Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483820 | XP_013457509.1 | 99.577 | 473 | 2 | 0 | 1 | 473 | 1 | 473 | 0.0 | 985 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483820 | sp|Q00257|1A12_CUCMA | 75.676 | 481 | 103 | 4 | 1 | 473 | 1 | 475 | 0.0 | 766 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483820 | A0A072V097 | 99.577 | 473 | 2 | 0 | 1 | 473 | 1 | 473 | 0.0 | 985 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0048950 | Msa0483820 | 0.800881 | 1.170328e-48 | -8.615850e-47 |
| Msa0147680 | Msa0483820 | 0.813123 | 3.000928e-51 | -8.615850e-47 |
| Msa0210850 | Msa0483820 | 0.805144 | 1.538561e-49 | -8.615850e-47 |
| Msa0483820 | Msa0984310 | 0.914844 | 1.189152e-84 | -8.615850e-47 |
| Msa0483820 | Msa1205330 | 0.884496 | 1.824836e-71 | -8.615850e-47 |
| Msa0483820 | Msa1297260 | 0.927145 | 1.766977e-91 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483820 | MtrunA17_Chr4g0054371 | 99.577 | 473 | 2 | 0 | 1 | 473 | 1 | 473 | 0.0 | 985 |
| Msa0483820 | MtrunA17_Chr5g0400831 | 83.402 | 482 | 67 | 5 | 1 | 471 | 1 | 480 | 0.0 | 835 |
| Msa0483820 | MtrunA17_Chr3g0135251 | 70.139 | 432 | 122 | 3 | 3 | 433 | 1 | 426 | 0.0 | 657 |
| Msa0483820 | MtrunA17_Chr6g0488041 | 60.325 | 431 | 161 | 4 | 4 | 434 | 14 | 434 | 0.0 | 554 |
| Msa0483820 | MtrunA17_Chr8g0387481 | 55.876 | 451 | 187 | 4 | 2 | 450 | 10 | 450 | 0.0 | 552 |
| Msa0483820 | MtrunA17_Chr8g0389311 | 58.352 | 437 | 164 | 5 | 4 | 439 | 12 | 431 | 0.0 | 535 |
| Msa0483820 | MtrunA17_Chr8g0389321 | 58.352 | 437 | 164 | 5 | 4 | 439 | 12 | 431 | 0.0 | 535 |
| Msa0483820 | MtrunA17_Chr8g0348351 | 53.759 | 439 | 189 | 3 | 2 | 438 | 9 | 435 | 0.0 | 520 |
| Msa0483820 | MtrunA17_Chr7g0248681 | 53.103 | 435 | 191 | 3 | 2 | 434 | 9 | 432 | 5.28e-178 | 507 |
| Msa0483820 | MtrunA17_Chr6g0475681 | 45.517 | 435 | 225 | 5 | 4 | 437 | 104 | 527 | 1.21e-146 | 429 |
| Msa0483820 | MtrunA17_Chr5g0398431 | 41.687 | 415 | 232 | 3 | 16 | 430 | 84 | 488 | 7.37e-126 | 375 |
| Msa0483820 | MtrunA17_Chr5g0412871 | 26.966 | 178 | 122 | 6 | 79 | 253 | 100 | 272 | 1.93e-14 | 75.5 |
| Msa0483820 | MtrunA17_Chr8g0345201 | 22.449 | 343 | 235 | 13 | 112 | 433 | 182 | 514 | 3.12e-13 | 71.6 |
| Msa0483820 | MtrunA17_Chr4g0004131 | 22.802 | 364 | 228 | 14 | 79 | 431 | 61 | 382 | 5.74e-13 | 70.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa0483820 | AT4G37770.1 | 71.698 | 477 | 123 | 4 | 1 | 473 | 1 | 469 | 0.0 | 715 |
| Msa0483820 | AT3G49700.1 | 74.153 | 472 | 109 | 4 | 1 | 466 | 1 | 465 | 0.0 | 712 |
| Msa0483820 | AT5G65800.1 | 73.517 | 472 | 112 | 5 | 1 | 466 | 1 | 465 | 0.0 | 704 |
| Msa0483820 | AT2G22810.1 | 69.023 | 481 | 134 | 3 | 1 | 473 | 1 | 474 | 0.0 | 691 |
| Msa0483820 | AT4G08040.1 | 66.450 | 462 | 145 | 3 | 3 | 463 | 1 | 453 | 0.0 | 651 |
| Msa0483820 | AT4G26200.1 | 58.333 | 432 | 171 | 3 | 4 | 434 | 18 | 441 | 0.0 | 534 |
| Msa0483820 | AT3G61510.1 | 54.147 | 434 | 187 | 3 | 2 | 435 | 9 | 430 | 0.0 | 520 |
| Msa0483820 | AT1G01480.1 | 51.380 | 471 | 213 | 4 | 3 | 464 | 11 | 474 | 1.78e-179 | 512 |
| Msa0483820 | AT4G11280.1 | 53.118 | 433 | 194 | 2 | 1 | 433 | 12 | 435 | 1.01e-176 | 505 |
| Msa0483820 | AT1G01480.2 | 51.467 | 375 | 166 | 4 | 99 | 464 | 1 | 368 | 2.70e-140 | 408 |
| Msa0483820 | AT5G51690.1 | 43.590 | 429 | 231 | 4 | 4 | 431 | 69 | 487 | 3.17e-139 | 409 |
| Msa0483820 | AT1G62960.1 | 42.227 | 431 | 231 | 8 | 4 | 431 | 132 | 547 | 4.11e-126 | 378 |
| Msa0483820 | AT5G51690.2 | 42.932 | 382 | 200 | 4 | 50 | 431 | 1 | 364 | 9.64e-121 | 358 |
| Msa0483820 | AT1G23310.2 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 7.20e-15 | 77.0 |
| Msa0483820 | AT1G23310.1 | 23.868 | 243 | 167 | 8 | 24 | 253 | 35 | 272 | 1.21e-14 | 76.6 |
| Msa0483820 | AT1G70580.4 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.45e-14 | 75.1 |
| Msa0483820 | AT1G70580.2 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.45e-14 | 75.1 |
