AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar zhongmu-4 / Msa0806790


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806790 MtrunA17_Chr5g0426721 71.316 380 36 4 55 434 1 307 2.36e-160 455
Msa0806790 MtrunA17_Chr3g0132461 44.094 381 156 9 55 432 1 327 2.57e-60 200
Msa0806790 MtrunA17_Chr5g0426661 85.417 96 14 0 339 434 53 148 2.39e-32 120
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
Msa0806790 AT4G09060.1 44.269 253 140 1 51 302 13 265 7.77e-58 193
Msa0806790 AT4G09060.1 43.478 138 66 4 299 427 182 316 3.21e-15 77.0
Msa0806790 AT1G14680.1 45.344 247 120 4 55 298 1 235 1.14e-53 181
Msa0806790 AT1G14680.1 39.568 139 63 5 300 427 155 283 1.60e-13 71.2
Msa0806790 AT4G09060.2 40.860 279 138 3 51 302 13 291 6.72e-53 181
Msa0806790 AT4G09060.2 43.478 138 66 4 299 427 208 342 4.68e-15 76.6

Find 89 sgRNAs with CRISPR-Local

Find 553 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGAGGAATCCATTACCATTT+AGG 0.208076 5_3:+27075910 Msa0806790:three_prime_UTR
GTCTTCTACATATGAATTCT+TGG 0.213648 5_3:+27073528 Msa0806790:CDS
TTTGATGAAATCGTCGATTT+CGG 0.249397 5_3:-27071058 None:intergenic
TTGATGAAATCGTCGATTTC+GGG 0.255477 5_3:-27071057 None:intergenic
GTCTTCTACATATGGATTCT+TGG 0.262711 5_3:+27074490 Msa0806790:CDS
TGAAAATAGCATATTGAAAA+AGG 0.281164 5_3:+27075384 Msa0806790:CDS
AAGTTTGCTCGACTCTCTTT+TGG 0.304400 5_3:+27073483 Msa0806790:CDS
TGTTGAGGAGAATCAGAAAT+TGG 0.314750 5_3:+27071372 Msa0806790:CDS
GAAGCTTGATGTCGAGGGTT+TGG 0.314876 5_3:-27071119 None:intergenic
AAGCTTGATGTCGAGGGTTT+GGG 0.338482 5_3:-27071118 None:intergenic
AAAAGGACAAAGAGCATCTA+AGG 0.339255 5_3:+27074384 Msa0806790:CDS
AAAAGGACAAAGAGCATCTA+AGG 0.339255 5_3:+27075229 Msa0806790:CDS
TACCTTGGCAGATGTACTAT+TGG 0.369909 5_3:-27075470 None:intergenic
GTGAGAAGCAGTAGTGATTC+TGG 0.370229 5_3:-27069487 None:intergenic
TGGGATGTTGGAACGTGATT+TGG 0.388755 5_3:+27071531 Msa0806790:CDS
GTCGAGGGTTTGGGAGGAGA+TGG 0.389737 5_3:-27071109 None:intergenic
GAAAGGATTCATACAGAATC+TGG 0.394294 5_3:+27075436 Msa0806790:CDS
CGCTATCGAGCTACTTGTCT+TGG 0.395328 5_3:-27075609 None:intergenic
GGAAGGCGTGTTTGCGAGCT+GGG 0.415287 5_3:+27071512 Msa0806790:CDS
TACTAAGGTTGACTCTTCTT+CGG 0.416932 5_3:+27073441 Msa0806790:intron
GATACATTCCTAAATGGTAA+TGG 0.418421 5_3:-27075918 None:intergenic
CAATCCATCGACCACTCATT+AGG 0.420092 5_3:+27071081 Msa0806790:CDS
AGCGATGAGGGAGGCGGCGA+CGG 0.437000 5_3:-27069513 None:intergenic
CGAGCTACTTGTCTTGGAAC+TGG 0.447822 5_3:-27075603 None:intergenic
AGGAAGGCGTGTTTGCGAGC+TGG 0.456033 5_3:+27071511 Msa0806790:CDS
GCGAAGTGTGAGAATCTGTT+GGG 0.460066 5_3:+27071397 Msa0806790:CDS
GTTGGGGCATTGTAGAGAAC+TGG 0.463463 5_3:+27071414 Msa0806790:CDS
TTTCAAAATGAAGCTGAAGA+AGG 0.465135 5_3:+27071484 Msa0806790:CDS
CTCACTCTCGCCGGAACCTA+AGG 0.470941 5_3:+27069538 Msa0806790:CDS
TCGAGGGTTTGGGAGGAGAT+GGG 0.471014 5_3:-27071108 None:intergenic
TCTTCTTCGGCAAGCACACA+TGG 0.474846 5_3:+27073454 Msa0806790:CDS
TGAATTGATGTCTCTAGAAA+AGG 0.480662 5_3:+27074367 Msa0806790:CDS
TGAATTGATGTCTCTAGAAA+AGG 0.480662 5_3:+27075212 Msa0806790:CDS
AATTGTCTTACCTTAGGTTC+CGG 0.482824 5_3:-27069548 None:intergenic
AAAGACGAGTCTTCTACATA+TGG 0.492701 5_3:+27074482 Msa0806790:CDS
AAGTAGCTCGATAGCGAAGA+AGG 0.494411 5_3:+27075616 Msa0806790:CDS
AGCTGCTGTCAATGTGGAGC+GGG 0.505097 5_3:+27074543 Msa0806790:CDS
CGAGAGTGAGAGAGCGATGA+GGG 0.518620 5_3:-27069525 None:intergenic
AGCTGAAGAAGGAGCGAGGA+AGG 0.518905 5_3:+27071495 Msa0806790:CDS
TGAGAGAGCGATGAGGGAGG+CGG 0.527182 5_3:-27069519 None:intergenic
GATGGTGATGGTGTTGTTGT+CGG 0.530230 5_3:-27071022 None:intergenic
GGCACGAAGCTTGATGTCGA+GGG 0.536194 5_3:-27071124 None:intergenic
ATGGTGGTGACGACATGTGC+AGG 0.538649 5_3:-27075675 None:intergenic
TTGGCAGATGTACTATTGGT+AGG 0.541731 5_3:-27075466 None:intergenic
AAATATAGTAACTGTGTCAA+AGG 0.542852 5_3:-27075763 None:intergenic
AATCATTCCCTGCACTGCAT+AGG 0.546035 5_3:-27075855 None:intergenic
CGAACTCATTGAACAATCCA+AGG 0.552460 5_3:+27071215 Msa0806790:CDS
TAAGCTCGAAAGAGCTGAAG+AGG 0.554165 5_3:+27074409 Msa0806790:CDS
TAGTGATGAAATACATGGAA+AGG 0.556765 5_3:+27075419 Msa0806790:CDS
ATGTCGCCATGAGATTGAAT+CGG 0.559587 5_3:+27071579 Msa0806790:CDS
TGACCTCCTTGACTCTCTTG+TGG 0.562654 5_3:+27074445 Msa0806790:CDS
ATGATACCGATTCAATCTCA+TGG 0.571091 5_3:-27071585 None:intergenic
GCTCGAAAGAGCTGAAGAGG+AGG 0.578578 5_3:+27074412 Msa0806790:CDS
CCTCCTCTTCAGCTTTGTCG+AGG 0.580231 5_3:-27075257 None:intergenic
AGGCACGAAGCTTGATGTCG+AGG 0.581651 5_3:-27071125 None:intergenic
CTTGATGTCGAGGGTTTGGG+AGG 0.585010 5_3:-27071115 None:intergenic
TTCGGCAAGCACACATGGGG+AGG 0.585493 5_3:+27073459 Msa0806790:CDS
TTCGGGTGGAAGAGACATGA+TGG 0.585743 5_3:-27071040 None:intergenic
TAACCTCGACAAAGCTGAAG+AGG 0.588349 5_3:+27075254 Msa0806790:CDS
AGCGAAGTGTGAGAATCTGT+TGG 0.590825 5_3:+27071396 Msa0806790:CDS
GGCGATAAAGAAGTTTGTTG+AGG 0.590972 5_3:+27071357 Msa0806790:CDS
CATCGCTCTCTCACTCTCGC+CGG 0.603353 5_3:+27069529 Msa0806790:CDS
AAAGAGCTGAAGAGGAGGTG+AGG 0.606699 5_3:+27074417 Msa0806790:CDS
CTTCTTCGGCAAGCACACAT+GGG 0.608450 5_3:+27073455 Msa0806790:CDS
AGGATTCATACAGAATCTGG+TGG 0.609008 5_3:+27075439 Msa0806790:CDS
AAGACCTAATGAGTGGTCGA+TGG 0.616951 5_3:-27071085 None:intergenic
TACCAATAGTACATCTGCCA+AGG 0.617685 5_3:+27075468 Msa0806790:CDS
AAGGTTAGTGATGAAATACA+TGG 0.623151 5_3:+27075414 Msa0806790:CDS
ATGAAATCGTCGATTTCGGG+TGG 0.634730 5_3:-27071054 None:intergenic
GTGTTTGCGAGCTGGGATGT+TGG 0.635975 5_3:+27071519 Msa0806790:CDS
GCATTGTAGAGAACTGGAGA+AGG 0.636476 5_3:+27071420 Msa0806790:CDS
TTCTTCGGCAAGCACACATG+GGG 0.642508 5_3:+27073456 Msa0806790:CDS
GAGTGAGAGAGCGATGAGGG+AGG 0.643813 5_3:-27069522 None:intergenic
GTAGCTTAAAACAATCAACT+CGG 0.647486 5_3:+27074324 Msa0806790:intron
