Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297260 | sp|Q00257|1A12_CUCMA | 75.676 | 481 | 103 | 4 | 1 | 473 | 1 | 475 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297260 | A0A072V097 | 99.366 | 473 | 3 | 0 | 1 | 473 | 1 | 473 | 0.0 | 983 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048950 | Msa1297260 | 0.801419 | 9.086430e-49 | -8.615850e-47 |
| Msa0603950 | Msa1297260 | 0.800317 | 1.525059e-48 | -8.615850e-47 |
| Msa0147680 | Msa1297260 | 0.811898 | 5.559118e-51 | -8.615850e-47 |
| Msa0210790 | Msa1297260 | 0.804021 | 2.637730e-49 | -8.615850e-47 |
| Msa0210850 | Msa1297260 | 0.817758 | 2.793039e-52 | -8.615850e-47 |
| Msa1297260 | Msa1449770 | 0.801060 | 1.075897e-48 | -8.615850e-47 |
| Msa0984310 | Msa1297260 | 0.900080 | 1.047638e-77 | -8.615850e-47 |
| Msa1205330 | Msa1297260 | 0.872074 | 4.204242e-67 | -8.615850e-47 |
| Msa0483820 | Msa1297260 | 0.927145 | 1.766977e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297260 | MtrunA17_Chr4g0054371 | 99.366 | 473 | 3 | 0 | 1 | 473 | 1 | 473 | 0.0 | 983 |
| Msa1297260 | MtrunA17_Chr5g0400831 | 83.402 | 482 | 67 | 5 | 1 | 471 | 1 | 480 | 0.0 | 835 |
| Msa1297260 | MtrunA17_Chr3g0135251 | 69.907 | 432 | 123 | 3 | 3 | 433 | 1 | 426 | 0.0 | 657 |
| Msa1297260 | MtrunA17_Chr8g0387481 | 55.876 | 451 | 187 | 4 | 2 | 450 | 10 | 450 | 0.0 | 553 |
| Msa1297260 | MtrunA17_Chr6g0488041 | 59.861 | 431 | 163 | 4 | 4 | 434 | 14 | 434 | 0.0 | 552 |
| Msa1297260 | MtrunA17_Chr8g0389311 | 57.895 | 437 | 166 | 5 | 4 | 439 | 12 | 431 | 0.0 | 534 |
| Msa1297260 | MtrunA17_Chr8g0389321 | 57.895 | 437 | 166 | 5 | 4 | 439 | 12 | 431 | 0.0 | 534 |
| Msa1297260 | MtrunA17_Chr8g0348351 | 53.759 | 439 | 189 | 3 | 2 | 438 | 9 | 435 | 0.0 | 520 |
| Msa1297260 | MtrunA17_Chr7g0248681 | 53.103 | 435 | 191 | 3 | 2 | 434 | 9 | 432 | 5.34e-178 | 507 |
| Msa1297260 | MtrunA17_Chr6g0475681 | 45.517 | 435 | 225 | 5 | 4 | 437 | 104 | 527 | 2.00e-146 | 429 |
| Msa1297260 | MtrunA17_Chr5g0398431 | 41.687 | 415 | 232 | 3 | 16 | 430 | 84 | 488 | 1.68e-125 | 374 |
| Msa1297260 | MtrunA17_Chr5g0412871 | 26.966 | 178 | 122 | 6 | 79 | 253 | 100 | 272 | 1.98e-14 | 75.5 |
| Msa1297260 | MtrunA17_Chr8g0345201 | 22.449 | 343 | 235 | 13 | 112 | 433 | 182 | 514 | 3.12e-13 | 71.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1297260 | AT4G37770.1 | 71.698 | 477 | 123 | 4 | 1 | 473 | 1 | 469 | 0.0 | 715 |
| Msa1297260 | AT3G49700.1 | 74.153 | 472 | 109 | 4 | 1 | 466 | 1 | 465 | 0.0 | 711 |
| Msa1297260 | AT5G65800.1 | 73.517 | 472 | 112 | 5 | 1 | 466 | 1 | 465 | 0.0 | 703 |
| Msa1297260 | AT2G22810.1 | 69.023 | 481 | 134 | 3 | 1 | 473 | 1 | 474 | 0.0 | 691 |
| Msa1297260 | AT4G08040.1 | 66.234 | 462 | 146 | 3 | 3 | 463 | 1 | 453 | 0.0 | 650 |
| Msa1297260 | AT4G26200.1 | 58.333 | 432 | 171 | 3 | 4 | 434 | 18 | 441 | 0.0 | 533 |
| Msa1297260 | AT3G61510.1 | 54.147 | 434 | 187 | 3 | 2 | 435 | 9 | 430 | 0.0 | 519 |
| Msa1297260 | AT1G01480.1 | 51.592 | 471 | 212 | 5 | 3 | 464 | 11 | 474 | 9.48e-180 | 513 |
| Msa1297260 | AT4G11280.1 | 53.118 | 433 | 194 | 2 | 1 | 433 | 12 | 435 | 9.02e-177 | 505 |
| Msa1297260 | AT1G01480.2 | 51.733 | 375 | 165 | 5 | 99 | 464 | 1 | 368 | 1.40e-140 | 409 |
| Msa1297260 | AT5G51690.1 | 43.590 | 429 | 231 | 4 | 4 | 431 | 69 | 487 | 3.53e-139 | 409 |
| Msa1297260 | AT1G62960.1 | 42.227 | 431 | 231 | 8 | 4 | 431 | 132 | 547 | 6.33e-126 | 377 |
| Msa1297260 | AT5G51690.2 | 42.932 | 382 | 200 | 4 | 50 | 431 | 1 | 364 | 9.23e-121 | 358 |
| Msa1297260 | AT1G23310.2 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 7.08e-15 | 77.0 |
| Msa1297260 | AT1G23310.1 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 1.28e-14 | 76.3 |
| Msa1297260 | AT1G70580.4 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.57e-14 | 75.1 |
| Msa1297260 | AT1G70580.2 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.57e-14 | 75.1 |
| Msa1297260 | AT1G70580.3 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.57e-14 | 75.1 |
| Msa1297260 | AT1G70580.1 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.57e-14 | 75.1 |
