Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984310 | XP_013457509.1 | 99.576 | 472 | 2 | 0 | 1 | 472 | 1 | 472 | 0.0 | 983 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984310 | sp|Q00257|1A12_CUCMA | 75.625 | 480 | 103 | 4 | 1 | 472 | 1 | 474 | 0.0 | 764 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984310 | A0A072V097 | 99.576 | 472 | 2 | 0 | 1 | 472 | 1 | 472 | 0.0 | 983 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0984310 | Msa1205330 | 0.852094 | 5.783670e-61 | -8.615850e-47 |
| Msa0984310 | Msa1297260 | 0.900080 | 1.047638e-77 | -8.615850e-47 |
| Msa0483820 | Msa0984310 | 0.914844 | 1.189152e-84 | -8.615850e-47 |
| Msa0893490 | Msa0984310 | 0.811636 | 6.339324e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984310 | MtrunA17_Chr4g0054371 | 99.576 | 472 | 2 | 0 | 1 | 472 | 1 | 472 | 0.0 | 983 |
| Msa0984310 | MtrunA17_Chr5g0400831 | 83.402 | 482 | 67 | 5 | 1 | 471 | 1 | 480 | 0.0 | 835 |
| Msa0984310 | MtrunA17_Chr3g0135251 | 70.139 | 432 | 122 | 3 | 3 | 433 | 1 | 426 | 0.0 | 657 |
| Msa0984310 | MtrunA17_Chr6g0488041 | 60.325 | 431 | 161 | 4 | 4 | 434 | 14 | 434 | 0.0 | 554 |
| Msa0984310 | MtrunA17_Chr8g0387481 | 55.876 | 451 | 187 | 4 | 2 | 450 | 10 | 450 | 0.0 | 552 |
| Msa0984310 | MtrunA17_Chr8g0389311 | 58.352 | 437 | 164 | 5 | 4 | 439 | 12 | 431 | 0.0 | 536 |
| Msa0984310 | MtrunA17_Chr8g0389321 | 58.352 | 437 | 164 | 5 | 4 | 439 | 12 | 431 | 0.0 | 536 |
| Msa0984310 | MtrunA17_Chr8g0348351 | 53.759 | 439 | 189 | 3 | 2 | 438 | 9 | 435 | 0.0 | 520 |
| Msa0984310 | MtrunA17_Chr7g0248681 | 53.103 | 435 | 191 | 3 | 2 | 434 | 9 | 432 | 4.35e-178 | 508 |
| Msa0984310 | MtrunA17_Chr6g0475681 | 45.517 | 435 | 225 | 5 | 4 | 437 | 104 | 527 | 1.39e-146 | 429 |
| Msa0984310 | MtrunA17_Chr5g0398431 | 41.687 | 415 | 232 | 3 | 16 | 430 | 84 | 488 | 8.74e-126 | 375 |
| Msa0984310 | MtrunA17_Chr5g0412871 | 26.966 | 178 | 122 | 6 | 79 | 253 | 100 | 272 | 1.81e-14 | 75.5 |
| Msa0984310 | MtrunA17_Chr8g0345201 | 22.449 | 343 | 235 | 13 | 112 | 433 | 182 | 514 | 3.37e-13 | 71.6 |
| Msa0984310 | MtrunA17_Chr4g0004131 | 22.802 | 364 | 228 | 14 | 79 | 431 | 61 | 382 | 5.59e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0984310 | AT4G37770.1 | 71.519 | 474 | 125 | 3 | 1 | 470 | 1 | 468 | 0.0 | 715 |
| Msa0984310 | AT3G49700.1 | 74.153 | 472 | 109 | 4 | 1 | 466 | 1 | 465 | 0.0 | 711 |
| Msa0984310 | AT5G65800.1 | 73.517 | 472 | 112 | 5 | 1 | 466 | 1 | 465 | 0.0 | 704 |
| Msa0984310 | AT2G22810.1 | 68.828 | 478 | 136 | 2 | 1 | 470 | 1 | 473 | 0.0 | 691 |
| Msa0984310 | AT4G08040.1 | 66.450 | 462 | 145 | 3 | 3 | 463 | 1 | 453 | 0.0 | 650 |
| Msa0984310 | AT4G26200.1 | 58.333 | 432 | 171 | 3 | 4 | 434 | 18 | 441 | 0.0 | 534 |
| Msa0984310 | AT3G61510.1 | 54.147 | 434 | 187 | 3 | 2 | 435 | 9 | 430 | 0.0 | 520 |
| Msa0984310 | AT1G01480.1 | 51.380 | 471 | 213 | 4 | 3 | 464 | 11 | 474 | 1.42e-179 | 512 |
| Msa0984310 | AT4G11280.1 | 53.118 | 433 | 194 | 2 | 1 | 433 | 12 | 435 | 7.93e-177 | 505 |
| Msa0984310 | AT1G01480.2 | 51.467 | 375 | 166 | 4 | 99 | 464 | 1 | 368 | 2.54e-140 | 408 |
| Msa0984310 | AT5G51690.1 | 43.590 | 429 | 231 | 4 | 4 | 431 | 69 | 487 | 4.14e-139 | 409 |
| Msa0984310 | AT1G62960.1 | 42.227 | 431 | 231 | 8 | 4 | 431 | 132 | 547 | 4.42e-126 | 378 |
| Msa0984310 | AT5G51690.2 | 42.932 | 382 | 200 | 4 | 50 | 431 | 1 | 364 | 9.73e-121 | 358 |
| Msa0984310 | AT1G23310.2 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 6.52e-15 | 77.0 |
| Msa0984310 | AT1G23310.1 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 1.20e-14 | 76.6 |
| Msa0984310 | AT1G70580.4 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.24e-14 | 75.1 |
| Msa0984310 | AT1G70580.2 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.24e-14 | 75.1 |
| Msa0984310 | AT1G70580.3 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.24e-14 | 75.1 |
| Msa0984310 | AT1G70580.1 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.24e-14 | 75.1 |
| Msa0984310 | AT2G22250.1 | 22.222 | 270 | 182 | 7 | 105 | 369 | 106 | 352 | 4.28e-13 | 71.2 |