AAGAAGATGAATCTAGACAA+TGG 0.648894 5_3:-27075694 None:intergenic
CCTCGACAAAGCTGAAGAGG+AGG 0.650548 5_3:+27075257 Msa0806790:CDS
GCGAGAGTGAGAGAGCGATG+AGG 0.652031 5_3:-27069526 None:intergenic
AAGCTGCTGTCAATGTGGAG+CGG 0.655453 5_3:+27074542 Msa0806790:CDS
GGATTCATACAGAATCTGGT+GGG 0.658187 5_3:+27075440 Msa0806790:CDS
CGAAGTGTGAGAATCTGTTG+GGG 0.661772 5_3:+27071398 Msa0806790:CDS
TGGAAGAGACATGATGGTGA+TGG 0.667795 5_3:-27071034 None:intergenic
ATGAAGCTGAAGAAGGAGCG+AGG 0.675640 5_3:+27071491 Msa0806790:CDS
AGATGGGAAGACCTAATGAG+TGG 0.676635 5_3:-27071092 None:intergenic
GTATGAAGCGTCTGTGAATG+CGG 0.695860 5_3:+27071333 Msa0806790:intron
CTGCTGCCACAAGAGAGTCA+AGG 0.705247 5_3:-27074451 None:intergenic
CTGCCACAAGAGAGTCAAGG+AGG 0.721597 5_3:-27074448 None:intergenic
TGGTGGTGACGACATGTGCA+GGG 0.722428 5_3:-27075674 None:intergenic
AAGATGAATCTAGACAATGG+TGG 0.726175 5_3:-27075691 None:intergenic
TGAAGCGTCTGTGAATGCGG+TGG 0.757584 5_3:+27071336 Msa0806790:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AACTTATTTTTGAAAAAATA+AGG + chr5_3:27068618-27068637 Msa0806790:intron 10.0%
!!! TTAGTTTTAAATTTAATTGT+TGG - chr5_3:27070288-27070307 None:intergenic 10.0%
!!! TTTTATAAACATTTTTTATG+TGG + chr5_3:27070373-27070392 Msa0806790:intron 10.0%
!! AAAATAAATAATAGTAATCA+TGG - chr5_3:27071256-27071275 None:intergenic 10.0%
!!! ATTACTATTATTTATTTTTC+AGG + chr5_3:27071258-27071277 Msa0806790:intron 10.0%
!!! TAATTTTTGATTATCTTTTT+TGG + chr5_3:27071300-27071319 Msa0806790:intron 10.0%
!! AAAAAAATTTCGAAAAATAA+AGG - chr5_3:27072808-27072827 None:intergenic 10.0%
!!! ATATTTACTTTATTTTACTA+AGG + chr5_3:27073426-27073445 Msa0806790:intron 10.0%
!!! TAATTTTTCAAAATAAATTG+AGG + chr5_3:27075892-27075911 Msa0806790:three_prime_UTR 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072509-27072528 Msa0806790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072509-27072528 Msa0806790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072509-27072528 Msa0806790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072509-27072528 Msa0806790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072509-27072528 Msa0806790:intron 100.0%
! GGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072509-27072528 Msa0806790:intron 100.0%
!!! TTTTTTGTGATTGTTTAATA+GGG - chr5_3:27068174-27068193 None:intergenic 15.0%
!!! ATTTTTTGTGATTGTTTAAT+AGG - chr5_3:27068175-27068194 None:intergenic 15.0%
!!! TTTTGTTTAAATGATTGTTA+AGG + chr5_3:27068394-27068413 Msa0806790:intron 15.0%
!!! GTTTATATTCTCATTTTTAT+AGG - chr5_3:27068499-27068518 None:intergenic 15.0%
!!! AAGAATAGATTTTCAATTTA+TGG - chr5_3:27068584-27068603 None:intergenic 15.0%
!! ACTTCTTTCAAAAAAAAAAA+AGG - chr5_3:27068645-27068664 None:intergenic 15.0%
!!! AGGTAAAACAATTTTTAATT+GGG - chr5_3:27068826-27068845 None:intergenic 15.0%
!!! TTTTACCTCAAATTAAAAAA+AGG + chr5_3:27068838-27068857 Msa0806790:intron 15.0%
!!! TGGATATTTTAAATCTTAAA+AGG + chr5_3:27069955-27069974 Msa0806790:intron 15.0%
!!! AATTTTCTGTTGATAAAATT+AGG - chr5_3:27070068-27070087 None:intergenic 15.0%
!!! CAATTAAATTTAAAACTAAC+TGG + chr5_3:27070289-27070308 Msa0806790:intron 15.0%
!! AAAAGTGAAAATTATACATT+AGG - chr5_3:27070797-27070816 None:intergenic 15.0%
!!! TTTTTATTATTTTCTTCTCT+AGG + chr5_3:27070895-27070914 Msa0806790:intron 15.0%
!!! TATTATTTATTTTTCAGGAA+TGG + chr5_3:27071263-27071282 Msa0806790:intron 15.0%
!! CAAAAATCTATTAAAAGATA+GGG - chr5_3:27072062-27072081 None:intergenic 15.0%
!! ACAAAAATCTATTAAAAGAT+AGG - chr5_3:27072063-27072082 None:intergenic 15.0%
!! AAAACTTAAAAATGTAGTAA+AGG - chr5_3:27072301-27072320 None:intergenic 15.0%
!! TAGTAAGAAATTTGATTAAA+TGG + chr5_3:27072569-27072588 Msa0806790:intron 15.0%
!!! GTTTTTTCTATTATAGAAAT+AGG - chr5_3:27073942-27073961 None:intergenic 15.0%
!!! TTTACAGTTTTTGAATTATA+TGG + chr5_3:27075313-27075332 Msa0806790:intron 15.0%
!! AATGCAATTAATTACTTAAA+AGG - chr5_3:27075561-27075580 None:intergenic 15.0%
!! AAAAACTCATAGGATATAAA+AGG - chr5_3:27067836-27067855 None:intergenic 20.0%
!! TTTGGATTATAGAATTCAAA+CGG + chr5_3:27067872-27067891 Msa0806790:intron 20.0%
!! TTAATTGGGATAAAATAATC+AGG - chr5_3:27068812-27068831 None:intergenic 20.0%
!!! GAGGTAAAACAATTTTTAAT+TGG - chr5_3:27068827-27068846 None:intergenic 20.0%
!!! CTTAACCTTTTTTTAATTTG+AGG - chr5_3:27068846-27068865 None:intergenic 20.0%
!! TTAAGAGTTGTATATATTGA+GGG + chr5_3:27068861-27068880 Msa0806790:intron 20.0%
!! AATTCTCATAAGAAAAAAGA+GGG - chr5_3:27068894-27068913 None:intergenic 20.0%
!! AAATTCTCATAAGAAAAAAG+AGG - chr5_3:27068895-27068914 None:intergenic 20.0%
!!! AAGTATTTTTTGTACGTTAA+TGG - chr5_3:27069008-27069027 None:intergenic 20.0%
!! TTTATTCACATAGAAAAAGA+GGG - chr5_3:27069298-27069317 None:intergenic 20.0%
!! ATTTATTCACATAGAAAAAG+AGG - chr5_3:27069299-27069318 None:intergenic 20.0%
!!! ATAAATTGGGTTTTAGATTA+TGG + chr5_3:27069935-27069954 Msa0806790:intron 20.0%
!! GCTACAATTAAAGTAATAAA+TGG - chr5_3:27070046-27070065 None:intergenic 20.0%
!! ATTGTAACCTAATTGTAAAA+TGG + chr5_3:27070085-27070104 Msa0806790:intron 20.0%
!! TTGTAACCTAATTGTAAAAT+GGG + chr5_3:27070086-27070105 Msa0806790:intron 20.0%
!! TTTCTAATCAAGTTTCTAAA+CGG - chr5_3:27070160-27070179 None:intergenic 20.0%
!! GAATATATACCATGAAAAAT+TGG - chr5_3:27070230-27070249 None:intergenic 20.0%
!! TTATTTCACAATTTCTAATG+TGG + chr5_3:27070313-27070332 Msa0806790:intron 20.0%
!! AATTATACATTAGGTGAAAA+AGG - chr5_3:27070788-27070807 None:intergenic 20.0%
!!! TCTAGGTTTATTTTATATGA+AGG + chr5_3:27070912-27070931 Msa0806790:intron 20.0%
!!! CTTTTTGTTTTAGTTTTTGA+AGG - chr5_3:27071194-27071213 None:intergenic 20.0%
!! ATAAATAATAGTAATCATGG+AGG - chr5_3:27071253-27071272 None:intergenic 20.0%