| Msa1297260 | AT2G22250.1 | 22.222 | 270 | 182 | 7 | 105 | 369 | 106 | 352 | 5.07e-13 | 71.2 |
| Msa1297260 | AT1G77670.1 | 24.267 | 375 | 237 | 16 | 71 | 431 | 92 | 433 | 1.07e-12 | 70.1 |
| Msa1297260 | AT2G24850.1 | 23.724 | 333 | 211 | 12 | 114 | 433 | 117 | 419 | 1.14e-11 | 67.0 |
| Msa1297260 | AT2G20610.1 | 22.778 | 360 | 229 | 13 | 88 | 433 | 111 | 435 | 3.35e-11 | 65.9 |
| Msa1297260 | AT4G23600.1 | 23.118 | 372 | 244 | 13 | 87 | 444 | 78 | 421 | 4.19e-11 | 65.1 |
Find 91 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTACTCCTTTGACTTTA+AGG | 0.007055 | 8_3:-57264102 | None:intergenic |
| CGTCAGAACAAGCTTGTTTC+GGG | 0.214801 | 8_3:+57264559 | Msa1297260:CDS |
| CAAGACTCTTCATACTTCTT+AGG | 0.254225 | 8_3:+57263354 | Msa1297260:CDS |
| GAGAGCAAGTTCACGGAATA+TGG | 0.287004 | 8_3:-57263642 | None:intergenic |
| TCCATGACGCTGATGAAGTT+TGG | 0.292320 | 8_3:-57264259 | None:intergenic |
| GTTACTTACCCTGGATAATA+AGG | 0.296953 | 8_3:-57263848 | None:intergenic |
| ACCTGGCAAACCCAAGTCTT+TGG | 0.309354 | 8_3:-57264365 | None:intergenic |
| CAACACATTTGAAGCTGAAA+TGG | 0.312708 | 8_3:+57264663 | Msa1297260:CDS |
| ACGTCAGAACAAGCTTGTTT+CGG | 0.332943 | 8_3:+57264558 | Msa1297260:CDS |
| ACAAGCATTGGTAGATTTCA+TGG | 0.337094 | 8_3:+57263697 | Msa1297260:CDS |
| GCTTTCCAAGCAGCTAATTC+CGG | 0.349870 | 8_3:-57264593 | None:intergenic |
| CCCATTTGAATAATTCCTTT+AGG | 0.350296 | 8_3:-57263420 | None:intergenic |
| TTCGGTTACTTGAAAGTTGT+TGG | 0.352316 | 8_3:-57264038 | None:intergenic |
| CTTCCTACTCCTTATTATCC+AGG | 0.362035 | 8_3:+57263839 | Msa1297260:CDS |
| GAGTCCACTGGCAATGTTAA+TGG | 0.369447 | 8_3:+57264841 | Msa1297260:CDS |
| ACAAATATTATCAGCGTCAT+TGG | 0.372388 | 8_3:-57264314 | None:intergenic |
| GAGGAATGCTTCTCCTTTCT+CGG | 0.379843 | 8_3:-57263816 | None:intergenic |
| TCCTAAAGGAATTATTCAAA+TGG | 0.384178 | 8_3:+57263419 | Msa1297260:CDS |
| TCCAAAGACTTGGGTTTGCC+AGG | 0.387995 | 8_3:+57264364 | Msa1297260:CDS |
| TTGGAGCTTGTGCAATGTAT+TGG | 0.402052 | 8_3:-57264019 | None:intergenic |
| GTGGTGCCTAGCGGGTTTGA+TGG | 0.413274 | 8_3:-57264133 | None:intergenic |
| TTGAAGCTGAAATGGAACTA+TGG | 0.421415 | 8_3:+57264671 | Msa1297260:CDS |
| CATTTCAGCTTCAAATGTGT+TGG | 0.425676 | 8_3:-57264662 | None:intergenic |
| GATTTCATGGCTGAAATTAG+AGG | 0.438990 | 8_3:+57263710 | Msa1297260:CDS |
| CTATAGTCTTTCCAAAGACT+TGG | 0.439881 | 8_3:+57264354 | Msa1297260:CDS |
| AGAGATCTTAAGTGGAGAAC+TGG | 0.441917 | 8_3:+57263983 | Msa1297260:CDS |
| TGCTTGTTGCAATGCTTGTT+CGG | 0.447826 | 8_3:-57264056 | None:intergenic |
| GCTAAGAATCCAGATGCATC+TGG | 0.449521 | 8_3:+57263599 | Msa1297260:CDS |
| TTGACATTGTGGTGCCTAGC+GGG | 0.450378 | 8_3:-57264141 | None:intergenic |
| GATTTGATAGAGATCTTAAG+TGG | 0.457172 | 8_3:+57263975 | Msa1297260:intron |
| AGCTGCTTGGAAAGCAATGC+AGG | 0.457790 | 8_3:+57264601 | Msa1297260:CDS |
| TACCTTCTTTCCGCCATGCT+TGG | 0.457804 | 8_3:+57264481 | Msa1297260:CDS |
| ACCAATGCTTGTTTGAATGC+TGG | 0.468828 | 8_3:-57263686 | None:intergenic |
| GGATTGTGAACATTATCGTA+TGG | 0.469336 | 8_3:-57263399 | None:intergenic |
| CAGCTTCAAATGTGTTGGAA+TGG | 0.474679 | 8_3:-57264657 | None:intergenic |
| GGTTTGCCAGGTTTCCGTGT+TGG | 0.478336 | 8_3:+57264376 | Msa1297260:CDS |
| CTTTGAAACTAGCAATGAAA+AGG | 0.480723 | 8_3:+57264800 | Msa1297260:CDS |
| GCCGAAGCTTGACATCTTCG+TGG | 0.488316 | 8_3:-57264437 | None:intergenic |
| GAGAAATTTACTCACTAAGT+GGG | 0.491942 | 8_3:+57264885 | Msa1297260:CDS |
| CCTAAAGGAATTATTCAAAT+GGG | 0.495148 | 8_3:+57263420 | Msa1297260:CDS |
| CTAAGAAGTATGAAGAGTCT+TGG | 0.495354 | 8_3:-57263353 | None:intergenic |
| GCTTTCGTTGTTGAGTCCAC+TGG | 0.495466 | 8_3:+57264829 | Msa1297260:CDS |
| ACTCTTCATACTTCTTAGGA+TGG | 0.496264 | 8_3:+57263358 | Msa1297260:CDS |
| AGAGAAATTTACTCACTAAG+TGG | 0.501044 | 8_3:+57264884 | Msa1297260:CDS |
| CACCAAGCATGGCGGAAAGA+AGG | 0.506326 | 8_3:-57264483 | None:intergenic |
| CCTTAAAGTCAAAGGAGTAA+TGG | 0.507013 | 8_3:+57264102 | Msa1297260:CDS |
| GATAATGTTCACAATCCTAA+AGG | 0.507661 | 8_3:+57263405 | Msa1297260:CDS |
| GATTGTGAACATTATCGTAT+GGG | 0.512439 | 8_3:-57263398 | None:intergenic |