| Msa0984310 | AT2G22250.3 | 22.222 | 270 | 182 | 7 | 105 | 369 | 153 | 399 | 5.67e-13 | 71.2 |
| Msa0984310 | AT2G22250.2 | 22.222 | 270 | 182 | 7 | 105 | 369 | 153 | 399 | 5.67e-13 | 71.2 |
| Msa0984310 | AT1G77670.1 | 24.267 | 375 | 237 | 16 | 71 | 431 | 92 | 433 | 1.10e-12 | 70.1 |
| Msa0984310 | AT2G24850.1 | 23.724 | 333 | 211 | 12 | 114 | 433 | 117 | 419 | 1.09e-11 | 67.0 |
| Msa0984310 | AT2G20610.1 | 23.333 | 360 | 227 | 14 | 88 | 433 | 111 | 435 | 2.88e-11 | 65.9 |
Find 91 sgRNAs with CRISPR-Local
Find 218 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTACTCCTTTGACTTTA+AGG | 0.007055 | 6_4:+28373613 | None:intergenic |
| TCCATGACGCTGATGAAATT+TGG | 0.143831 | 6_4:+28373456 | None:intergenic |
| CGTCAGAACAAGCTTGTTTC+GGG | 0.214801 | 6_4:-28373156 | Msa0984310:CDS |
| ACAAATATTATCAGCGTCTT+TGG | 0.227556 | 6_4:+28373401 | None:intergenic |
| CAAGACTCTTCATACTTCTT+AGG | 0.254225 | 6_4:-28374353 | Msa0984310:CDS |
| GAGAGCAAGTTCACGGAATA+TGG | 0.287004 | 6_4:+28374065 | None:intergenic |
| GTTACTTACCCTGGATAATA+AGG | 0.296953 | 6_4:+28373859 | None:intergenic |
| ACCTGGCAAACCCAAGTCTT+TGG | 0.309354 | 6_4:+28373350 | None:intergenic |
| CAACACATTTGAAGCTGAAA+TGG | 0.312708 | 6_4:-28373052 | Msa0984310:CDS |
| ACGTCAGAACAAGCTTGTTT+CGG | 0.332943 | 6_4:-28373157 | Msa0984310:CDS |
| ACAAGCATTGGTAGATTTCA+TGG | 0.337094 | 6_4:-28374010 | Msa0984310:CDS |
| GCTTTCCAAGCAGCTAATTC+CGG | 0.349870 | 6_4:+28373122 | None:intergenic |
| CCCATTTGAATAATTCCTTT+AGG | 0.350296 | 6_4:+28374287 | None:intergenic |
| TTCGGTTACTTGAAAGTTGT+TGG | 0.352316 | 6_4:+28373677 | None:intergenic |
| CTTCCTACTCCTTATTATCC+AGG | 0.362035 | 6_4:-28373868 | Msa0984310:CDS |
| GAGTCCACTGGCAATGTTAA+TGG | 0.369447 | 6_4:-28372874 | Msa0984310:CDS |
| GAGGAATGCTTCTCCTTTCT+CGG | 0.379843 | 6_4:+28373891 | None:intergenic |
| TCCTAAAGGAATTATTCAAA+TGG | 0.384178 | 6_4:-28374288 | Msa0984310:CDS |
| TCCAAAGACTTGGGTTTGCC+AGG | 0.387995 | 6_4:-28373351 | Msa0984310:CDS |
| TTGGAGCTTGTGCAATGTAT+TGG | 0.402052 | 6_4:+28373696 | None:intergenic |
| GTGGTGCCTAGCGGGTTTGA+TGG | 0.413274 | 6_4:+28373582 | None:intergenic |
| TTGAAGCTGAAATGGAACTA+TGG | 0.421415 | 6_4:-28373044 | Msa0984310:CDS |
| CATTTCAGCTTCAAATGTGT+TGG | 0.425676 | 6_4:+28373053 | None:intergenic |
| GATTTCATGGCTGAAATTAG+AGG | 0.438990 | 6_4:-28373997 | Msa0984310:CDS |
| CTATAGTCTTTCCAAAGACT+TGG | 0.439881 | 6_4:-28373361 | Msa0984310:CDS |
| AGAGATCTTAAGTGGAGAAC+TGG | 0.441917 | 6_4:-28373732 | Msa0984310:CDS |
| TGCTTGTTGCAATGCTTGTT+CGG | 0.447826 | 6_4:+28373659 | None:intergenic |
| GCTAAGAATCCAGATGCATC+TGG | 0.449521 | 6_4:-28374108 | Msa0984310:CDS |
| TTGACATTGTGGTGCCTAGC+GGG | 0.450378 | 6_4:+28373574 | None:intergenic |
| GATTTGATAGAGATCTTAAG+TGG | 0.457172 | 6_4:-28373740 | Msa0984310:CDS |
| AGCTGCTTGGAAAGCAATGC+AGG | 0.457790 | 6_4:-28373114 | Msa0984310:CDS |
| TACCTTCTTTCCGCCATGCT+TGG | 0.457804 | 6_4:-28373234 | Msa0984310:CDS |
| ACCAATGCTTGTTTGAATGC+TGG | 0.468828 | 6_4:+28374021 | None:intergenic |
| GGATTGTGAACATTATCGTA+TGG | 0.469336 | 6_4:+28374308 | None:intergenic |
| GGTTTGCCAGGTTTCCGTGT+TGG | 0.478336 | 6_4:-28373339 | Msa0984310:CDS |
| CTTTGAAACTAGCAATGAAA+AGG | 0.480723 | 6_4:-28372915 | Msa0984310:CDS |
| GCCGAAGCTTGACATCTTCG+TGG | 0.488316 | 6_4:+28373278 | None:intergenic |
| GAGAAATTTACTCACTAAGT+GGG | 0.491942 | 6_4:-28372830 | Msa0984310:CDS |
| CCTAAAGGAATTATTCAAAT+GGG | 0.495148 | 6_4:-28374287 | Msa0984310:CDS |
| CTAAGAAGTATGAAGAGTCT+TGG | 0.495354 | 6_4:+28374354 | None:intergenic |
| GCTTTCGTTGTTGAGTCCAC+TGG | 0.495466 | 6_4:-28372886 | Msa0984310:CDS |
| ACTCTTCATACTTCTTAGGA+TGG | 0.496264 | 6_4:-28374349 | Msa0984310:CDS |
| AGAGAAATTTACTCACTAAG+TGG | 0.501044 | 6_4:-28372831 | Msa0984310:CDS |
| CACCAAGCATGGCGGAAAGA+AGG | 0.506326 | 6_4:+28373232 | None:intergenic |
| CCTTAAAGTCAAAGGAGTAA+TGG | 0.507013 | 6_4:-28373613 | Msa0984310:CDS |
| GATAATGTTCACAATCCTAA+AGG | 0.507661 | 6_4:-28374302 | Msa0984310:CDS |
| TCCAAATTTCATCAGCGTCA+TGG | 0.509292 | 6_4:-28373457 | Msa0984310:CDS |