!!! TGATTATCTTTTTTGGTTTT+TGG + chr5_3:27071307-27071326 Msa0806790:intron 20.0%
!! TTGAGATATTAATTGATTAG+TGG + chr5_3:27071652-27071671 Msa0806790:intron 20.0%
!! AATTGTTTAAATTACACTAC+CGG + chr5_3:27071897-27071916 Msa0806790:intron 20.0%
!! AGTATAAAGTAAGTTGTTTA+GGG + chr5_3:27072165-27072184 Msa0806790:intron 20.0%
!!! ATTTTTAAGTTTTCCCATAT+TGG + chr5_3:27072308-27072327 Msa0806790:intron 20.0%
!!! TTTTTAAGTTTTCCCATATT+GGG + chr5_3:27072309-27072328 Msa0806790:intron 20.0%
!!! AGTATTTGGAATTTCATTTT+CGG + chr5_3:27072860-27072879 Msa0806790:intron 20.0%
!! TAACAAATGTTGTAAAATTG+TGG + chr5_3:27074670-27074689 Msa0806790:intron 20.0%
!!! CAGTTTTCTATTATAGAAAT+AGG - chr5_3:27074909-27074928 None:intergenic 20.0%
!! ATTGAAAGATTTACGTATTA+TGG - chr5_3:27074962-27074981 None:intergenic 20.0%
!! TGAAAATAGCATATTGAAAA+AGG + chr5_3:27075384-27075403 Msa0806790:CDS 20.0%
!!! ACAAACTTTTTTTTTTCACG+TGG + chr5_3:27067744-27067763 Msa0806790:intron 25.0%
!! AAATGATTTGTCTTCACAAT+AGG - chr5_3:27067806-27067825 None:intergenic 25.0%
!! ATATTTCAAAGTTTAGAACC+CGG + chr5_3:27067934-27067953 Msa0806790:intron 25.0%
! TATAGGATGGATAAAAGTAA+TGG + chr5_3:27067976-27067995 Msa0806790:intron 25.0%
! TCTTTCATCGATAAATTAGA+AGG + chr5_3:27068433-27068452 Msa0806790:intron 25.0%
! AAAAGTAATTCTCAAGCAAA+CGG - chr5_3:27068542-27068561 None:intergenic 25.0%
! AATAAAATTGGAGAGAGATA+AGG - chr5_3:27068759-27068778 None:intergenic 25.0%
! GTTAAGAGTTGTATATATTG+AGG + chr5_3:27068860-27068879 Msa0806790:intron 25.0%
! ATTCTCATAAGAAAAAAGAG+GGG - chr5_3:27068893-27068912 None:intergenic 25.0%
!!! TGAGAATTTTTTTGCGATAT+AGG + chr5_3:27068906-27068925 Msa0806790:intron 25.0%
!! TTTTAGATTTGTGCTTAAGT+CGG + chr5_3:27069027-27069046 Msa0806790:intron 25.0%
! TTATTCTATCAACCTTAAGT+CGG - chr5_3:27069137-27069156 None:intergenic 25.0%
! AAGAAGTCATTTACTTAAGT+CGG + chr5_3:27069212-27069231 Msa0806790:intron 25.0%
! AAATAGAGAGAAAAATCCTT+AGG - chr5_3:27069254-27069273 None:intergenic 25.0%
!! GAAACCTTTTCTCTTAAAAA+AGG + chr5_3:27069418-27069437 Msa0806790:intron 25.0%
!!! TTGTTTTAGGGTTTTAGAAT+TGG + chr5_3:27069596-27069615 Msa0806790:intron 25.0%
!!! TGTTTTAGGGTTTTAGAATT+GGG + chr5_3:27069597-27069616 Msa0806790:intron 25.0%
! AATTGGATATTGTGAATCAT+AGG + chr5_3:27069633-27069652 Msa0806790:intron 25.0%
! TGTGAATCATAGGAATAAAT+TGG + chr5_3:27069643-27069662 Msa0806790:intron 25.0%
! GTGAATCATAGGAATAAATT+GGG + chr5_3:27069644-27069663 Msa0806790:intron 25.0%
! ATAGGAATAAATTGGGAATT+GGG + chr5_3:27069651-27069670 Msa0806790:intron 25.0%
! GATATCTCTATGCAAAATAA+AGG - chr5_3:27069747-27069766 None:intergenic 25.0%
!! ACTTTCAATTTTGTTGAATC+TGG + chr5_3:27069783-27069802 Msa0806790:intron 25.0%
! TATACTCTGTTAGCATATTT+CGG - chr5_3:27069819-27069838 None:intergenic 25.0%
! CAGAGTATAAAACAAAAGAT+TGG + chr5_3:27069830-27069849 Msa0806790:intron 25.0%
!! ATCTTGTTGTGCATATAAAT+TGG + chr5_3:27069921-27069940 Msa0806790:intron 25.0%
!! TCTTGTTGTGCATATAAATT+GGG + chr5_3:27069922-27069941 Msa0806790:intron 25.0%
! ATGAGAACTTCTTTCATTTA+CGG + chr5_3:27069978-27069997 Msa0806790:intron 25.0%
! ATTAAAAATCATGCATAACG+AGG - chr5_3:27070426-27070445 None:intergenic 25.0%
! GTTGTTAAGAGATAATATGT+GGG + chr5_3:27070599-27070618 Msa0806790:intron 25.0%
! TTGTTAAGAGATAATATGTG+GGG + chr5_3:27070600-27070619 Msa0806790:intron 25.0%
! ATGTCTCTTAATAAGACTAA+GGG + chr5_3:27070727-27070746 Msa0806790:intron 25.0%
!! AAAAAGGCATAAAATAACAC+GGG - chr5_3:27070772-27070791 None:intergenic 25.0%
!! GAAAAAGGCATAAAATAACA+CGG - chr5_3:27070773-27070792 None:intergenic 25.0%
!!! TTTCACTTTTGTCTTCTTAA+AGG + chr5_3:27070807-27070826 Msa0806790:intron 25.0%
! ATATTCATAAGTCAACTAGT+TGG + chr5_3:27070846-27070865 Msa0806790:intron 25.0%
! AACATGGTAAGCAAAATTTA+AGG - chr5_3:27070968-27070987 None:intergenic 25.0%
! GAGTATAAAGTAAGTTGTTT+AGG + chr5_3:27072164-27072183 Msa0806790:intron 25.0%
!! TTGTTTAGGGTTATTTCATT+TGG + chr5_3:27072178-27072197 Msa0806790:intron 25.0%
!! TGTTTAGGGTTATTTCATTT+GGG + chr5_3:27072179-27072198 Msa0806790:intron 25.0%
! ACTTAAAAATGTAGTAAAGG+AGG - chr5_3:27072298-27072317 None:intergenic 25.0%
! ATTTAATTCAAAACAACCTG+CGG + chr5_3:27072430-27072449 Msa0806790:intron 25.0%
!! TTTTACTTGAAAGTCATATG+AGG + chr5_3:27072894-27072913 Msa0806790:intron 25.0%
! TAAGCATGTATACTTAAGAA+TGG - chr5_3:27073072-27073091 None:intergenic 25.0%
!!! TTTGTTATTTGTCTAGAACA+TGG - chr5_3:27074657-27074676 None:intergenic 25.0%
! TTGTAAAATTGTGGTGATAA+CGG + chr5_3:27074679-27074698 Msa0806790:intron 25.0%
! ACTATAGCATTATAATCTAG+TGG + chr5_3:27074703-27074722 Msa0806790:intron 25.0%
! CTATAGCATTATAATCTAGT+GGG + chr5_3:27074704-27074723 Msa0806790:intron 25.0%
! GCAATTAATTACTTAAAAGG+AGG - chr5_3:27075558-27075577 None:intergenic 25.0%
! AAATATAGTAACTGTGTCAA+AGG - chr5_3:27075766-27075785 None:intergenic 25.0%
!!! TATTTTTCATTTGCTGAAGT+TGG + chr5_3:27075781-27075800 Msa0806790:three_prime_UTR 25.0%
! TTAAAACCATGAAAAAACAG+TGG + chr5_3:27075813-27075832 Msa0806790:three_prime_UTR 25.0%
! TAAAACCATGAAAAAACAGT+GGG + chr5_3:27075814-27075833 Msa0806790:three_prime_UTR 25.0%
!! GGTTTTGATATGTTCGTATT+TGG + chr5_3:27067765-27067784 Msa0806790:intron 30.0%
TTCTATAATCCAAACTGCAT+AGG - chr5_3:27067866-27067885 None:intergenic 30.0%
AAGCGTCAAACATAAATGAT+TGG - chr5_3:27068002-27068021 None:intergenic 30.0%
AACATTCAAACATGTTGTGA+TGG - chr5_3:27068107-27068126 None:intergenic 30.0%
TGAAAAATATCATTTCTCCG+CGG + chr5_3:27068341-27068360 Msa0806790:intron 30.0%
TTGGACATGGTCAATAAAAT+TGG - chr5_3:27068771-27068790 None:intergenic 30.0%
! ATTTTATTGACCATGTCCAA+TGG + chr5_3:27068771-27068790 Msa0806790:intron 30.0%
!!! TTTTTTGTACGTTAATGGAC+TGG - chr5_3:27069003-27069022 None:intergenic 30.0%
