AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa1007560

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007560 MtrunA17_Chr7g0217941 98.418 316 5 0 1 316 1 316 0.0 655
Msa1007560 MtrunA17_Chr6g0453551 81.329 316 59 0 1 316 1 316 0.0 556
Msa1007560 MtrunA17_Chr6g0487101 47.586 290 138 5 14 296 93 375 2.69e-87 266
Msa1007560 MtrunA17_Chr8g0389771 45.517 290 146 4 14 296 88 372 6.62e-87 265
Msa1007560 MtrunA17_Chr5g0399221 40.645 310 164 7 5 305 62 360 8.42e-70 221
Msa1007560 MtrunA17_Chr1g0194311 40.264 303 165 7 8 304 76 368 2.48e-68 217
Msa1007560 MtrunA17_Chr4g0070051 39.869 306 154 8 5 298 53 340 3.25e-67 214
Msa1007560 MtrunA17_Chr7g0258341 39.016 305 156 5 8 296 92 382 4.95e-64 207
Msa1007560 MtrunA17_Chr4g0037751 37.162 296 165 5 3 290 68 350 4.14e-62 201
Msa1007560 MtrunA17_Chr2g0294321 37.013 308 164 6 8 304 58 346 1.59e-61 199
Msa1007560 MtrunA17_Chr8g0345281 37.722 281 154 3 8 277 281 551 2.60e-61 205
Msa1007560 MtrunA17_Chr5g0446301 38.567 293 165 7 12 296 67 352 4.07e-61 198
Msa1007560 MtrunA17_Chr5g0420831 35.811 296 169 4 3 290 68 350 6.37e-61 198
Msa1007560 MtrunA17_Chr7g0265201 38.436 307 156 6 2 296 95 380 6.49e-59 194
Msa1007560 MtrunA17_Chr8g0351871 35.443 316 167 6 5 306 32 324 2.27e-58 191
Msa1007560 MtrunA17_Chr6g0466961 36.913 298 165 6 7 298 41 321 7.31e-58 189
Msa1007560 MtrunA17_Chr2g0295851 36.066 305 162 9 8 304 57 336 1.54e-57 189
Msa1007560 MtrunA17_Chr4g0069881 36.601 306 169 6 5 295 223 518 5.11e-56 189
Msa1007560 MtrunA17_Chr6g0466951 34.471 293 169 6 12 298 75 350 2.05e-54 181
Msa1007560 MtrunA17_Chr4g0018371 37.544 285 151 6 8 277 229 501 1.88e-53 183
Msa1007560 MtrunA17_Chr1g0192331 34.967 306 171 6 8 295 216 511 2.52e-52 180
Msa1007560 MtrunA17_Chr4g0011751 33.226 310 180 6 6 298 176 475 3.52e-52 178
Msa1007560 MtrunA17_Chr4g0069841 33.663 303 177 4 8 296 208 500 2.00e-51 177
Msa1007560 MtrunA17_Chr3g0090091 34.276 283 163 5 8 277 218 490 7.96e-51 176
Msa1007560 MtrunA17_Chr1g0192321 33.025 324 186 8 8 316 274 581 1.73e-50 176
Msa1007560 MtrunA17_Chr7g0269541 35.762 302 170 4 8 295 248 539 1.75e-50 175
Msa1007560 MtrunA17_Chr5g0440871 34.754 305 168 6 8 306 41 320 3.36e-50 169
Msa1007560 MtrunA17_Chr7g0272141 35.273 275 160 3 8 277 243 504 4.77e-50 174
Msa1007560 MtrunA17_Chr2g0295531 33.437 323 187 8 8 315 234 543 5.51e-50 175
Msa1007560 MtrunA17_Chr3g0079351 33.922 283 164 5 8 277 217 489 5.76e-50 173
Msa1007560 MtrunA17_Chr3g0079361 33.569 283 165 5 8 277 217 489 1.98e-49 172
Msa1007560 MtrunA17_Chr3g0079341 33.569 283 165 5 8 277 217 489 2.25e-49 172
Msa1007560 MtrunA17_Chr1g0161731 33.670 297 168 5 14 298 57 336 9.24e-49 166
Msa1007560 MtrunA17_Chr7g0269521 33.333 318 183 9 5 306 249 553 3.32e-48 169
Msa1007560 MtrunA17_Chr7g0272151 33.025 324 185 8 8 315 273 580 5.72e-48 169
Msa1007560 MtrunA17_Chr4g0069861 33.444 302 177 4 8 295 209 500 3.52e-47 166
Msa1007560 MtrunA17_Chr2g0295551 30.960 323 195 7 8 315 252 561 3.70e-47 166
Msa1007560 MtrunA17_Chr1g0195301 32.817 323 185 9 10 316 247 553 4.21e-47 166
Msa1007560 MtrunA17_Chr1g0195321 32.817 323 185 9 10 316 247 553 4.21e-47 166
Msa1007560 MtrunA17_Chr4g0011771 33.540 322 183 8 8 316 208 511 5.58e-47 165
Msa1007560 MtrunA17_Chr2g0302021 32.013 303 182 4 8 296 217 509 6.69e-47 165
Msa1007560 MtrunA17_Chr8g0391311 34.043 282 164 4 8 277 232 503 8.63e-47 165
Msa1007560 MtrunA17_Chr7g0269511 34.375 288 163 7 5 277 251 527 1.08e-46 165
Msa1007560 MtrunA17_Chr3g0080391 32.323 297 182 4 8 295 271 557 1.97e-46 165
Msa1007560 MtrunA17_Chr3g0080381 33.882 304 173 6 8 294 318 610 2.59e-46 165
Msa1007560 MtrunA17_Chr1g0175661 32.990 291 171 5 1 277 241 521 2.71e-46 164
Msa1007560 MtrunA17_Chr8g0391291 32.624 282 168 4 8 277 230 501 5.24e-46 163
Msa1007560 MtrunA17_Chr1g0195331 32.508 323 186 9 10 316 247 553 1.04e-45 162
Msa1007560 MtrunA17_Chr4g0011791 34.783 299 171 7 8 295 207 492 1.19e-45 161
Msa1007560 MtrunA17_Chr4g0025841 35.827 254 135 5 1 248 32 263 1.38e-45 155
Msa1007560 MtrunA17_Chr8g0354911 34.507 284 162 4 8 277 302 575 2.89e-45 162
Msa1007560 MtrunA17_Chr7g0269531 31.611 329 188 9 5 314 251 561 4.53e-45 161
Msa1007560 MtrunA17_Chr8g0354901 32.215 298 183 5 8 296 278 565 6.72e-45 160
Msa1007560 MtrunA17_Chr7g0270691 32.803 314 185 8 4 304 238 538 7.15e-45 160
Msa1007560 MtrunA17_Chr8g0384121 32.673 303 174 5 14 295 254 547 1.15e-44 160
Msa1007560 MtrunA17_Chr5g0437831 31.511 311 186 7 8 304 75 372 1.59e-44 156
Msa1007560 MtrunA17_Chr1g0195351 32.508 323 184 10 10 316 247 551 2.27e-44 159
Msa1007560 MtrunA17_Chr4g0067601 33.571 280 166 4 8 277 260 529 2.49e-44 159
Msa1007560 MtrunA17_Chr3g0126771 31.683 303 182 6 8 295 288 580 2.93e-44 159
Msa1007560 MtrunA17_Chr2g0334111 31.387 274 160 4 12 277 32 285 3.77e-44 153
Msa1007560 MtrunA17_Chr7g0233801 31.449 283 171 5 8 277 244 516 1.09e-43 157
Msa1007560 MtrunA17_Chr8g0380581 30.745 322 194 9 8 315 67 373 1.30e-43 153
Msa1007560 MtrunA17_Chr1g0194091 31.373 306 186 6 8 299 255 550 1.57e-43 157
Msa1007560 MtrunA17_Chr1g0192311 31.359 287 172 6 7 278 258 534 1.65e-43 157
Msa1007560 MtrunA17_Chr1g0192281 31.359 287 172 6 7 278 258 534 1.65e-43 157
Msa1007560 MtrunA17_Chr7g0233831 31.802 283 170 5 8 277 245 517 2.25e-43 156
Msa1007560 MtrunA17_Chr3g0129921 30.696 316 186 5 3 295 242 547 2.47e-43 156
Msa1007560 MtrunA17_Chr4g0000121 31.597 288 170 7 7 278 245 521 5.03e-43 155
Msa1007560 MtrunA17_Chr1g0147051 32.710 321 184 8 1 304 291 596 6.77e-43 155
Msa1007560 MtrunA17_Chr8g0345211 33.226 310 180 8 8 304 276 571 9.31e-43 155
Msa1007560 MtrunA17_Chr7g0268241 31.153 321 185 9 8 316 52 348 1.90e-42 149
Msa1007560 MtrunA17_Chr1g0192301 31.724 290 167 8 7 278 263 539 2.97e-42 154
Msa1007560 MtrunA17_Chr4g0067611 32.143 280 170 3 8 277 260 529 4.43e-42 153
Msa1007560 MtrunA17_Chr2g0302001 35.055 271 151 7 39 295 161 420 5.46e-42 150
Msa1007560 MtrunA17_Chr7g0233771 31.095 283 172 5 8 277 244 516 7.15e-42 152
Msa1007560 MtrunA17_Chr7g0234711 38.021 192 107 3 98 277 40 231 1.65e-41 145
Msa1007560 MtrunA17_Chr4g0069891 31.849 292 176 5 8 287 287 567 4.48e-41 150
Msa1007560 MtrunA17_Chr2g0295541 29.014 355 191 8 8 315 252 592 4.75e-41 150