| GATTGTGAACATTATCGTAT+GGG | 0.512439 | 6_4:+28374309 | None:intergenic |
| CTGGCATGCCATGGTAGTCT+TGG | 0.514145 | 6_4:+28374040 | None:intergenic |
| TGGTGCCTAGCGGGTTTGAT+GGG | 0.518811 | 6_4:+28373583 | None:intergenic |
| TAATTCACTCCTTGACATTG+TGG | 0.520906 | 6_4:+28373563 | None:intergenic |
| GCATCTGGATTCAAAAGAGA+TGG | 0.523681 | 6_4:-28374093 | Msa0984310:CDS |
| TATAGTCTTTCCAAAGACTT+GGG | 0.530946 | 6_4:-28373360 | Msa0984310:CDS |
| CTCTTCATACTTCTTAGGAT+GGG | 0.532693 | 6_4:-28374348 | Msa0984310:CDS |
| TTCCTACTCCTTATTATCCA+GGG | 0.533548 | 6_4:-28373867 | Msa0984310:intron |
| GCCAGCATTCAAACAAGCAT+TGG | 0.538139 | 6_4:-28374022 | Msa0984310:CDS |
| GCCACGAAGATGTCAAGCTT+CGG | 0.543189 | 6_4:-28373279 | Msa0984310:CDS |
| ATGGCGCCAACACGGAAACC+TGG | 0.544960 | 6_4:+28373333 | None:intergenic |
| CGGAGTAGATGGCGCCAACA+CGG | 0.550123 | 6_4:+28373325 | None:intergenic |
| CTTGGAAGAGAGCAAGTTCA+CGG | 0.552418 | 6_4:+28374058 | None:intergenic |
| GTTTGAATGCTGGCATGCCA+TGG | 0.557856 | 6_4:+28374031 | None:intergenic |
| TCTTGTCATTGTACAGAACC+AGG | 0.559141 | 6_4:-28372976 | Msa0984310:CDS |
| AAAAGCCGGAATTAGCTGCT+TGG | 0.561044 | 6_4:-28373127 | Msa0984310:CDS |
| GCGGTGAGAACTATGTGGTT+GGG | 0.564851 | 6_4:+28373955 | None:intergenic |
| GTGAAATGTTTAAACCAACT+TGG | 0.565975 | 6_4:+28373007 | None:intergenic |
| AAGAAAATAGTGTACCAAGT+TGG | 0.566563 | 6_4:-28373021 | Msa0984310:CDS |
| AAAGCAACTTGTAATAGTCA+TGG | 0.582182 | 6_4:-28374377 | Msa0984310:CDS |
| AAACGCAACCTTAAAGTCAA+AGG | 0.585930 | 6_4:-28373621 | Msa0984310:CDS |
| TGCGGTGAGAACTATGTGGT+TGG | 0.600293 | 6_4:+28373954 | None:intergenic |
| AAACACACACGAAACCAACC+TGG | 0.602737 | 6_4:+28372958 | None:intergenic |
| CATCTACTCCGAAAATGATA+CGG | 0.603585 | 6_4:-28373313 | Msa0984310:CDS |
| GTCATTGTACAGAACCAGGT+TGG | 0.607425 | 6_4:-28372972 | Msa0984310:CDS |
| AACCACATAGTTCTCACCGC+AGG | 0.611056 | 6_4:-28373952 | Msa0984310:CDS |
| CTGGATAATAAGGAGTAGGA+AGG | 0.613137 | 6_4:+28373869 | None:intergenic |
| GATAATAAGGAGTAGGAAGG+AGG | 0.616132 | 6_4:+28373872 | None:intergenic |
| ATAAGCGACGAGATTTACTC+CGG | 0.625337 | 6_4:-28373495 | Msa0984310:CDS |
| TGATCAACGTGATCAACAAG+AGG | 0.629251 | 6_4:-28372788 | Msa0984310:CDS |
| GTTGGTTTAAACATTTCACC+TGG | 0.630672 | 6_4:-28373003 | Msa0984310:CDS |
| AACGTGATCAACAAGAGGAA+CGG | 0.630998 | 6_4:-28372783 | None:intergenic |
| TACCCTGGATAATAAGGAGT+AGG | 0.632955 | 6_4:+28373865 | None:intergenic |
| CGCTAGGCACCACAATGTCA+AGG | 0.634181 | 6_4:-28373572 | Msa0984310:CDS |
| AACACCATTAACATTGCCAG+TGG | 0.635347 | 6_4:+28372870 | None:intergenic |
| CTTGACATTGTGGTGCCTAG+CGG | 0.638500 | 6_4:+28373573 | None:intergenic |
| GACGCTGATGAAATTTGGAG+AGG | 0.641265 | 6_4:+28373461 | None:intergenic |
| ACAAACCCATCAAACCCGCT+AGG | 0.648673 | 6_4:-28373588 | Msa0984310:CDS |
| GTGTTTCGCAAACATGTCAG+AGG | 0.667703 | 6_4:-28372941 | Msa0984310:CDS |
| GCTCTCTTCCAAGACTACCA+TGG | 0.688190 | 6_4:-28374048 | Msa0984310:CDS |
| ATTTGCTGAAGTAGAACCTG+CGG | 0.695572 | 6_4:+28373936 | None:intergenic |
| GTACAATGACAAGATGAACC+AGG | 0.699733 | 6_4:+28372985 | None:intergenic |
| ATTGCAACAAGCATACCAAG+AGG | 0.713636 | 6_4:-28373649 | Msa0984310:CDS |
| AACCTGCGGTGAGAACTATG+TGG | 0.788440 | 6_4:+28373950 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGTACAAATAAATTTTTA+AGG | + | chr6_4:28372993-28373012 | None:intergenic | 10.0% |
| !!! | TAAGTACAAATAAATTTTTA+AGG | + | chr6_4:28372993-28373012 | None:intergenic | 10.0% |
| !! | GCAAAAGAAAAAAAAAATAT+TGG | + | chr6_4:28373021-28373040 | None:intergenic | 15.0% |
| !! | GCAAAAGAAAAAAAAAATAT+TGG | + | chr6_4:28373021-28373040 | None:intergenic | 15.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | - | chr6_4:28372893-28372912 | Msa0984310:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | - | chr6_4:28372894-28372913 | Msa0984310:CDS | 25.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | - | chr6_4:28372893-28372912 | Msa0984310:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | - | chr6_4:28372894-28372913 | Msa0984310:CDS | 25.0% |