| Msa0483820 | AT1G70580.3 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.45e-14 | 75.1 |
| Msa0483820 | AT1G70580.1 | 23.457 | 243 | 168 | 8 | 24 | 253 | 35 | 272 | 3.45e-14 | 75.1 |
| Msa0483820 | AT2G22250.1 | 22.222 | 270 | 182 | 7 | 105 | 369 | 106 | 352 | 4.56e-13 | 71.2 |
| Msa0483820 | AT1G77670.1 | 24.267 | 375 | 237 | 16 | 71 | 431 | 92 | 433 | 1.08e-12 | 70.1 |
| Msa0483820 | AT2G24850.1 | 23.724 | 333 | 211 | 12 | 114 | 433 | 117 | 419 | 1.07e-11 | 67.0 |
| Msa0483820 | AT2G20610.1 | 23.333 | 360 | 227 | 14 | 88 | 433 | 111 | 435 | 2.96e-11 | 65.9 |
| Msa0483820 | AT4G23600.1 | 23.118 | 372 | 244 | 13 | 87 | 444 | 78 | 421 | 4.12e-11 | 65.1 |
Find 91 sgRNAs with CRISPR-Local
Find 220 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTACTCCTTTGACTTTA+AGG | 0.007055 | 3_4:-598531 | None:intergenic |
| TCCATGACGCTGATGAAATT+TGG | 0.143831 | 3_4:-598688 | None:intergenic |
| CGTCAGAACAAGCTTGTTTC+GGG | 0.214801 | 3_4:+598988 | Msa0483820:CDS |
| ACAAATATTATCAGCGTCTT+TGG | 0.227556 | 3_4:-598743 | None:intergenic |
| CAAGACTCTTCATACTTCTT+AGG | 0.254225 | 3_4:+597790 | Msa0483820:CDS |
| GAGAGCAAGTTCACGGAATA+TGG | 0.287004 | 3_4:-598078 | None:intergenic |
| GTTACTTACCCTGGATAATA+AGG | 0.296953 | 3_4:-598284 | None:intergenic |
| ACCTGGCAAACCCAAGTCTT+TGG | 0.309354 | 3_4:-598794 | None:intergenic |
| CAACACATTTGAAGCTGAAA+TGG | 0.312708 | 3_4:+599092 | Msa0483820:CDS |
| ACGTCAGAACAAGCTTGTTT+CGG | 0.332943 | 3_4:+598987 | Msa0483820:CDS |
| ACAAGCATTGGTAGATTTCA+TGG | 0.337094 | 3_4:+598133 | Msa0483820:CDS |
| GCTTTCCAAGCAGCTAATTC+CGG | 0.349870 | 3_4:-599022 | None:intergenic |
| CCCATTTGAATAATTCCTTT+AGG | 0.350296 | 3_4:-597856 | None:intergenic |
| TTCGGTTACTTGAAAGTTGT+TGG | 0.352316 | 3_4:-598467 | None:intergenic |
| CTTCCTACTCCTTATTATCC+AGG | 0.362035 | 3_4:+598275 | Msa0483820:CDS |
| GAGTCCACTGGCAATGTTAA+TGG | 0.369447 | 3_4:+599270 | Msa0483820:CDS |
| GAGGAATGCTTCTCCTTTCT+CGG | 0.379843 | 3_4:-598252 | None:intergenic |
| TCCTAAAGGAATTATTCAAA+TGG | 0.384178 | 3_4:+597855 | Msa0483820:CDS |
| TCCAAAGACTTGGGTTTGCC+AGG | 0.387995 | 3_4:+598793 | Msa0483820:CDS |
| TTGGAGCTTGTGCAATGTAT+TGG | 0.402052 | 3_4:-598448 | None:intergenic |
| GTGGTGCCTAGCGGGTTTGA+TGG | 0.413274 | 3_4:-598562 | None:intergenic |
| TTGAAGCTGAAATGGAACTA+TGG | 0.421415 | 3_4:+599100 | Msa0483820:CDS |
| CATTTCAGCTTCAAATGTGT+TGG | 0.425676 | 3_4:-599091 | None:intergenic |
| GATTTCATGGCTGAAATTAG+AGG | 0.438990 | 3_4:+598146 | Msa0483820:CDS |
| CTATAGTCTTTCCAAAGACT+TGG | 0.439881 | 3_4:+598783 | Msa0483820:CDS |
| AGAGATCTTAAGTGGAGAAC+TGG | 0.441917 | 3_4:+598412 | Msa0483820:CDS |
| TGCTTGTTGCAATGCTTGTT+CGG | 0.447826 | 3_4:-598485 | None:intergenic |
| GCTAAGAATCCAGATGCATC+TGG | 0.449521 | 3_4:+598035 | Msa0483820:CDS |
| TTGACATTGTGGTGCCTAGC+GGG | 0.450378 | 3_4:-598570 | None:intergenic |
| GATTTGATAGAGATCTTAAG+TGG | 0.457172 | 3_4:+598404 | Msa0483820:intron |
| AGCTGCTTGGAAAGCAATGC+AGG | 0.457790 | 3_4:+599030 | Msa0483820:CDS |
| TACCTTCTTTCCGCCATGCT+TGG | 0.457804 | 3_4:+598910 | Msa0483820:CDS |
| ACCAATGCTTGTTTGAATGC+TGG | 0.468828 | 3_4:-598122 | None:intergenic |
| GGATTGTGAACATTATCGTA+TGG | 0.469336 | 3_4:-597835 | None:intergenic |
| CAGCTTCAAATGTGTTGGAA+TGG | 0.474679 | 3_4:-599086 | None:intergenic |
| GGTTTGCCAGGTTTCCGTGT+TGG | 0.478336 | 3_4:+598805 | Msa0483820:CDS |
| CTTTGAAACTAGCAATGAAA+AGG | 0.480723 | 3_4:+599229 | Msa0483820:CDS |
| GCCGAAGCTTGACATCTTCG+TGG | 0.488316 | 3_4:-598866 | None:intergenic |
| GAGAAATTTACTCACTAAGT+GGG | 0.491942 | 3_4:+599314 | Msa0483820:CDS |
| CCTAAAGGAATTATTCAAAT+GGG | 0.495148 | 3_4:+597856 | Msa0483820:CDS |
| CTAAGAAGTATGAAGAGTCT+TGG | 0.495354 | 3_4:-597789 | None:intergenic |
| GCTTTCGTTGTTGAGTCCAC+TGG | 0.495466 | 3_4:+599258 | Msa0483820:CDS |
| ACTCTTCATACTTCTTAGGA+TGG | 0.496264 | 3_4:+597794 | Msa0483820:CDS |