Msa1007560 MtrunA17_Chr2g0314691 39.894 188 103 4 111 290 5 190 7.36e-40 139
Msa1007560 MtrunA17_Chr1g0194081 30.903 288 178 5 8 284 257 534 1.37e-39 146
Msa1007560 MtrunA17_Chr2g0301931 30.657 274 170 4 33 296 14 277 2.19e-39 140
Msa1007560 MtrunA17_Chr1g0195311 33.935 277 154 8 53 316 52 312 2.56e-39 140
Msa1007560 MtrunA17_Chr7g0270651 29.819 332 186 8 8 314 261 570 3.39e-37 139
Msa1007560 MtrunA17_Chr6g0459781 36.872 179 101 4 4 177 11 182 3.80e-36 129
Msa1007560 MtrunA17_Chr7g0270661 30.556 324 192 9 8 313 261 569 5.97e-36 136
Msa1007560 MtrunA17_Chr7g0270671 30.556 324 192 9 8 313 261 569 5.97e-36 136
Msa1007560 MtrunA17_Chr7g0270631 30.690 290 162 5 8 277 249 519 2.60e-35 135
Msa1007560 MtrunA17_Chr7g0270631 29.758 289 174 4 8 277 797 1075 4.30e-35 135
Msa1007560 MtrunA17_Chr7g0265161 36.449 214 113 5 88 296 12 207 2.29e-34 125
Msa1007560 MtrunA17_Chr5g0440901 45.926 135 65 2 119 248 11 142 7.18e-34 121
Msa1007560 MtrunA17_Chr6g0460141 43.284 134 68 3 45 175 16 144 1.41e-29 110
Msa1007560 MtrunA17_Chr7g0271381 28.435 313 179 9 8 290 242 539 3.08e-29 117
Msa1007560 MtrunA17_Chr5g0440891 37.059 170 86 3 8 175 50 200 3.94e-25 100
Msa1007560 MtrunA17_Chr4g0073911 30.769 195 110 5 17 199 19 200 3.25e-20 88.2
Msa1007560 MtrunA17_Chr6g0459791 37.398 123 70 3 185 306 2 118 1.59e-19 82.8
Msa1007560 MtrunA17_Chr5g0437821 31.343 134 80 2 129 250 4 137 7.49e-18 78.6
Msa1007560 MtrunA17_Chr5g0440881 32.593 135 88 1 164 298 5 136 3.44e-17 77.4
Msa1007560 MtrunA17_Chr2g0299431 32.143 140 82 3 8 145 54 182 7.07e-14 70.9
Msa1007560 MtrunA17_Chr2g0314701 32.727 110 63 1 2 111 67 165 1.40e-12 65.9
Msa1007560 MtrunA17_Chr5g0444991 39.506 81 46 1 174 254 1 78 1.79e-12 62.0
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa1007560 AT3G29090.1 80.906 309 59 0 8 316 9 317 0.0 535
Msa1007560 AT5G19730.1 46.939 294 142 4 10 296 90 376 3.36e-87 266
Msa1007560 AT2G21610.1 39.216 306 161 6 3 304 48 332 1.10e-71 226
Msa1007560 AT2G21610.2 39.216 306 161 6 3 304 53 337 1.39e-71 226
Msa1007560 AT5G47500.1 38.462 312 172 7 5 307 60 360 5.40e-70 222
Msa1007560 AT2G36700.1 39.159 309 163 5 5 304 41 333 3.26e-68 216
Msa1007560 AT2G36710.1 37.898 314 167 5 3 304 88 385 8.68e-67 215
Msa1007560 AT3G17060.1 38.312 308 160 7 8 304 48 336 8.20e-66 210
Msa1007560 AT5G07430.1 37.217 309 172 5 2 304 63 355 1.38e-64 207
Msa1007560 AT1G05310.1 38.462 312 161 5 8 304 93 388 2.36e-64 208
Msa1007560 AT5G61680.1 37.134 307 170 5 5 304 68 358 6.76e-64 206
Msa1007560 AT1G69940.1 37.024 289 162 4 14 295 74 349 3.29e-63 204
Msa1007560 AT5G55590.1 39.465 299 166 5 5 295 81 372 4.46e-62 202
Msa1007560 AT5G07420.1 36.700 297 169 4 5 295 66 349 6.79e-62 201
Msa1007560 AT5G07410.1 36.332 289 164 4 14 295 74 349 1.71e-60 197
Msa1007560 AT5G55590.2 40.541 259 139 5 5 255 81 332 2.37e-56 186
Msa1007560 AT3G06830.1 35.077 325 177 9 8 316 260 566 1.78e-55 189
Msa1007560 AT4G00190.1 35.484 310 174 7 8 304 167 463 2.82e-55 187
Msa1007560 AT4G33230.1 35.505 307 172 8 7 298 298 593 2.97e-54 187
Msa1007560 AT5G49180.1 35.762 302 170 6 8 295 262 553 4.24e-54 186
Msa1007560 AT3G05610.1 32.710 321 187 6 8 315 258 562 6.12e-53 184
Msa1007560 AT1G11580.1 35.314 303 170 8 8 295 249 540 8.99e-53 182
Msa1007560 AT1G11580.2 35.314 303 170 8 8 295 270 561 1.27e-52 182
Msa1007560 AT3G05620.1 36.184 304 171 6 8 304 243 530 1.53e-52 181
Msa1007560 AT5G27870.1 32.500 320 187 6 8 314 255 558 4.94e-52 182
Msa1007560 AT2G26450.1 34.539 304 173 8 7 295 303 595 1.51e-51 179
Msa1007560 AT1G23200.1 36.000 300 167 6 8 296 253 538 1.55e-51 178
Msa1007560 AT5G26810.1 35.621 306 173 5 7 298 35 330 5.15e-51 172
Msa1007560 AT3G24130.1 33.770 305 169 7 8 296 36 323 9.50e-51 171
Msa1007560 AT4G03930.1 32.710 321 188 8 8 316 218 522 3.09e-50 174
Msa1007560 AT3G14310.1 34.752 282 163 3 7 277 283 554 3.41e-50 176
Msa1007560 AT1G53830.1 34.983 303 173 4 7 295 278 570 3.52e-50 175
Msa1007560 AT5G18990.1 32.131 305 174 5 8 296 31 318 9.02e-50 169
Msa1007560 AT4G02300.1 34.754 305 173 7 7 296 223 516 1.88e-49 172
Msa1007560 AT5G64640.1 34.810 316 172 8 7 298 290 595 4.74e-49 172
Msa1007560 AT2G47040.1 34.722 288 168 5 4 279 282 561 8.95e-49 172
Msa1007560 AT3G43270.1 35.943 281 159 3 8 277 217 487 1.00e-48 171
Msa1007560 AT4G02320.1 33.230 322 185 6 8 315 210 515 1.54e-48 170
Msa1007560 AT1G11370.1 34.538 249 142 3 8 245 48 286 1.72e-48 164
Msa1007560 AT3G27980.1 32.087 321 190 7 8 316 191 495 1.87e-48 169
Msa1007560 AT2G47280.1 33.648 318 177 7 3 306 32 329 2.37e-48 165
Msa1007560 AT2G47030.1 34.615 286 167 4 6 279 277 554 2.73e-48 170
Msa1007560 AT1G11590.1 32.087 321 190 7 8 316 218 522 3.24e-48 169
Msa1007560 AT4G15980.1 33.129 326 182 8 8 316 394 700 6.00e-48 171
Msa1007560 AT4G15980.2 33.129 326 182 8 8 316 404 710 6.61e-48 171
Msa1007560 AT2G45220.1 34.884 301 169 7 8 295 209 495 1.07e-47 167
Msa1007560 AT3G62170.1 33.333 288 172 5 4 279 275 554 1.20e-47 169
Msa1007560 AT2G19150.1 32.573 307 184 5 8 306 43 334 1.96e-47 162
Msa1007560 AT5G09760.1 32.692 312 181 4 7 298 242 544 2.27e-47 167
Msa1007560 AT3G10710.1 33.557 298 179 5 8 296 258 545 2.30e-47 167
Msa1007560 AT4G02330.1 32.154 311 185 5 1 295 254 554 2.38e-47 167
Msa1007560 AT5G09760.2 32.692 312 181 4 7 298 268 570 3.35e-47 167
Msa1007560 AT5G04960.1 32.288 319 190 7 8 316 260 562 3.48e-47 167
Msa1007560 AT3G10720.2 33.981 309 173 7 15 306 312 606 3.82e-47 167
Msa1007560 AT2G26440.1 34.982 283 159 4 8 277 240 510 1.40e-46 165
Msa1007560 AT2G47550.1 33.962 318 181 6 5 306 245 549 1.57e-46 165
Msa1007560 AT1G02810.1 34.021 291 168 4 1 277 260 540 2.27e-46 165
Msa1007560 AT4G33220.2 32.343 303 181 4 7 295 93 385 2.93e-45 159
Msa1007560 AT3G60730.1 31.329 316 187 7 6 304 206 508 8.23e-45 160
Msa1007560 AT3G59010.1 31.908 304 183 6 8 304 231 517 9.95e-45 160
Msa1007560 AT1G53840.1 32.776 299 181 5 7 295 282 570 1.41e-44 160
Msa1007560 AT4G33220.1 32.343 303 181 4 7 295 214 506 2.55e-44 159
Msa1007560 AT3G49220.1 33.003 303 178 5 8 295 287 579 2.67e-44 160
Msa1007560 AT2G43050.1 32.215 298 180 5 8 296 216 500 2.76e-44 158
Msa1007560 AT3G49220.3 33.003 303 178 5 8 295 332 624 3.99e-44 160
Msa1007560 AT5G51490.1 35.294 289 154 6 8 277 224 498 7.58e-44 157
