Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205330 | XP_013457509.1 | 99.366 | 473 | 3 | 0 | 1 | 473 | 1 | 473 | 0.0 | 984 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205330 | sp|Q00257|1A12_CUCMA | 75.884 | 481 | 102 | 4 | 1 | 473 | 1 | 475 | 0.0 | 768 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0012790 | Msa1205330 | 0.814590 | 1.425709e-51 | -8.615850e-47 |
| Msa0624930 | Msa1205330 | 0.814183 | 1.754270e-51 | -8.615850e-47 |
| Msa0716700 | Msa1205330 | 0.805013 | 1.638803e-49 | -8.615850e-47 |
| Msa0152640 | Msa1205330 | 0.809549 | 1.791447e-50 | -8.615850e-47 |
| Msa0210790 | Msa1205330 | 0.802407 | 5.692872e-49 | -8.615850e-47 |
| Msa0210850 | Msa1205330 | 0.814117 | 1.814228e-51 | -8.615850e-47 |
| Msa0984310 | Msa1205330 | 0.852094 | 5.783670e-61 | -8.615850e-47 |
| Msa1190610 | Msa1205330 | 0.804042 | 2.612363e-49 | -8.615850e-47 |
| Msa1205330 | Msa1297260 | 0.872074 | 4.204242e-67 | -8.615850e-47 |
| Msa1205330 | Msa1407670 | 0.818080 | 2.361898e-52 | -8.615850e-47 |
| Msa1205330 | Msa1449770 | 0.822134 | 2.787292e-53 | -8.615850e-47 |
| Msa0483820 | Msa1205330 | 0.884496 | 1.824836e-71 | -8.615850e-47 |
| Msa0529360 | Msa1205330 | 0.810467 | 1.136191e-50 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205330 | MtrunA17_Chr4g0054371 | 99.366 | 473 | 3 | 0 | 1 | 473 | 1 | 473 | 0.0 | 984 |
| Msa1205330 | MtrunA17_Chr5g0400831 | 83.195 | 482 | 68 | 5 | 1 | 471 | 1 | 480 | 0.0 | 832 |
| Msa1205330 | MtrunA17_Chr3g0135251 | 70.139 | 432 | 122 | 3 | 3 | 433 | 1 | 426 | 0.0 | 657 |
| Msa1205330 | MtrunA17_Chr6g0488041 | 60.325 | 431 | 161 | 4 | 4 | 434 | 14 | 434 | 0.0 | 555 |
| Msa1205330 | MtrunA17_Chr8g0387481 | 55.876 | 451 | 187 | 4 | 2 | 450 | 10 | 450 | 0.0 | 551 |
| Msa1205330 | MtrunA17_Chr8g0389311 | 58.124 | 437 | 165 | 5 | 4 | 439 | 12 | 431 | 0.0 | 534 |
| Msa1205330 | MtrunA17_Chr8g0389321 | 58.124 | 437 | 165 | 5 | 4 | 439 | 12 | 431 | 0.0 | 534 |
| Msa1205330 | MtrunA17_Chr8g0348351 | 53.759 | 439 | 189 | 3 | 2 | 438 | 9 | 435 | 0.0 | 520 |
| Msa1205330 | MtrunA17_Chr7g0248681 | 53.103 | 435 | 191 | 3 | 2 | 434 | 9 | 432 | 7.57e-178 | 507 |
| Msa1205330 | MtrunA17_Chr6g0475681 | 45.517 | 435 | 225 | 5 | 4 | 437 | 104 | 527 | 3.40e-146 | 428 |
| Msa1205330 | MtrunA17_Chr5g0398431 | 41.687 | 415 | 232 | 3 | 16 | 430 | 84 | 488 | 1.97e-125 | 374 |
| Msa1205330 | MtrunA17_Chr5g0412871 | 26.404 | 178 | 123 | 6 | 79 | 253 | 100 | 272 | 4.66e-14 | 74.3 |
| Msa1205330 | MtrunA17_Chr8g0345201 | 22.741 | 343 | 234 | 13 | 112 | 433 | 182 | 514 | 7.05e-14 | 73.9 |
| Msa1205330 | MtrunA17_Chr4g0004131 | 22.527 | 364 | 229 | 14 | 79 | 431 | 61 | 382 | 1.60e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1205330 | AT4G37770.1 | 71.698 | 477 | 123 | 4 | 1 | 473 | 1 | 469 | 0.0 | 714 |
| Msa1205330 | AT3G49700.1 | 74.153 | 472 | 109 | 4 | 1 | 466 | 1 | 465 | 0.0 | 711 |
| Msa1205330 | AT5G65800.1 | 73.517 | 472 | 112 | 5 | 1 | 466 | 1 | 465 | 0.0 | 704 |
| Msa1205330 | AT2G22810.1 | 69.023 | 481 | 134 | 3 | 1 | 473 | 1 | 474 | 0.0 | 690 |
| Msa1205330 | AT4G08040.1 | 66.450 | 462 | 145 | 3 | 3 | 463 | 1 | 453 | 0.0 | 650 |
| Msa1205330 | AT4G26200.1 | 58.333 | 432 | 171 | 3 | 4 | 434 | 18 | 441 | 0.0 | 533 |
| Msa1205330 | AT3G61510.1 | 54.147 | 434 | 187 | 3 | 2 | 435 | 9 | 430 | 0.0 | 519 |
| Msa1205330 | AT1G01480.1 | 51.380 | 471 | 213 | 4 | 3 | 464 | 11 | 474 | 4.76e-179 | 511 |
| Msa1205330 | AT4G11280.1 | 53.118 | 433 | 194 | 2 | 1 | 433 | 12 | 435 | 5.00e-177 | 506 |
| Msa1205330 | AT1G01480.2 | 51.467 | 375 | 166 | 4 | 99 | 464 | 1 | 368 | 6.10e-140 | 407 |
| Msa1205330 | AT5G51690.1 | 43.590 | 429 | 231 | 4 | 4 | 431 | 69 | 487 | 6.63e-139 | 409 |
| Msa1205330 | AT1G62960.1 | 42.227 | 431 | 231 | 8 | 4 | 431 | 132 | 547 | 1.07e-125 | 377 |
| Msa1205330 | AT5G51690.2 | 42.932 | 382 | 200 | 4 | 50 | 431 | 1 | 364 | 2.04e-120 | 357 |
| Msa1205330 | AT1G23310.2 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 1.29e-14 | 76.3 |
| Msa1205330 | AT1G23310.1 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 2.23e-14 | 75.5 |