| AGAGAAATTTACTCACTAAG+TGG | 0.501044 | 3_4:+599313 | Msa0483820:CDS |
| CACCAAGCATGGCGGAAAGA+AGG | 0.506326 | 3_4:-598912 | None:intergenic |
| CCTTAAAGTCAAAGGAGTAA+TGG | 0.507013 | 3_4:+598531 | Msa0483820:CDS |
| GATAATGTTCACAATCCTAA+AGG | 0.507661 | 3_4:+597841 | Msa0483820:CDS |
| TCCAAATTTCATCAGCGTCA+TGG | 0.509292 | 3_4:+598687 | Msa0483820:CDS |
| GATTGTGAACATTATCGTAT+GGG | 0.512439 | 3_4:-597834 | None:intergenic |
| CTGGCATGCCATGGTAGTCT+TGG | 0.514145 | 3_4:-598103 | None:intergenic |
| TGGTGCCTAGCGGGTTTGAT+GGG | 0.518811 | 3_4:-598561 | None:intergenic |
| TAATTCACTCCTTGACATTG+TGG | 0.520906 | 3_4:-598581 | None:intergenic |
| GCATCTGGATTCAAAAGAGA+TGG | 0.523681 | 3_4:+598050 | Msa0483820:CDS |
| TATAGTCTTTCCAAAGACTT+GGG | 0.530946 | 3_4:+598784 | Msa0483820:CDS |
| CTCTTCATACTTCTTAGGAT+GGG | 0.532693 | 3_4:+597795 | Msa0483820:CDS |
| TTCCTACTCCTTATTATCCA+GGG | 0.533548 | 3_4:+598276 | Msa0483820:CDS |
| GCCAGCATTCAAACAAGCAT+TGG | 0.538139 | 3_4:+598121 | Msa0483820:CDS |
| GCCACGAAGATGTCAAGCTT+CGG | 0.543189 | 3_4:+598865 | Msa0483820:CDS |
| ATGGCGCCAACACGGAAACC+TGG | 0.544960 | 3_4:-598811 | None:intergenic |
| CGGAGTAGATGGCGCCAACA+CGG | 0.550123 | 3_4:-598819 | None:intergenic |
| CTTGGAAGAGAGCAAGTTCA+CGG | 0.552418 | 3_4:-598085 | None:intergenic |
| GTTTGAATGCTGGCATGCCA+TGG | 0.557856 | 3_4:-598112 | None:intergenic |
| TCTTGTCATTGTACAGAACC+AGG | 0.559141 | 3_4:+599168 | Msa0483820:CDS |
| AAAAGCCGGAATTAGCTGCT+TGG | 0.561044 | 3_4:+599017 | Msa0483820:CDS |
| GCGGTGAGAACTATGTGGTT+GGG | 0.564851 | 3_4:-598188 | None:intergenic |
| GTGAAATGTTTAAACCAACT+TGG | 0.565975 | 3_4:-599137 | None:intergenic |
| AAGAAAATAGTGTACCAAGT+TGG | 0.566563 | 3_4:+599123 | Msa0483820:CDS |
| AAAGCAACTTGTAATAGTCA+TGG | 0.582182 | 3_4:+597766 | Msa0483820:CDS |
| AAACGCAACCTTAAAGTCAA+AGG | 0.585930 | 3_4:+598523 | Msa0483820:CDS |
| TGCGGTGAGAACTATGTGGT+TGG | 0.600293 | 3_4:-598189 | None:intergenic |
| AAACACACACGAAACCAACC+TGG | 0.602737 | 3_4:-599186 | None:intergenic |
| CATCTACTCCGAAAATGATA+CGG | 0.603585 | 3_4:+598831 | Msa0483820:CDS |
| GTCATTGTACAGAACCAGGT+TGG | 0.607425 | 3_4:+599172 | Msa0483820:CDS |
| AACCACATAGTTCTCACCGC+AGG | 0.611056 | 3_4:+598191 | Msa0483820:CDS |
| CTGGATAATAAGGAGTAGGA+AGG | 0.613137 | 3_4:-598274 | None:intergenic |
| GATAATAAGGAGTAGGAAGG+AGG | 0.616132 | 3_4:-598271 | None:intergenic |
| ATAAGCGACGAGATTTACTC+CGG | 0.625337 | 3_4:+598649 | Msa0483820:CDS |
| TGATCAACGTGATCAACAAG+AGG | 0.629251 | 3_4:+599356 | Msa0483820:CDS |
| GTTGGTTTAAACATTTCACC+TGG | 0.630672 | 3_4:+599141 | Msa0483820:CDS |
| AACGTGATCAACAAGAGGAA+CGG | 0.630998 | 3_4:+599361 | Msa0483820:CDS |
| TACCCTGGATAATAAGGAGT+AGG | 0.632955 | 3_4:-598278 | None:intergenic |
| CGCTAGGCACCACAATGTCA+AGG | 0.634181 | 3_4:+598572 | Msa0483820:CDS |
| AACACCATTAACATTGCCAG+TGG | 0.635347 | 3_4:-599274 | None:intergenic |
| CTTGACATTGTGGTGCCTAG+CGG | 0.638500 | 3_4:-598571 | None:intergenic |
| GACGCTGATGAAATTTGGAG+AGG | 0.641265 | 3_4:-598683 | None:intergenic |
| ACAAACCCATCAAACCCGCT+AGG | 0.648673 | 3_4:+598556 | Msa0483820:CDS |
| GCTCTCTTCCAAGACTACCA+TGG | 0.688190 | 3_4:+598095 | Msa0483820:CDS |
| ATTTGCTGAAGTAGAACCTG+CGG | 0.695572 | 3_4:-598207 | None:intergenic |
| GTACAATGACAAGATGAACC+AGG | 0.699733 | 3_4:-599159 | None:intergenic |
| ATTGCAACAAGCATACCAAG+AGG | 0.713636 | 3_4:+598495 | Msa0483820:CDS |
| AACCTGCGGTGAGAACTATG+TGG | 0.788440 | 3_4:-598193 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAAGTACAAATAAATTTTTA+AGG | - | chr3_4:597955-597974 | None:intergenic | 10.0% |
| !!! | TAAGTACAAATAAATTTTTA+AGG | - | chr3_4:597955-597974 | None:intergenic | 10.0% |
| !! | GCAAAAGAAAAAAAAAATAT+TGG | - | chr3_4:597983-598002 | None:intergenic | 15.0% |
| !! | GCAAAAGAAAAAAAAAATAT+TGG | - | chr3_4:597983-598002 | None:intergenic | 15.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | + | chr3_4:597855-597874 | Msa0483820:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | + | chr3_4:597856-597875 | Msa0483820:CDS | 25.0% |
