036826 Msa0595170:CDS 40.0%
GTGGTGATTGAATCAAATGC+TGG + chr4_2:24036831-24036850 Msa0595170:CDS 40.0%
! ACACTTACATTGCCTTTTGC+AGG + chr4_2:24036945-24036964 Msa0595170:intron 40.0%
! ACATTGCCTTTTGCAGGTAA+AGG + chr4_2:24036951-24036970 Msa0595170:intron 40.0%
ACTTCTCCTTTACCTGCAAA+AGG - chr4_2:24036960-24036979 None:intergenic 40.0%
AAGGAGAAGTTATTGAGGGT+TGG + chr4_2:24036970-24036989 Msa0595170:CDS 40.0%
AGGAGAAGTTATTGAGGGTT+GGG + chr4_2:24036971-24036990 Msa0595170:CDS 40.0%
GTTATTGAGGGTTGGGATAT+TGG + chr4_2:24036978-24036997 Msa0595170:CDS 40.0%
ATCACATACGTCATTGATGG+TGG - chr4_2:24037147-24037166 None:intergenic 40.0%
! TGCATGTTTCAGGTCTAAGA+AGG + chr4_2:24037254-24037273 Msa0595170:intron 40.0%
! TGTTTCAGGTCTAAGAAGGA+TGG + chr4_2:24037258-24037277 Msa0595170:intron 40.0%
CATACCACCAAATTCATGGT+TGG + chr4_2:24037293-24037312 Msa0595170:CDS 40.0%
TTACTCCATCCAACTGATTG+TGG + chr4_2:24037348-24037367 Msa0595170:three_prime_UTR 40.0%
GCCAAACAAACTCTACTCTC+CGG + chr4_2:24027918-24027937 Msa0595170:CDS 45.0%
CCAAACAAACTCTACTCTCC+GGG + chr4_2:24027919-24027938 Msa0595170:CDS 45.0%
AAACTCTACTCTCCGGGTTT+AGG + chr4_2:24027925-24027944 Msa0595170:CDS 45.0%
AACTCTACTCTCCGGGTTTA+GGG + chr4_2:24027926-24027945 Msa0595170:CDS 45.0%
!! TCTCCGGGTTTAGGGTTTTT+AGG + chr4_2:24027934-24027953 Msa0595170:CDS 45.0%
CCTCCTAAAAACCCTAAACC+CGG - chr4_2:24027940-24027959 None:intergenic 45.0%
!! GCAGGTGTTGAAATCAAACC+TGG + chr4_2:24028086-24028105 Msa0595170:intron 45.0%
! GAGTGAGTGAAAGGTTTTCC+AGG - chr4_2:24028107-24028126 None:intergenic 45.0%
GCAGAACGAAACATGCACTA+AGG - chr4_2:24028643-24028662 None:intergenic 45.0%
ACATGCACTACGTTCACGTT+TGG - chr4_2:24028855-24028874 None:intergenic 45.0%
ACGTGAACGTAGTGCATGTT+TGG + chr4_2:24028856-24028875 Msa0595170:intron 45.0%
! GTGGCACCATGATTTTGTTG+AGG + chr4_2:24029033-24029052 Msa0595170:intron 45.0%
!! GTGCAAGCTTAGGTTGATGA+TGG - chr4_2:24029087-24029106 None:intergenic 45.0%
CTCTGAATTTCAGGCCACTT+TGG + chr4_2:24029152-24029171 Msa0595170:intron 45.0%
! GGAGCTTCTGAGAATAGAGT+TGG + chr4_2:24029661-24029680 Msa0595170:intron 45.0%
! GCTTCTGAGAATAGAGTTGG+GGG + chr4_2:24029664-24029683 Msa0595170:intron 45.0%
! GGGGAAGTTGATTAAGTCCA+TGG + chr4_2:24029683-24029702 Msa0595170:intron 45.0%
!! GAAGTACCAGTTGGTAGAGT+CGG + chr4_2:24030402-24030421 Msa0595170:CDS 45.0%
GTAGAGTCGGATGATGATAG+CGG + chr4_2:24030415-24030434 Msa0595170:CDS 45.0%
CAGTGTGCATGTACAATCTC+AGG + chr4_2:24030465-24030484 Msa0595170:CDS 45.0%
GGAACTGTCAACTGATCTGA+AGG - chr4_2:24030839-24030858 None:intergenic 45.0%
! TCCTGGGACGTGTTCATTTT+TGG - chr4_2:24030965-24030984 None:intergenic 45.0%