Msa1007560 AT5G20860.2 32.268 313 179 10 8 304 232 527 1.10e-43 157
Msa1007560 AT5G04970.1 31.013 316 189 6 7 306 309 611 1.82e-43 157
Msa1007560 AT3G14300.1 31.962 316 191 8 7 310 662 965 2.23e-43 159
Msa1007560 AT3G10720.1 36.170 235 134 4 85 306 19 250 4.61e-43 149
Msa1007560 AT3G47400.1 33.803 284 164 8 8 277 283 556 6.15e-42 153
Msa1007560 AT5G53370.1 32.588 313 183 6 7 304 275 574 2.87e-41 151
Msa1007560 AT5G53370.2 32.588 313 183 6 7 304 311 610 2.91e-41 152
Msa1007560 AT5G51500.1 33.684 285 164 5 8 277 228 502 5.40e-41 150
Msa1007560 AT2G19150.2 33.333 249 146 4 8 248 43 279 2.31e-38 137
Msa1007560 AT5G20860.1 27.817 284 149 6 8 277 232 473 1.12e-32 127
Msa1007560 AT1G44980.1 30.233 172 110 2 8 179 80 241 6.30e-20 87.4

Find 103 sgRNAs with CRISPR-Local

Find 357 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CGGCAATAGCACTGCTCTTT+TGG 0.217025 7_1:+7103529 Msa1007560:CDS
GACAAGTTGGCTGGGATAAC+TGG 0.230659 7_1:+7104329 Msa1007560:CDS
CACCAATTTGCTCGATTTGA+TGG 0.259447 7_1:-7104944 None:intergenic
TTCTCTTTCCGGCAGGGTTC+AGG 0.260271 7_1:+7102839 Msa1007560:intron
AAAATAAAATAAATTAATAA+AGG 0.277575 7_1:-7105519 None:intergenic
GTAACTACATACAGATGTTT+TGG 0.283876 7_1:+7104908 Msa1007560:intron
AAGAAATCTCATACAGAAAA+AGG 0.285116 7_1:-7105149 None:intergenic
AAGAATTTCATCACTCTTGC+TGG 0.302602 7_1:+7100777 Msa1007560:CDS
GGTTTGGTGTTAATGGAAAA+TGG 0.304254 7_1:-7100576 None:intergenic
GTGATGAAATTCTTCGTCTT+AGG 0.309044 7_1:-7100768 None:intergenic
AATAAATTAATAAAGGGTTC+AGG 0.336819 7_1:-7105512 None:intergenic
TTCTACAATTGTAGGTTCCT+TGG 0.339872 7_1:+7102902 Msa1007560:CDS
GATGTGCCTTCTACAATTGT+AGG 0.341539 7_1:+7102894 Msa1007560:CDS
GGACGACCATGGGGACCTTT+TGG 0.343712 7_1:+7104265 Msa1007560:CDS
AGCCAAGATCTATCTGGTTC+TGG 0.369784 7_1:-7105022 None:intergenic
GAGCATTTCTACGCAGAATA+TGG 0.387250 7_1:-7105070 None:intergenic
GTCCATCAAATCGAGCAAAT+TGG 0.388940 7_1:+7104942 Msa1007560:CDS
TGAGCAAGCCAAGATCTATC+TGG 0.389043 7_1:-7105028 None:intergenic
TTGCAGCCTGCTAGGGTGAT+TGG 0.389420 7_1:+7101884 Msa1007560:intron
CCTGCTAGGGTGATTGGAAC+TGG 0.391611 7_1:+7101890 Msa1007560:CDS
GGACATTCATATGCATATCT+TGG 0.394910 7_1:+7104244 Msa1007560:CDS
ACCGTTTCACAGAACGGAAC+CGG 0.404772 7_1:+7100639 Msa1007560:CDS
CTCTCGCCGGACTGTCATCC+GGG 0.409358 7_1:+7100710 Msa1007560:CDS
ACTGGCTGCTTATAGATTCC+AGG 0.412027 7_1:-7100738 None:intergenic
GTGATTGGAACTGGGACGTT+TGG 0.414318 7_1:+7101899 Msa1007560:CDS
TTGAAAGATTGCTATGTTGA+AGG 0.415692 7_1:+7103488 Msa1007560:CDS
GATTTATTGTTTGAGACAAA+TGG 0.418300 7_1:-7100491 None:intergenic
TCACTACCGCACAATATTGC+AGG 0.422962 7_1:-7105372 None:intergenic
CATTGCAGATGTGTTATAAC+AGG 0.425498 7_1:+7104214 Msa1007560:intron
TCCGGTTCCGTTCTGTGAAA+CGG 0.431791 7_1:-7100640 None:intergenic
CATATCCACTGCAAGTCTGC+AGG 0.435769 7_1:+7103560 Msa1007560:CDS
GGAAGTGTGGATTTCATCTT+CGG 0.436892 7_1:+7103509 Msa1007560:CDS
ATAAATTAATAAAGGGTTCA+GGG 0.437721 7_1:-7105511 None:intergenic
ATCTTGGCTTGCTCAAAGAA+TGG 0.443117 7_1:+7105036 Msa1007560:CDS
TTGCTCAAAGAATGGGTTTG+AGG 0.447737 7_1:+7105044 Msa1007560:CDS
AAATAAAATAAATTAATAAA+GGG 0.448268 7_1:-7105518 None:intergenic
TGTCTTTGCATACACTTACA+TGG 0.454323 7_1:+7104294 Msa1007560:CDS
ATCCAGAACCAGATAGATCT+TGG 0.455442 7_1:+7105020 Msa1007560:CDS
TTGCACCGTTTGAAAATCTC+CGG 0.457171 7_1:-7100658 None:intergenic
AGCAAATTGGTGTAGAGAAC+TGG 0.458026 7_1:+7104955 Msa1007560:CDS
ACAAGTTGGCTGGGATAACT+GGG 0.459654 7_1:+7104330 Msa1007560:CDS
TCTTGGCTTGCTCAAAGAAT+GGG 0.463869 7_1:+7105037 Msa1007560:CDS
TGATCTATGTACATTGGTAT+TGG 0.463960 7_1:+7105487 Msa1007560:three_prime_UTR
TTGTAGGTTCCTTGGATGGC+AGG 0.473136 7_1:+7102910 Msa1007560:CDS
GTGAGGATACTGTGCTTACT+TGG 0.476074 7_1:+7100808 Msa1007560:CDS
AAGGAACCTACAATTGTAGA+AGG 0.478928 7_1:-7102900 None:intergenic
AAATCATCGCAGGAAGCAAC+TGG 0.482057 7_1:+7103605 Msa1007560:CDS
TGCATATCTTGGACGACCAT+GGG 0.485305 7_1:+7104255 Msa1007560:CDS
AGAATTTCATCACTCTTGCT+GGG 0.497993 7_1:+7100778 Msa1007560:CDS
TGGAAGTACCATTGTGGAAG+GGG 0.498792 7_1:+7101925 Msa1007560:CDS
CGTGTGTAAGACAAGTTGGC+TGG 0.498941 7_1:+7104320 Msa1007560:CDS
TTTCCGGCAGGGTTCAGGAC+AGG 0.503742 7_1:+7102844 Msa1007560:intron
CCCGAACAGAGCAGAAGAGT+TGG 0.519146 7_1:+7100411 None:intergenic
CCAGTTCCAATCACCCTAGC+AGG 0.525758 7_1:-7101890 None:intergenic
GAGACACCCGGATGACAGTC+CGG 0.527393 7_1:-7100716 None:intergenic
TTACAGAGAAGGAAAATAGA+TGG 0.533764 7_1:+7105238 Msa1007560:three_prime_UTR
AGATGTGTTATAACAGGTAA+TGG 0.535089 7_1:+7104220 Msa1007560:intron
GCGAGAGTTACCGAGGGGTA+CGG 0.536791 7_1:-7100694 None:intergenic
GGAACTGGGACGTTTGGTTG+TGG 0.537408 7_1:+7101905 Msa1007560:CDS
CGATTTGATGGACAGCAACC+AGG 0.542857 7_1:-7104932 None:intergenic
GCAAAGACAACCCTTCCAAA+AGG 0.544112 7_1:-7104280 None:intergenic
GTTTAGAGTCATTACAGAGA+AGG 0.550282 7_1:+7105227 Msa1007560:three_prime_UTR
ACAATTGTAGGTTCCTTGGA+TGG 0.551660 7_1:+7102906 Msa1007560:CDS
TACCCCTCGGTAACTCTCGC+CGG 0.553340 7_1:+7100697 Msa1007560:CDS
GCAGGGTTCAGGACAGGCAG+TGG 0.559283 7_1:+7102850 Msa1007560:intron
TCTGGTTCTGGATCGATGAA+AGG 0.560073 7_1:-7105010 None:intergenic
ATGCATATCTTGGACGACCA+TGG 0.560477 7_1:+7104254 Msa1007560:CDS
CTGCTAGGGTGATTGGAACT+GGG 0.568123 7_1:+7101891 Msa1007560:CDS
TTATGTTGATCTATGTACAT+TGG 0.569670 7_1:+7105481 Msa1007560:three_prime_UTR
CAACTGGTTATGTATTCTTG+AGG 0.582694 7_1:+7103621 Msa1007560:CDS
ATATCCACTGCAAGTCTGCA+GGG 0.587199 7_1:+7103561 Msa1007560:CDS
TTGCTATGTTGAAGGAAGTG+TGG 0.589879 7_1:+7103496 Msa1007560:CDS
TATAGATTCCAGGAGACACC+CGG 0.591153 7_1:-7100728 None:intergenic
GATGAAACATGAATCAGTTG+AGG 0.592672 7_1:+7105111 Msa1007560:three_prime_UTR
TGAACCCTGCAGACTTGCAG+TGG 0.596152 7_1:-7103565 None:intergenic
CTGGAGTTACCTGCCATCCA+AGG 0.599000 7_1:-7102919 None:intergenic
TGTGGAAGTACCATTGTGGA+AGG 0.603430 7_1:+7101923 Msa1007560:CDS
GATCCGTGTGTAAGACAAGT+TGG 0.604656 7_1:+7104316 Msa1007560:CDS
CACTACCGCACAATATTGCA+GGG 0.605169 7_1:-7105371 None:intergenic
GTGTGTAAGACAAGTTGGCT+GGG 0.607583 7_1:+7104321 Msa1007560:CDS
GCAATCGACGCCGTACCCCT+CGG 0.608157 7_1:+7100684 Msa1007560:CDS
ACCCTTCCAAAAGGTCCCCA+TGG 0.611078 7_1:-7104271 None:intergenic
GACACACTGTATTTACACTA+CGG 0.615084 7_1:+7103455 Msa1007560:CDS
GTGGAAGTACCATTGTGGAA+GGG 0.617902 7_1:+7101924 Msa1007560:CDS