| ! | TCCTAAAGGAATTATTCAAA+TGG | + | chr3_4:597855-597874 | Msa0483820:CDS | 25.0% |
| ! | CCTAAAGGAATTATTCAAAT+GGG | + | chr3_4:597856-597875 | Msa0483820:CDS | 25.0% |
| AAAGCAACTTGTAATAGTCA+TGG | + | chr3_4:597766-597785 | Msa0483820:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | - | chr3_4:597837-597856 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | + | chr3_4:597841-597860 | Msa0483820:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | - | chr3_4:597859-597878 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | - | chr3_4:598296-598315 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | + | chr3_4:598404-598423 | Msa0483820:intron | 30.0% | |
| ACAAATATTATCAGCGTCTT+TGG | - | chr3_4:598746-598765 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | + | chr3_4:598784-598803 | Msa0483820:CDS | 30.0% | |
| ! | GTTTTCAGCTAAGTAGTTTT+TGG | - | chr3_4:598950-598969 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | + | chr3_4:599044-599063 | Msa0483820:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | + | chr3_4:599055-599074 | Msa0483820:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | + | chr3_4:599123-599142 | Msa0483820:CDS | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | - | chr3_4:599140-599159 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | + | chr3_4:599229-599248 | Msa0483820:CDS | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | + | chr3_4:599313-599332 | Msa0483820:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | + | chr3_4:599314-599333 | Msa0483820:CDS | 30.0% | |
| AAAGCAACTTGTAATAGTCA+TGG | + | chr3_4:597766-597785 | Msa0483820:CDS | 30.0% | |
| GATTGTGAACATTATCGTAT+GGG | - | chr3_4:597837-597856 | None:intergenic | 30.0% | |
| GATAATGTTCACAATCCTAA+AGG | + | chr3_4:597841-597860 | Msa0483820:CDS | 30.0% | |
| CCCATTTGAATAATTCCTTT+AGG | - | chr3_4:597859-597878 | None:intergenic | 30.0% | |
| ! | AAAAACAATGTTACTTACCC+TGG | - | chr3_4:598296-598315 | None:intergenic | 30.0% |
| GATTTGATAGAGATCTTAAG+TGG | + | chr3_4:598404-598423 | Msa0483820:intron | 30.0% | |
| ACAAATATTATCAGCGTCTT+TGG | - | chr3_4:598746-598765 | None:intergenic | 30.0% | |
| TATAGTCTTTCCAAAGACTT+GGG | + | chr3_4:598784-598803 | Msa0483820:CDS | 30.0% | |
| ! | GTTTTCAGCTAAGTAGTTTT+TGG | - | chr3_4:598950-598969 | None:intergenic | 30.0% |
| !! | CAATGCAGGATTATTTTGTT+GGG | + | chr3_4:599044-599063 | Msa0483820:CDS | 30.0% |
| !!! | TATTTTGTTGGGTTGATATG+AGG | + | chr3_4:599055-599074 | Msa0483820:CDS | 30.0% |
| AAGAAAATAGTGTACCAAGT+TGG | + | chr3_4:599123-599142 | Msa0483820:CDS | 30.0% | |
| GTGAAATGTTTAAACCAACT+TGG | - | chr3_4:599140-599159 | None:intergenic | 30.0% | |
| !! | CTTTGAAACTAGCAATGAAA+AGG | + | chr3_4:599229-599248 | Msa0483820:CDS | 30.0% |
| AGAGAAATTTACTCACTAAG+TGG | + | chr3_4:599313-599332 | Msa0483820:CDS | 30.0% | |
| GAGAAATTTACTCACTAAGT+GGG | + | chr3_4:599314-599333 | Msa0483820:CDS | 30.0% | |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | - | chr3_4:597792-597811 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | + | chr3_4:597790-597809 | Msa0483820:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | + | chr3_4:597794-597813 | Msa0483820:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | + | chr3_4:597795-597814 | Msa0483820:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | - | chr3_4:597838-597857 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | + | chr3_4:598009-598028 | Msa0483820:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | + | chr3_4:598133-598152 | Msa0483820:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | + | chr3_4:598146-598165 | Msa0483820:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | + | chr3_4:598276-598295 | Msa0483820:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | - | chr3_4:598287-598306 