! GACAGAGAAACAGTTGATGC+TGG + chr4_2:24031016-24031035 Msa0595170:CDS 45.0%
TTGCAGATAGTCAGACTCAC+AGG + chr4_2:24031104-24031123 Msa0595170:CDS 45.0%
AGCTGAACCTTCTGATCACT+TGG + chr4_2:24031242-24031261 Msa0595170:CDS 45.0%
! TGCAGCATTATCTAGTTCGG+TGG - chr4_2:24031367-24031386 None:intergenic 45.0%
! TCCTGGGCCATGTTCATTTT+TGG - chr4_2:24031399-24031418 None:intergenic 45.0%
TTCCTGATCCAAGAGATCCT+GGG - chr4_2:24031415-24031434 None:intergenic 45.0%
TTTCCTGATCCAAGAGATCC+TGG - chr4_2:24031416-24031435 None:intergenic 45.0%
GGATCTCTTGGATCAGGAAA+TGG + chr4_2:24031416-24031435 Msa0595170:CDS 45.0%
GCCAAAAATGAACACAGACG+AGG + chr4_2:24031851-24031870 Msa0595170:CDS 45.0%
CAGAGATGTGAGTCAACATG+TGG - chr4_2:24032382-24032401 None:intergenic 45.0%
!! CTATGTCACCACTTGGCTTT+TGG + chr4_2:24032418-24032437 Msa0595170:intron 45.0%
CTCACTCACTCGTTAATTCG+AGG - chr4_2:24032459-24032478 None:intergenic 45.0%
GAGTGAGTGAGAAAAGACAC+TGG + chr4_2:24032468-24032487 Msa0595170:intron 45.0%
GAGAAAAGACACTGGTGAGA+TGG + chr4_2:24032476-24032495 Msa0595170:intron 45.0%
AAAAGACACTGGTGAGATGG+TGG + chr4_2:24032479-24032498 Msa0595170:intron 45.0%
TGAAAGCCGATGCAGAACAA+AGG - chr4_2:24033122-24033141 None:intergenic 45.0%
!! TGTTCTGCATCGGCTTTCAA+AGG + chr4_2:24033123-24033142 Msa0595170:intron 45.0%
TGTTGTCTTTGGTATGAGGC+AGG + chr4_2:24033240-24033259 Msa0595170:intron 45.0%
AAAAAGGAAGGAGCGGTCAA+AGG + chr4_2:24033334-24033353 Msa0595170:CDS 45.0%
CAATGTTGTTAACCTGCCTC+AGG + chr4_2:24033391-24033410 Msa0595170:CDS 45.0%
! TGATGATGCAACAGACACCT+AGG + chr4_2:24033600-24033619 Msa0595170:intron 45.0%
TATATGAGGAAGGACAGCCT+AGG - chr4_2:24033620-24033639 None:intergenic 45.0%
TGAGAATCTGTCTCAGAGGA+AGG - chr4_2:24034081-24034100 None:intergenic 45.0%
CCATTTCTGTTGTCACCTTC+AGG - chr4_2:24034153-24034172 None:intergenic 45.0%
CCTGAAGGTGACAACAGAAA+TGG + chr4_2:24034150-24034169 Msa0595170:CDS 45.0%
GGTGACAACAGAAATGGAGA+AGG + chr4_2:24034156-24034175 Msa0595170:CDS 45.0%
ATAGTTGGGGTCCACATAGT+AGG - chr4_2:24034603-24034622 None:intergenic 45.0%
TACTATGTGGACCCCAACTA+TGG + chr4_2:24034602-24034621 Msa0595170:intron 45.0%
ACTATGTGGACCCCAACTAT+GGG + chr4_2:24034603-24034622 Msa0595170:intron 45.0%
GTCATGAGAACCCATAGTTG+GGG - chr4_2:24034616-24034635 None:intergenic 45.0%
GAGTCATGAGAACCCATAGT+TGG - chr4_2:24034618-24034637 None:intergenic 45.0%
! AAAGGGCATACTTATGTGGC+AGG + chr4_2:24034688-24034707 Msa0595170:intron 45.0%
! AAGGGCATACTTATGTGGCA+GGG + chr4_2:24034689-24034708 Msa0595170:intron 45.0%
ATACTTATGTGGCAGGGAGT+GGG + chr4_2:24034695-24034714 Msa0595170:intron 45.0%
GTGTGTTATCTCCAACTCTG+GGG + chr4_2:24034722-24034741 Msa0595170:intron 45.0%