ACAGAGTAGAAAATCATCGC+AGG 0.619179 7_1:+7103595 Msa1007560:CDS
TGACTCTAAACATTGATACA+TGG 0.620435 7_1:-7105215 None:intergenic
TCTTGCTGGGTTGTGTCGTG+AGG 0.627214 7_1:+7100791 Msa1007560:CDS
CAGTCCGGCGAGAGTTACCG+AGG 0.638147 7_1:-7100701 None:intergenic
CAGCCAACTTGTCTTACACA+CGG 0.640543 7_1:-7104319 None:intergenic
TTCGTCTTAGGAACATACAC+TGG 0.642060 7_1:-7100756 None:intergenic
GCATATCTTGGACGACCATG+GGG 0.645401 7_1:+7104256 Msa1007560:CDS
GTATACACCGTTTCACAGAA+CGG 0.651544 7_1:+7100633 Msa1007560:CDS
AAATACCCTGCAATATTGTG+CGG 0.652156 7_1:+7105366 Msa1007560:three_prime_UTR
TCAGTTGAGGAAATGCTCGA+TGG 0.655434 7_1:+7105124 Msa1007560:three_prime_UTR
AAGTACCATTGTGGAAGGGG+AGG 0.656420 7_1:+7101928 Msa1007560:CDS
TGTGTTATAACAGGTAATGG+AGG 0.662155 7_1:+7104223 Msa1007560:CDS
AAAGTCCTCCCCTTCCACAA+TGG 0.668810 7_1:-7101933 None:intergenic
AAATTGGTGTAGAGAACTGG+TGG 0.684406 7_1:+7104958 Msa1007560:CDS
ATACATGGATCATAAAGACA+TGG 0.691866 7_1:-7105200 None:intergenic
AGTCCGGCGAGAGTTACCGA+GGG 0.700217 7_1:-7100700 None:intergenic
AAGTTGGCTGGGATAACTGG+GGG 0.713469 7_1:+7104332 Msa1007560:CDS
CAAGTTGGCTGGGATAACTG+GGG 0.717032 7_1:+7104331 Msa1007560:CDS
TGGTTGTGGAAGTACCATTG+TGG 0.723345 7_1:+7101919 Msa1007560:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAATAAAATAAATTAATAAA+GGG - chr7_1:7105521-7105540 None:intergenic 0.0%
!! AAAATAAAATAAATTAATAA+AGG - chr7_1:7105522-7105541 None:intergenic 0.0%
!!! ATTAAGTTTATAATGTTTTT+TGG + chr7_1:7101233-7101252 Msa1007560:intron 10.0%
!!! TTTTGGAATATTAATAATAT+GGG + chr7_1:7101669-7101688 Msa1007560:intron 10.0%
!! GAATATATTAAAAAATGTAT+TGG + chr7_1:7103085-7103104 Msa1007560:intron 10.0%
!! TTGGATTAAAAATAGAAAAA+CGG + chr7_1:7100430-7100449 Msa1007560:five_prime_UTR 15.0%
!!! TAATTTTCTCAAATTATTAG+CGG + chr7_1:7101370-7101389 Msa1007560:intron 15.0%
!!! CTTTTGGAATATTAATAATA+TGG + chr7_1:7101668-7101687 Msa1007560:intron 15.0%
!!! TTTGGAATATTAATAATATG+GGG + chr7_1:7101670-7101689 Msa1007560:intron 15.0%
!! TAAACTAATACATCAATATA+GGG - chr7_1:7102958-7102977 None:intergenic 15.0%
!! ATAAACTAATACATCAATAT+AGG - chr7_1:7102959-7102978 None:intergenic 15.0%
!! ATTGCTAATAATTTGAAAAA+TGG - chr7_1:7103317-7103336 None:intergenic 15.0%
!! ATATTTGGAAAAGTAATAAA+TGG + chr7_1:7103987-7104006 Msa1007560:intron 15.0%
!!! ATTTTTGTTATAGAAAGTAA+AGG + chr7_1:7104788-7104807 Msa1007560:intron 15.0%
!!! TTCTTTGTGTTTTAATCATT+TGG + chr7_1:7100877-7100896 Msa1007560:intron 20.0%
!!! TCTTTGTGTTTTAATCATTT+GGG + chr7_1:7100878-7100897 Msa1007560:intron 20.0%
!! TACAATTTCAATTACCAATT+TGG - chr7_1:7101106-7101125 None:intergenic 20.0%
!!! ATTGGTAATTGAAATTGTAT+AGG + chr7_1:7101107-7101126 Msa1007560:intron 20.0%
!! TTAATATTCCAAAAGATCTA+TGG - chr7_1:7101663-7101682 None:intergenic 20.0%
!!! TTCATGTCTGAATTTTTTTT+TGG + chr7_1:7101840-7101859 Msa1007560:intron 20.0%
!!! TCATGTCTGAATTTTTTTTT+GGG + chr7_1:7101841-7101860 Msa1007560:intron 20.0%
!! AAATGTACACTCATATATTT+AGG + chr7_1:7102225-7102244 Msa1007560:intron 20.0%
!! AGTTTAATGTTGTAATTTAG+AGG - chr7_1:7102287-7102306 None:intergenic 20.0%
!! TGAAAAACAAGTGTTATATT+AGG - chr7_1:7102819-7102838 None:intergenic 20.0%
!! AAACTAATACATCAATATAG+GGG - chr7_1:7102957-7102976 None:intergenic 20.0%
!!! ATTGATGTATTAGTTTATGT+AGG + chr7_1:7102961-7102980 Msa1007560:intron 20.0%
!! AAGAAAAACTTATTCTATGA+AGG - chr7_1:7103063-7103082 None:intergenic 20.0%
!! AATAATTTGAAAAATGGAAG+TGG - chr7_1:7103311-7103330 None:intergenic 20.0%
!! TAGAATTTAAACAGAATCTA+GGG - chr7_1:7103389-7103408 None:intergenic 20.0%
!! ATAGAATTTAAACAGAATCT+AGG - chr7_1:7103390-7103409 None:intergenic 20.0%
!! TAGATTCTGTTTAAATTCTA+TGG + chr7_1:7103389-7103408 Msa1007560:intron 20.0%
!! TCATGAGAAAACTAATTATT+TGG - chr7_1:7103424-7103443 None:intergenic 20.0%
!! TAAATCTAACAACTAAAACA+CGG - chr7_1:7103697-7103716 None:intergenic 20.0%
!! ATTGAAAATATGAGGTATAT+AGG - chr7_1:7103759-7103778 None:intergenic 20.0%
!! GAAGTTATATTTAGGAATAA+AGG + chr7_1:7104065-7104084 Msa1007560:intron 20.0%
!! TTATATTTAGGAATAAAGGT+AGG + chr7_1:7104069-7104088 Msa1007560:intron 20.0%
!! AAATACTTTAATGAACCAAA+AGG - chr7_1:7104171-7104190 None:intergenic 20.0%
!! AATCATAAAACATTACAGAA+TGG - chr7_1:7104420-7104439 None:intergenic 20.0%
!! ATTCAAATCCTATATTCTTA+AGG + chr7_1:7104584-7104603 Msa1007560:intron 20.0%
!! TATAAACTGAATACAACTTA+TGG - chr7_1:7104701-7104720 None:intergenic 20.0%
!! ATAAATTAATAAAGGGTTCA+GGG - chr7_1:7105514-7105533 None:intergenic 20.0%
!! AATAAATTAATAAAGGGTTC+AGG - chr7_1:7105515-7105534 None:intergenic 20.0%
!! GATTTATTGTTTGAGACAAA+TGG - chr7_1:7100494-7100513 None:intergenic 25.0%
!!! TTTGGAGAAGAAAGTTTTAT+GGG - chr7_1:7100600-7100619 None:intergenic 25.0%
!!! TTTTGGAGAAGAAAGTTTTA+TGG - chr7_1:7100601-7100620 None:intergenic 25.0%
! AAAACTTTCTTCTCCAAAAA+TGG + chr7_1:7100602-7100621 Msa1007560:exon 25.0%
!!! CTTTGTGTTTTAATCATTTG+GGG + chr7_1:7100879-7100898 Msa1007560:intron 25.0%
!!! TTTTAATCATTTGGGGTAAT+GGG + chr7_1:7100886-7100905 Msa1007560:intron 25.0%
! TTGAACATAATCTGATATGT+CGG + chr7_1:7101021-7101040 Msa1007560:intron 25.0%
!! TGCAACTTCATGAATTATTT+TGG - chr7_1:7101168-7101187 None:intergenic 25.0%
! TTGATGAAATATTCAGAATG+AGG + chr7_1:7101611-7101630 Msa1007560:intron 25.0%
! TGATGAAATATTCAGAATGA+GGG + chr7_1:7101612-7101631 Msa1007560:intron 25.0%
! ATATTAATAATATGGGGACT+AGG + chr7_1:7101676-7101695 Msa1007560:intron 25.0%
! TACAATTTGAAGACCAATTT+GGG + chr7_1:7101711-7101730 Msa1007560:intron 25.0%
!! TTTTCAATGTTGCATCTATA+TGG + chr7_1:7101793-7101812 Msa1007560:intron 25.0%
!!! CATGTCTGAATTTTTTTTTG+GGG + chr7_1:7101842-7101861 Msa1007560:intron 25.0%
!!! ATGTCTGAATTTTTTTTTGG+GGG + chr7_1:7101843-7101862 Msa1007560:intron 25.0%
!! AATGAGATTGTATCTAAGAT+CGG + chr7_1:7102142-7102161 Msa1007560:intron 25.0%
! AATATAAGATCCTACCAATT+GGG + chr7_1:7102201-7102220 Msa1007560:intron 25.0%
! TGCATTAAAATTATCGTAGT+TGG + chr7_1:7102252-7102271 Msa1007560:intron 25.0%
! TGATTACTTGTAAGATTATG+TGG + chr7_1:7102336-7102355 Msa1007560:intron 25.0%
! TTACAAATGTAGCATATGTT+TGG + chr7_1:7102442-7102461 Msa1007560:intron 25.0%
! TTGAAGCTTCAATAAAATTG+CGG + chr7_1:7102525-7102544 Msa1007560:intron 25.0%
! ATAAATACTGCATAAATGTC+TGG - chr7_1:7102574-7102593 None:intergenic 25.0%