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | - | chr3_4:598470-598489 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | + | chr3_4:598523-598542 | Msa0483820:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | - | chr3_4:598534-598553 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | + | chr3_4:598531-598550 | Msa0483820:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | - | chr3_4:598584-598603 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | + | chr3_4:598783-598802 | Msa0483820:CDS | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | + | chr3_4:598831-598850 | Msa0483820:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | - | chr3_4:598842-598861 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | - | chr3_4:598926-598945 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | + | chr3_4:599043-599062 | Msa0483820:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | - | chr3_4:599094-599113 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | + | chr3_4:599092-599111 | Msa0483820:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | + | chr3_4:599100-599119 | Msa0483820:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | + | chr3_4:599141-599160 | Msa0483820:CDS | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | + | chr3_4:599322-599341 | Msa0483820:CDS | 35.0% |
| ! | CTAAGAAGTATGAAGAGTCT+TGG | - | chr3_4:597792-597811 | None:intergenic | 35.0% |
| CAAGACTCTTCATACTTCTT+AGG | + | chr3_4:597790-597809 | Msa0483820:CDS | 35.0% | |
| ACTCTTCATACTTCTTAGGA+TGG | + | chr3_4:597794-597813 | Msa0483820:CDS | 35.0% | |
| CTCTTCATACTTCTTAGGAT+GGG | + | chr3_4:597795-597814 | Msa0483820:CDS | 35.0% | |
| GGATTGTGAACATTATCGTA+TGG | - | chr3_4:597838-597857 | None:intergenic | 35.0% | |
| ! | CTTTTGATCTCTTGGAATCA+TGG | + | chr3_4:598009-598028 | Msa0483820:CDS | 35.0% |
| !! | ACAAGCATTGGTAGATTTCA+TGG | + | chr3_4:598133-598152 | Msa0483820:CDS | 35.0% |
| GATTTCATGGCTGAAATTAG+AGG | + | chr3_4:598146-598165 | Msa0483820:CDS | 35.0% | |
| TTCCTACTCCTTATTATCCA+GGG | + | chr3_4:598276-598295 | Msa0483820:CDS | 35.0% | |
| GTTACTTACCCTGGATAATA+AGG | - | chr3_4:598287-598306 | None:intergenic | 35.0% | |
| TTCGGTTACTTGAAAGTTGT+TGG | - | chr3_4:598470-598489 | None:intergenic | 35.0% | |
| AAACGCAACCTTAAAGTCAA+AGG | + | chr3_4:598523-598542 | Msa0483820:CDS | 35.0% | |
| ! | CCATTACTCCTTTGACTTTA+AGG | - | chr3_4:598534-598553 | None:intergenic | 35.0% |
| CCTTAAAGTCAAAGGAGTAA+TGG | + | chr3_4:598531-598550 | Msa0483820:CDS | 35.0% | |
| TAATTCACTCCTTGACATTG+TGG | - | chr3_4:598584-598603 | None:intergenic | 35.0% | |
| CTATAGTCTTTCCAAAGACT+TGG | + | chr3_4:598783-598802 | Msa0483820:CDS | 35.0% | |
| CATCTACTCCGAAAATGATA+CGG | + | chr3_4:598831-598850 | Msa0483820:CDS | 35.0% | |
| ! | AGCAACAACCGTATCATTTT+CGG | - | chr3_4:598842-598861 | None:intergenic | 35.0% |
| !!! | GAATTTTTTGTCACCAAGCA+TGG | - | chr3_4:598926-598945 | None:intergenic | 35.0% |
| !! | GCAATGCAGGATTATTTTGT+TGG | + | chr3_4:599043-599062 | Msa0483820:CDS | 35.0% |
| CATTTCAGCTTCAAATGTGT+TGG | - | chr3_4:599094-599113 | None:intergenic | 35.0% | |
| ! | CAACACATTTGAAGCTGAAA+TGG | + | chr3_4:599092-599111 | Msa0483820:CDS | 35.0% |
| TTGAAGCTGAAATGGAACTA+TGG | + | chr3_4:599100-599119 | Msa0483820:CDS | 35.0% | |
| ! | GTTGGTTTAAACATTTCACC+TGG | + | chr3_4:599141-599160 | Msa0483820:CDS | 35.0% |
| !! | TACTCACTAAGTGGGTTTTT+CGG | + | chr3_4:599322-599341 | Msa0483820:CDS | 35.0% |