| CTGGCATGCCATGGTAGTCT+TGG | 0.514145 | 8_3:-57263667 | None:intergenic |
| TGGTGCCTAGCGGGTTTGAT+GGG | 0.518811 | 8_3:-57264132 | None:intergenic |
| TAATTCACTCCTTGACATTG+TGG | 0.520906 | 8_3:-57264152 | None:intergenic |
| GCATCTGGATTCAAAAGAGA+TGG | 0.523681 | 8_3:+57263614 | Msa1297260:CDS |
| TATAGTCTTTCCAAAGACTT+GGG | 0.530946 | 8_3:+57264355 | Msa1297260:CDS |
| CTCTTCATACTTCTTAGGAT+GGG | 0.532693 | 8_3:+57263359 | Msa1297260:CDS |
| TTCCTACTCCTTATTATCCA+GGG | 0.533548 | 8_3:+57263840 | Msa1297260:CDS |
| TCCAAACTTCATCAGCGTCA+TGG | 0.537282 | 8_3:+57264258 | Msa1297260:CDS |
| GCCAGCATTCAAACAAGCAT+TGG | 0.538139 | 8_3:+57263685 | Msa1297260:CDS |
| GCCACGAAGATGTCAAGCTT+CGG | 0.543189 | 8_3:+57264436 | Msa1297260:CDS |
| ATGGCGCCAACACGGAAACC+TGG | 0.544960 | 8_3:-57264382 | None:intergenic |
| CGGAGTAGATGGCGCCAACA+CGG | 0.550123 | 8_3:-57264390 | None:intergenic |
| CTTGGAAGAGAGCAAGTTCA+CGG | 0.552418 | 8_3:-57263649 | None:intergenic |
| GTTTGAATGCTGGCATGCCA+TGG | 0.557856 | 8_3:-57263676 | None:intergenic |
| TCTTGTCATTGTACAGAACC+AGG | 0.559141 | 8_3:+57264739 | Msa1297260:CDS |
| AAAAGCCGGAATTAGCTGCT+TGG | 0.561044 | 8_3:+57264588 | Msa1297260:CDS |
| GCGGTGAGAACTATGTGGTT+GGG | 0.564851 | 8_3:-57263752 | None:intergenic |
| GTGAAATGTTTAAACCAACT+TGG | 0.565975 | 8_3:-57264708 | None:intergenic |
| AAGAAAATAGTGTACCAAGT+TGG | 0.566563 | 8_3:+57264694 | Msa1297260:CDS |
| AAAGCAACTTGTAATAGTCA+TGG | 0.582182 | 8_3:+57263330 | Msa1297260:CDS |
| AAACGCAACCTTAAAGTCAA+AGG | 0.585930 | 8_3:+57264094 | Msa1297260:CDS |
| TGCGGTGAGAACTATGTGGT+TGG | 0.600293 | 8_3:-57263753 | None:intergenic |
| AAACACACACGAAACCAACC+TGG | 0.602737 | 8_3:-57264757 | None:intergenic |
| CATCTACTCCGAAAATGATA+CGG | 0.603585 | 8_3:+57264402 | Msa1297260:CDS |
| GTCATTGTACAGAACCAGGT+TGG | 0.607425 | 8_3:+57264743 | Msa1297260:CDS |
| AACCACATAGTTCTCACCGC+AGG | 0.611056 | 8_3:+57263755 | Msa1297260:CDS |
| CTGGATAATAAGGAGTAGGA+AGG | 0.613137 | 8_3:-57263838 | None:intergenic |
| GATAATAAGGAGTAGGAAGG+AGG | 0.616132 | 8_3:-57263835 | None:intergenic |
| ATAAGCGACGAGATTTACTC+CGG | 0.625337 | 8_3:+57264220 | Msa1297260:CDS |
| TGATCAACGTGATCAACAAG+AGG | 0.629251 | 8_3:+57264927 | Msa1297260:CDS |
| GTTGGTTTAAACATTTCACC+TGG | 0.630672 | 8_3:+57264712 | Msa1297260:CDS |
| AACGTGATCAACAAGAGGAA+CGG | 0.630998 | 8_3:+57264932 | Msa1297260:CDS |
| TACCCTGGATAATAAGGAGT+AGG | 0.632955 | 8_3:-57263842 | None:intergenic |
| CGCTAGGCACCACAATGTCA+AGG | 0.634181 | 8_3:+57264143 | Msa1297260:CDS |
| AACACCATTAACATTGCCAG+TGG | 0.635347 | 8_3:-57264845 | None:intergenic |
| CTTGACATTGTGGTGCCTAG+CGG | 0.638500 | 8_3:-57264142 | None:intergenic |
| GACGCTGATGAAGTTTGGAG+AGG | 0.643971 | 8_3:-57264254 | None:intergenic |
| ACAAACCCATCAAACCCGCT+AGG | 0.648673 | 8_3:+57264127 | Msa1297260:CDS |
| GCTCTCTTCCAAGACTACCA+TGG | 0.688190 | 8_3:+57263659 | Msa1297260:CDS |
| ATTTGCTGAAGTAGAACCTG+CGG | 0.695572 | 8_3:-57263771 | None:intergenic |
| GTACAATGACAAGATGAACC+AGG | 0.699733 | 8_3:-57264730 | None:intergenic |
| ATTGCAACAAGCATACCAAG+AGG | 0.713636 | 8_3:+57264066 | Msa1297260:CDS |
| AACCTGCGGTGAGAACTATG+TGG | 0.788440 | 8_3:-57263757 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGTACAAATAAATTTTTA+AGG | - | chr8_3:57263519-57263538 | None:intergenic | 10.0% |
| !!! | TAAGTACAAATAAATTTTTA+AGG | - | chr8_3:57263519-57263538 | None:intergenic | 10.0% |
| !! | GCAAAAGAAAAAAAAAATAT+TGG | - | chr8_3:57263547-57263566 | None:intergenic | 15.0% |
| !! | GCAAAAGAAAAAAAAAATAT+TGG | - | chr8_3:57263547-57263566 | None:intergenic | 15.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | + | chr8_3:57263419-57263438 | Msa1297260:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | + | chr8_3:57263420-57263439 | Msa1297260:CDS | 25.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | + | chr8_3:57263419-57263438 | Msa1297260:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | + | chr8_3:57263420-57263439 | Msa1297260:CDS | 25.0% |