! TGAGAGAACAATGTTAAATT+TGG + chr7_1:7102595-7102614 Msa1007560:intron 25.0%
!!! TTTGGAACTTTTCCATAAAT+AGG + chr7_1:7102613-7102632 Msa1007560:intron 25.0%
!! TTGGAACTTTTCCATAAATA+GGG + chr7_1:7102614-7102633 Msa1007560:intron 25.0%
!! GTAAATTCATTACATGGTTT+TGG + chr7_1:7102708-7102727 Msa1007560:intron 25.0%
! GATTGGAGTATATATGTATA+AGG - chr7_1:7102742-7102761 None:intergenic 25.0%
! ATCAAACTCATTAATCTGAT+TGG - chr7_1:7102759-7102778 None:intergenic 25.0%
! AATCAGATTAATGAGTTTGA+TGG + chr7_1:7102758-7102777 Msa1007560:intron 25.0%
! ATGGAACAAAATTTATATCC+AGG + chr7_1:7102777-7102796 Msa1007560:intron 25.0%
! AACTAATACATCAATATAGG+GGG - chr7_1:7102956-7102975 None:intergenic 25.0%
! TGGTTAAGTGATATATTTGT+TGG + chr7_1:7103105-7103124 Msa1007560:intron 25.0%
! GGTTAAGTGATATATTTGTT+GGG + chr7_1:7103106-7103125 Msa1007560:intron 25.0%
! ATTATTATTCTTGAGACAAC+AGG - chr7_1:7103169-7103188 None:intergenic 25.0%
! GAGAAAACTAATTATTTGGT+TGG - chr7_1:7103420-7103439 None:intergenic 25.0%
! TGTGTTGAATTGAAAATATG+AGG - chr7_1:7103767-7103786 None:intergenic 25.0%
! TAGTATTATGATGTTATGAG+TGG + chr7_1:7103963-7103982 Msa1007560:intron 25.0%
! TTGAAACAAGGCTTATATTT+AGG + chr7_1:7104020-7104039 Msa1007560:intron 25.0%
! TGAAACAAGGCTTATATTTA+GGG + chr7_1:7104021-7104040 Msa1007560:intron 25.0%
!!! GACAATTTTTTCTTTCCAAA+AGG + chr7_1:7104043-7104062 Msa1007560:intron 25.0%
! TCCAAAAGGAAGTTATATTT+AGG + chr7_1:7104057-7104076 Msa1007560:intron 25.0%
!! TCCTAAATATAACTTCCTTT+TGG - chr7_1:7104061-7104080 None:intergenic 25.0%
!!! TAAAGTATTTTACAACTGAG+TGG + chr7_1:7104181-7104200 Msa1007560:intron 25.0%
! AATATAACCTCCATTCATAA+TGG - chr7_1:7104447-7104466 None:intergenic 25.0%
!! GATTATGCTAGAAATTTTCA+TGG + chr7_1:7104522-7104541 Msa1007560:intron 25.0%
! TCAAATAAACCAATCAAAAG+AGG - chr7_1:7104634-7104653 None:intergenic 25.0%
!! TTACGAGATAAATTTTGCAT+AGG - chr7_1:7104861-7104880 None:intergenic 25.0%
! AAGAAATCTCATACAGAAAA+AGG - chr7_1:7105152-7105171 None:intergenic 25.0%
! TTATGTTGATCTATGTACAT+TGG + chr7_1:7105481-7105500 Msa1007560:three_prime_UTR 25.0%
!!! ACGAATCTTTTGTTGTTTGT+AGG - chr7_1:7100527-7100546 None:intergenic 30.0%
!!! TTTTATGGGTTTGGTGTTAA+TGG - chr7_1:7100586-7100605 None:intergenic 30.0%
!! AGAAGAAAGTTTTATGGGTT+TGG - chr7_1:7100595-7100614 None:intergenic 30.0%
!! GTTTTAATCATTTGGGGTAA+TGG + chr7_1:7100885-7100904 Msa1007560:intron 30.0%
AGGTAACTAAGATCCATTTA+AGG + chr7_1:7101462-7101481 Msa1007560:intron 30.0%
GGTAACTAAGATCCATTTAA+GGG + chr7_1:7101463-7101482 Msa1007560:intron 30.0%
GTAACTAAGATCCATTTAAG+GGG + chr7_1:7101464-7101483 Msa1007560:intron 30.0%
! GGAAAAACATTTGTTGAAAG+AGG - chr7_1:7101494-7101513 None:intergenic 30.0%
! AAATGTTTTTCCATACGCAT+TGG + chr7_1:7101502-7101521 Msa1007560:intron 30.0%
! TTGCAATTCCATAGATCTTT+TGG + chr7_1:7101652-7101671 Msa1007560:intron 30.0%
!! CAAATTGGTCTTCAAATTGT+AGG - chr7_1:7101712-7101731 None:intergenic 30.0%
CTACAATTTGAAGACCAATT+TGG + chr7_1:7101710-7101729 Msa1007560:intron 30.0%
! ACTCGATGTTTTCTTCATTT+GGG + chr7_1:7101739-7101758 Msa1007560:intron 30.0%
!!! ATTTTTTTTTGGGGGTGTTA+TGG + chr7_1:7101851-7101870 Msa1007560:intron 30.0%
! AAGTAAACAAGTGATGGAAA+AGG - chr7_1:7102054-7102073 None:intergenic 30.0%
TTTACTTTGCTGAATGGTAT+TGG + chr7_1:7102067-7102086 Msa1007560:intron 30.0%
! ATTGTATCTAAGATCGGAAA+GGG + chr7_1:7102148-7102167 Msa1007560:intron 30.0%
GAATATAAGATCCTACCAAT+TGG + chr7_1:7102200-7102219 Msa1007560:intron 30.0%
! CTTTTCCATAAATAGGGATT+TGG + chr7_1:7102620-7102639 Msa1007560:intron 30.0%
GGATCTATATCTTAAGCAAT+CGG - chr7_1:7102651-7102670 None:intergenic 30.0%
CTGTGTGTAAATTCATTACA+TGG + chr7_1:7102702-7102721 Msa1007560:intron 30.0%
!! CTTGTTTTTCATTCTCTTTC+CGG + chr7_1:7102828-7102847 Msa1007560:intron 30.0%
! TTTTCTCATGACTATTGTAC+AGG + chr7_1:7103433-7103452 Msa1007560:intron 30.0%
TTGAAAGATTGCTATGTTGA+AGG + chr7_1:7103488-7103507 Msa1007560:CDS 30.0%
ATGAGATTGTTAACAATGGA+TGG - chr7_1:7103661-7103680 None:intergenic 30.0%
GTAGATGAGATTGTTAACAA+TGG - chr7_1:7103665-7103684 None:intergenic 30.0%
!! ATTGCTACTTTGTTATACCA+TGG + chr7_1:7103834-7103853 Msa1007560:intron 30.0%
! TTCGGATTTTATGATTGTGT+TGG + chr7_1:7103894-7103913 Msa1007560:intron 30.0%
GATGTTATGAGTGGTATATT+TGG + chr7_1:7103972-7103991 Msa1007560:intron 30.0%
ATAACATAAGGAAAGAATCC+CGG - chr7_1:7104145-7104164 None:intergenic 30.0%
AGATGTGTTATAACAGGTAA+TGG + chr7_1:7104220-7104239 Msa1007560:intron 30.0%
ATGATTCACACCATTATGAA+TGG + chr7_1:7104434-7104453 Msa1007560:intron 30.0%
GATCAATGCCTTAAGAATAT+AGG - chr7_1:7104595-7104614 None:intergenic 30.0%
TATATTTGCATTAACTGACC+AGG + chr7_1:7104717-7104736 Msa1007560:intron 30.0%
ACCAGGATAACTTAAGAAAA+CGG + chr7_1:7104734-7104753 Msa1007560:intron 30.0%
! GAGTCAAATTGTTTTCGTAT+CGG - chr7_1:7104760-7104779 None:intergenic 30.0%
TAGAAAGTAAAGGTTGTAGT+TGG + chr7_1:7104798-7104817 Msa1007560:intron 30.0%
AGAAAGTAAAGGTTGTAGTT+GGG + chr7_1:7104799-7104818 Msa1007560:intron 30.0%
ATACATGGATCATAAAGACA+TGG - chr7_1:7105203-7105222 None:intergenic 30.0%
TGACTCTAAACATTGATACA+TGG - chr7_1:7105218-7105237 None:intergenic 30.0%
TTACAGAGAAGGAAAATAGA+TGG + chr7_1:7105238-7105257 Msa1007560:three_prime_UTR 30.0%
TGATCTATGTACATTGGTAT+TGG + chr7_1:7105487-7105506 Msa1007560:three_prime_UTR 30.0%
!! GGTTTGGTGTTAATGGAAAA+TGG - chr7_1:7100579-7100598 None:intergenic 35.0%
!!! TATACACATGCTGCCATTTT+TGG - chr7_1:7100618-7100637 None:intergenic 35.0%
GTGATGAAATTCTTCGTCTT+AGG - chr7_1:7100771-7100790 None:intergenic 35.0%
AAGAATTTCATCACTCTTGC+TGG + chr7_1:7100777-7100796 Msa1007560:CDS 35.0%
AGAATTTCATCACTCTTGCT+GGG + chr7_1:7100778-7100797 Msa1007560:CDS 35.0%
GACACTTACTCAGAAAACAT+TGG - chr7_1:7101084-7101103 None:intergenic 35.0%
TTCTGAGTAAGTGTCCAAAT+TGG + chr7_1:7101089-7101108 Msa1007560:intron 35.0%
AAATTGTCGCTCTGTTTGTA+GGG + chr7_1:7101199-7101218 Msa1007560:intron 35.0%
TCTCAAATTATTAGCGGTGT+CGG + chr7_1:7101376-7101395 Msa1007560:intron 35.0%
ATGGATCTTAGTTACCTTGA+GGG - chr7_1:7101459-7101478 None:intergenic 35.0%
AATGGATCTTAGTTACCTTG+AGG - chr7_1:7101460-7101479 None:intergenic 35.0%
! TCTCTAACCATTTTGTCCAT+GGG - chr7_1:7101539-7101558 None:intergenic 35.0%