TCTTTCAAACTTCCTTAAGT+CGG + chr5_3:27069099-27069118 Msa0806790:intron 30.0%
TATTCTATCAACCTTAAGTC+GGG - chr5_3:27069136-27069155 None:intergenic 30.0%
AATAATTTCCTTAAGTCGCT+AGG + chr5_3:27069174-27069193 Msa0806790:intron 30.0%
!!! ACTGCCTTTTTTAAGAGAAA+AGG - chr5_3:27069425-27069444 None:intergenic 30.0%
AGAATCAATTGTCTTACCTT+AGG - chr5_3:27069557-27069576 None:intergenic 30.0%
CTAAAACCCTAAAACAAGAA+AGG - chr5_3:27069593-27069612 None:intergenic 30.0%
TGGGAATTGTTTGTGTAAAT+TGG + chr5_3:27069616-27069635 Msa0806790:intron 30.0%
CATAGGAATAAATTGGGAAT+TGG + chr5_3:27069650-27069669 Msa0806790:intron 30.0%
GCATAGAGATATCTTCAAAT+TGG + chr5_3:27069754-27069773 Msa0806790:intron 30.0%
!! ACAAAAGATTGGTCTTTCTT+AGG + chr5_3:27069841-27069860 Msa0806790:intron 30.0%
TTGTTTCAAACATTACACGA+TGG + chr5_3:27069892-27069911 Msa0806790:intron 30.0%
TGAGAACTTCTTTCATTTAC+GGG + chr5_3:27069979-27069998 Msa0806790:intron 30.0%
! CAAAGTACACCAATTTTTCA+TGG + chr5_3:27070218-27070237 Msa0806790:intron 30.0%
CATCACATAATGCTAAATTC+TGG - chr5_3:27070478-27070497 None:intergenic 30.0%
! TTTAGCATTATGTGATGATG+AGG + chr5_3:27070481-27070500 Msa0806790:intron 30.0%
GGTTGTTAAGAGATAATATG+TGG + chr5_3:27070598-27070617 Msa0806790:intron 30.0%
GATGTCTCTTAATAAGACTA+AGG + chr5_3:27070726-27070745 Msa0806790:intron 30.0%
AAAATAACACGGGAAAACAA+AGG - chr5_3:27070762-27070781 None:intergenic 30.0%
! TTTTGCTTACCATGTTTTAC+AGG + chr5_3:27070972-27070991 Msa0806790:intron 30.0%
!! TTTGATGAAATCGTCGATTT+CGG - chr5_3:27071061-27071080 None:intergenic 30.0%
! ATTTTGTTCGATTTCTTTCG+AGG - chr5_3:27071148-27071167 None:intergenic 30.0%
TTTCAAAATGAAGCTGAAGA+AGG + chr5_3:27071484-27071503 Msa0806790:CDS 30.0%
CAACAACTTCAAAAGAGAAA+AGG - chr5_3:27071630-27071649 None:intergenic 30.0%
ATACATACCCTAAATCCTAA+TGG + chr5_3:27071757-27071776 Msa0806790:intron 30.0%
ACATACACCATTAGGATTTA+GGG - chr5_3:27071767-27071786 None:intergenic 30.0%
TACATACACCATTAGGATTT+AGG - chr5_3:27071768-27071787 None:intergenic 30.0%
TGTATCTCACACAAAAGATA+GGG - chr5_3:27071974-27071993 None:intergenic 30.0%
TTGTATCTCACACAAAAGAT+AGG - chr5_3:27071975-27071994 None:intergenic 30.0%
AATTTCTAATATCCCAAACC+AGG - chr5_3:27072256-27072275 None:intergenic 30.0%
! AATGTAGTAAAGGAGGTTTT+GGG - chr5_3:27072291-27072310 None:intergenic 30.0%
! AAATGTAGTAAAGGAGGTTT+TGG - chr5_3:27072292-27072311 None:intergenic 30.0%
ATATCGAAAACTCCCAATAT+GGG - chr5_3:27072324-27072343 None:intergenic 30.0%
AATATCGAAAACTCCCAATA+TGG - chr5_3:27072325-27072344 None:intergenic 30.0%
ATGGAAAGAAAAAGAAGGAA+GGG - chr5_3:27072367-27072386 None:intergenic 30.0%
AAATATGATCCCATTCCTTA+AGG - chr5_3:27072414-27072433 None:intergenic 30.0%
TAAGCATGGTATCGTTATTA+GGG - chr5_3:27072706-27072725 None:intergenic 30.0%
TCTTTCACTAAAACTAAGCA+TGG - chr5_3:27072720-27072739 None:intergenic 30.0%
! CAGATAAGTTCTGACATATT+AGG + chr5_3:27072756-27072775 Msa0806790:intron 30.0%
AAATTCCAAATACTCAGTGA+CGG - chr5_3:27072854-27072873 None:intergenic 30.0%
CATGTATACTTAAGAATGGT+GGG - chr5_3:27073068-27073087 None:intergenic 30.0%
TGCTTACCCTCATTTAAATT+TGG + chr5_3:27073086-27073105 Msa0806790:intron 30.0%
CCAAGTCCAAATTTAAATGA+GGG - chr5_3:27073095-27073114 None:intergenic 30.0%
TGTTAAATGAAATGCATTGC+AGG - chr5_3:27073155-27073174 None:intergenic 30.0%
AATTGGATTAAGCAGTATGT+TGG - chr5_3:27073179-27073198 None:intergenic 30.0%
ATACTAGTGGGAGTTAAAAT+TGG - chr5_3:27073196-27073215 None:intergenic 30.0%
ATTTCGAGATTAGAGAGAAA+GGG - chr5_3:27073351-27073370 None:intergenic 30.0%
TATTTCGAGATTAGAGAGAA+AGG - chr5_3:27073352-27073371 None:intergenic 30.0%
TTCTCTCTAATCTCGAAATA+TGG + chr5_3:27073352-27073371 Msa0806790:intron 30.0%
TCTCACAAGTGTTAATCATT+TGG + chr5_3:27073384-27073403 Msa0806790:intron 30.0%
GTCTTCTACATATGAATTCT+TGG + chr5_3:27073528-27073547 Msa0806790:CDS 30.0%
! CTGGTTAATTGTCTAGAATA+TGG - chr5_3:27073695-27073714 None:intergenic 30.0%
TAACCAGTGTTGTAAAATTG+TGG + chr5_3:27073708-27073727 Msa0806790:intron 30.0%
TGATGCACACAAATACAAAA+GGG - chr5_3:27074045-27074064 None:intergenic 30.0%
ATGATGCACACAAATACAAA+AGG - chr5_3:27074046-27074065 None:intergenic 30.0%
TAGCATATAGAGGAAAATAG+CGG - chr5_3:27074174-27074193 None:intergenic 30.0%
GTGTTATCAATAGCATATAG+AGG - chr5_3:27074184-27074203 None:intergenic 30.0%
CAAAATCCAGATGATAATCA+GGG - chr5_3:27074305-27074324 None:intergenic 30.0%
ACAAAATCCAGATGATAATC+AGG - chr5_3:27074306-27074325 None:intergenic 30.0%
GTAGCTTAAAACAATCAACT+CGG + chr5_3:27074324-27074343 Msa0806790:intron 30.0%
! TGAATTGATGTCTCTAGAAA+AGG + chr5_3:27074367-27074386 Msa0806790:CDS 30.0%
ATGGCATCAGAGATAAAAAT+TGG - chr5_3:27073676-27073695 None:intergenic 30.0%
TAGCATATTGTGGAAAATAG+CGG - chr5_3:27075066-27075085 None:intergenic 30.0%
GTGTTATCAATAGCATATTG+TGG - chr5_3:27075076-27075095 None:intergenic 30.0%
TGATAACACTGCAGTTAAAA+TGG + chr5_3:27075087-27075106 Msa0806790:intron 30.0%
GATAACACTGCAGTTAAAAT+GGG + chr5_3:27075088-27075107 Msa0806790:intron 30.0%
CAGAATGCAAATGATAATCA+GGG - chr5_3:27075152-27075171 None:intergenic 30.0%
ACAGAATGCAAATGATAATC+AGG - chr5_3:27075153-27075172 None:intergenic 30.0%
! TGAATTGATGTCTCTAGAAA+AGG + chr5_3:27074367-27074386 Msa0806790:CDS 30.0%
TAAAAAGTCGACAGTAAAAG+GGG - chr5_3:27075297-27075316 None:intergenic 30.0%
GTAAAAAGTCGACAGTAAAA+GGG - chr5_3:27075298-27075317 None:intergenic 30.0%
TGTAAAAAGTCGACAGTAAA+AGG - chr5_3:27075299-27075318 None:intergenic 30.0%
ATTATATGGAATGACTGACT+TGG + chr5_3:27075327-27075346 Msa0806790:intron 30.0%
TATTGAAAAAGGAGAACAGA+AGG + chr5_3:27075395-27075414 Msa0806790:CDS 30.0%
AAGGTTAGTGATGAAATACA+TGG + chr5_3:27075414-27075433 Msa0806790:CDS 30.0%
TAGTGATGAAATACATGGAA+AGG + chr5_3:27075419-27075438 Msa0806790:CDS 30.0%