| AAAGCAACTTGTAATAGTCA+TGG | + | chr8_3:57263330-57263349 | Msa1297260:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | - | chr8_3:57263401-57263420 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | + | chr8_3:57263405-57263424 | Msa1297260:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | - | chr8_3:57263423-57263442 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | - | chr8_3:57263860-57263879 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | + | chr8_3:57263975-57263994 | Msa1297260:intron | 30.0% | |
| ACAAATATTATCAGCGTCAT+TGG | - | chr8_3:57264317-57264336 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | + | chr8_3:57264355-57264374 | Msa1297260:CDS | 30.0% | |
| ! | GTTTTCTGCTAAGTAGTTTT+TGG | - | chr8_3:57264521-57264540 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | + | chr8_3:57264615-57264634 | Msa1297260:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | + | chr8_3:57264626-57264645 | Msa1297260:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | + | chr8_3:57264694-57264713 | Msa1297260:CDS | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | - | chr8_3:57264711-57264730 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | + | chr8_3:57264800-57264819 | Msa1297260:CDS | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | + | chr8_3:57264884-57264903 | Msa1297260:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | + | chr8_3:57264885-57264904 | Msa1297260:CDS | 30.0% | |
| AAAGCAACTTGTAATAGTCA+TGG | + | chr8_3:57263330-57263349 | Msa1297260:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | - | chr8_3:57263401-57263420 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | + | chr8_3:57263405-57263424 | Msa1297260:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | - | chr8_3:57263423-57263442 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | - | chr8_3:57263860-57263879 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | + | chr8_3:57263975-57263994 | Msa1297260:intron | 30.0% | |
| ACAAATATTATCAGCGTCAT+TGG | - | chr8_3:57264317-57264336 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | + | chr8_3:57264355-57264374 | Msa1297260:CDS | 30.0% | |
| ! | GTTTTCTGCTAAGTAGTTTT+TGG | - | chr8_3:57264521-57264540 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | + | chr8_3:57264615-57264634 | Msa1297260:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | + | chr8_3:57264626-57264645 | Msa1297260:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | + | chr8_3:57264694-57264713 | Msa1297260:CDS | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | - | chr8_3:57264711-57264730 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | + | chr8_3:57264800-57264819 | Msa1297260:CDS | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | + | chr8_3:57264884-57264903 | Msa1297260:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | + | chr8_3:57264885-57264904 | Msa1297260:CDS | 30.0% | |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | - | chr8_3:57263356-57263375 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | + | chr8_3:57263354-57263373 | Msa1297260:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | + | chr8_3:57263358-57263377 | Msa1297260:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | + | chr8_3:57263359-57263378 | Msa1297260:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | - | chr8_3:57263402-57263421 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | + | chr8_3:57263573-57263592 | Msa1297260:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | + | chr8_3:57263697-57263716 | Msa1297260:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | + | chr8_3:57263710-57263729 | Msa1297260:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | + | chr8_3:57263840-57263859 | Msa1297260:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | - | chr8_3:57263851-57263870 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | - | chr8_3:57264041-57264060 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | + | chr8_3:57264094-57264113 | Msa1297260:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | - | chr8_3:57264105-57264124 