! ATCTCTAACCATTTTGTCCA+TGG - chr7_1:7101540-7101559 None:intergenic 35.0%
CAAATGAAGAAAACATCGAG+TGG - chr7_1:7101740-7101759 None:intergenic 35.0%
! CACTCGATGTTTTCTTCATT+TGG + chr7_1:7101738-7101757 Msa1007560:intron 35.0%
! CTCGATGTTTTCTTCATTTG+GGG + chr7_1:7101740-7101759 Msa1007560:intron 35.0%
!! TTTTCTTCATTTGGGGTAGT+GGG + chr7_1:7101747-7101766 Msa1007560:intron 35.0%
TTGCATCTATATGGTTTAGC+TGG + chr7_1:7101802-7101821 Msa1007560:intron 35.0%
TTAGCTGGTATGTGTCAAAA+TGG + chr7_1:7101817-7101836 Msa1007560:intron 35.0%
TCAGCAAAGTAAACAAGTGA+TGG - chr7_1:7102060-7102079 None:intergenic 35.0%
CACTTGTTTACTTTGCTGAA+TGG + chr7_1:7102061-7102080 Msa1007560:intron 35.0%
! GATTGTATCTAAGATCGGAA+AGG + chr7_1:7102147-7102166 Msa1007560:intron 35.0%
! TGTACATTTTCCCAATTGGT+AGG - chr7_1:7102214-7102233 None:intergenic 35.0%
! TGAGTGTACATTTTCCCAAT+TGG - chr7_1:7102218-7102237 None:intergenic 35.0%
!! ATCAGTTCTCTGAGATTTAG+AGG - chr7_1:7102320-7102339 None:intergenic 35.0%
TAGTCGACATAGTGATAGTT+GGG + chr7_1:7102404-7102423 Msa1007560:intron 35.0%
GTAGCATATGTTTGGTATTG+CGG + chr7_1:7102450-7102469 Msa1007560:intron 35.0%
!!! CTAAGCTTTTTAAGTCAACG+TGG - chr7_1:7102503-7102522 None:intergenic 35.0%
AAGCTTCAATAAAATTGCGG+TGG + chr7_1:7102528-7102547 Msa1007560:intron 35.0%
CAATAAAATTGCGGTGGAAA+TGG + chr7_1:7102534-7102553 Msa1007560:intron 35.0%
CAGATCCAAATCCCTATTTA+TGG - chr7_1:7102628-7102647 None:intergenic 35.0%
GACAACAGACTTAATGTCAA+TGG - chr7_1:7102672-7102691 None:intergenic 35.0%
AAGGAACCTACAATTGTAGA+AGG - chr7_1:7102903-7102922 None:intergenic 35.0%
TTCTACAATTGTAGGTTCCT+TGG + chr7_1:7102902-7102921 Msa1007560:CDS 35.0%
ACATCAATATAGGGGGAAAA+TGG - chr7_1:7102949-7102968 None:intergenic 35.0%
!! ACATAAGACCAACTAGTCTT+CGG - chr7_1:7103218-7103237 None:intergenic 35.0%
TTGAATGTAACCACATGTGT+CGG - chr7_1:7103288-7103307 None:intergenic 35.0%
TTGTTGTCGTGTCTGATATA+CGG + chr7_1:7103352-7103371 Msa1007560:intron 35.0%
GACACACTGTATTTACACTA+CGG + chr7_1:7103455-7103474 Msa1007560:CDS 35.0%
CAACTGGTTATGTATTCTTG+AGG + chr7_1:7103621-7103640 Msa1007560:CDS 35.0%
AACAACTAAAACACGGTGAT+GGG - chr7_1:7103690-7103709 None:intergenic 35.0%
TAACAACTAAAACACGGTGA+TGG - chr7_1:7103691-7103710 None:intergenic 35.0%
TTCTTAAGCTGTCTCTGATA+TGG + chr7_1:7103721-7103740 Msa1007560:intron 35.0%
ACTTCTACCACAAACAATGA+GGG - chr7_1:7103870-7103889 None:intergenic 35.0%
TACTTCTACCACAAACAATG+AGG - chr7_1:7103871-7103890 None:intergenic 35.0%
CATTGTTTGTGGTAGAAGTA+TGG + chr7_1:7103871-7103890 Msa1007560:intron 35.0%
! TTTGTGGTAGAAGTATGGTT+CGG + chr7_1:7103876-7103895 Msa1007560:intron 35.0%
!! GGTTCTAGAACTTTGAAACA+AGG + chr7_1:7104008-7104027 Msa1007560:intron 35.0%
GGGATTCTTTCCTTATGTTA+TGG + chr7_1:7104144-7104163 Msa1007560:intron 35.0%
! TCCTTATGTTATGGACCTTT+TGG + chr7_1:7104153-7104172 Msa1007560:intron 35.0%
ACCAAAAGGTCCATAACATA+AGG - chr7_1:7104157-7104176 None:intergenic 35.0%
! TTTTACAACTGAGTGGTTTC+CGG + chr7_1:7104188-7104207 Msa1007560:intron 35.0%
CTGTTATAACACATCTGCAA+TGG - chr7_1:7104216-7104235 None:intergenic 35.0%
CATTGCAGATGTGTTATAAC+AGG + chr7_1:7104214-7104233 Msa1007560:intron 35.0%
! TGTGTTATAACAGGTAATGG+AGG + chr7_1:7104223-7104242 Msa1007560:CDS 35.0%
GGACATTCATATGCATATCT+TGG + chr7_1:7104244-7104263 Msa1007560:CDS 35.0%
TGTCTTTGCATACACTTACA+TGG + chr7_1:7104294-7104313 Msa1007560:CDS 35.0%
!! GTGCTTGCTTTTATGAATAC+AGG + chr7_1:7104374-7104393 Msa1007560:CDS 35.0%
ATTCACACCATTATGAATGG+AGG + chr7_1:7104437-7104456 Msa1007560:intron 35.0%
AAAAGTAGCACTTTGCTTAG+TGG - chr7_1:7104561-7104580 None:intergenic 35.0%
! ATTGATCCCCAGAGTATTAA+GGG + chr7_1:7104608-7104627 Msa1007560:intron 35.0%
! TATTAAGGGCCTCTTTTGAT+TGG + chr7_1:7104622-7104641 Msa1007560:intron 35.0%
GAAAGTAAAGGTTGTAGTTG+GGG + chr7_1:7104800-7104819 Msa1007560:intron 35.0%
AAAGTAAAGGTTGTAGTTGG+GGG + chr7_1:7104801-7104820 Msa1007560:intron 35.0%
GATGAAACATGAATCAGTTG+AGG + chr7_1:7105111-7105130 Msa1007560:three_prime_UTR 35.0%
! GTTTAGAGTCATTACAGAGA+AGG + chr7_1:7105227-7105246 Msa1007560:three_prime_UTR 35.0%
AAATACCCTGCAATATTGTG+CGG + chr7_1:7105366-7105385 Msa1007560:three_prime_UTR 35.0%
GTATACACCGTTTCACAGAA+CGG + chr7_1:7100633-7100652 Msa1007560:CDS 40.0%
TTGCACCGTTTGAAAATCTC+CGG - chr7_1:7100661-7100680 None:intergenic 40.0%
TTCGTCTTAGGAACATACAC+TGG - chr7_1:7100759-7100778 None:intergenic 40.0%
CAAATTGTCGCTCTGTTTGT+AGG + chr7_1:7101198-7101217 Msa1007560:intron 40.0%
!! GGATTAGTCAGTATGAAGCA+CGG - chr7_1:7101437-7101456 None:intergenic 40.0%
TGGATCTTAGTTACCTTGAG+GGG - chr7_1:7101458-7101477 None:intergenic 40.0%
AAAGAGGTCAACCCCTTAAA+TGG - chr7_1:7101478-7101497 None:intergenic 40.0%
!! TTTTTCCATACGCATTGGTC+AGG + chr7_1:7101507-7101526 Msa1007560:intron 40.0%
!! GTTTTCTTCATTTGGGGTAG+TGG + chr7_1:7101746-7101765 Msa1007560:intron 40.0%
!!! TTTTTTTGGGGGTGTTATGG+TGG + chr7_1:7101854-7101873 Msa1007560:intron 40.0%
! ATTTTTGTTGCAGCCTGCTA+GGG + chr7_1:7101877-7101896 Msa1007560:intron 40.0%
AATTTCACGTGCATTACCTC+AGG - chr7_1:7101992-7102011 None:intergenic 40.0%
AAACGTGCATAAGTGTGTGT+TGG + chr7_1:7102096-7102115 Msa1007560:intron 40.0%
GTAGTCGACATAGTGATAGT+TGG + chr7_1:7102403-7102422 Msa1007560:intron 40.0%
AAATTGCGGTGGAAATGGTT+TGG + chr7_1:7102539-7102558 Msa1007560:intron 40.0%
AATTGCGGTGGAAATGGTTT+GGG + chr7_1:7102540-7102559 Msa1007560:intron 40.0%
! TTTTTCATTCTCTTTCCGGC+AGG + chr7_1:7102832-7102851 Msa1007560:intron 40.0%
! TTTTCATTCTCTTTCCGGCA+GGG + chr7_1:7102833-7102852 Msa1007560:intron 40.0%
GATGTGCCTTCTACAATTGT+AGG + chr7_1:7102894-7102913 Msa1007560:CDS 40.0%
ACAATTGTAGGTTCCTTGGA+TGG + chr7_1:7102906-7102925 Msa1007560:CDS 40.0%
TTGCTATGTTGAAGGAAGTG+TGG + chr7_1:7103496-7103515 Msa1007560:CDS 40.0%
! GGAAGTGTGGATTTCATCTT+CGG + chr7_1:7103509-7103528 Msa1007560:CDS 40.0%
! CGATGATTTTCTACTCTGTG+CGG - chr7_1:7103594-7103613 None:intergenic 40.0%
ACAGAGTAGAAAATCATCGC+AGG + chr7_1:7103595-7103614 Msa1007560:CDS 40.0%
AAGCTGTCTCTGATATGGAA+AGG + chr7_1:7103726-7103745 Msa1007560:intron 40.0%
AGCTGTCTCTGATATGGAAA+GGG + chr7_1:7103727-7103746 Msa1007560:intron 40.0%
!! AGAGCTCTAGAAACTAGGAA+AGG - chr7_1:7104118-7104137 None:intergenic 40.0%
!! GAACAAGAGCTCTAGAAACT+AGG - chr7_1:7104123-7104142 None:intergenic 40.0%