| Msa1205330 | AT1G70580.4 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 6.32e-14 | 74.3 |
| Msa1205330 | AT1G70580.2 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 6.32e-14 | 74.3 |
| Msa1205330 | AT1G70580.3 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 6.32e-14 | 74.3 |
| Msa1205330 | AT1G70580.1 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 6.32e-14 | 74.3 |
| Msa1205330 | AT1G77670.1 | 24.267 | 375 | 237 | 16 | 71 | 431 | 92 | 433 | 6.11e-13 | 70.9 |
| Msa1205330 | AT2G24850.1 | 23.423 | 333 | 212 | 12 | 114 | 433 | 117 | 419 | 3.18e-11 | 65.9 |
| Msa1205330 | AT2G20610.1 | 23.056 | 360 | 228 | 14 | 88 | 433 | 111 | 435 | 9.42e-11 | 64.3 |
Find 90 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTACTCCTTTGACTTTA+AGG | 0.007055 | 8_1:-61509492 | None:intergenic |
| TCCATGACGCTGATGAAATT+TGG | 0.143831 | 8_1:-61509649 | None:intergenic |
| CGTCAGAACAAGCTTGTTTC+GGG | 0.214801 | 8_1:+61509949 | Msa1205330:CDS |
| ACAAATATTATCAGCGTCTT+TGG | 0.227556 | 8_1:-61509704 | None:intergenic |
| CAAGACTCTTCATACTTCTT+AGG | 0.254225 | 8_1:+61508737 | Msa1205330:CDS |
| GAGAGCAAGTTCACGGAATA+TGG | 0.287004 | 8_1:-61509025 | None:intergenic |
| GTTACTTACCCTGGATAATA+AGG | 0.296953 | 8_1:-61509231 | None:intergenic |
| ACCTGGCAAACCCAAGTCTT+TGG | 0.309354 | 8_1:-61509755 | None:intergenic |
| CAACACATTTGAAGCTGAAA+TGG | 0.312708 | 8_1:+61510053 | Msa1205330:CDS |
| ACGTCAGAACAAGCTTGTTT+CGG | 0.332943 | 8_1:+61509948 | Msa1205330:CDS |
| ACAAGCATTGGTAGATTTCA+TGG | 0.337094 | 8_1:+61509080 | Msa1205330:CDS |
| GCTTTCCAAGCAGCTAATTC+CGG | 0.349870 | 8_1:-61509983 | None:intergenic |
| CCCATTTGAATAATTCCTTT+AGG | 0.350296 | 8_1:-61508803 | None:intergenic |
| TTCGGTTACTTGAAAGTTGT+TGG | 0.352316 | 8_1:-61509428 | None:intergenic |
| CTTCCTACTCCTTATTATCC+AGG | 0.362035 | 8_1:+61509222 | Msa1205330:CDS |
| GAGTCCACTGGCAATGTTAA+TGG | 0.369447 | 8_1:+61510231 | Msa1205330:CDS |
| GAGGAATGCTTCTCCTTTCT+CGG | 0.379843 | 8_1:-61509199 | None:intergenic |
| TCCTAAAGGAATTATTCAAA+TGG | 0.384178 | 8_1:+61508802 | Msa1205330:CDS |
| TCCAAAGACTTGGGTTTGCC+AGG | 0.387995 | 8_1:+61509754 | Msa1205330:CDS |
| TTGGAGCTTGTGCAATGTAT+TGG | 0.402052 | 8_1:-61509409 | None:intergenic |
| GTGGTGCCTAGCGGGTTTGA+TGG | 0.413274 | 8_1:-61509523 | None:intergenic |
| TTGAAGCTGAAATGGAACTA+TGG | 0.421415 | 8_1:+61510061 | Msa1205330:CDS |
| CATTTCAGCTTCAAATGTGT+TGG | 0.425676 | 8_1:-61510052 | None:intergenic |
| GATTTCATGGCTGAAATTAG+AGG | 0.438990 | 8_1:+61509093 | Msa1205330:CDS |
| CTATAGTCTTTCCAAAGACT+TGG | 0.439881 | 8_1:+61509744 | Msa1205330:CDS |
| AGAGATCTTAAGTGGAGAAC+TGG | 0.441917 | 8_1:+61509373 | Msa1205330:CDS |
| TGCTTGTTGCAATGCTTGTT+CGG | 0.447826 | 8_1:-61509446 | None:intergenic |
| GCTAAGAATCCAGATGCATC+TGG | 0.449521 | 8_1:+61508982 | Msa1205330:CDS |
| TTGACATTGTGGTGCCTAGC+GGG | 0.450378 | 8_1:-61509531 | None:intergenic |
| GATTTGATAGAGATCTTAAG+TGG | 0.457172 | 8_1:+61509365 | Msa1205330:intron |
| AGCTGCTTGGAAAGCAATGC+AGG | 0.457790 | 8_1:+61509991 | Msa1205330:CDS |
| TACCTTCTTTCCGCCATGCT+TGG | 0.457804 | 8_1:+61509871 | Msa1205330:CDS |
| GGATTGTGAACATTATCGTA+TGG | 0.469336 | 8_1:-61508782 | None:intergenic |
| ACCAATGCTTGTTTGAATGC+AGG | 0.471558 | 8_1:-61509069 | None:intergenic |
| CAGGCATGCCATGGTAGTCT+TGG | 0.474331 | 8_1:-61509050 | None:intergenic |
| CAGCTTCAAATGTGTTGGAA+TGG | 0.474679 | 8_1:-61510047 | None:intergenic |
| CTTTGAAACTAGCAATGAAA+AGG | 0.480723 | 8_1:+61510190 | Msa1205330:CDS |
| GCCGAAGCTTGACATCTTCG+TGG | 0.488316 | 8_1:-61509827 | None:intergenic |
| GAGAAATTTACTCACTAAGT+GGG | 0.491942 | 8_1:+61510275 | Msa1205330:CDS |
| CCTAAAGGAATTATTCAAAT+GGG | 0.495148 | 8_1:+61508803 | Msa1205330:CDS |
| CTAAGAAGTATGAAGAGTCT+TGG | 0.495354 | 8_1:-61508736 | None:intergenic |
| GCTTTCGTTGTTGAGTCCAC+TGG | 0.495466 | 8_1:+61510219 | Msa1205330:CDS |
| ACTCTTCATACTTCTTAGGA+TGG | 0.496264 | 8_1:+61508741 | Msa1205330:CDS |
| AGAGAAATTTACTCACTAAG+TGG | 0.501044 | 8_1:+61510274 | Msa1205330:CDS |
| CACCAAGCATGGCGGAAAGA+AGG | 0.506326 | 8_1:-61509873 | None:intergenic |