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | + | chr8_3:57264102-57264121 | Msa1297260:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | - | chr8_3:57264155-57264174 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | + | chr8_3:57264354-57264373 | Msa1297260:CDS | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | + | chr8_3:57264402-57264421 | Msa1297260:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | - | chr8_3:57264413-57264432 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | - | chr8_3:57264497-57264516 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | + | chr8_3:57264614-57264633 | Msa1297260:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | - | chr8_3:57264665-57264684 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | + | chr8_3:57264663-57264682 | Msa1297260:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | + | chr8_3:57264671-57264690 | Msa1297260:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | + | chr8_3:57264712-57264731 | Msa1297260:CDS | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | + | chr8_3:57264893-57264912 | Msa1297260:CDS | 35.0% |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | - | chr8_3:57263356-57263375 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | + | chr8_3:57263354-57263373 | Msa1297260:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | + | chr8_3:57263358-57263377 | Msa1297260:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | + | chr8_3:57263359-57263378 | Msa1297260:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | - | chr8_3:57263402-57263421 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | + | chr8_3:57263573-57263592 | Msa1297260:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | + | chr8_3:57263697-57263716 | Msa1297260:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | + | chr8_3:57263710-57263729 | Msa1297260:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | + | chr8_3:57263840-57263859 | Msa1297260:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | - | chr8_3:57263851-57263870 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | - | chr8_3:57264041-57264060 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | + | chr8_3:57264094-57264113 | Msa1297260:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | - | chr8_3:57264105-57264124 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | + | chr8_3:57264102-57264121 | Msa1297260:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | - | chr8_3:57264155-57264174 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | + | chr8_3:57264354-57264373 | Msa1297260:CDS | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | + | chr8_3:57264402-57264421 | Msa1297260:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | - | chr8_3:57264413-57264432 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | - | chr8_3:57264497-57264516 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | + | chr8_3:57264614-57264633 | Msa1297260:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | - | chr8_3:57264665-57264684 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | + | chr8_3:57264663-57264682 | Msa1297260:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | + | chr8_3:57264671-57264690 | Msa1297260:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | + | chr8_3:57264712-57264731 | Msa1297260:CDS | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | + | chr8_3:57264893-57264912 | Msa1297260:CDS | 35.0% |
| ! | CTTTTGAATCCAGATGCATC+TGG | - | chr8_3:57263611-57263630 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | + | chr8_3:57263614-57263633 | Msa1297260:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+TGG | - | chr8_3:57263689-57263708 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | - | chr8_3:57263774-57263793 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | + | chr8_3:57263803-57263822 | Msa1297260:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | - | chr8_3:57263838-57263857 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | - | chr8_3:57263841-57263860 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | + | chr8_3:57263839-57263858 | Msa1297260:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | - | chr8_3:57263845-57263864 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | + | chr8_3:57263983-57264002 | Msa1297260:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | - | chr8_3:57264022-57264041 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | - | chr8_3:57264059-57264078 | None:intergenic | 40.0% |