| ! | CTTTTGAATCCAGATGCATC+TGG | - | chr3_4:598047-598066 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | + | chr3_4:598050-598069 | Msa0483820:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+TGG | - | chr3_4:598125-598144 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | - | chr3_4:598210-598229 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | + | chr3_4:598239-598258 | Msa0483820:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | - | chr3_4:598274-598293 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | - | chr3_4:598277-598296 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | + | chr3_4:598275-598294 | Msa0483820:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | - | chr3_4:598281-598300 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | + | chr3_4:598412-598431 | Msa0483820:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | - | chr3_4:598451-598470 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | - | chr3_4:598488-598507 | None:intergenic | 40.0% |
| ATTGCAACAAGCATACCAAG+AGG | + | chr3_4:598495-598514 | Msa0483820:CDS | 40.0% | |
| ATAAGCGACGAGATTTACTC+CGG | + | chr3_4:598649-598668 | Msa0483820:CDS | 40.0% | |
| TCCAAATTTCATCAGCGTCA+TGG | + | chr3_4:598687-598706 | Msa0483820:CDS | 40.0% | |
| TCCATGACGCTGATGAAATT+TGG | - | chr3_4:598691-598710 | None:intergenic | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | - | chr3_4:598833-598852 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | - | chr3_4:598923-598942 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | + | chr3_4:598987-599006 | Msa0483820:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | + | chr3_4:599003-599022 | Msa0483820:CDS | 40.0% |
| CAGCTTCAAATGTGTTGGAA+TGG | - | chr3_4:599089-599108 | None:intergenic | 40.0% | |
| GTACAATGACAAGATGAACC+AGG | - | chr3_4:599162-599181 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | + | chr3_4:599168-599187 | Msa0483820:CDS | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | - | chr3_4:599277-599296 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | + | chr3_4:599356-599375 | Msa0483820:CDS | 40.0% | |
| AACGTGATCAACAAGAGGAA+CGG | + | chr3_4:599361-599380 | Msa0483820:CDS | 40.0% | |
| ! | CTTTTGAATCCAGATGCATC+TGG | - | chr3_4:598047-598066 | None:intergenic | 40.0% |
| GCATCTGGATTCAAAAGAGA+TGG | + | chr3_4:598050-598069 | Msa0483820:CDS | 40.0% | |
| ACCAATGCTTGTTTGAATGC+TGG | - | chr3_4:598125-598144 | None:intergenic | 40.0% | |
| ! | ATTTGCTGAAGTAGAACCTG+CGG | - | chr3_4:598210-598229 | None:intergenic | 40.0% |
| ! | ATGTTTTGTCTTGCCGAGAA+AGG | + | chr3_4:598239-598258 | Msa0483820:CDS | 40.0% |
| GATAATAAGGAGTAGGAAGG+AGG | - | chr3_4:598274-598293 | None:intergenic | 40.0% | |
| CTGGATAATAAGGAGTAGGA+AGG | - | chr3_4:598277-598296 | None:intergenic | 40.0% | |
| CTTCCTACTCCTTATTATCC+AGG | + | chr3_4:598275-598294 | Msa0483820:CDS | 40.0% | |
| TACCCTGGATAATAAGGAGT+AGG | - | chr3_4:598281-598300 | None:intergenic | 40.0% | |
| AGAGATCTTAAGTGGAGAAC+TGG | + | chr3_4:598412-598431 | Msa0483820:CDS | 40.0% | |
| TTGGAGCTTGTGCAATGTAT+TGG | - | chr3_4:598451-598470 | None:intergenic | 40.0% | |
| ! | TGCTTGTTGCAATGCTTGTT+CGG | - | chr3_4:598488-598507 | None:intergenic | 40.0% |
| ATTGCAACAAGCATACCAAG+AGG | + | chr3_4:598495-598514 | Msa0483820:CDS | 40.0% | |
| ATAAGCGACGAGATTTACTC+CGG | + | chr3_4:598649-598668 | Msa0483820:CDS | 40.0% | |
| TCCAAATTTCATCAGCGTCA+TGG | + | chr3_4:598687-598706 | Msa0483820:CDS | 40.0% | |
| TCCATGACGCTGATGAAATT+TGG | - | chr3_4:598691-598710 | None:intergenic | 40.0% | |
| ! | CGTATCATTTTCGGAGTAGA+TGG | - | chr3_4:598833-598852 | None:intergenic | 40.0% |
| !!! | TTTTTTGTCACCAAGCATGG+CGG | - | chr3_4:598923-598942 | None:intergenic | 40.0% |
| ! | ACGTCAGAACAAGCTTGTTT+CGG | + | chr3_4:598987-599006 | Msa0483820:CDS | 40.0% |
| !! | GTTTCGGGTTTACAAAAAGC+CGG | + | chr3_4:599003-599022 | Msa0483820:CDS | 40.0% |
| CAGCTTCAAATGTGTTGGAA+TGG | - | chr3_4:599089-599108 | None:intergenic | 40.0% | |
| GTACAATGACAAGATGAACC+AGG | - | chr3_4:599162-599181 | None:intergenic | 40.0% | |
| TCTTGTCATTGTACAGAACC+AGG | + | chr3_4:599168-599187 | Msa0483820:CDS | 40.0% | |
| AACACCATTAACATTGCCAG+TGG | - | chr3_4:599277-599296 | None:intergenic | 40.0% | |