AGTCAGCTATATGAGGACTG+AGG + chr4_2:24034745-24034764 Msa0595170:intron 45.0%
GTCAGCTATATGAGGACTGA+GGG + chr4_2:24034746-24034765 Msa0595170:intron 45.0%
TCAGCTATATGAGGACTGAG+GGG + chr4_2:24034747-24034766 Msa0595170:intron 45.0%
AGGGGAGAGGAAGATTATCT+GGG + chr4_2:24034765-24034784 Msa0595170:intron 45.0%
TCTGTGAGTTGCTGTGATTC+GGG + chr4_2:24034947-24034966 Msa0595170:intron 45.0%
GATGGGGTAACATAGGATGA+AGG - chr4_2:24035740-24035759 None:intergenic 45.0%
GAGTGAGAATAAGTGGCTGA+TGG - chr4_2:24035787-24035806 None:intergenic 45.0%
! ATGCGCTCCCATTTTGTTAC+TGG + chr4_2:24035963-24035982 Msa0595170:intron 45.0%
AGCATGTTAGGGAACAAGAG+AGG - chr4_2:24036335-24036354 None:intergenic 45.0%
!! TTATTTCTGGTGCAGCAGTG+TGG + chr4_2:24036385-24036404 Msa0595170:intron 45.0%
GTACTTTGCTCAACCGATAC+AGG - chr4_2:24036521-24036540 None:intergenic 45.0%
!! ACTGAGATGATGGAAGAGGA+TGG + chr4_2:24036539-24036558 Msa0595170:CDS 45.0%
! CTGGCAAGTTGAAGGAAAAC+GGG + chr4_2:24036808-24036827 Msa0595170:CDS 45.0%
! TGGCAAGTTGAAGGAAAACG+GGG + chr4_2:24036809-24036828 Msa0595170:CDS 45.0%
GCTCCTTTCAAATTTCGCCT+TGG + chr4_2:24036858-24036877 Msa0595170:CDS 45.0%
!! GGTTGGGATATTGGTCTTGA+AGG + chr4_2:24036987-24037006 Msa0595170:CDS 45.0%
! TGCCCCTCGTGATTCATTTT+TGG + chr4_2:24037488-24037507 Msa0595170:three_prime_UTR 45.0%
! CAACGACTCGACATGGTTTT+CGG - chr4_2:24037584-24037603 None:intergenic 45.0%
! CCCGGAGAGTAGAGTTTGTT+TGG - chr4_2:24027922-24027941 None:intergenic 50.0%
!! CCGGGTTTAGGGTTTTTAGG+AGG + chr4_2:24027937-24027956 Msa0595170:CDS 50.0%
TGAAATGTGGAGGCGACCTT+TGG - chr4_2:24028141-24028160 None:intergenic 50.0%
AGGTCGCCTCCACATTTCAA+TGG + chr4_2:24028142-24028161 Msa0595170:CDS 50.0%
! GGAGCAGCCAGAATTGATTC+TGG - chr4_2:24028834-24028853 None:intergenic 50.0%
!! TTTCAGGCCACTTTGGGACA+TGG + chr4_2:24029159-24029178 Msa0595170:intron 50.0%
TGCAAGGACTCAGTTTGTCC+TGG - chr4_2:24029258-24029277 None:intergenic 50.0%
CGCAGAGATGAATACTCCGA+GGG - chr4_2:24029332-24029351 None:intergenic 50.0%
! CCTCGGAGTATTCATCTCTG+CGG + chr4_2:24029330-24029349 Msa0595170:CDS 50.0%
TGCGGTTATTATCTTGCCCG+TGG + chr4_2:24029348-24029367 Msa0595170:CDS 50.0%
TAGTATTGCCATAGCGGCCA+CGG - chr4_2:24029368-24029387 None:intergenic 50.0%
TGGCCGCTATGGCAATACTA+TGG + chr4_2:24029368-24029387 Msa0595170:CDS 50.0%
!! GCAGAGGAAGCATCTTCTGA+TGG + chr4_2:24030337-24030356 Msa0595170:intron 50.0%
!! GAGGAAGCATCTTCTGATGG+CGG + chr4_2:24030340-24030359 Msa0595170:intron 50.0%
!! GCTGAGGAAGAAGTACCAGT+TGG + chr4_2:24030393-24030412 Msa0595170:CDS 50.0%
CATCATCCGACTCTACCAAC+TGG - chr4_2:24030411-24030430 None:intergenic 50.0%