| ATTGCAACAAGCATACCAAG+AGG | + | chr8_3:57264066-57264085 | Msa1297260:CDS | 40.0% | |
| ATAAGCGACGAGATTTACTC+CGG | + | chr8_3:57264220-57264239 | Msa1297260:CDS | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | - | chr8_3:57264404-57264423 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | - | chr8_3:57264494-57264513 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | + | chr8_3:57264558-57264577 | Msa1297260:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | + | chr8_3:57264574-57264593 | Msa1297260:CDS | 40.0% |
| CAGCTTCAAATGTGTTGGAA+TGG | - | chr8_3:57264660-57264679 | None:intergenic | 40.0% | |
| GTACAATGACAAGATGAACC+AGG | - | chr8_3:57264733-57264752 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | + | chr8_3:57264739-57264758 | Msa1297260:CDS | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | - | chr8_3:57264848-57264867 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | + | chr8_3:57264927-57264946 | Msa1297260:CDS | 40.0% | |
| AACGTGATCAACAAGAGGAA+CGG | + | chr8_3:57264932-57264951 | Msa1297260:CDS | 40.0% | |
| ! | CTTTTGAATCCAGATGCATC+TGG | - | chr8_3:57263611-57263630 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | + | chr8_3:57263614-57263633 | Msa1297260:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+TGG | - | chr8_3:57263689-57263708 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | - | chr8_3:57263774-57263793 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | + | chr8_3:57263803-57263822 | Msa1297260:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | - | chr8_3:57263838-57263857 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | - | chr8_3:57263841-57263860 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | + | chr8_3:57263839-57263858 | Msa1297260:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | - | chr8_3:57263845-57263864 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | + | chr8_3:57263983-57264002 | Msa1297260:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | - | chr8_3:57264022-57264041 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | - | chr8_3:57264059-57264078 | None:intergenic | 40.0% |
| ATTGCAACAAGCATACCAAG+AGG | + | chr8_3:57264066-57264085 | Msa1297260:CDS | 40.0% | |
| ATAAGCGACGAGATTTACTC+CGG | + | chr8_3:57264220-57264239 | Msa1297260:CDS | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | - | chr8_3:57264404-57264423 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | - | chr8_3:57264494-57264513 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | + | chr8_3:57264558-57264577 | Msa1297260:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | + | chr8_3:57264574-57264593 | Msa1297260:CDS | 40.0% |
| CAGCTTCAAATGTGTTGGAA+TGG | - | chr8_3:57264660-57264679 | None:intergenic | 40.0% | |
| GTACAATGACAAGATGAACC+AGG | - | chr8_3:57264733-57264752 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | + | chr8_3:57264739-57264758 | Msa1297260:CDS | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | - | chr8_3:57264848-57264867 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | + | chr8_3:57264927-57264946 | Msa1297260:CDS | 40.0% | |
| AACGTGATCAACAAGAGGAA+CGG | + | chr8_3:57264932-57264951 | Msa1297260:CDS | 40.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | + | chr8_3:57263565-57263584 | Msa1297260:intron | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | + | chr8_3:57263599-57263618 | Msa1297260:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | - | chr8_3:57263645-57263664 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | - | chr8_3:57263652-57263671 | None:intergenic | 45.0% | |