| TGATCAACGTGATCAACAAG+AGG | + | chr3_4:599356-599375 | Msa0483820:CDS | 40.0% | |
| AACGTGATCAACAAGAGGAA+CGG | + | chr3_4:599361-599380 | Msa0483820:CDS | 40.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | + | chr3_4:598001-598020 | Msa0483820:intron | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | + | chr3_4:598035-598054 | Msa0483820:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | - | chr3_4:598081-598100 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | - | chr3_4:598088-598107 | None:intergenic | 45.0% | |
| GCCAGCATTCAAACAAGCAT+TGG | + | chr3_4:598121-598140 | Msa0483820:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | - | chr3_4:598255-598274 | None:intergenic | 45.0% | |
| TGGAGAGGAAAAAACAGTGC+CGG | - | chr3_4:598671-598690 | None:intergenic | 45.0% | |
| GACGCTGATGAAATTTGGAG+AGG | - | chr3_4:598686-598705 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | + | chr3_4:598988-599007 | Msa0483820:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | + | chr3_4:599017-599036 | Msa0483820:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | - | chr3_4:599025-599044 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | + | chr3_4:599172-599191 | Msa0483820:CDS | 45.0% | |
| AAACACACACGAAACCAACC+TGG | - | chr3_4:599189-599208 | None:intergenic | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | + | chr3_4:599270-599289 | Msa0483820:CDS | 45.0% | |
| ! | GCAGCTCTCTTTTGATCTCT+TGG | + | chr3_4:598001-598020 | Msa0483820:intron | 45.0% |
| GCTAAGAATCCAGATGCATC+TGG | + | chr3_4:598035-598054 | Msa0483820:CDS | 45.0% | |
| GAGAGCAAGTTCACGGAATA+TGG | - | chr3_4:598081-598100 | None:intergenic | 45.0% | |
| CTTGGAAGAGAGCAAGTTCA+CGG | - | chr3_4:598088-598107 | None:intergenic | 45.0% | |
| GCCAGCATTCAAACAAGCAT+TGG | + | chr3_4:598121-598140 | Msa0483820:CDS | 45.0% | |
| GAGGAATGCTTCTCCTTTCT+CGG | - | chr3_4:598255-598274 | None:intergenic | 45.0% | |
| TGGAGAGGAAAAAACAGTGC+CGG | - | chr3_4:598671-598690 | None:intergenic | 45.0% | |
| GACGCTGATGAAATTTGGAG+AGG | - | chr3_4:598686-598705 | None:intergenic | 45.0% | |
| ! | CGTCAGAACAAGCTTGTTTC+GGG | + | chr3_4:598988-599007 | Msa0483820:CDS | 45.0% |
| AAAAGCCGGAATTAGCTGCT+TGG | + | chr3_4:599017-599036 | Msa0483820:CDS | 45.0% | |
| GCTTTCCAAGCAGCTAATTC+CGG | - | chr3_4:599025-599044 | None:intergenic | 45.0% | |
| GTCATTGTACAGAACCAGGT+TGG | + | chr3_4:599172-599191 | Msa0483820:CDS | 45.0% | |
| AAACACACACGAAACCAACC+TGG | - | chr3_4:599189-599208 | None:intergenic | 45.0% | |
| GAGTCCACTGGCAATGTTAA+TGG | + | chr3_4:599270-599289 | Msa0483820:CDS | 45.0% | |
| GCTCTCTTCCAAGACTACCA+TGG | + | chr3_4:598095-598114 | Msa0483820:CDS | 50.0% | |
| GTTTGAATGCTGGCATGCCA+TGG | - | chr3_4:598115-598134 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | - | chr3_4:598191-598210 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | - | chr3_4:598192-598211 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | + | chr3_4:598191-598210 | Msa0483820:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | - | chr3_4:598196-598215 | None:intergenic | 50.0% | |
| ! | GGTTGCGTTTTTGTGCCTCT+TGG | - | chr3_4:598513-598532 | None:intergenic | 50.0% |
| ACAAACCCATCAAACCCGCT+AGG | + | chr3_4:598556-598575 | Msa0483820:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | - | chr3_4:598573-598592 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | - | chr3_4:598574-598593 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | + | chr3_4:598793-598812 | Msa0483820:CDS | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | - | chr3_4:598797-598816 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | + | chr3_4:598865-598884 | Msa0483820:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | + | chr3_4:598910-598929 | Msa0483820:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | + | chr3_4:599030-599049 | Msa0483820:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | + | chr3_4:599258-599277 | Msa0483820:CDS | 50.0% | |