!! AGTTTCTAGAGCTCTTGTTC+CGG + chr7_1:7104123-7104142 Msa1007560:intron 40.0%
! CATTGATCCCCAGAGTATTA+AGG + chr7_1:7104607-7104626 Msa1007560:intron 40.0%
AAAGAGGCCCTTAATACTCT+GGG - chr7_1:7104618-7104637 None:intergenic 40.0%
AAAAGAGGCCCTTAATACTC+TGG - chr7_1:7104619-7104638 None:intergenic 40.0%
!! GCCGTTTTCTTAAGTTATCC+TGG - chr7_1:7104738-7104757 None:intergenic 40.0%
GTCCATCAAATCGAGCAAAT+TGG + chr7_1:7104942-7104961 Msa1007560:CDS 40.0%
! CACCAATTTGCTCGATTTGA+TGG - chr7_1:7104947-7104966 None:intergenic 40.0%
AGCAAATTGGTGTAGAGAAC+TGG + chr7_1:7104955-7104974 Msa1007560:CDS 40.0%
AAATTGGTGTAGAGAACTGG+TGG + chr7_1:7104958-7104977 Msa1007560:CDS 40.0%
ATCCAGAACCAGATAGATCT+TGG + chr7_1:7105020-7105039 Msa1007560:CDS 40.0%
!! ATCTTGGCTTGCTCAAAGAA+TGG + chr7_1:7105036-7105055 Msa1007560:CDS 40.0%
!! TCTTGGCTTGCTCAAAGAAT+GGG + chr7_1:7105037-7105056 Msa1007560:CDS 40.0%
! TTGCTCAAAGAATGGGTTTG+AGG + chr7_1:7105044-7105063 Msa1007560:CDS 40.0%
GAGCATTTCTACGCAGAATA+TGG - chr7_1:7105073-7105092 None:intergenic 40.0%
! CGGAACCGGAGATTTTCAAA+CGG + chr7_1:7100653-7100672 Msa1007560:CDS 45.0%
TATAGATTCCAGGAGACACC+CGG - chr7_1:7100731-7100750 None:intergenic 45.0%
ACTGGCTGCTTATAGATTCC+AGG - chr7_1:7100741-7100760 None:intergenic 45.0%
GTGAGGATACTGTGCTTACT+TGG + chr7_1:7100808-7100827 Msa1007560:CDS 45.0%
! ATCTGATATGTCGGTGCTCA+TGG + chr7_1:7101030-7101049 Msa1007560:intron 45.0%
! TCTGATATGTCGGTGCTCAT+GGG + chr7_1:7101031-7101050 Msa1007560:intron 45.0%
GATGAAGCACATACACTCCT+CGG + chr7_1:7101293-7101312 Msa1007560:intron 45.0%
ATGAAGCACATACACTCCTC+GGG + chr7_1:7101294-7101313 Msa1007560:intron 45.0%
GTCAGTATGAAGCACGGATA+CGG - chr7_1:7101431-7101450 None:intergenic 45.0%
! CATACTGACTAATCCCCTCA+AGG + chr7_1:7101442-7101461 Msa1007560:intron 45.0%
GCATCAACCCATGGACAAAA+TGG + chr7_1:7101529-7101548 Msa1007560:intron 45.0%
CATCGAGTGGATACCCAAAT+TGG - chr7_1:7101727-7101746 None:intergenic 45.0%
! GATTTTTGTTGCAGCCTGCT+AGG + chr7_1:7101876-7101895 Msa1007560:intron 45.0%
!! TGGTTGTGGAAGTACCATTG+TGG + chr7_1:7101919-7101938 Msa1007560:CDS 45.0%
!! TGTGGAAGTACCATTGTGGA+AGG + chr7_1:7101923-7101942 Msa1007560:CDS 45.0%
!! GTGGAAGTACCATTGTGGAA+GGG + chr7_1:7101924-7101943 Msa1007560:CDS 45.0%
!! TGGAAGTACCATTGTGGAAG+GGG + chr7_1:7101925-7101944 Msa1007560:CDS 45.0%
!! TTTTGAGAACTCTGCACCTG+AGG + chr7_1:7101973-7101992 Msa1007560:CDS 45.0%
AGGAGCAAACACGTTGGATT+TGG - chr7_1:7102024-7102043 None:intergenic 45.0%
! GTGATGGAAAAGGAACTAGC+AGG - chr7_1:7102044-7102063 None:intergenic 45.0%
TTGTAGAGTTCCCTTCCCAT+TGG + chr7_1:7102378-7102397 Msa1007560:intron 45.0%
! CTATGTCGACTACTGCCAAT+GGG - chr7_1:7102396-7102415 None:intergenic 45.0%
! ACTATGTCGACTACTGCCAA+TGG - chr7_1:7102397-7102416 None:intergenic 45.0%
CGGCACGTTTACCAAAATCA+CGG + chr7_1:7102470-7102489 Msa1007560:intron 45.0%
! GTGGCTTTTCACCGTGATTT+TGG - chr7_1:7102484-7102503 None:intergenic 45.0%
TCTTGAGACAACAGGCTAGA+AGG - chr7_1:7103161-7103180 None:intergenic 45.0%
! TTGAGACCAGTCTGAAGTGT+CGG - chr7_1:7103252-7103271 None:intergenic 45.0%
ATATCCACTGCAAGTCTGCA+GGG + chr7_1:7103561-7103580 Msa1007560:CDS 45.0%
AAATCATCGCAGGAAGCAAC+TGG + chr7_1:7103605-7103624 Msa1007560:CDS 45.0%
!! AACTAAAACACGGTGATGGG+TGG - chr7_1:7103687-7103706 None:intergenic 45.0%
CGTTCTTCCCTCATTGTTTG+TGG + chr7_1:7103860-7103879 Msa1007560:intron 45.0%
!! GTTTCTAGAGCTCTTGTTCC+GGG + chr7_1:7104124-7104143 Msa1007560:intron 45.0%
TAACACATCTGCAATGGCAC+CGG - chr7_1:7104210-7104229 None:intergenic 45.0%
ATGCATATCTTGGACGACCA+TGG + chr7_1:7104254-7104273 Msa1007560:CDS 45.0%
TGCATATCTTGGACGACCAT+GGG + chr7_1:7104255-7104274 Msa1007560:CDS 45.0%
GCAAAGACAACCCTTCCAAA+AGG - chr7_1:7104283-7104302 None:intergenic 45.0%
GATCCGTGTGTAAGACAAGT+TGG + chr7_1:7104316-7104335 Msa1007560:CDS 45.0%
CAGCCAACTTGTCTTACACA+CGG - chr7_1:7104322-7104341 None:intergenic 45.0%
! GTGTGTAAGACAAGTTGGCT+GGG + chr7_1:7104321-7104340 Msa1007560:CDS 45.0%
! ACAAGTTGGCTGGGATAACT+GGG + chr7_1:7104330-7104349 Msa1007560:CDS 45.0%
AAGAGGCCCTTAATACTCTG+GGG - chr7_1:7104617-7104636 None:intergenic 45.0%
TCAAATTCTCGTGCATCGTC+TGG + chr7_1:7104828-7104847 Msa1007560:intron 45.0%
!! TCTGGTTCTGGATCGATGAA+AGG - chr7_1:7105013-7105032 None:intergenic 45.0%
! AGCCAAGATCTATCTGGTTC+TGG - chr7_1:7105025-7105044 None:intergenic 45.0%
TGAGCAAGCCAAGATCTATC+TGG - chr7_1:7105031-7105050 None:intergenic 45.0%
TCAGTTGAGGAAATGCTCGA+TGG + chr7_1:7105124-7105143 Msa1007560:three_prime_UTR 45.0%
CACTACCGCACAATATTGCA+GGG - chr7_1:7105374-7105393 None:intergenic 45.0%
TCACTACCGCACAATATTGC+AGG - chr7_1:7105375-7105394 None:intergenic 45.0%
ACCGTTTCACAGAACGGAAC+CGG + chr7_1:7100639-7100658 Msa1007560:CDS 50.0%
TCCGGTTCCGTTCTGTGAAA+CGG - chr7_1:7100643-7100662 None:intergenic 50.0%
TTGCGGGCGGAGAATATCTT+TGG - chr7_1:7101266-7101285 None:intergenic 50.0%
TGCTTCATCAGTGCAGTTGC+GGG - chr7_1:7101282-7101301 None:intergenic 50.0%
GTGCTTCATCAGTGCAGTTG+CGG - chr7_1:7101283-7101302 None:intergenic 50.0%
TGATGCCTGACCAATGCGTA+TGG - chr7_1:7101515-7101534 None:intergenic 50.0%
ATTGGTCAGGCATCAACCCA+TGG + chr7_1:7101520-7101539 Msa1007560:intron 50.0%
CTGCTAGGGTGATTGGAACT+GGG + chr7_1:7101891-7101910 Msa1007560:CDS 50.0%
GTGATTGGAACTGGGACGTT+TGG + chr7_1:7101899-7101918 Msa1007560:CDS 50.0%
AAGTACCATTGTGGAAGGGG+AGG + chr7_1:7101928-7101947 Msa1007560:CDS 50.0%
AAAGTCCTCCCCTTCCACAA+TGG - chr7_1:7101936-7101955 None:intergenic 50.0%
ACTAGCAGGAGCAAACACGT+TGG - chr7_1:7102030-7102049 None:intergenic 50.0%
TCGACTACTGCCAATGGGAA+GGG - chr7_1:7102391-7102410 None:intergenic 50.0%
GGTACTTCACTGTTTGTGCC+TGG - chr7_1:7102798-7102817 None:intergenic 50.0%
TTGTAGGTTCCTTGGATGGC+AGG + chr7_1:7102910-7102929 Msa1007560:CDS 50.0%
ATAGGGGGAAAATGGAGCAC+TGG - chr7_1:7102941-7102960 None:intergenic 50.0%
GCTGTGATCCGAAGACTAGT+TGG + chr7_1:7103207-7103226 Msa1007560:intron 50.0%
!! TCTGAAGTGTCGGTGCTTCA+TGG - chr7_1:7103242-7103261 None:intergenic 50.0%
!! GACACTTCAGACTGGTCTCA+AGG + chr7_1:7103251-7103270 Msa1007560:intron 50.0%
! CGGCAATAGCACTGCTCTTT+TGG + chr7_1:7103529-7103548 Msa1007560:CDS 50.0%
CATATCCACTGCAAGTCTGC+AGG + chr7_1:7103560-7103579 Msa1007560:CDS 50.0%
ATGAGGGAAGAACGTTGCCA+TGG - chr7_1:7103854-7103873 None:intergenic 50.0%