| AAAGCAACTTGTAATAGTCA+TGG | - | chr6_4:28372804-28372823 | Msa0984310:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | + | chr6_4:28372875-28372894 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | - | chr6_4:28372879-28372898 | Msa0984310:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | + | chr6_4:28372897-28372916 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | + | chr6_4:28373334-28373353 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | - | chr6_4:28373441-28373460 | Msa0984310:CDS | 30.0% | |
| ACAAATATTATCAGCGTCTT+TGG | + | chr6_4:28373783-28373802 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | - | chr6_4:28373821-28373840 | Msa0984310:intron | 30.0% | |
| ! | GTTTTCAGCTAAGTAGTTTT+TGG | + | chr6_4:28373987-28374006 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | - | chr6_4:28374081-28374100 | Msa0984310:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | - | chr6_4:28374092-28374111 | Msa0984310:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | - | chr6_4:28374160-28374179 | Msa0984310:intron | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | + | chr6_4:28374177-28374196 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | - | chr6_4:28374266-28374285 | Msa0984310:intron | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | - | chr6_4:28374350-28374369 | Msa0984310:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | - | chr6_4:28374351-28374370 | Msa0984310:CDS | 30.0% | |
| AAAGCAACTTGTAATAGTCA+TGG | - | chr6_4:28372804-28372823 | Msa0984310:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | + | chr6_4:28372875-28372894 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | - | chr6_4:28372879-28372898 | Msa0984310:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | + | chr6_4:28372897-28372916 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | + | chr6_4:28373334-28373353 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | - | chr6_4:28373441-28373460 | Msa0984310:CDS | 30.0% | |
| ACAAATATTATCAGCGTCTT+TGG | + | chr6_4:28373783-28373802 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | - | chr6_4:28373821-28373840 | Msa0984310:intron | 30.0% | |
| ! | GTTTTCAGCTAAGTAGTTTT+TGG | + | chr6_4:28373987-28374006 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | - | chr6_4:28374081-28374100 | Msa0984310:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | - | chr6_4:28374092-28374111 | Msa0984310:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | - | chr6_4:28374160-28374179 | Msa0984310:intron | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | + | chr6_4:28374177-28374196 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | - | chr6_4:28374266-28374285 | Msa0984310:intron | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | - | chr6_4:28374350-28374369 | Msa0984310:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | - | chr6_4:28374351-28374370 | Msa0984310:CDS | 30.0% | |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | + | chr6_4:28372830-28372849 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | - | chr6_4:28372828-28372847 | Msa0984310:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | - | chr6_4:28372832-28372851 | Msa0984310:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | - | chr6_4:28372833-28372852 | Msa0984310:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | + | chr6_4:28372876-28372895 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | - | chr6_4:28373047-28373066 | Msa0984310:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | - | chr6_4:28373171-28373190 | Msa0984310:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | - | chr6_4:28373184-28373203 | Msa0984310:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | - | chr6_4:28373314-28373333 | Msa0984310:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | + | chr6_4:28373325-28373344 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | + | chr6_4:28373507-28373526 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | - | chr6_4:28373560-28373579 | Msa0984310:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | + | chr6_4:28373571-28373590 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | - | chr6_4:28373568-28373587 | Msa0984310:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | + | chr6_4:28373621-28373640 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | - | chr6_4:28373820-28373839 | Msa0984310:intron | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | - | chr6_4:28373868-28373887 | Msa0984310:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | + | chr6_4:28373879-28373898 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | + | chr6_4:28373963-28373982 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | - | chr6_4:28374080-28374099 | Msa0984310:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | + | chr6_4:28374131-28374150 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | - | chr6_4:28374129-28374148 | Msa0984310:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | - | chr6_4:28374137-28374156 | Msa0984310:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | - | chr6_4:28374178-28374197 | Msa0984310:intron | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | - | chr6_4:28374359-28374378 | Msa0984310:CDS | 35.0% |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | + | chr6_4:28372830-28372849 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | - | chr6_4:28372828-28372847 | Msa0984310:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | - | chr6_4:28372832-28372851 | Msa0984310:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | - | chr6_4:28372833-28372852 | Msa0984310:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | + | chr6_4:28372876-28372895 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | - | chr6_4:28373047-28373066 | Msa0984310:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | - | chr6_4:28373171-28373190 | Msa0984310:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | - | chr6_4:28373184-28373203 | Msa0984310:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | - | chr6_4:28373314-28373333 | Msa0984310:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | + | chr6_4:28373325-28373344 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | + | chr6_4:28373507-28373526 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | - | chr6_4:28373560-28373579 | Msa0984310:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | + | chr6_4:28373571-28373590 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | - | chr6_4:28373568-28373587 | Msa0984310:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | + | chr6_4:28373621-28373640 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | - | chr6_4:28373820-28373839 | Msa0984310:intron | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | - | chr6_4:28373868-28373887 | Msa0984310:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | + | chr6_4:28373879-28373898 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | + | chr6_4:28373963-28373982 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | - | chr6_4:28374080-28374099 | Msa0984310:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | + | chr6_4:28374131-28374150 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | - | chr6_4:28374129-28374148 | Msa0984310:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | - | chr6_4:28374137-28374156 | Msa0984310:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | - | chr6_4:28374178-28374197 | Msa0984310:intron | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | - | chr6_4:28374359-28374378 | Msa0984310:CDS | 35.0% |