| GCTCTCTTCCAAGACTACCA+TGG | + | chr3_4:598095-598114 | Msa0483820:CDS | 50.0% | |
| GTTTGAATGCTGGCATGCCA+TGG | - | chr3_4:598115-598134 | None:intergenic | 50.0% | |
| GCGGTGAGAACTATGTGGTT+GGG | - | chr3_4:598191-598210 | None:intergenic | 50.0% | |
| TGCGGTGAGAACTATGTGGT+TGG | - | chr3_4:598192-598211 | None:intergenic | 50.0% | |
| AACCACATAGTTCTCACCGC+AGG | + | chr3_4:598191-598210 | Msa0483820:CDS | 50.0% | |
| AACCTGCGGTGAGAACTATG+TGG | - | chr3_4:598196-598215 | None:intergenic | 50.0% | |
| ! | GGTTGCGTTTTTGTGCCTCT+TGG | - | chr3_4:598513-598532 | None:intergenic | 50.0% |
| ACAAACCCATCAAACCCGCT+AGG | + | chr3_4:598556-598575 | Msa0483820:CDS | 50.0% | |
| TTGACATTGTGGTGCCTAGC+GGG | - | chr3_4:598573-598592 | None:intergenic | 50.0% | |
| CTTGACATTGTGGTGCCTAG+CGG | - | chr3_4:598574-598593 | None:intergenic | 50.0% | |
| TCCAAAGACTTGGGTTTGCC+AGG | + | chr3_4:598793-598812 | Msa0483820:CDS | 50.0% | |
| ACCTGGCAAACCCAAGTCTT+TGG | - | chr3_4:598797-598816 | None:intergenic | 50.0% | |
| GCCACGAAGATGTCAAGCTT+CGG | + | chr3_4:598865-598884 | Msa0483820:CDS | 50.0% | |
| TACCTTCTTTCCGCCATGCT+TGG | + | chr3_4:598910-598929 | Msa0483820:CDS | 50.0% | |
| AGCTGCTTGGAAAGCAATGC+AGG | + | chr3_4:599030-599049 | Msa0483820:CDS | 50.0% | |
| GCTTTCGTTGTTGAGTCCAC+TGG | + | chr3_4:599258-599277 | Msa0483820:CDS | 50.0% | |
| CTGGCATGCCATGGTAGTCT+TGG | - | chr3_4:598106-598125 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | - | chr3_4:598564-598583 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | + | chr3_4:598572-598591 | Msa0483820:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | + | chr3_4:598805-598824 | Msa0483820:CDS | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | - | chr3_4:598869-598888 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | - | chr3_4:598915-598934 | None:intergenic | 55.0% |
| CTGGCATGCCATGGTAGTCT+TGG | - | chr3_4:598106-598125 | None:intergenic | 55.0% | |
| !! | TGGTGCCTAGCGGGTTTGAT+GGG | - | chr3_4:598564-598583 | None:intergenic | 55.0% |
| CGCTAGGCACCACAATGTCA+AGG | + | chr3_4:598572-598591 | Msa0483820:CDS | 55.0% | |
| GGTTTGCCAGGTTTCCGTGT+TGG | + | chr3_4:598805-598824 | Msa0483820:CDS | 55.0% | |
| GCCGAAGCTTGACATCTTCG+TGG | - | chr3_4:598869-598888 | None:intergenic | 55.0% | |
| ! | CACCAAGCATGGCGGAAAGA+AGG | - | chr3_4:598915-598934 | None:intergenic | 55.0% |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | - | chr3_4:598565-598584 | None:intergenic | 60.0% |
| ATGGCGCCAACACGGAAACC+TGG | - | chr3_4:598814-598833 | None:intergenic | 60.0% | |
| CGGAGTAGATGGCGCCAACA+CGG | - | chr3_4:598822-598841 | None:intergenic | 60.0% | |
| !! | GTGGTGCCTAGCGGGTTTGA+TGG | - | chr3_4:598565-598584 | None:intergenic | 60.0% |
| ATGGCGCCAACACGGAAACC+TGG | - | chr3_4:598814-598833 | None:intergenic | 60.0% | |
| CGGAGTAGATGGCGCCAACA+CGG | - | chr3_4:598822-598841 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3_4 | gene | 597748 | 599386 | 597748 | ID=Msa0483820;Name=Msa0483820 |
| chr3_4 | mRNA | 597748 | 599386 | 597748 | ID=Msa0483820-mRNA-1;Parent=Msa0483820;Name=Msa0483820-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|3|0|473 |
| chr3_4 | exon | 597748 | 597894 | 597748 | ID=Msa0483820-mRNA-1:exon:195;Parent=Msa0483820-mRNA-1 |
| chr3_4 | exon | 598005 | 598297 | 598005 | ID=Msa0483820-mRNA-1:exon:196;Parent=Msa0483820-mRNA-1 |
| chr3_4 | exon | 598405 | 599386 | 598405 | ID=Msa0483820-mRNA-1:exon:197;Parent=Msa0483820-mRNA-1 |
| chr3_4 | CDS | 597748 | 597894 | 597748 | ID=Msa0483820-mRNA-1:cds;Parent=Msa0483820-mRNA-1 |
| chr3_4 | CDS | 598005 | 598297 | 598005 | ID=Msa0483820-mRNA-1:cds;Parent=Msa0483820-mRNA-1 |
| chr3_4 | CDS | 598405 | 599386 | 598405 | ID=Msa0483820-mRNA-1:cds;Parent=Msa0483820-mRNA-1 |
| Gene Sequence |
| Protein sequence |