GCATATCTTGGACGACCATG+GGG + chr7_1:7104256-7104275 Msa1007560:CDS 50.0%
!! ACCATGGGGACCTTTTGGAA+GGG + chr7_1:7104270-7104289 Msa1007560:CDS 50.0%
! CGTGTGTAAGACAAGTTGGC+TGG + chr7_1:7104320-7104339 Msa1007560:CDS 50.0%
! GACAAGTTGGCTGGGATAAC+TGG + chr7_1:7104329-7104348 Msa1007560:CDS 50.0%
! CAAGTTGGCTGGGATAACTG+GGG + chr7_1:7104331-7104350 Msa1007560:CDS 50.0%
AAGTTGGCTGGGATAACTGG+GGG + chr7_1:7104332-7104351 Msa1007560:CDS 50.0%
GGGGGAAAGTAGAGAATGAG+AGG + chr7_1:7104350-7104369 Msa1007560:CDS 50.0%
! CGATTTGATGGACAGCAACC+AGG - chr7_1:7104935-7104954 None:intergenic 50.0%
TCTTGCTGGGTTGTGTCGTG+AGG + chr7_1:7100791-7100810 Msa1007560:CDS 55.0%
TTCATCAGTGCAGTTGCGGG+CGG - chr7_1:7101279-7101298 None:intergenic 55.0%
GCACATACACTCCTCGGGTT+AGG + chr7_1:7101299-7101318 Msa1007560:intron 55.0%
GTCAGTGTCTGTGTCGTGTC+CGG + chr7_1:7101402-7101421 Msa1007560:intron 55.0%
TGAAGCACGGATACGGACAC+CGG - chr7_1:7101424-7101443 None:intergenic 55.0%
TTGCAGCCTGCTAGGGTGAT+TGG + chr7_1:7101884-7101903 Msa1007560:intron 55.0%
CCAGTTCCAATCACCCTAGC+AGG - chr7_1:7101893-7101912 None:intergenic 55.0%
CCTGCTAGGGTGATTGGAAC+TGG + chr7_1:7101890-7101909 Msa1007560:CDS 55.0%
GGAACTGGGACGTTTGGTTG+TGG + chr7_1:7101905-7101924 Msa1007560:CDS 55.0%
GTCGACTACTGCCAATGGGA+AGG - chr7_1:7102392-7102411 None:intergenic 55.0%
TTCTCTTTCCGGCAGGGTTC+AGG + chr7_1:7102839-7102858 Msa1007560:intron 55.0%
CTGGAGTTACCTGCCATCCA+AGG - chr7_1:7102922-7102941 None:intergenic 55.0%
!! GAAGCACCGACACTTCAGAC+TGG + chr7_1:7103243-7103262 Msa1007560:intron 55.0%
!! GACTGGTCTCAAGGTGTGTC+CGG + chr7_1:7103260-7103279 Msa1007560:intron 55.0%
! GTAACCACATGTGTCGGTGC+CGG - chr7_1:7103282-7103301 None:intergenic 55.0%
TGAACCCTGCAGACTTGCAG+TGG - chr7_1:7103568-7103587 None:intergenic 55.0%
! GACCATGGGGACCTTTTGGA+AGG + chr7_1:7104269-7104288 Msa1007560:CDS 55.0%
ACCCTTCCAAAAGGTCCCCA+TGG - chr7_1:7104274-7104293 None:intergenic 55.0%
GCGAGAGTTACCGAGGGGTA+CGG - chr7_1:7100697-7100716 None:intergenic 60.0%
TACCCCTCGGTAACTCTCGC+CGG + chr7_1:7100697-7100716 Msa1007560:CDS 60.0%
AGTCCGGCGAGAGTTACCGA+GGG - chr7_1:7100703-7100722 None:intergenic 60.0%
ACTCTCGCCGGACTGTCATC+CGG + chr7_1:7100709-7100728 Msa1007560:CDS 60.0%
GAGACACCCGGATGACAGTC+CGG - chr7_1:7100719-7100738 None:intergenic 60.0%
ACTGTCATCCGGGTGTCTCC+TGG + chr7_1:7100720-7100739 Msa1007560:CDS 60.0%
GGTTAGGCGTGTCCTGGTGT+CGG + chr7_1:7101315-7101334 Msa1007560:intron 60.0%
TTTCCGGCAGGGTTCAGGAC+AGG + chr7_1:7102844-7102863 Msa1007560:intron 60.0%
! GGACGACCATGGGGACCTTT+TGG + chr7_1:7104265-7104284 Msa1007560:CDS 60.0%
GCAATCGACGCCGTACCCCT+CGG + chr7_1:7100684-7100703 Msa1007560:CDS 65.0%
GTCCGGCGAGAGTTACCGAG+GGG - chr7_1:7100702-7100721 None:intergenic 65.0%
CAGTCCGGCGAGAGTTACCG+AGG - chr7_1:7100704-7100723 None:intergenic 65.0%
CTCTCGCCGGACTGTCATCC+GGG + chr7_1:7100710-7100729 Msa1007560:CDS 65.0%
! TCCTCGGGTTAGGCGTGTCC+TGG + chr7_1:7101309-7101328 Msa1007560:intron 65.0%
ACCAGGACACGCCTAACCCG+AGG - chr7_1:7101313-7101332 None:intergenic 65.0%
AGTGTCGCGTGTCCGACACC+AGG - chr7_1:7101330-7101349 None:intergenic 65.0%
CTGCCTGTCCTGAACCCTGC+CGG - chr7_1:7102850-7102869 None:intergenic 65.0%
GCAGGGTTCAGGACAGGCAG+TGG + chr7_1:7102850-7102869 Msa1007560:intron 65.0%
!! GTGTCCGGCACCGACACATG+TGG + chr7_1:7103275-7103294 Msa1007560:intron 65.0%
Chromosome Type Strat End Strand Name
chr7_1 gene 7100424 7105556 7100424 ID=Msa1007560;Name=Msa1007560
chr7_1 mRNA 7100424 7105556 7100424 ID=Msa1007560-mRNA-1;Parent=Msa1007560;Name=Msa1007560-mRNA-1;_AED=0.07;_eAED=0.07;_QI=197|1|1|1|1|1|6|472|316
chr7_1 exon 7100424 7100863 7100424 ID=Msa1007560-mRNA-1:exon:2162;Parent=Msa1007560-mRNA-1
chr7_1 exon 7101890 7101994 7101890 ID=Msa1007560-mRNA-1:exon:2163;Parent=Msa1007560-mRNA-1
chr7_1 exon 7102854 7102931 7102854 ID=Msa1007560-mRNA-1:exon:2164;Parent=Msa1007560-mRNA-1
chr7_1 exon 7103455 7103642 7103455 ID=Msa1007560-mRNA-1:exon:2165;Parent=Msa1007560-mRNA-1
chr7_1 exon 7104222 7104395 7104222 ID=Msa1007560-mRNA-1:exon:2166;Parent=Msa1007560-mRNA-1
chr7_1 exon 7104922 7105556 7104922 ID=Msa1007560-mRNA-1:exon:2167;Parent=Msa1007560-mRNA-1
chr7_1 five_prime_UTR 7100424 7100620 7100424 ID=Msa1007560-mRNA-1:five_prime_utr;Parent=Msa1007560-mRNA-1
chr7_1 CDS 7100621 7100863 7100621 ID=Msa1007560-mRNA-1:cds;Parent=Msa1007560-mRNA-1
chr7_1 CDS 7101890 7101994 7101890 ID=Msa1007560-mRNA-1:cds;Parent=Msa1007560-mRNA-1
chr7_1 CDS 7102854 7102931 7102854 ID=Msa1007560-mRNA-1:cds;Parent=Msa1007560-mRNA-1
chr7_1 CDS 7103455 7103642 7103455 ID=Msa1007560-mRNA-1:cds;Parent=Msa1007560-mRNA-1
chr7_1 CDS 7104222 7104395 7104222 ID=Msa1007560-mRNA-1:cds;Parent=Msa1007560-mRNA-1
chr7_1 CDS 7104922 7105084 7104922 ID=Msa1007560-mRNA-1:cds;Parent=Msa1007560-mRNA-1
chr7_1 three_prime_UTR 7105085 7105556 7105085 ID=Msa1007560-mRNA-1:three_prime_utr;Parent=Msa1007560-mRNA-1
Gene Sequence

>Msa1007560

ATGGCAGCATGTGTATACACCGTTTCACAGAACGGAACCGGAGATTTTCAAACGGTGCAAGAAGCAATCGACGCCGTACCCCTCGGTAACTCTCGCCGGACTGTCATCCGGGTGTCTCCTGGAATCTATAAGCAGCCAGTGTATGTTCCTAAGACGAAGAATTTCATCACTCTTGCTGGGTTGTGTCGTGAGGATACTGTGCTTACTTGGAATAATACTGCTACTAAGATTGATCATCATCAACCTGCTAGGGTGATTGGAACTGGGACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATAACTTTTGAGAACTCTGCACCTGAGGGTTCAGGACAGGCAGTGGCAATTAGAGTAACTGCAGATCGATGTGCCTTCTACAATTGTAGGTTCCTTGGATGGCAGGACACACTGTATTTACACTACGGTAAACAATATTTGAAAGATTGCTATGTTGAAGGAAGTGTGGATTTCATCTTCGGCAATAGCACTGCTCTTTTGGAGAACTGTCATATCCACTGCAAGTCTGCAGGGTTCATAACCGCACAGAGTAGAAAATCATCGCAGGAAGCAACTGGTTATGTATTCTTGAGATGTGTTATAACAGGTAATGGAGGACATTCATATGCATATCTTGGACGACCATGGGGACCTTTTGGAAGGGTTGTCTTTGCATACACTTACATGGATCCGTGTGTAAGACAAGTTGGCTGGGATAACTGGGGGAAAGTAGAGAATGAGAGGAGTGCTTGCTTTTATGAATACAGATGTTTTGGACCTGGTTGCTGTCCATCAAATCGAGCAAATTGGTGTAGAGAACTGGTGGATGAAGAAGCAGAGCAGTTCATCATGCATCCTTTCATCGATCCAGAACCAGATAGATCTTGGCTTGCTCAAAGAATGGGTTTGAGGATTCCATATTCTGCGTAG
Protein sequence

>Msa1007560

MAACVYTVSQNGTGDFQTVQEAIDAVPLGNSRRTVIRVSPGIYKQPVYVPKTKNFITLAGLCREDTVLTWNNTATKIDHHQPARVIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYVEGSVDFIFGNSTALLENCHIHCKSAGFITAQSRKSSQEATGYVFLRCVITGNGGHSYAYLGRPWGPFGRVVFAYTYMDPCVRQVGWDNWGKVENERSACFYEYRCFGPGCCPSNRANWCRELVDEEAEQFIMHPFIDPEPDRSWLAQRMGLRIPYSA*