!! GATGATGATAGCGGCCTTGA+AGG + chr4_2:24030424-24030443 Msa0595170:CDS 50.0%
GACAGTTCCTTCCACTGTTC+CGG + chr4_2:24030850-24030869 Msa0595170:CDS 50.0%
CTTCCACTGTTCCGGATGTT+GGG + chr4_2:24030858-24030877 Msa0595170:CDS 50.0%
TTCCACTGTTCCGGATGTTG+GGG + chr4_2:24030859-24030878 Msa0595170:CDS 50.0%
GCCAAAAATGAACACGTCCC+AGG + chr4_2:24030961-24030980 Msa0595170:CDS 50.0%
GTCCCAGGATCACTTTGATC+AGG + chr4_2:24030976-24030995 Msa0595170:CDS 50.0%
GGATCGACCAAGTGATCAGA+AGG - chr4_2:24031252-24031271 None:intergenic 50.0%
GCCAAAAATGAACATGGCCC+AGG + chr4_2:24031395-24031414 Msa0595170:CDS 50.0%
AGCTGAACCTTCAGACCAGT+TGG + chr4_2:24031698-24031717 Msa0595170:CDS 50.0%
CTTCCACTGTTCCGGATGTT+GGG + chr4_2:24030858-24030877 Msa0595170:CDS 50.0%
TTCCACTGTTCCGGATGTTG+GGG + chr4_2:24030859-24030878 Msa0595170:CDS 50.0%
CGCAGCATTATCTAGATCGG+TGG - chr4_2:24031823-24031842 None:intergenic 50.0%
GAACACAGACGAGGATCTTC+TGG + chr4_2:24031860-24031879 Msa0595170:CDS 50.0%
!! ACCACTTGGCTTTTGGCTGT+TGG + chr4_2:24032425-24032444 Msa0595170:intron 50.0%
AGGCAGGAAAGCTGAAACCA+CGG + chr4_2:24033256-24033275 Msa0595170:intron 50.0%
CCTTGACCAACCTGTGAAGA+AGG - chr4_2:24033293-24033312 None:intergenic 50.0%
!! CCTTCTTCACAGGTTGGTCA+AGG + chr4_2:24033290-24033309 Msa0595170:CDS 50.0%
!! TTCACAGGTTGGTCAAGGAC+AGG + chr4_2:24033295-24033314 Msa0595170:CDS 50.0%
TGTGTTCATTTCCCTGAGGC+AGG - chr4_2:24033406-24033425 None:intergenic 50.0%
GGACTCTGCTGTCTCTTTGT+CGG - chr4_2:24034202-24034221 None:intergenic 50.0%
AAAGAGACAGCAGAGTCCGA+TGG + chr4_2:24034204-24034223 Msa0595170:intron 50.0%
CATACTTATGTGGCAGGGAG+TGG + chr4_2:24034694-24034713 Msa0595170:intron 50.0%
TACTTATGTGGCAGGGAGTG+GGG + chr4_2:24034696-24034715 Msa0595170:intron 50.0%
! TATAGCTGACTCCCCAGAGT+TGG - chr4_2:24034736-24034755 None:intergenic 50.0%
TCTGGGGAGTCAGCTATATG+AGG + chr4_2:24034738-24034757 Msa0595170:intron 50.0%
TATATGAGGACTGAGGGGAG+AGG + chr4_2:24034752-24034771 Msa0595170:intron 50.0%
GAGGGGAGAGGAAGATTATC+TGG + chr4_2:24034764-24034783 Msa0595170:intron 50.0%
GGGGAGAGGAAGATTATCTG+GGG + chr4_2:24034766-24034785 Msa0595170:intron 50.0%
GGTGCTCAAGACAATCCTGA+TGG + chr4_2:24036413-24036432 Msa0595170:CDS 50.0%
GGCAGTGAAGTCGTAAACTC+TGG + chr4_2:24036491-24036510 Msa0595170:CDS 50.0%
AAACTCTGGCGTGCCTGTAT+CGG + chr4_2:24036505-24036524 Msa0595170:CDS 50.0%
! CAAGTTGAAGGAAAACGGGG+TGG + chr4_2:24036812-24036831 Msa0595170:CDS 50.0%
TGATTCTCAGGCATGCGAGT+TGG + chr4_2:24037099-24037118 Msa0595170:intron 50.0%
TCCATCCAACTGATTGTGGC+TGG + chr4_2:24037352-24037371 Msa0595170:three_prime_UTR 50.0%
ACCAGCCACAATCAGTTGGA+TGG - chr4_2:24037356-24037375 None:intergenic 50.0%