| CCTTAAAGTCAAAGGAGTAA+TGG | 0.507013 | 8_1:+61509492 | Msa1205330:CDS |
| GATAATGTTCACAATCCTAA+AGG | 0.507661 | 8_1:+61508788 | Msa1205330:CDS |
| TCCAAATTTCATCAGCGTCA+TGG | 0.509292 | 8_1:+61509648 | Msa1205330:CDS |
| GATTGTGAACATTATCGTAT+GGG | 0.512439 | 8_1:-61508781 | None:intergenic |
| TGGTGCCTAGCGGGTTTGAT+GGG | 0.518811 | 8_1:-61509522 | None:intergenic |
| TAATTCACTCCTTGACATTG+TGG | 0.520906 | 8_1:-61509542 | None:intergenic |
| GCATCTGGATTCAAAAGAGA+TGG | 0.523681 | 8_1:+61508997 | Msa1205330:CDS |
| GCCTGCATTCAAACAAGCAT+TGG | 0.524558 | 8_1:+61509068 | Msa1205330:CDS |
| TATAGTCTTTCCAAAGACTT+GGG | 0.530946 | 8_1:+61509745 | Msa1205330:CDS |
| CTCTTCATACTTCTTAGGAT+GGG | 0.532693 | 8_1:+61508742 | Msa1205330:CDS |
| TTCCTACTCCTTATTATCCA+GGG | 0.533548 | 8_1:+61509223 | Msa1205330:CDS |
| GGTTTGCCAGGTTTCCGTGT+TGG | 0.539924 | 8_1:+61509766 | Msa1205330:CDS |
| GCCACGAAGATGTCAAGCTT+CGG | 0.543189 | 8_1:+61509826 | Msa1205330:CDS |
| ATGGCACCAACACGGAAACC+TGG | 0.544960 | 8_1:-61509772 | None:intergenic |
| CTTGGAAGAGAGCAAGTTCA+CGG | 0.552418 | 8_1:-61509032 | None:intergenic |
| TCTTGTCATTGTACAGAACC+AGG | 0.559141 | 8_1:+61510129 | Msa1205330:CDS |
| AAAAGCCGGAATTAGCTGCT+TGG | 0.561044 | 8_1:+61509978 | Msa1205330:CDS |
| GCGGTGAGAACTATGTGGTT+GGG | 0.564851 | 8_1:-61509135 | None:intergenic |
| GTGAAATGTTTAAACCAACT+TGG | 0.565975 | 8_1:-61510098 | None:intergenic |
| AAGAAAATAGTGTACCAAGT+TGG | 0.566563 | 8_1:+61510084 | Msa1205330:CDS |
| AAAGCAACTTGTAATAGTCA+TGG | 0.582182 | 8_1:+61508713 | Msa1205330:CDS |
| AAACGCAACCTTAAAGTCAA+AGG | 0.585930 | 8_1:+61509484 | Msa1205330:CDS |
| CATCTACTCCGAAAATGATA+CGG | 0.588804 | 8_1:+61509792 | Msa1205330:CDS |
| TGCGGTGAGAACTATGTGGT+TGG | 0.600293 | 8_1:-61509136 | None:intergenic |
| AAACACACACGAAACCAACC+TGG | 0.602737 | 8_1:-61510147 | None:intergenic |
| GTTTGAATGCAGGCATGCCA+TGG | 0.605648 | 8_1:-61509059 | None:intergenic |
| GTCATTGTACAGAACCAGGT+TGG | 0.607425 | 8_1:+61510133 | Msa1205330:CDS |
| AACCACATAGTTCTCACCGC+AGG | 0.611056 | 8_1:+61509138 | Msa1205330:CDS |
| CTGGATAATAAGGAGTAGGA+AGG | 0.613137 | 8_1:-61509221 | None:intergenic |
| GATAATAAGGAGTAGGAAGG+AGG | 0.616132 | 8_1:-61509218 | None:intergenic |
| CGGAGTAGATGGCACCAACA+CGG | 0.622408 | 8_1:-61509780 | None:intergenic |
| ATAAGCGACGAGATTTACTC+CGG | 0.625337 | 8_1:+61509610 | Msa1205330:CDS |
| TGATCAACGTGATCAACAAG+AGG | 0.629251 | 8_1:+61510317 | Msa1205330:CDS |
| GTTGGTTTAAACATTTCACC+TGG | 0.630672 | 8_1:+61510102 | Msa1205330:CDS |
| AACGTGATCAACAAGAGGAA+CGG | 0.630998 | 8_1:+61510322 | Msa1205330:CDS |
| TACCCTGGATAATAAGGAGT+AGG | 0.632955 | 8_1:-61509225 | None:intergenic |
| CGCTAGGCACCACAATGTCA+AGG | 0.634181 | 8_1:+61509533 | Msa1205330:CDS |
| AACACCATTAACATTGCCAG+TGG | 0.635347 | 8_1:-61510235 | None:intergenic |
| CTTGACATTGTGGTGCCTAG+CGG | 0.638500 | 8_1:-61509532 | None:intergenic |
| GACGCTGATGAAATTTGGAG+AGG | 0.641265 | 8_1:-61509644 | None:intergenic |
| ACAAACCCATCAAACCCGCT+AGG | 0.648673 | 8_1:+61509517 | Msa1205330:CDS |
| GCTCTCTTCCAAGACTACCA+TGG | 0.688190 | 8_1:+61509042 | Msa1205330:CDS |
| ATTTGCTGAAGTAGAACCTG+CGG | 0.695572 | 8_1:-61509154 | None:intergenic |
| GTACAATGACAAGATGAACC+AGG | 0.699733 | 8_1:-61510120 | None:intergenic |
| AACCTGCGGTGAGAACTATG+TGG | 0.788440 | 8_1:-61509140 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGTACAAATAAATTTTTA+AGG | - | chr8_1:61508902-61508921 | None:intergenic | 10.0% |
| !!! | TAAGTACAAATAAATTTTTA+AGG | - | chr8_1:61508902-61508921 | None:intergenic | 10.0% |
| !! | GCAAAAGAAAAAAAAAATAT+CGG | - | chr8_1:61508930-61508949 | None:intergenic | 15.0% |
| !! | GCAAAAGAAAAAAAAAATAT+CGG | - | chr8_1:61508930-61508949 | None:intergenic | 15.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | + | chr8_1:61508802-61508821 | Msa1205330:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | + | chr8_1:61508803-61508822 | Msa1205330:CDS | 25.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | + | chr8_1:61508802-61508821 | Msa1205330:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | + | chr8_1:61508803-61508822 | Msa1205330:CDS | 25.0% |