AAGAAGATGAATCTAGACAA+TGG - chr5_3:27075697-27075716 None:intergenic 30.0%
AGAACGCGCAAAAAACTTAT+AGG + chr5_3:27067959-27067978 Msa0806790:intron 35.0%
TCATTTATGTTTGACGCTTG+CGG + chr5_3:27068003-27068022 Msa0806790:intron 35.0%
! CTTTTGTTCCTTAAATACCG+CGG - chr5_3:27068361-27068380 None:intergenic 35.0%
GAACTTGTGAATTTCACCAT+TGG - chr5_3:27068790-27068809 None:intergenic 35.0%
GAGTTGTATATATTGAGGGA+TGG + chr5_3:27068865-27068884 Msa0806790:intron 35.0%
ATAGTGTACATTCGAACGAA+TGG + chr5_3:27068929-27068948 Msa0806790:intron 35.0%
TAGTGTACATTCGAACGAAT+GGG + chr5_3:27068930-27068949 Msa0806790:intron 35.0%
AGAGAGAAAAATCCTTAGGT+CGG - chr5_3:27069250-27069269 None:intergenic 35.0%
AATTGTCTTACCTTAGGTTC+CGG - chr5_3:27069551-27069570 None:intergenic 35.0%
ACAAGAAAGGAAGGAGAAAT+TGG - chr5_3:27069580-27069599 None:intergenic 35.0%
!!! TCTCCTTCCTTTCTTGTTTT+AGG + chr5_3:27069583-27069602 Msa0806790:intron 35.0%
!!! CTCCTTCCTTTCTTGTTTTA+GGG + chr5_3:27069584-27069603 Msa0806790:intron 35.0%
AACCCTAAAACAAGAAAGGA+AGG - chr5_3:27069589-27069608 None:intergenic 35.0%
TCTACACATAGAGTATACGA+TGG - chr5_3:27069712-27069731 None:intergenic 35.0%
ACTCTATGTGTAGAGTCAAT+AGG + chr5_3:27069718-27069737 Msa0806790:intron 35.0%
CTTAGGATGAATAGCTTCAT+AGG + chr5_3:27069858-27069877 Msa0806790:intron 35.0%
! GTGTAGCCCATTTTACAATT+AGG - chr5_3:27070095-27070114 None:intergenic 35.0%
!! GGTTTGATTTGAGATCAAAG+GGG - chr5_3:27070139-27070158 None:intergenic 35.0%
!! CGGTTTGATTTGAGATCAAA+GGG - chr5_3:27070140-27070159 None:intergenic 35.0%
!! ACGGTTTGATTTGAGATCAA+AGG - chr5_3:27070141-27070160 None:intergenic 35.0%
CAATGTCACGTGTTTAAACA+TGG - chr5_3:27070198-27070217 None:intergenic 35.0%
GTAGCTTACATACATTCACA+TGG - chr5_3:27070571-27070590 None:intergenic 35.0%
TTATCTCTTAACAACCAGCA+GGG - chr5_3:27070594-27070613 None:intergenic 35.0%
ATTATCTCTTAACAACCAGC+AGG - chr5_3:27070595-27070614 None:intergenic 35.0%
! TTTTTGATGCTTTGTAGGCT+AGG + chr5_3:27070623-27070642 Msa0806790:intron 35.0%
! AATGATACTTCGTCAAGTTG+TGG + chr5_3:27070660-27070679 Msa0806790:intron 35.0%
TGGTTTACAACATTGCTTCT+AGG + chr5_3:27070680-27070699 Msa0806790:intron 35.0%
! CTTTTGTCTTCTTAAAGGCA+AGG + chr5_3:27070812-27070831 Msa0806790:intron 35.0%
! TACGATGTTTTGCTTGATGA+TGG + chr5_3:27070939-27070958 Msa0806790:intron 35.0%
TATACTGCTCCTGTAAAACA+TGG - chr5_3:27070984-27071003 None:intergenic 35.0%
!! TTGATGAAATCGTCGATTTC+GGG - chr5_3:27071060-27071079 None:intergenic 35.0%
TGTTGAGGAGAATCAGAAAT+TGG + chr5_3:27071372-27071391 Msa0806790:CDS 35.0%
!! ATGATACCGATTCAATCTCA+TGG - chr5_3:27071588-27071607 None:intergenic 35.0%
!! TTAGTGGTGTTGTGTTGATT+AGG + chr5_3:27071668-27071687 Msa0806790:intron 35.0%
!! GTGTTGTGTTGATTAGGAAT+TGG + chr5_3:27071674-27071693 Msa0806790:intron 35.0%
ACAGAACTACATACACCATT+AGG - chr5_3:27071775-27071794 None:intergenic 35.0%
ATGAATGCAATCACATGTGT+AGG - chr5_3:27071871-27071890 None:intergenic 35.0%
ACATTGACATATGTCAACAC+CGG - chr5_3:27071919-27071938 None:intergenic 35.0%
TAAAAGGGTGGTTCCATATA+GGG - chr5_3:27072108-27072127 None:intergenic 35.0%
ATAAAAGGGTGGTTCCATAT+AGG - chr5_3:27072109-27072128 None:intergenic 35.0%
! ACCCTTTTATTAGAGGCAAA+GGG + chr5_3:27072119-27072138 Msa0806790:intron 35.0%
ACCCTTTGCCTCTAATAAAA+GGG - chr5_3:27072123-27072142 None:intergenic 35.0%
! ATTTGGGATATTGTTGAGTG+AGG + chr5_3:27072195-27072214 Msa0806790:intron 35.0%
! TTTGGGATATTGTTGAGTGA+GGG + chr5_3:27072196-27072215 Msa0806790:intron 35.0%
GCTATTTATCAAACCTTACC+TGG + chr5_3:27072235-27072254 Msa0806790:intron 35.0%
TTATCAAACCTTACCTGGTT+TGG + chr5_3:27072240-27072259 Msa0806790:intron 35.0%
TATCAAACCTTACCTGGTTT+GGG + chr5_3:27072241-27072260 Msa0806790:intron 35.0%
! GAGTTTTCGATATTCACACA+TGG + chr5_3:27072331-27072350 Msa0806790:intron 35.0%
! TTTTCGATATTCACACATGG+TGG + chr5_3:27072334-27072353 Msa0806790:intron 35.0%
TTTCGATATTCACACATGGT+GGG + chr5_3:27072335-27072354 Msa0806790:intron 35.0%
GATGGAAAGAAAAAGAAGGA+AGG - chr5_3:27072368-27072387 None:intergenic 35.0%
GAAGGATGGAAAGAAAAAGA+AGG - chr5_3:27072372-27072391 None:intergenic 35.0%
ATTGTTTGGAAGTTGAGTGA+AGG - chr5_3:27072390-27072409 None:intergenic 35.0%
AACTTCCAAACAATGCCTTA+AGG + chr5_3:27072396-27072415 Msa0806790:intron 35.0%
CAAACAATGCCTTAAGGAAT+GGG + chr5_3:27072402-27072421 Msa0806790:intron 35.0%
TCAATCCATATCATCCCTTA+CGG - chr5_3:27072548-27072567 None:intergenic 35.0%
!! CTTTTGACTGAGTAATTGCT+GGG + chr5_3:27072597-27072616 Msa0806790:intron 35.0%
CTAAGCATGGTATCGTTATT+AGG - chr5_3:27072707-27072726 None:intergenic 35.0%
ATTAGGATTCAAACCAGACA+TGG + chr5_3:27072773-27072792 Msa0806790:intron 35.0%
GAGAAATCTAACAATAGCTC+AGG - chr5_3:27072926-27072945 None:intergenic 35.0%
! TGCAAAAGTGTGTGAACTTT+CGG + chr5_3:27072947-27072966 Msa0806790:intron 35.0%
GCATGTATACTTAAGAATGG+TGG - chr5_3:27073069-27073088 None:intergenic 35.0%
CCCTCATTTAAATTTGGACT+TGG + chr5_3:27073092-27073111 Msa0806790:intron 35.0%
GCCAAGTCCAAATTTAAATG+AGG - chr5_3:27073096-27073115 None:intergenic 35.0%
CAATGTCTCATGATACTAGT+GGG - chr5_3:27073208-27073227 None:intergenic 35.0%
TCAATGTCTCATGATACTAG+TGG - chr5_3:27073209-27073228 None:intergenic 35.0%
TAGTAGTAGTAGTCCAAGTT+GGG - chr5_3:27073291-27073310 None:intergenic 35.0%
TGGACTACTACTACTAGAAT+AGG + chr5_3:27073295-27073314 Msa0806790:intron 35.0%
TCTAATCTCGAAATATGGCT+AGG + chr5_3:27073357-27073376 Msa0806790:intron 35.0%
! TACTAAGGTTGACTCTTCTT+CGG + chr5_3:27073441-27073460 Msa0806790:intron 35.0%
! TCACCACAATTTTACAACAC+TGG - chr5_3:27073714-27073733 None:intergenic 35.0%
ACTATAGCGCTATAATCTAG+CGG + chr5_3:27073741-27073760 Msa0806790:intron 35.0%
ATTGCCCTAATAGAGAAACT+AGG - chr5_3:27073803-27073822 None:intergenic 35.0%