CATGACCAGCCACAATCAGT+TGG - chr4_2:24037360-24037379 None:intergenic 50.0%
GGGAAATATATGGAGTCCGG+AGG + chr4_2:24037393-24037412 Msa0595170:intron 50.0%
ACAGCTGGGCGATCAAAATC+CGG + chr4_2:24037420-24037439 Msa0595170:three_prime_UTR 50.0%
CGAAAACCATGTCGAGTCGT+TGG + chr4_2:24037582-24037601 Msa0595170:three_prime_UTR 50.0%
CTTTCACCAACGACTCGACA+TGG - chr4_2:24037591-24037610 None:intergenic 50.0%
! CGAGTCGTTGGTGAAAGTCA+TGG + chr4_2:24037594-24037613 Msa0595170:three_prime_UTR 50.0%
! GTCGTTGGTGAAAGTCATGG+TGG + chr4_2:24037597-24037616 Msa0595170:three_prime_UTR 50.0%
TGCAGTGCCATGTCCCAAAG+TGG - chr4_2:24029169-24029188 None:intergenic 55.0%
TTCTTTCCGTCCTTGGCCCT+CGG + chr4_2:24029313-24029332 Msa0595170:CDS 55.0%
AATACTCCGAGGGCCAAGGA+CGG - chr4_2:24029322-24029341 None:intergenic 55.0%
GATGAATACTCCGAGGGCCA+AGG - chr4_2:24029326-24029345 None:intergenic 55.0%
CCGCAGAGATGAATACTCCG+AGG - chr4_2:24029333-24029352 None:intergenic 55.0%
AGTATTGCCATAGCGGCCAC+GGG - chr4_2:24029367-24029386 None:intergenic 55.0%
! GGCGGACGAAAAAGTGCGAA+AGG + chr4_2:24030358-24030377 Msa0595170:CDS 55.0%
GTGCGAAAGGCAGCAGAAGA+CGG + chr4_2:24030371-24030390 Msa0595170:CDS 55.0%
CCAACATCCGGAACAGTGGA+AGG - chr4_2:24030860-24030879 None:intergenic 55.0%
CCTTCCACTGTTCCGGATGT+TGG + chr4_2:24030857-24030876 Msa0595170:CDS 55.0%
ATCCCCAACATCCGGAACAG+TGG - chr4_2:24030864-24030883 None:intergenic 55.0%
ATACGCGCTTGCTTCCCTCT+TGG + chr4_2:24031158-24031177 Msa0595170:intron 55.0%
GGTCGATCCTTGCACTGTTC+CGG + chr4_2:24031263-24031282 Msa0595170:CDS 55.0%
CCAACATCCGGAACAGTGCA+AGG - chr4_2:24031273-24031292 None:intergenic 55.0%
CCTTGCACTGTTCCGGATGT+TGG + chr4_2:24031270-24031289 Msa0595170:CDS 55.0%
GAACATGGCCCAGGATCTCT+TGG + chr4_2:24031404-24031423 Msa0595170:CDS 55.0%
! GGAACTGCCAACTGGTCTGA+AGG - chr4_2:24031708-24031727 None:intergenic 55.0%
CAGTGGAAGGAACTGCCAAC+TGG - chr4_2:24031716-24031735 None:intergenic 55.0%
GGCAGTTCCTTCCACTGTTC+CGG + chr4_2:24031719-24031738 Msa0595170:CDS 55.0%
CCAACATCCGGAACAGTGGA+AGG - chr4_2:24030860-24030879 None:intergenic 55.0%
CCTTCCACTGTTCCGGATGT+TGG + chr4_2:24030857-24030876 Msa0595170:CDS 55.0%
ATCCCCAACATCCGGAACAG+TGG - chr4_2:24030864-24030883 None:intergenic 55.0%
ACAGACGAGGATCTTCTGGC+AGG + chr4_2:24031864-24031883 Msa0595170:CDS 55.0%
GCCAACAGCCAAAAGCCAAG+TGG - chr4_2:24032429-24032448 None:intergenic 55.0%
! TGGTGAGATGGTGGCATGTC+TGG + chr4_2:24032488-24032507 Msa0595170:intron 55.0%
! ATGGTGGCATGTCTGGCTCA+TGG + chr4_2:24032495-24032514 Msa0595170:intron 55.0%
!! GTTTTGTGGGCGTCGTCTCT+CGG + chr4_2:24032639-24032658 Msa0595170:intron 55.0%
ACTTATGTGGCAGGGAGTGG+GGG + chr4_2:24034697-24034716 Msa0595170:intron 55.0%