| ! | CTTTTGAATCCAGATGCATC+TGG | + | chr6_4:28373085-28373104 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | - | chr6_4:28373088-28373107 | Msa0984310:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+TGG | + | chr6_4:28373163-28373182 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | + | chr6_4:28373248-28373267 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | - | chr6_4:28373277-28373296 | Msa0984310:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | + | chr6_4:28373312-28373331 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | + | chr6_4:28373315-28373334 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | - | chr6_4:28373313-28373332 | Msa0984310:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | + | chr6_4:28373319-28373338 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | - | chr6_4:28373449-28373468 | Msa0984310:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | + | chr6_4:28373488-28373507 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | + | chr6_4:28373525-28373544 | None:intergenic | 40.0% |
| ATTGCAACAAGCATACCAAG+AGG | - | chr6_4:28373532-28373551 | Msa0984310:CDS | 40.0% | |
| ATAAGCGACGAGATTTACTC+CGG | - | chr6_4:28373686-28373705 | Msa0984310:CDS | 40.0% | |
| TCCAAATTTCATCAGCGTCA+TGG | - | chr6_4:28373724-28373743 | Msa0984310:CDS | 40.0% | |
| TCCATGACGCTGATGAAATT+TGG | + | chr6_4:28373728-28373747 | None:intergenic | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | + | chr6_4:28373870-28373889 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | + | chr6_4:28373960-28373979 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | - | chr6_4:28374024-28374043 | Msa0984310:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | - | chr6_4:28374040-28374059 | Msa0984310:CDS | 40.0% |
| GTACAATGACAAGATGAACC+AGG | + | chr6_4:28374199-28374218 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | - | chr6_4:28374205-28374224 | Msa0984310:intron | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | + | chr6_4:28374314-28374333 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | - | chr6_4:28374393-28374412 | Msa0984310:CDS | 40.0% | |
| ! | CTTTTGAATCCAGATGCATC+TGG | + | chr6_4:28373085-28373104 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | - | chr6_4:28373088-28373107 | Msa0984310:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+TGG | + | chr6_4:28373163-28373182 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | + | chr6_4:28373248-28373267 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | - | chr6_4:28373277-28373296 | Msa0984310:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | + | chr6_4:28373312-28373331 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | + | chr6_4:28373315-28373334 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | - | chr6_4:28373313-28373332 | Msa0984310:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | + | chr6_4:28373319-28373338 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | - | chr6_4:28373449-28373468 | Msa0984310:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | + | chr6_4:28373488-28373507 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | + | chr6_4:28373525-28373544 | None:intergenic | 40.0% |
| ATTGCAACAAGCATACCAAG+AGG | - | chr6_4:28373532-28373551 | Msa0984310:CDS | 40.0% | |
| ATAAGCGACGAGATTTACTC+CGG | - | chr6_4:28373686-28373705 | Msa0984310:CDS | 40.0% | |
| TCCAAATTTCATCAGCGTCA+TGG | - | chr6_4:28373724-28373743 | Msa0984310:CDS | 40.0% | |
| TCCATGACGCTGATGAAATT+TGG | + | chr6_4:28373728-28373747 | None:intergenic | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | + | chr6_4:28373870-28373889 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | + | chr6_4:28373960-28373979 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | - | chr6_4:28374024-28374043 | Msa0984310:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | - | chr6_4:28374040-28374059 | Msa0984310:CDS | 40.0% |
| GTACAATGACAAGATGAACC+AGG | + | chr6_4:28374199-28374218 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | - | chr6_4:28374205-28374224 | Msa0984310:intron | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | + | chr6_4:28374314-28374333 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | - | chr6_4:28374393-28374412 | Msa0984310:CDS | 40.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | - | chr6_4:28373039-28373058 | Msa0984310:CDS | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | - | chr6_4:28373073-28373092 | Msa0984310:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | + | chr6_4:28373119-28373138 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | + | chr6_4:28373126-28373145 | None:intergenic | 45.0% | |