TTTCTCTATTAGGGCAATAG+CGG + chr5_3:27073805-27073824 Msa0806790:intron 35.0%
ACAAATACAAAAGGGAATGG+AGG - chr5_3:27074037-27074056 None:intergenic 35.0%
CACACAAATACAAAAGGGAA+TGG - chr5_3:27074040-27074059 None:intergenic 35.0%
! TAAATCACACCGTGGATTTT+AGG + chr5_3:27074144-27074163 Msa0806790:intron 35.0%
AACACTGCACTAAACATGTA+AGG + chr5_3:27074199-27074218 Msa0806790:intron 35.0%
TTAGAACCCTGATTATCATC+TGG + chr5_3:27074296-27074315 Msa0806790:intron 35.0%
!! AAAAGGACAAAGAGCATCTA+AGG + chr5_3:27074384-27074403 Msa0806790:CDS 35.0%
AAAGACGAGTCTTCTACATA+TGG + chr5_3:27074482-27074501 Msa0806790:CDS 35.0%
GTCTTCTACATATGGATTCT+TGG + chr5_3:27074490-27074509 Msa0806790:CDS 35.0%
AAACTTGACAAGAGAGTAAG+AGG - chr5_3:27074590-27074609 None:intergenic 35.0%
TTCCTAGTTTCTCCTCTATT+AGG + chr5_3:27074760-27074779 Msa0806790:intron 35.0%
AGCGGAAAAATGAGAATCTT+AGG + chr5_3:27074831-27074850 Msa0806790:intron 35.0%
GCGGAAAAATGAGAATCTTA+GGG + chr5_3:27074832-27074851 Msa0806790:intron 35.0%
CGGAAAAATGAGAATCTTAG+GGG + chr5_3:27074833-27074852 Msa0806790:intron 35.0%
!! AAAAGGACAAAGAGCATCTA+AGG + chr5_3:27074384-27074403 Msa0806790:CDS 35.0%
AAAAAGTCGACAGTAAAAGG+GGG - chr5_3:27075296-27075315 None:intergenic 35.0%
GAAAGGATTCATACAGAATC+TGG + chr5_3:27075436-27075455 Msa0806790:CDS 35.0%
AAGATGAATCTAGACAATGG+TGG - chr5_3:27075694-27075713 None:intergenic 35.0%
!!! TAACACCCACTGTTTTTTCA+TGG - chr5_3:27075822-27075841 None:intergenic 35.0%
TGTTCGTATTTGGACTGCTA+AGG + chr5_3:27067775-27067794 Msa0806790:intron 40.0%
GTTCGTATTTGGACTGCTAA+GGG + chr5_3:27067776-27067795 Msa0806790:intron 40.0%
!!! AGTTTTTTGCGCGTTCTATC+CGG - chr5_3:27067956-27067975 None:intergenic 40.0%
CGCGCAAAAAACTTATAGGA+TGG + chr5_3:27067963-27067982 Msa0806790:intron 40.0%
CATTTATGTTTGACGCTTGC+GGG + chr5_3:27068004-27068023 Msa0806790:intron 40.0%
!! ATCAAACTTGGCTTTGCGAT+TGG - chr5_3:27068052-27068071 None:intergenic 40.0%
AATCGCAAAGCCAAGTTTGA+TGG + chr5_3:27068051-27068070 Msa0806790:intron 40.0%
TCATTTCTCCGCGGTATTTA+AGG + chr5_3:27068350-27068369 Msa0806790:intron 40.0%
GTGAATTTCACCATTGGACA+TGG - chr5_3:27068784-27068803 None:intergenic 40.0%
AGTGTACATTCGAACGAATG+GGG + chr5_3:27068931-27068950 Msa0806790:intron 40.0%
GGACTTATGCATGATGCATA+AGG - chr5_3:27068982-27069001 None:intergenic 40.0%
ACTTCCTTAAGTCGGTTGTA+AGG + chr5_3:27069107-27069126 Msa0806790:intron 40.0%
! GTAACCTTACAACCGACTTA+AGG - chr5_3:27069114-27069133 None:intergenic 40.0%
TTGTAAGGTTACCCGACTTA+AGG + chr5_3:27069122-27069141 Msa0806790:intron 40.0%
TTGATCAACCTAGCGACTTA+AGG - chr5_3:27069185-27069204 None:intergenic 40.0%
GAGAGAAAAATCCTTAGGTC+GGG - chr5_3:27069249-27069268 None:intergenic 40.0%
!! TGTCTGTTGTGGTTTGGTTA+TGG + chr5_3:27069682-27069701 Msa0806790:intron 40.0%
!! TGCTTGAAGTAGTGTTGGTA+GGG - chr5_3:27070015-27070034 None:intergenic 40.0%
!! TTGCTTGAAGTAGTGTTGGT+AGG - chr5_3:27070016-27070035 None:intergenic 40.0%
GTCATTGCTTGAAGTAGTGT+TGG - chr5_3:27070020-27070039 None:intergenic 40.0%
! GAGTATCTAGCTTAGTTGGT+TGG - chr5_3:27070117-27070136 None:intergenic 40.0%
! GGTCTTTTCTCTCACTTCAT+TGG + chr5_3:27070334-27070353 Msa0806790:intron 40.0%
! TGATGATGAGGACATACGAA+AGG + chr5_3:27070493-27070512 Msa0806790:intron 40.0%
GACATACGAAAGGACAGAAA+TGG + chr5_3:27070503-27070522 Msa0806790:intron 40.0%
TATCTCTTAACAACCAGCAG+GGG - chr5_3:27070593-27070612 None:intergenic 40.0%
! TGGGGTTTTTGATGCTTTGT+AGG + chr5_3:27070618-27070637 Msa0806790:intron 40.0%
CATAAGTCAACTAGTTGGCT+CGG + chr5_3:27070851-27070870 Msa0806790:intron 40.0%
CGAACTCATTGAACAATCCA+AGG + chr5_3:27071215-27071234 Msa0806790:CDS 40.0%
GGAGGATTTGAAAGAAACCT+TGG - chr5_3:27071235-27071254 None:intergenic 40.0%
!! GGCGATAAAGAAGTTTGTTG+AGG + chr5_3:27071357-27071376 Msa0806790:CDS 40.0%
ATGTCGCCATGAGATTGAAT+CGG + chr5_3:27071579-27071598 Msa0806790:CDS 40.0%
TGTCAATGCTTTGTAGCTTG+AGG + chr5_3:27071947-27071966 Msa0806790:intron 40.0%
! TGGAACCACCCTTTTATTAG+AGG + chr5_3:27072112-27072131 Msa0806790:intron 40.0%
CTTTGCCTCTAATAAAAGGG+TGG - chr5_3:27072120-27072139 None:intergenic 40.0%
! CACCCTTTTATTAGAGGCAA+AGG + chr5_3:27072118-27072137 Msa0806790:intron 40.0%
CACCCTTTGCCTCTAATAAA+AGG - chr5_3:27072124-27072143 None:intergenic 40.0%
! CTTTTATTAGAGGCAAAGGG+TGG + chr5_3:27072122-27072141 Msa0806790:intron 40.0%
GCAAAGGGTGGTTACATATA+GGG + chr5_3:27072134-27072153 Msa0806790:intron 40.0%
TTGGGATATTGTTGAGTGAG+GGG + chr5_3:27072197-27072216 Msa0806790:intron 40.0%
CTAATATCCCAAACCAGGTA+AGG - chr5_3:27072251-27072270 None:intergenic 40.0%
TTTGGAAGTTGAGTGAAGGA+TGG - chr5_3:27072386-27072405 None:intergenic 40.0%
!! CCATTCCTTAAGGCATTGTT+TGG - chr5_3:27072404-27072423 None:intergenic 40.0%
CCAAACAATGCCTTAAGGAA+TGG + chr5_3:27072401-27072420 Msa0806790:intron 40.0%
TAATTCAAAACAACCTGCGG+AGG + chr5_3:27072433-27072452 Msa0806790:intron 40.0%
ATATGCCGTAAGGGATGATA+TGG + chr5_3:27072540-27072559 Msa0806790:intron 40.0%
!! GCTTTTGACTGAGTAATTGC+TGG + chr5_3:27072596-27072615 Msa0806790:intron 40.0%
CAAACCACTGTATAGCATCA+GGG - chr5_3:27072632-27072651 None:intergenic 40.0%
CTGATGCTATACAGTGGTTT+GGG + chr5_3:27072631-27072650 Msa0806790:intron 40.0%
AAGGACTTATGAACCATGTC+TGG - chr5_3:27072789-27072808 None:intergenic 40.0%
TTCACCAAAACTTCGAAGTC+CGG + chr5_3:27072826-27072845 Msa0806790:intron 40.0%
! CTTTGATAGCACATTCACTC+AGG + chr5_3:27073017-27073036 Msa0806790:intron 40.0%
GCATATACCATGCCAAATTG+TGG + chr5_3:27073249-27073268 Msa0806790:intron 40.0%
GACTTAGCAGTACCACAATT+TGG - chr5_3:27073264-27073283 None:intergenic 40.0%
AATTGTGGTACTGCTAAGTC+AGG + chr5_3:27073264-27073283 Msa0806790:intron 40.0%
CTAGTAGTAGTAGTCCAAGT+TGG - chr5_3:27073292-27073311 None:intergenic 40.0%
AATCTCGAAATATGGCTAGG+TGG + chr5_3:27073360-27073379 Msa0806790:intron 40.0%