| AAAGCAACTTGTAATAGTCA+TGG | + | chr8_1:61508713-61508732 | Msa1205330:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | - | chr8_1:61508784-61508803 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | + | chr8_1:61508788-61508807 | Msa1205330:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | - | chr8_1:61508806-61508825 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | - | chr8_1:61509243-61509262 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | + | chr8_1:61509365-61509384 | Msa1205330:intron | 30.0% | |
| ACAAATATTATCAGCGTCTT+TGG | - | chr8_1:61509707-61509726 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | + | chr8_1:61509745-61509764 | Msa1205330:CDS | 30.0% | |
| ! | GTTTTCAGCTAAGTAGTTTT+TGG | - | chr8_1:61509911-61509930 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | + | chr8_1:61510005-61510024 | Msa1205330:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | + | chr8_1:61510016-61510035 | Msa1205330:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | + | chr8_1:61510084-61510103 | Msa1205330:CDS | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | - | chr8_1:61510101-61510120 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | + | chr8_1:61510190-61510209 | Msa1205330:CDS | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | + | chr8_1:61510274-61510293 | Msa1205330:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | + | chr8_1:61510275-61510294 | Msa1205330:CDS | 30.0% | |
| AAAGCAACTTGTAATAGTCA+TGG | + | chr8_1:61508713-61508732 | Msa1205330:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | - | chr8_1:61508784-61508803 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | + | chr8_1:61508788-61508807 | Msa1205330:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | - | chr8_1:61508806-61508825 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | - | chr8_1:61509243-61509262 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | + | chr8_1:61509365-61509384 | Msa1205330:intron | 30.0% | |
| ACAAATATTATCAGCGTCTT+TGG | - | chr8_1:61509707-61509726 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | + | chr8_1:61509745-61509764 | Msa1205330:CDS | 30.0% | |
| ! | GTTTTCAGCTAAGTAGTTTT+TGG | - | chr8_1:61509911-61509930 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | + | chr8_1:61510005-61510024 | Msa1205330:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | + | chr8_1:61510016-61510035 | Msa1205330:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | + | chr8_1:61510084-61510103 | Msa1205330:CDS | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | - | chr8_1:61510101-61510120 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | + | chr8_1:61510190-61510209 | Msa1205330:CDS | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | + | chr8_1:61510274-61510293 | Msa1205330:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | + | chr8_1:61510275-61510294 | Msa1205330:CDS | 30.0% | |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | - | chr8_1:61508739-61508758 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | + | chr8_1:61508737-61508756 | Msa1205330:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | + | chr8_1:61508741-61508760 | Msa1205330:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | + | chr8_1:61508742-61508761 | Msa1205330:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | - | chr8_1:61508785-61508804 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | + | chr8_1:61508956-61508975 | Msa1205330:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | + | chr8_1:61509080-61509099 | Msa1205330:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | + | chr8_1:61509093-61509112 | Msa1205330:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | + | chr8_1:61509223-61509242 | Msa1205330:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | - | chr8_1:61509234-61509253 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | - | chr8_1:61509431-61509450 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | + | chr8_1:61509484-61509503 | Msa1205330:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | - | chr8_1:61509495-61509514 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | + | chr8_1:61509492-61509511 | Msa1205330:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | - | chr8_1:61509545-61509564 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | + | chr8_1:61509744-61509763 | Msa1205330:CDS | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | + | chr8_1:61509792-61509811 | Msa1205330:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | - | chr8_1:61509803-61509822 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | - | chr8_1:61509887-61509906 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | + | chr8_1:61510004-61510023 | Msa1205330:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | - | chr8_1:61510055-61510074 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | + | chr8_1:61510053-61510072 | Msa1205330:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | + | chr8_1:61510061-61510080 | Msa1205330:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | + | chr8_1:61510102-61510121 | Msa1205330:CDS | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | + | chr8_1:61510283-61510302 | Msa1205330:CDS | 35.0% |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | - | chr8_1:61508739-61508758 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | + | chr8_1:61508737-61508756 | Msa1205330:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | + | chr8_1:61508741-61508760 | Msa1205330:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | + | chr8_1:61508742-61508761 | Msa1205330:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | - | chr8_1:61508785-61508804 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | + | chr8_1:61508956-61508975 | Msa1205330:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | + | chr8_1:61509080-61509099 | Msa1205330:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | + | chr8_1:61509093-61509112 | Msa1205330:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | + | chr8_1:61509223-61509242 | Msa1205330:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | - | chr8_1:61509234-61509253 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | - | chr8_1:61509431-61509450 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | + | chr8_1:61509484-61509503 | Msa1205330:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | - | chr8_1:61509495-61509514 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | + | chr8_1:61509492-61509511 | Msa1205330:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | - | chr8_1:61509545-61509564 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | + | chr8_1:61509744-61509763 | Msa1205330:CDS | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | + | chr8_1:61509792-61509811 | Msa1205330:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | - | chr8_1:61509803-61509822 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | - | chr8_1:61509887-61509906 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | + | chr8_1:61510004-61510023 | Msa1205330:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | - | chr8_1:61510055-61510074 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | + | chr8_1:61510053-61510072 | Msa1205330:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | + | chr8_1:61510061-61510080 | Msa1205330:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | + | chr8_1:61510102-61510121 | Msa1205330:CDS | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | + | chr8_1:61510283-61510302 | Msa1205330:CDS | 35.0% |
| ! | CTTTTGAATCCAGATGCATC+TGG | - | chr8_1:61508994-61509013 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | + | chr8_1:61508997-61509016 | Msa1205330:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+AGG | - | chr8_1:61509072-61509091 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | - | chr8_1:61509157-61509176 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | + | chr8_1:61509186-61509205 | Msa1205330:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | - | chr8_1:61509221-61509240 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | - | chr8_1:61509224-61509243 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | + | chr8_1:61509222-61509241 | Msa1205330:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | - | chr8_1:61509228-61509247 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | + | chr8_1:61509373-61509392 | Msa1205330:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | - | chr8_1:61509412-61509431 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | - | chr8_1:61509449-61509468 | None:intergenic | 40.0% |