| GCCAGCATTCAAACAAGCAT+TGG | - | chr6_4:28373159-28373178 | Msa0984310:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | + | chr6_4:28373293-28373312 | None:intergenic | 45.0% | |
| TGGAGAGGAAAAAACAGTGC+CGG | + | chr6_4:28373708-28373727 | None:intergenic | 45.0% | |
| GACGCTGATGAAATTTGGAG+AGG | + | chr6_4:28373723-28373742 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | - | chr6_4:28374025-28374044 | Msa0984310:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | - | chr6_4:28374054-28374073 | Msa0984310:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | + | chr6_4:28374062-28374081 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | - | chr6_4:28374209-28374228 | Msa0984310:intron | 45.0% | |
| AAACACACACGAAACCAACC+TGG | + | chr6_4:28374226-28374245 | None:intergenic | 45.0% | |
| GTGTTTCGCAAACATGTCAG+AGG | - | chr6_4:28374240-28374259 | Msa0984310:intron | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | - | chr6_4:28374307-28374326 | Msa0984310:CDS | 45.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | - | chr6_4:28373039-28373058 | Msa0984310:CDS | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | - | chr6_4:28373073-28373092 | Msa0984310:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | + | chr6_4:28373119-28373138 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | + | chr6_4:28373126-28373145 | None:intergenic | 45.0% | |
| GCCAGCATTCAAACAAGCAT+TGG | - | chr6_4:28373159-28373178 | Msa0984310:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | + | chr6_4:28373293-28373312 | None:intergenic | 45.0% | |
| TGGAGAGGAAAAAACAGTGC+CGG | + | chr6_4:28373708-28373727 | None:intergenic | 45.0% | |
| GACGCTGATGAAATTTGGAG+AGG | + | chr6_4:28373723-28373742 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | - | chr6_4:28374025-28374044 | Msa0984310:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | - | chr6_4:28374054-28374073 | Msa0984310:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | + | chr6_4:28374062-28374081 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | - | chr6_4:28374209-28374228 | Msa0984310:intron | 45.0% | |
| AAACACACACGAAACCAACC+TGG | + | chr6_4:28374226-28374245 | None:intergenic | 45.0% | |
| GTGTTTCGCAAACATGTCAG+AGG | - | chr6_4:28374240-28374259 | Msa0984310:intron | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | - | chr6_4:28374307-28374326 | Msa0984310:CDS | 45.0% | |
| GCTCTCTTCCAAGACTACCA+TGG | - | chr6_4:28373133-28373152 | Msa0984310:CDS | 50.0% | |
| GTTTGAATGCTGGCATGCCA+TGG | + | chr6_4:28373153-28373172 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | + | chr6_4:28373229-28373248 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | + | chr6_4:28373230-28373249 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | - | chr6_4:28373229-28373248 | Msa0984310:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | + | chr6_4:28373234-28373253 | None:intergenic | 50.0% | |
| ! | GGTTGCGTTTTTGTGCCTCT+TGG | + | chr6_4:28373550-28373569 | None:intergenic | 50.0% |
| ACAAACCCATCAAACCCGCT+AGG | - | chr6_4:28373593-28373612 | Msa0984310:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | + | chr6_4:28373610-28373629 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | + | chr6_4:28373611-28373630 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | - | chr6_4:28373830-28373849 | Msa0984310:intron | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | + | chr6_4:28373834-28373853 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | - | chr6_4:28373902-28373921 | Msa0984310:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | - | chr6_4:28373947-28373966 | Msa0984310:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | - | chr6_4:28374067-28374086 | Msa0984310:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | - | chr6_4:28374295-28374314 | Msa0984310:CDS | 50.0% | |