!! AAGTTTGCTCGACTCTCTTT+TGG + chr5_3:27073483-27073502 Msa0806790:CDS 40.0%
GTAAAAAGCTGCTGTCAATG+TGG + chr5_3:27073575-27073594 Msa0806790:CDS 40.0%
GCTAGATTATAGCGCTATAG+TGG - chr5_3:27073742-27073761 None:intergenic 40.0%
CTATAGCGCTATAATCTAGC+GGG + chr5_3:27073742-27073761 Msa0806790:intron 40.0%
ACCGTCCTAGTTTCTCTATT+AGG + chr5_3:27073795-27073814 Msa0806790:intron 40.0%
CCCTAATAGAGAAACTAGGA+CGG - chr5_3:27073799-27073818 None:intergenic 40.0%
CCGTCCTAGTTTCTCTATTA+GGG + chr5_3:27073796-27073815 Msa0806790:intron 40.0%
TGGATAGCATTGCAGGAAAA+TGG - chr5_3:27074123-27074142 None:intergenic 40.0%
! GATTTAGTGGATAGCATTGC+AGG - chr5_3:27074130-27074149 None:intergenic 40.0%
AAATCCACGGTGTGATTTAG+TGG - chr5_3:27074143-27074162 None:intergenic 40.0%
TGCACTAAACATGTAAGGCT+TGG + chr5_3:27074204-27074223 Msa0806790:intron 40.0%
GCACTAAACATGTAACAGTC+AGG + chr5_3:27074250-27074269 Msa0806790:intron 40.0%
GTAAAAAGCTGCTGTCAATG+TGG + chr5_3:27073575-27073594 Msa0806790:CDS 40.0%
GTCCTAATAGAGGAGAAACT+AGG - chr5_3:27074765-27074784 None:intergenic 40.0%
CCTAAAATCCACTATGTGCA+GGG - chr5_3:27075039-27075058 None:intergenic 40.0%
GCAGTTAAAATGGGACAATC+AGG + chr5_3:27075097-27075116 Msa0806790:intron 40.0%
!! TTGGCTTGGTGTAAACCATA+GGG + chr5_3:27075346-27075365 Msa0806790:intron 40.0%
! ACAGAGAGTAGTTTTCCCTA+TGG - chr5_3:27075364-27075383 None:intergenic 40.0%
AGGATTCATACAGAATCTGG+TGG + chr5_3:27075439-27075458 Msa0806790:CDS 40.0%
GGATTCATACAGAATCTGGT+GGG + chr5_3:27075440-27075459 Msa0806790:CDS 40.0%
TTGGCAGATGTACTATTGGT+AGG - chr5_3:27075469-27075488 None:intergenic 40.0%
TACCAATAGTACATCTGCCA+AGG + chr5_3:27075468-27075487 Msa0806790:CDS 40.0%
TACCTTGGCAGATGTACTAT+TGG - chr5_3:27075473-27075492 None:intergenic 40.0%
TCTGCCAAGGTAAGAATCAT+AGG + chr5_3:27075481-27075500 Msa0806790:intron 40.0%
CTGCCAAGGTAAGAATCATA+GGG + chr5_3:27075482-27075501 Msa0806790:intron 40.0%
TGCCAAGGTAAGAATCATAG+GGG + chr5_3:27075483-27075502 Msa0806790:intron 40.0%
TGAAAAACCTATGCAGTGCA+GGG + chr5_3:27075848-27075867 Msa0806790:three_prime_UTR 40.0%
!!! GTTTTTTGCGCGTTCTATCC+GGG - chr5_3:27067955-27067974 None:intergenic 45.0%
AGAAAAATCCTTAGGTCGGG+TGG - chr5_3:27069246-27069265 None:intergenic 45.0%
GTGAGAAGCAGTAGTGATTC+TGG - chr5_3:27069490-27069509 None:intergenic 45.0%
CTGTTGTGTCTGTTGTGGTT+TGG + chr5_3:27069676-27069695 Msa0806790:intron 45.0%
!! GCTTGAAGTAGTGTTGGTAG+GGG - chr5_3:27070014-27070033 None:intergenic 45.0%
!! AGGGGAGTATCTAGCTTAGT+TGG - chr5_3:27070121-27070140 None:intergenic 45.0%
GAAAGGACAGAAATGGAGCT+AGG + chr5_3:27070510-27070529 Msa0806790:intron 45.0%
!! GATGGTGATGGTGTTGTTGT+CGG - chr5_3:27071025-27071044 None:intergenic 45.0%
! TGGAAGAGACATGATGGTGA+TGG - chr5_3:27071037-27071056 None:intergenic 45.0%
!! ATGAAATCGTCGATTTCGGG+TGG - chr5_3:27071057-27071076 None:intergenic 45.0%
CAATCCATCGACCACTCATT+AGG + chr5_3:27071081-27071100 Msa0806790:CDS 45.0%
AAGACCTAATGAGTGGTCGA+TGG - chr5_3:27071088-27071107 None:intergenic 45.0%
AGATGGGAAGACCTAATGAG+TGG - chr5_3:27071095-27071114 None:intergenic 45.0%
AAGCTTGATGTCGAGGGTTT+GGG - chr5_3:27071121-27071140 None:intergenic 45.0%
! GTATGAAGCGTCTGTGAATG+CGG + chr5_3:27071333-27071352 Msa0806790:intron 45.0%
AGCGAAGTGTGAGAATCTGT+TGG + chr5_3:27071396-27071415 Msa0806790:CDS 45.0%
GCGAAGTGTGAGAATCTGTT+GGG + chr5_3:27071397-27071416 Msa0806790:CDS 45.0%
CGAAGTGTGAGAATCTGTTG+GGG + chr5_3:27071398-27071417 Msa0806790:CDS 45.0%
GCATTGTAGAGAACTGGAGA+AGG + chr5_3:27071420-27071439 Msa0806790:CDS 45.0%
TGGGATGTTGGAACGTGATT+TGG + chr5_3:27071531-27071550 Msa0806790:CDS 45.0%
GGCAAAGGGTGGTTACATAT+AGG + chr5_3:27072133-27072152 Msa0806790:intron 45.0%
AGGGTGGTTACATATAGGGA+CGG + chr5_3:27072138-27072157 Msa0806790:intron 45.0%
TGGTTACATATAGGGACGGA+GGG + chr5_3:27072142-27072161 Msa0806790:intron 45.0%
GATATTGTTGAGTGAGGGGA+AGG + chr5_3:27072201-27072220 Msa0806790:intron 45.0%
AGAGAGAGAGAGAGAGAGAA+GGG - chr5_3:27072467-27072486 None:intergenic 45.0%
TCTCTCTCTTTCTCAGAGAG+AGG + chr5_3:27072484-27072503 Msa0806790:intron 45.0%
CTCTCTCTTTCTCAGAGAGA+GGG + chr5_3:27072485-27072504 Msa0806790:intron 45.0%
TGACTGAGTAATTGCTGGGA+TGG + chr5_3:27072601-27072620 Msa0806790:intron 45.0%
TACACCCTGATGCTATACAG+TGG + chr5_3:27072625-27072644 Msa0806790:intron 45.0%
CCAAACCACTGTATAGCATC+AGG - chr5_3:27072633-27072652 None:intergenic 45.0%
CCTGATGCTATACAGTGGTT+TGG + chr5_3:27072630-27072649 Msa0806790:intron 45.0%
AGCAGTACCACAATTTGGCA+TGG - chr5_3:27073259-27073278 None:intergenic 45.0%
CTATCCACTAAATCACACCG+TGG + chr5_3:27074136-27074155 Msa0806790:intron 45.0%
TAAGCTCGAAAGAGCTGAAG+AGG + chr5_3:27074409-27074428 Msa0806790:CDS 45.0%
!! GAGAAACTAGGAAAGTGCTG+TGG - chr5_3:27074753-27074772 None:intergenic 45.0%
CTCCTCTATTAGGACAGTAG+CGG + chr5_3:27074770-27074789 Msa0806790:intron 45.0%
CTACATCAGCCATCAGAAAC+CGG - chr5_3:27074804-27074823 None:intergenic 45.0%
GGCTGATGTAGCAACAATAG+CGG + chr5_3:27074813-27074832 Msa0806790:intron 45.0%
!!! CCCTGCACATAGTGGATTTT+AGG + chr5_3:27075036-27075055 Msa0806790:intron 45.0%
GCCTAAAATCCACTATGTGC+AGG - chr5_3:27075040-27075059 None:intergenic 45.0%
TAACCTCGACAAAGCTGAAG+AGG + chr5_3:27075254-27075273 Msa0806790:CDS 45.0%
!! ATGGAATGACTGACTTGGCT+TGG + chr5_3:27075332-27075351 Msa0806790:intron 45.0%
!! CTTGGCTTGGTGTAAACCAT+AGG + chr5_3:27075345-27075364 Msa0806790:intron 45.0%
CACCCCTATGATTCTTACCT+TGG - chr5_3:27075488-27075507 None:intergenic 45.0%
AAGTAGCTCGATAGCGAAGA+AGG + chr5_3:27075616-27075635 Msa0806790:CDS 45.0%
! CTGCACTGCATAGGTTTTTC+AGG - chr5_3:27075849-27075868 None:intergenic 45.0%
CTGAAAAACCTATGCAGTGC+AGG + chr5_3:27075847-27075866 Msa0806790:three_prime_UTR 45.0%