TGGTGCAGCAGTGTGGACAA+TGG + chr4_2:24036392-24036411 Msa0595170:intron 55.0%
AGTCCGGAGGCAATACAGCT+GGG + chr4_2:24037406-24037425 Msa0595170:intron 55.0%
TATCTTGCCCGTGGCCGCTA+TGG + chr4_2:24029357-24029376 Msa0595170:CDS 60.0%
AAGGCAGCAGAAGACGGCTG+AGG + chr4_2:24030377-24030396 Msa0595170:CDS 60.0%
GGCCCAGGATCTCTTGGATC+AGG + chr4_2:24031410-24031429 Msa0595170:CDS 60.0%
! GTGGCATGTCTGGCTCATGG+TGG + chr4_2:24032498-24032517 Msa0595170:intron 60.0%
! GCATGTCTGGCTCATGGTGG+CGG + chr4_2:24032501-24032520 Msa0595170:intron 60.0%
TCTGTAGGAGCTCGGCTCTG+TGG + chr4_2:24034826-24034845 Msa0595170:intron 60.0%
CTGTAGGAGCTCGGCTCTGT+GGG + chr4_2:24034827-24034846 Msa0595170:intron 60.0%
GAGTCCGGAGGCAATACAGC+TGG + chr4_2:24037405-24037424 Msa0595170:intron 60.0%
TCGCCCAGCTGTATTGCCTC+CGG - chr4_2:24037412-24037431 None:intergenic 60.0%
! GTGGGCGTCGTCTCTCGGAT+TGG + chr4_2:24032644-24032663 Msa0595170:intron 65.0%
AGCTCGGCTCTGTGGGCCTT+AGG + chr4_2:24034834-24034853 Msa0595170:intron 65.0%
Chromosome Type Strat End Strand Name
chr4_2 gene 24027876 24037732 24027876 ID=Msa0595170;Name=Msa0595170
chr4_2 mRNA 24027876 24037732 24027876 ID=Msa0595170-mRNA-1;Parent=Msa0595170;Name=Msa0595170-mRNA-1;_AED=0.14;_eAED=0.14;_QI=0|0.86|0.75|1|0.93|0.87|16|365|877
chr4_2 exon 24027876 24028008 24027876 ID=Msa0595170-mRNA-1:exon:6464;Parent=Msa0595170-mRNA-1
chr4_2 exon 24028090 24028163 24028090 ID=Msa0595170-mRNA-1:exon:6465;Parent=Msa0595170-mRNA-1
chr4_2 exon 24029165 24029397 24029165 ID=Msa0595170-mRNA-1:exon:6466;Parent=Msa0595170-mRNA-1
chr4_2 exon 24030107 24030201 24030107 ID=Msa0595170-mRNA-1:exon:6467;Parent=Msa0595170-mRNA-1
chr4_2 exon 24030341 24030692 24030341 ID=Msa0595170-mRNA-1:exon:6468;Parent=Msa0595170-mRNA-1
chr4_2 exon 24030826 24031125 24030826 ID=Msa0595170-mRNA-1:exon:6469;Parent=Msa0595170-mRNA-1
chr4_2 exon 24031236 24031559 24031236 ID=Msa0595170-mRNA-1:exon:6470;Parent=Msa0595170-mRNA-1
chr4_2 exon 24031695 24031919 24031695 ID=Msa0595170-mRNA-1:exon:6471;Parent=Msa0595170-mRNA-1
chr4_2 exon 24033262 24033447 24033262 ID=Msa0595170-mRNA-1:exon:6472;Parent=Msa0595170-mRNA-1
chr4_2 exon 24034044 24034217 24034044 ID=Msa0595170-mRNA-1:exon:6473;Parent=Msa0595170-mRNA-1
chr4_2 exon 24036400 24036676 24036400 ID=Msa0595170-mRNA-1:exon:6474;Parent=Msa0595170-mRNA-1
chr4_2 exon 24036792 24036879 24036792 ID=Msa0595170-mRNA-1:exon:6475;Parent=Msa0595170-mRNA-1
chr4_2 exon 24036967 24037008 24036967 ID=Msa0595170-mRNA-1:exon:6476;Parent=Msa0595170-mRNA-1
chr4_2 exon 24037109 24037157 24037109 ID=Msa0595170-mRNA-1:exon:6477;Parent=Msa0595170-mRNA-1