| GCTCTCTTCCAAGACTACCA+TGG | - | chr6_4:28373133-28373152 | Msa0984310:CDS | 50.0% | |
| GTTTGAATGCTGGCATGCCA+TGG | + | chr6_4:28373153-28373172 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | + | chr6_4:28373229-28373248 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | + | chr6_4:28373230-28373249 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | - | chr6_4:28373229-28373248 | Msa0984310:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | + | chr6_4:28373234-28373253 | None:intergenic | 50.0% | |
| ! | GGTTGCGTTTTTGTGCCTCT+TGG | + | chr6_4:28373550-28373569 | None:intergenic | 50.0% |
| ACAAACCCATCAAACCCGCT+AGG | - | chr6_4:28373593-28373612 | Msa0984310:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | + | chr6_4:28373610-28373629 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | + | chr6_4:28373611-28373630 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | - | chr6_4:28373830-28373849 | Msa0984310:intron | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | + | chr6_4:28373834-28373853 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | - | chr6_4:28373902-28373921 | Msa0984310:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | - | chr6_4:28373947-28373966 | Msa0984310:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | - | chr6_4:28374067-28374086 | Msa0984310:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | - | chr6_4:28374295-28374314 | Msa0984310:CDS | 50.0% | |
| CTGGCATGCCATGGTAGTCT+TGG | + | chr6_4:28373144-28373163 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | + | chr6_4:28373601-28373620 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | - | chr6_4:28373609-28373628 | Msa0984310:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | - | chr6_4:28373842-28373861 | Msa0984310:intron | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | + | chr6_4:28373906-28373925 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | + | chr6_4:28373952-28373971 | None:intergenic | 55.0% |
| CTGGCATGCCATGGTAGTCT+TGG | + | chr6_4:28373144-28373163 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | + | chr6_4:28373601-28373620 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | - | chr6_4:28373609-28373628 | Msa0984310:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | - | chr6_4:28373842-28373861 | Msa0984310:intron | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | + | chr6_4:28373906-28373925 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | + | chr6_4:28373952-28373971 | None:intergenic | 55.0% |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | + | chr6_4:28373602-28373621 | None:intergenic | 60.0% |
| ATGGCGCCAACACGGAAACC+TGG | + | chr6_4:28373851-28373870 | None:intergenic | 60.0% | |
| CGGAGTAGATGGCGCCAACA+CGG | + | chr6_4:28373859-28373878 | None:intergenic | 60.0% | |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | + | chr6_4:28373602-28373621 | None:intergenic | 60.0% |
| ATGGCGCCAACACGGAAACC+TGG | + | chr6_4:28373851-28373870 | None:intergenic | 60.0% | |
| CGGAGTAGATGGCGCCAACA+CGG | + | chr6_4:28373859-28373878 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6_4 | gene | 28372786 | 28374417 | 28372786 | ID=Msa0984310;Name=Msa0984310 |
| chr6_4 | mRNA | 28372786 | 28374417 | 28372786 | ID=Msa0984310-mRNA-1;Parent=Msa0984310;Name=Msa0984310-mRNA-1;_AED=0.06;_eAED=0.06;_QI=0|0|0|1|1|0.66|3|0|472 |
| chr6_4 | exon | 28374271 | 28374417 | 28374271 | ID=Msa0984310-mRNA-1:exon:7970;Parent=Msa0984310-mRNA-1 |
| chr6_4 | exon | 28373868 | 28374160 | 28373868 | ID=Msa0984310-mRNA-1:exon:7969;Parent=Msa0984310-mRNA-1 |
| chr6_4 | exon | 28372786 | 28373761 | 28372786 | ID=Msa0984310-mRNA-1:exon:7968;Parent=Msa0984310-mRNA-1 |
| chr6_4 | CDS | 28374271 | 28374417 | 28374271 | ID=Msa0984310-mRNA-1:cds;Parent=Msa0984310-mRNA-1 |
| chr6_4 | CDS | 28373868 | 28374160 | 28373868 | ID=Msa0984310-mRNA-1:cds;Parent=Msa0984310-mRNA-1 |
| chr6_4 | CDS | 28372786 | 28373761 | 28372786 | ID=Msa0984310-mRNA-1:cds;Parent=Msa0984310-mRNA-1 |
| Gene Sequence |
| Protein sequence |