| GCCAGCATTCAAACAAGCAT+TGG | + | chr8_3:57263685-57263704 | Msa1297260:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | - | chr8_3:57263819-57263838 | None:intergenic | 45.0% | |
| TGGAGAGGAAAAAACAGTGC+CGG | - | chr8_3:57264242-57264261 | None:intergenic | 45.0% | |
| TCCAAACTTCATCAGCGTCA+TGG | + | chr8_3:57264258-57264277 | Msa1297260:CDS | 45.0% | |
| TCCATGACGCTGATGAAGTT+TGG | - | chr8_3:57264262-57264281 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | + | chr8_3:57264559-57264578 | Msa1297260:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | + | chr8_3:57264588-57264607 | Msa1297260:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | - | chr8_3:57264596-57264615 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | + | chr8_3:57264743-57264762 | Msa1297260:CDS | 45.0% | |
| AAACACACACGAAACCAACC+TGG | - | chr8_3:57264760-57264779 | None:intergenic | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | + | chr8_3:57264841-57264860 | Msa1297260:CDS | 45.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | + | chr8_3:57263565-57263584 | Msa1297260:intron | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | + | chr8_3:57263599-57263618 | Msa1297260:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | - | chr8_3:57263645-57263664 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | - | chr8_3:57263652-57263671 | None:intergenic | 45.0% | |
| GCCAGCATTCAAACAAGCAT+TGG | + | chr8_3:57263685-57263704 | Msa1297260:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | - | chr8_3:57263819-57263838 | None:intergenic | 45.0% | |
| TGGAGAGGAAAAAACAGTGC+CGG | - | chr8_3:57264242-57264261 | None:intergenic | 45.0% | |
| TCCAAACTTCATCAGCGTCA+TGG | + | chr8_3:57264258-57264277 | Msa1297260:CDS | 45.0% | |
| TCCATGACGCTGATGAAGTT+TGG | - | chr8_3:57264262-57264281 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | + | chr8_3:57264559-57264578 | Msa1297260:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | + | chr8_3:57264588-57264607 | Msa1297260:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | - | chr8_3:57264596-57264615 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | + | chr8_3:57264743-57264762 | Msa1297260:CDS | 45.0% | |
| AAACACACACGAAACCAACC+TGG | - | chr8_3:57264760-57264779 | None:intergenic | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | + | chr8_3:57264841-57264860 | Msa1297260:CDS | 45.0% | |
| GCTCTCTTCCAAGACTACCA+TGG | + | chr8_3:57263659-57263678 | Msa1297260:CDS | 50.0% | |
| GTTTGAATGCTGGCATGCCA+TGG | - | chr8_3:57263679-57263698 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | - | chr8_3:57263755-57263774 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | - | chr8_3:57263756-57263775 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | + | chr8_3:57263755-57263774 | Msa1297260:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | - | chr8_3:57263760-57263779 | None:intergenic | 50.0% | |
| ! | GGTTGCGTTTTTGTGCCTCT+TGG | - | chr8_3:57264084-57264103 | None:intergenic | 50.0% |
| ACAAACCCATCAAACCCGCT+AGG | + | chr8_3:57264127-57264146 | Msa1297260:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | - | chr8_3:57264144-57264163 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | - | chr8_3:57264145-57264164 | None:intergenic | 50.0% | |
| GACGCTGATGAAGTTTGGAG+AGG | - | chr8_3:57264257-57264276 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | + | chr8_3:57264364-57264383 | Msa1297260:CDS | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | - | chr8_3:57264368-57264387 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | + | chr8_3:57264436-57264455 | Msa1297260:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | + | chr8_3:57264481-57264500 | Msa1297260:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | + | chr8_3:57264601-57264620 | Msa1297260:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | + | chr8_3:57264829-57264848 | Msa1297260:CDS | 50.0% | |
| GCTCTCTTCCAAGACTACCA+TGG | + | chr8_3:57263659-57263678 | Msa1297260:CDS | 50.0% | |