chr4_2 exon 24037266 24037394 24037266 ID=Msa0595170-mRNA-1:exon:6478;Parent=Msa0595170-mRNA-1
chr4_2 exon 24037415 24037732 24037415 ID=Msa0595170-mRNA-1:exon:6479;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24027876 24028008 24027876 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24028090 24028163 24028090 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24029165 24029397 24029165 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24030107 24030201 24030107 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24030341 24030692 24030341 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24030826 24031125 24030826 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24031236 24031559 24031236 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24031695 24031919 24031695 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24033262 24033447 24033262 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24034044 24034217 24034044 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24036400 24036676 24036400 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24036792 24036879 24036792 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24036967 24037008 24036967 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24037109 24037157 24037109 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 CDS 24037266 24037347 24037266 ID=Msa0595170-mRNA-1:cds;Parent=Msa0595170-mRNA-1
chr4_2 three_prime_UTR 24037348 24037394 24037348 ID=Msa0595170-mRNA-1:three_prime_utr;Parent=Msa0595170-mRNA-1
chr4_2 three_prime_UTR 24037415 24037732 24037415 ID=Msa0595170-mRNA-1:three_prime_utr;Parent=Msa0595170-mRNA-1
Gene Sequence

>Msa0595170

ATGGAAATTAAAAAGGCACAAGTAGCAGTATTTAACAAACGCGCCAAACAAACTCTACTCTCCGGGTTTAGGGTTTTTAGGAGGAACGCAGAGAAGCGAAACAACTCTTCCTCTGAAACAATGGCTTTTTGGGGTGTTGAAATCAAACCTGGAAAACCTTTCACTCACTCTTATGATTCTTCCAAAGGTCGCCTCCACATTTCAATGGCCACTTTGGGACATGGCACTGCAATTACAAAAAGCACTCTGCAATGTAATGTGGGAAACAGAAGTCCTGTTTATCTGTGCTCTCTTTATCCAGGACAAACTGAGTCCTTGCAATTGAATTTGGAGCTTGAGGAAGATGGTAATGTTATTCTTTCCGTCCTTGGCCCTCGGAGTATTCATCTCTGCGGTTATTATCTTGCCCGTGGCCGCTATGGCAATACTATGGATGATTCGGAATCATATGGAGAAGATATAGCCAATACAGAAACAGAGAAATCTGATCGCAGTGATGAAGATGACTACGATGATAGTTTTATTAACGATGACGAGGAAGCATCTTCTGATGGCGGACGAAAAAGTGCGAAAGGCAGCAGAAGACGGCTGAGGAAGAAGTACCAGTTGGTAGAGTCGGATGATGATAGCGGCCTTGAAGGAAAGAAAACTGTCAATGACAGTGTGCATGTACAATCTCAGGAAATTGATGATGAAGATAGTCTACCAATTTCTTCTCTTTGCAAGAAGAATAAATCCTTTGTAAGGGTATTGGATCAGGAAATGGAAGATTGTTTTGACAAAGAAGCAATTGATGCTGGCGAAAAAGACAGTGACAACCATGAGAACAGTATTATTGAAACAAAACTGAAAACTGACAATGCTGTCACTGAGAGTCAGATTCATAGGGAAGCTGAACCTTCAGATCAGTTGACAGTTCCTTCCACTGTTCCGGATGTTGGGGATAATAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCTCCACTGAACTAGATAATGCTGCACAAGATGAGCCAAAAATGAACACGTCCCAGGATCACTTTGATCAGGAAATGCATGATAATATTGACAGAGAAACAGTTGATGCTGGCAAAAAAGACGGTGAAGACCATGAGAATAGTGCTACTGAAACAAAATTGGAAACTGACAATGCTGTTGCAGATAGTCAGACTCACAGCAAGGAAGCTGAACCTTCTGATCACTTGGTCGATCCTTGCACTGTTCCGGATGTTGGAGATATTAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGTTCTAGTAATGGCGATTCCACCGAACTAGATAATGCTGCACAAGATGAGCCAAAAATGAACATGGCCCAGGATCTCTTGGATCAGGAAATGGTTGATAATGTTGACAAAGAAGCAGTTGATGATGGCAAAAAAGACGGTGAAGACTGTGAGAATATTACTATTGAAACAAAATTGAAAACTGACAATGTTGTCGCAGATATTCAAACTCATAGGGAAGCTGAACCTTCAGACCAGTTGGCAGTTCCTTCCACTGTTCCGGATGTTGGGGATATGAAAAAGTCAAAAAAGAAAAAGAAGGGAAAGGAAAAAGAAACCAAGAGCTCTAGTAATGAACATTCCACCGATCTAGATAATGCTGCGCAAGATGAGCCAAAAATGAACACAGACGAGGATCTTCTGGCAGGAAATGAACAGCACCAGCAGCAACCTAATGATAAGAAAGCTGAAACCACGGATAAAATACTACCTTCTTCACAGGTTGGTCAAGGACAGGATGAAAAACCAAAGAAAAAAAGGAAGGAGCGGTCAAAGGTGACACTTTTTATTGCTGATGATGCTTGTATTAGCAATGTTGTTAACCTGCCTCAGGGAAATGAACACAGTAATCAGGACACAGTTAATGGAAGGGATGTTAAGATTGCAGACAGTGTTGCATTGCCTTCCTCTGAGACAGATTCTCAAAAGAAAACAAAGAGGAGAAAGAAAGAACAAATAAACAAAGCTTCATATCCTGAAGGTGACAACAGAAATGGAGAAGGTATCATTCAAGATTACAAAGCCGACAAAGAGACAGCAGACAGTGTGGACAATGGTGCTCAAGACAATCCTGATGGAAATCAATCCGAAGATAAGAAAGTTAAGAAAAAGAAGAAGAAAGGTAAAAGTCAGGGCAGTGAAGTCGTAAACTCTGGCGTGCCTGTATCGGTTGAGCAAAGTACTGAGATGATGGAAGAGGATGGAAAAAATGTGGAGGATACAAAGCCTTCCCAAGTTAGAACATTGTCAAATGGACTAGTTATTCAAGAGCTTGAGACAGGGAAAGAAAATGGGAAAATTGCTACAGTAGGGAAAAAGATCAGCATCAATTACACTGGCAAGTTGAAGGAAAACGGGGTGGTGATTGAATCAAATGCTGGCGAAGCTCCTTTCAAATTTCGCCTTGGTAAAGGAGAAGTTATTGAGGGTTGGGATATTGGTCTTGAAGGCATGCGAGTTGGAGAAAAGAGAAGACTTGTTGTTCCACCATCAATGACGTCTAAGAAGGATGGTGAAAGTGAAAACATACCACCAAATTCATGGTTGGTTTATGACTTTGAACTGGTTAAAGTTCATTGA
Protein sequence

>Msa0595170

MEIKKAQVAVFNKRAKQTLLSGFRVFRRNAEKRNNSSSETMAFWGVEIKPGKPFTHSYDSSKGRLHISMATLGHGTAITKSTLQCNVGNRSPVYLCSLYPGQTESLQLNLELEEDGNVILSVLGPRSIHLCGYYLARGRYGNTMDDSESYGEDIANTETEKSDRSDEDDYDDSFINDDEEASSDGGRKSAKGSRRRLRKKYQLVESDDDSGLEGKKTVNDSVHVQSQEIDDEDSLPISSLCKKNKSFVRVLDQEMEDCFDKEAIDAGEKDSDNHENSIIETKLKTDNAVTESQIHREAEPSDQLTVPSTVPDVGDNKKSKKKKKGKEKETSTELDNAAQDEPKMNTSQDHFDQEMHDNIDRETVDAGKKDGEDHENSATETKLETDNAVADSQTHSKEAEPSDHLVDPCTVPDVGDIKKSKKKKKGKEKETKSSSNGDSTELDNAAQDEPKMNMAQDLLDQEMVDNVDKEAVDDGKKDGEDCENITIETKLKTDNVVADIQTHREAEPSDQLAVPSTVPDVGDMKKSKKKKKGKEKETKSSSNEHSTDLDNAAQDEPKMNTDEDLLAGNEQHQQQPNDKKAETTDKILPSSQVGQGQDEKPKKKRKERSKVTLFIADDACISNVVNLPQGNEHSNQDTVNGRDVKIADSVALPSSETDSQKKTKRRKKEQINKASYPEGDNRNGEGIIQDYKADKETADSVDNGAQDNPDGNQSEDKKVKKKKKKGKSQGSEVVNSGVPVSVEQSTEMMEEDGKNVEDTKPSQVRTLSNGLVIQELETGKENGKIATVGKKISINYTGKLKENGVVIESNAGEAPFKFRLGKGEVIEGWDIGLEGMRVGEKRRLVVPPSMTSKKDGESENIPPNSWLVYDFELVKVH*