| ATAAGCGACGAGATTTACTC+CGG | + | chr8_1:61509610-61509629 | Msa1205330:CDS | 40.0% | |
| TCCAAATTTCATCAGCGTCA+TGG | + | chr8_1:61509648-61509667 | Msa1205330:CDS | 40.0% | |
| TCCATGACGCTGATGAAATT+TGG | - | chr8_1:61509652-61509671 | None:intergenic | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | - | chr8_1:61509794-61509813 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | - | chr8_1:61509884-61509903 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | + | chr8_1:61509948-61509967 | Msa1205330:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | + | chr8_1:61509964-61509983 | Msa1205330:CDS | 40.0% |
| CAGCTTCAAATGTGTTGGAA+TGG | - | chr8_1:61510050-61510069 | None:intergenic | 40.0% | |
| GTACAATGACAAGATGAACC+AGG | - | chr8_1:61510123-61510142 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | + | chr8_1:61510129-61510148 | Msa1205330:CDS | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | - | chr8_1:61510238-61510257 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | + | chr8_1:61510317-61510336 | Msa1205330:CDS | 40.0% | |
| AACGTGATCAACAAGAGGAA+CGG | + | chr8_1:61510322-61510341 | Msa1205330:CDS | 40.0% | |
| ! | CTTTTGAATCCAGATGCATC+TGG | - | chr8_1:61508994-61509013 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | + | chr8_1:61508997-61509016 | Msa1205330:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+AGG | - | chr8_1:61509072-61509091 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | - | chr8_1:61509157-61509176 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | + | chr8_1:61509186-61509205 | Msa1205330:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | - | chr8_1:61509221-61509240 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | - | chr8_1:61509224-61509243 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | + | chr8_1:61509222-61509241 | Msa1205330:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | - | chr8_1:61509228-61509247 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | + | chr8_1:61509373-61509392 | Msa1205330:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | - | chr8_1:61509412-61509431 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | - | chr8_1:61509449-61509468 | None:intergenic | 40.0% |
| ATAAGCGACGAGATTTACTC+CGG | + | chr8_1:61509610-61509629 | Msa1205330:CDS | 40.0% | |
| TCCAAATTTCATCAGCGTCA+TGG | + | chr8_1:61509648-61509667 | Msa1205330:CDS | 40.0% | |
| TCCATGACGCTGATGAAATT+TGG | - | chr8_1:61509652-61509671 | None:intergenic | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | - | chr8_1:61509794-61509813 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | - | chr8_1:61509884-61509903 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | + | chr8_1:61509948-61509967 | Msa1205330:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | + | chr8_1:61509964-61509983 | Msa1205330:CDS | 40.0% |
| CAGCTTCAAATGTGTTGGAA+TGG | - | chr8_1:61510050-61510069 | None:intergenic | 40.0% | |
| GTACAATGACAAGATGAACC+AGG | - | chr8_1:61510123-61510142 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | + | chr8_1:61510129-61510148 | Msa1205330:CDS | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | - | chr8_1:61510238-61510257 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | + | chr8_1:61510317-61510336 | Msa1205330:CDS | 40.0% | |