| GTTTGAATGCTGGCATGCCA+TGG | - | chr8_3:57263679-57263698 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | - | chr8_3:57263755-57263774 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | - | chr8_3:57263756-57263775 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | + | chr8_3:57263755-57263774 | Msa1297260:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | - | chr8_3:57263760-57263779 | None:intergenic | 50.0% | |
| ! | GGTTGCGTTTTTGTGCCTCT+TGG | - | chr8_3:57264084-57264103 | None:intergenic | 50.0% |
| ACAAACCCATCAAACCCGCT+AGG | + | chr8_3:57264127-57264146 | Msa1297260:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | - | chr8_3:57264144-57264163 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | - | chr8_3:57264145-57264164 | None:intergenic | 50.0% | |
| GACGCTGATGAAGTTTGGAG+AGG | - | chr8_3:57264257-57264276 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | + | chr8_3:57264364-57264383 | Msa1297260:CDS | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | - | chr8_3:57264368-57264387 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | + | chr8_3:57264436-57264455 | Msa1297260:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | + | chr8_3:57264481-57264500 | Msa1297260:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | + | chr8_3:57264601-57264620 | Msa1297260:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | + | chr8_3:57264829-57264848 | Msa1297260:CDS | 50.0% | |
| CTGGCATGCCATGGTAGTCT+TGG | - | chr8_3:57263670-57263689 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | - | chr8_3:57264135-57264154 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | + | chr8_3:57264143-57264162 | Msa1297260:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | + | chr8_3:57264376-57264395 | Msa1297260:CDS | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | - | chr8_3:57264440-57264459 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | - | chr8_3:57264486-57264505 | None:intergenic | 55.0% |
| CTGGCATGCCATGGTAGTCT+TGG | - | chr8_3:57263670-57263689 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | - | chr8_3:57264135-57264154 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | + | chr8_3:57264143-57264162 | Msa1297260:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | + | chr8_3:57264376-57264395 | Msa1297260:CDS | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | - | chr8_3:57264440-57264459 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | - | chr8_3:57264486-57264505 | None:intergenic | 55.0% |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | - | chr8_3:57264136-57264155 | None:intergenic | 60.0% |
| ATGGCGCCAACACGGAAACC+TGG | - | chr8_3:57264385-57264404 | None:intergenic | 60.0% | |
| CGGAGTAGATGGCGCCAACA+CGG | - | chr8_3:57264393-57264412 | None:intergenic | 60.0% | |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | - | chr8_3:57264136-57264155 | None:intergenic | 60.0% |
| ATGGCGCCAACACGGAAACC+TGG | - | chr8_3:57264385-57264404 | None:intergenic | 60.0% | |
| CGGAGTAGATGGCGCCAACA+CGG | - | chr8_3:57264393-57264412 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_3 | gene | 57263312 | 57264957 | 57263312 | ID=Msa1297260;Name=Msa1297260 |
| chr8_3 | mRNA | 57263312 | 57264957 | 57263312 | ID=Msa1297260-mRNA-1;Parent=Msa1297260;Name=Msa1297260-mRNA-1;_AED=0.09;_eAED=0.09;_QI=0|0|0|1|1|1|3|0|473 |
| chr8_3 | exon | 57263312 | 57263458 | 57263312 | ID=Msa1297260-mRNA-1:exon:16407;Parent=Msa1297260-mRNA-1 |
| chr8_3 | exon | 57263569 | 57263861 | 57263569 | ID=Msa1297260-mRNA-1:exon:16408;Parent=Msa1297260-mRNA-1 |
| chr8_3 | exon | 57263976 | 57264957 | 57263976 | ID=Msa1297260-mRNA-1:exon:16409;Parent=Msa1297260-mRNA-1 |
| chr8_3 | CDS | 57263312 | 57263458 | 57263312 | ID=Msa1297260-mRNA-1:cds;Parent=Msa1297260-mRNA-1 |
| chr8_3 | CDS | 57263569 | 57263861 | 57263569 | ID=Msa1297260-mRNA-1:cds;Parent=Msa1297260-mRNA-1 |
| chr8_3 | CDS | 57263976 | 57264957 | 57263976 | ID=Msa1297260-mRNA-1:cds;Parent=Msa1297260-mRNA-1 |
| Gene Sequence |
| Protein sequence |