| AACGTGATCAACAAGAGGAA+CGG | + | chr8_1:61510322-61510341 | Msa1205330:CDS | 40.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | + | chr8_1:61508948-61508967 | Msa1205330:intron | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | + | chr8_1:61508982-61509001 | Msa1205330:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | - | chr8_1:61509028-61509047 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | - | chr8_1:61509035-61509054 | None:intergenic | 45.0% | |
| GCCTGCATTCAAACAAGCAT+TGG | + | chr8_1:61509068-61509087 | Msa1205330:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | - | chr8_1:61509202-61509221 | None:intergenic | 45.0% | |
| ! | GGTTGCGTTTTTGTGCATCT+TGG | - | chr8_1:61509474-61509493 | None:intergenic | 45.0% |
| TGGAGAGGAAAAAACAGTGC+CGG | - | chr8_1:61509632-61509651 | None:intergenic | 45.0% | |
| GACGCTGATGAAATTTGGAG+AGG | - | chr8_1:61509647-61509666 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | + | chr8_1:61509949-61509968 | Msa1205330:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | + | chr8_1:61509978-61509997 | Msa1205330:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | - | chr8_1:61509986-61510005 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | + | chr8_1:61510133-61510152 | Msa1205330:CDS | 45.0% | |
| AAACACACACGAAACCAACC+TGG | - | chr8_1:61510150-61510169 | None:intergenic | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | + | chr8_1:61510231-61510250 | Msa1205330:CDS | 45.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | + | chr8_1:61508948-61508967 | Msa1205330:intron | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | + | chr8_1:61508982-61509001 | Msa1205330:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | - | chr8_1:61509028-61509047 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | - | chr8_1:61509035-61509054 | None:intergenic | 45.0% | |
| GCCTGCATTCAAACAAGCAT+TGG | + | chr8_1:61509068-61509087 | Msa1205330:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | - | chr8_1:61509202-61509221 | None:intergenic | 45.0% | |
| ! | GGTTGCGTTTTTGTGCATCT+TGG | - | chr8_1:61509474-61509493 | None:intergenic | 45.0% |
| TGGAGAGGAAAAAACAGTGC+CGG | - | chr8_1:61509632-61509651 | None:intergenic | 45.0% | |
| GACGCTGATGAAATTTGGAG+AGG | - | chr8_1:61509647-61509666 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | + | chr8_1:61509949-61509968 | Msa1205330:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | + | chr8_1:61509978-61509997 | Msa1205330:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | - | chr8_1:61509986-61510005 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | + | chr8_1:61510133-61510152 | Msa1205330:CDS | 45.0% | |
| AAACACACACGAAACCAACC+TGG | - | chr8_1:61510150-61510169 | None:intergenic | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | + | chr8_1:61510231-61510250 | Msa1205330:CDS | 45.0% | |
| !!! | TTGATATTTTTTTTTTTTTT+TGG | + | chr8_1:61509333-61509352 | Msa1205330:intron | 5.0% |
| !!! | TTGATATTTTTTTTTTTTTT+TGG | + | chr8_1:61509333-61509352 | Msa1205330:intron | 5.0% |
| GCTCTCTTCCAAGACTACCA+TGG | + | chr8_1:61509042-61509061 | Msa1205330:CDS | 50.0% | |
| GTTTGAATGCAGGCATGCCA+TGG | - | chr8_1:61509062-61509081 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | - | chr8_1:61509138-61509157 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | - | chr8_1:61509139-61509158 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | + | chr8_1:61509138-61509157 | Msa1205330:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | - | chr8_1:61509143-61509162 | None:intergenic | 50.0% | |
| ACAAACCCATCAAACCCGCT+AGG | + | chr8_1:61509517-61509536 | Msa1205330:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | - | chr8_1:61509534-61509553 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | - | chr8_1:61509535-61509554 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | + | chr8_1:61509754-61509773 | Msa1205330:CDS | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | - | chr8_1:61509758-61509777 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | + | chr8_1:61509826-61509845 | Msa1205330:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | + | chr8_1:61509871-61509890 | Msa1205330:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | + | chr8_1:61509991-61510010 | Msa1205330:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | + | chr8_1:61510219-61510238 | Msa1205330:CDS | 50.0% | |
| GCTCTCTTCCAAGACTACCA+TGG | + | chr8_1:61509042-61509061 | Msa1205330:CDS | 50.0% | |
| GTTTGAATGCAGGCATGCCA+TGG | - | chr8_1:61509062-61509081 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | - | chr8_1:61509138-61509157 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | - | chr8_1:61509139-61509158 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | + | chr8_1:61509138-61509157 | Msa1205330:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | - | chr8_1:61509143-61509162 | None:intergenic | 50.0% | |
| ACAAACCCATCAAACCCGCT+AGG | + | chr8_1:61509517-61509536 | Msa1205330:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | - | chr8_1:61509534-61509553 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | - | chr8_1:61509535-61509554 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | + | chr8_1:61509754-61509773 | Msa1205330:CDS | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | - | chr8_1:61509758-61509777 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | + | chr8_1:61509826-61509845 | Msa1205330:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | + | chr8_1:61509871-61509890 | Msa1205330:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | + | chr8_1:61509991-61510010 | Msa1205330:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | + | chr8_1:61510219-61510238 | Msa1205330:CDS | 50.0% | |
| CAGGCATGCCATGGTAGTCT+TGG | - | chr8_1:61509053-61509072 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | - | chr8_1:61509525-61509544 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | + | chr8_1:61509533-61509552 | Msa1205330:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | + | chr8_1:61509766-61509785 | Msa1205330:CDS | 55.0% | |
| ATGGCACCAACACGGAAACC+TGG | - | chr8_1:61509775-61509794 | None:intergenic | 55.0% | |
| CGGAGTAGATGGCACCAACA+CGG | - | chr8_1:61509783-61509802 | None:intergenic | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | - | chr8_1:61509830-61509849 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | - | chr8_1:61509876-61509895 | None:intergenic | 55.0% |
| CAGGCATGCCATGGTAGTCT+TGG | - | chr8_1:61509053-61509072 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | - | chr8_1:61509525-61509544 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | + | chr8_1:61509533-61509552 | Msa1205330:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | + | chr8_1:61509766-61509785 | Msa1205330:CDS | 55.0% | |
| ATGGCACCAACACGGAAACC+TGG | - | chr8_1:61509775-61509794 | None:intergenic | 55.0% | |
| CGGAGTAGATGGCACCAACA+CGG | - | chr8_1:61509783-61509802 | None:intergenic | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | - | chr8_1:61509830-61509849 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | - | chr8_1:61509876-61509895 | None:intergenic | 55.0% |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | - | chr8_1:61509526-61509545 | None:intergenic | 60.0% |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | - | chr8_1:61509526-61509545 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8_1 | gene | 61508695 | 61510347 | 61508695 | ID=Msa1205330;Name=Msa1205330 |
| chr8_1 | mRNA | 61508695 | 61510347 | 61508695 | ID=Msa1205330-mRNA-1;Parent=Msa1205330;Name=Msa1205330-mRNA-1;_AED=0.05;_eAED=0.05;_QI=0|0|0|1|1|1|3|0|473 |
| chr8_1 | exon | 61508695 | 61508841 | 61508695 | ID=Msa1205330-mRNA-1:exon:19971;Parent=Msa1205330-mRNA-1 |
| chr8_1 | exon | 61508952 | 61509244 | 61508952 | ID=Msa1205330-mRNA-1:exon:19972;Parent=Msa1205330-mRNA-1 |
| chr8_1 | exon | 61509366 | 61510347 | 61509366 | ID=Msa1205330-mRNA-1:exon:19973;Parent=Msa1205330-mRNA-1 |
| chr8_1 | CDS | 61508695 | 61508841 | 61508695 | ID=Msa1205330-mRNA-1:cds;Parent=Msa1205330-mRNA-1 |
| chr8_1 | CDS | 61508952 | 61509244 | 61508952 | ID=Msa1205330-mRNA-1:cds;Parent=Msa1205330-mRNA-1 |
| chr8_1 | CDS | 61509366 | 61510347 | 61509366 | ID=Msa1205330-mRNA-1:cds;Parent=Msa1205330-mRNA-1 |
| Gene Sequence |
| Protein sequence |