AATCATTCCCTGCACTGCAT+AGG - chr5_3:27075858-27075877 None:intergenic 45.0%
!! TTAATTAATTAATAAAAAGA+GGG - chr5_3:27069328-27069347 None:intergenic 5.0%
!! ATTAATTAATTAATAAAAAG+AGG - chr5_3:27069329-27069348 None:intergenic 5.0%
!! AAAAAAATAATGTAAAAATA+AGG - chr5_3:27073651-27073670 None:intergenic 5.0%
AGGACGCGCGAAAAACTCAT+AGG - chr5_3:27067846-27067865 None:intergenic 50.0%
CCTGAACGGTCCATCAAACT+TGG - chr5_3:27068064-27068083 None:intergenic 50.0%
! CCAAGTTTGATGGACCGTTC+AGG + chr5_3:27068061-27068080 Msa0806790:intron 50.0%
! AAGGTTGGTTGTGGCCTGAA+CGG - chr5_3:27068078-27068097 None:intergenic 50.0%
TTGTGATGGTCCTCCAAGGT+TGG - chr5_3:27068093-27068112 None:intergenic 50.0%
CATGTTGTGATGGTCCTCCA+AGG - chr5_3:27068097-27068116 None:intergenic 50.0%
ACATTCGAACGAATGGGGTG+TGG + chr5_3:27068936-27068955 Msa0806790:intron 50.0%
GAACGAATGGGGTGTGGTTA+TGG + chr5_3:27068942-27068961 Msa0806790:intron 50.0%
GGGTGTGGTTATGGTGCATA+AGG + chr5_3:27068951-27068970 Msa0806790:intron 50.0%
! ACCCGTCTTAACAAGTGTCG+CGG + chr5_3:27069061-27069080 Msa0806790:intron 50.0%
! ACCGCGACACTTGTTAAGAC+GGG - chr5_3:27069065-27069084 None:intergenic 50.0%
! CACCGCGACACTTGTTAAGA+CGG - chr5_3:27069066-27069085 None:intergenic 50.0%
GGGAACTGTTGTGTCTGTTG+TGG + chr5_3:27069671-27069690 Msa0806790:intron 50.0%
CAGAAATGGAGCTAGGACCA+TGG + chr5_3:27070517-27070536 Msa0806790:intron 50.0%
GAGTCTGACAGATTGGACCA+TGG - chr5_3:27070537-27070556 None:intergenic 50.0%
TCCAATCTGTCAGACTCTGC+TGG + chr5_3:27070540-27070559 Msa0806790:intron 50.0%
TCCAGCAGAGTCTGACAGAT+TGG - chr5_3:27070544-27070563 None:intergenic 50.0%
TGTATGTAAGCTACCCCTGC+TGG + chr5_3:27070577-27070596 Msa0806790:intron 50.0%
TTCGGGTGGAAGAGACATGA+TGG - chr5_3:27071043-27071062 None:intergenic 50.0%
GAAGCTTGATGTCGAGGGTT+TGG - chr5_3:27071122-27071141 None:intergenic 50.0%
!! GTTGGGGCATTGTAGAGAAC+TGG + chr5_3:27071414-27071433 Msa0806790:CDS 50.0%
ATGAAGCTGAAGAAGGAGCG+AGG + chr5_3:27071491-27071510 Msa0806790:CDS 50.0%
TGTATCCCTCCGTCCCTATA+TGG + chr5_3:27072092-27072111 Msa0806790:intron 50.0%
TGGTTCCATATAGGGACGGA+GGG - chr5_3:27072100-27072119 None:intergenic 50.0%
AGGGTGGTTCCATATAGGGA+CGG - chr5_3:27072104-27072123 None:intergenic 50.0%
GTGGTTACATATAGGGACGG+AGG + chr5_3:27072141-27072160 Msa0806790:intron 50.0%
TGTTGAGTGAGGGGAAGGAA+AGG + chr5_3:27072206-27072225 Msa0806790:intron 50.0%
GTTGAGTGAGGGGAAGGAAA+GGG + chr5_3:27072207-27072226 Msa0806790:intron 50.0%
TGAGGGGAAGGAAAGGGAAA+GGG + chr5_3:27072213-27072232 Msa0806790:intron 50.0%
AGAGAGAGAGAGAAGGGATC+AGG - chr5_3:27072461-27072480 None:intergenic 50.0%
GAGAGAGAGAGAGAGAGAGA+AGG - chr5_3:27072468-27072487 None:intergenic 50.0%
TCTCTTTCTCAGAGAGAGGG+AGG + chr5_3:27072488-27072507 Msa0806790:intron 50.0%
CTCTTTCTCAGAGAGAGGGA+GGG + chr5_3:27072489-27072508 Msa0806790:intron 50.0%
TCTTTCTCAGAGAGAGGGAG+GGG + chr5_3:27072490-27072509 Msa0806790:intron 50.0%
! CAAATACTCAGTGACGGAGC+CGG - chr5_3:27072848-27072867 None:intergenic 50.0%
TGCTAAGTCAGGACCCAACT+TGG + chr5_3:27073275-27073294 Msa0806790:intron 50.0%
TCTTCTTCGGCAAGCACACA+TGG + chr5_3:27073454-27073473 Msa0806790:CDS 50.0%
CTTCTTCGGCAAGCACACAT+GGG + chr5_3:27073455-27073474 Msa0806790:CDS 50.0%
TTCTTCGGCAAGCACACATG+GGG + chr5_3:27073456-27073475 Msa0806790:CDS 50.0%
CTACATCAGCCAGTAGAAGC+CGG - chr5_3:27073839-27073858 None:intergenic 50.0%
GGCTGATGTAGCAACAGTAG+CGG + chr5_3:27073848-27073867 Msa0806790:intron 50.0%
AGCGGAACGCCTAAAATCCA+CGG - chr5_3:27074156-27074175 None:intergenic 50.0%
AAAGAGCTGAAGAGGAGGTG+AGG + chr5_3:27074417-27074436 Msa0806790:CDS 50.0%
TGACCTCCTTGACTCTCTTG+TGG + chr5_3:27074445-27074464 Msa0806790:CDS 50.0%
AAGCTGCTGTCAATGTGGAG+CGG + chr5_3:27073580-27073599 Msa0806790:CDS 50.0%
ATCCACTATGTGCAGGGAAG+AGG - chr5_3:27075033-27075052 None:intergenic 50.0%
ACAAAGCTGAAGAGGAGGTG+AGG + chr5_3:27075262-27075281 Msa0806790:intron 50.0%
CGAGCTACTTGTCTTGGAAC+TGG - chr5_3:27075606-27075625 None:intergenic 50.0%
CGCTATCGAGCTACTTGTCT+TGG - chr5_3:27075612-27075631 None:intergenic 50.0%
TTCGCGCGTCCTATGCAGTT+TGG + chr5_3:27067854-27067873 Msa0806790:intron 55.0%
ACGCTTGCGGGACTGTGAAT+TGG + chr5_3:27068016-27068035 Msa0806790:intron 55.0%
CTTGCGGGACTGTGAATTGG+TGG + chr5_3:27068019-27068038 Msa0806790:intron 55.0%
GTTCAGGCCACAACCAACCT+TGG + chr5_3:27068077-27068096 Msa0806790:intron 55.0%
! TGGTCCTCCAAGGTTGGTTG+TGG - chr5_3:27068087-27068106 None:intergenic 55.0%
! GCGACACTTGTTAAGACGGG+TGG - chr5_3:27069062-27069081 None:intergenic 55.0%
! CGTCTTAACAAGTGTCGCGG+TGG + chr5_3:27069064-27069083 Msa0806790:intron 55.0%
TCTGTTGACCACCCGACCTA+AGG + chr5_3:27069235-27069254 Msa0806790:intron 55.0%
CGAGAGTGAGAGAGCGATGA+GGG - chr5_3:27069528-27069547 None:intergenic 55.0%
!! AGTGTTGGTAGGGGCAGCTT+TGG - chr5_3:27070005-27070024 None:intergenic 55.0%
TCGAGGGTTTGGGAGGAGAT+GGG - chr5_3:27071111-27071130 None:intergenic 55.0%
CTTGATGTCGAGGGTTTGGG+AGG - chr5_3:27071118-27071137 None:intergenic 55.0%
GGCACGAAGCTTGATGTCGA+GGG - chr5_3:27071127-27071146 None:intergenic 55.0%
AGGCACGAAGCTTGATGTCG+AGG - chr5_3:27071128-27071147 None:intergenic 55.0%
! TGAAGCGTCTGTGAATGCGG+TGG + chr5_3:27071336-27071355 Msa0806790:CDS 55.0%
AGCTGAAGAAGGAGCGAGGA+AGG + chr5_3:27071495-27071514 Msa0806790:CDS 55.0%
GTGTTTGCGAGCTGGGATGT+TGG + chr5_3:27071519-27071538 Msa0806790:CDS 55.0%
GTGGTTCCATATAGGGACGG+AGG - chr5_3:27072101-27072120 None:intergenic 55.0%
GTGAGGGGAAGGAAAGGGAA+AGG + chr5_3:27072212-27072231 Msa0806790:intron 55.0%
CTTTCTCAGAGAGAGGGAGG+GGG + chr5_3:27072491-27072510 Msa0806790:intron 55.0%
TTTCTCAGAGAGAGGGAGGG+GGG + chr5_3:27072492-27072511 Msa0806790:intron 55.0%
GGGGGGAGAATATGCCGTAA+GGG + chr5_3:27072531-27072550 Msa0806790:intron 55.0%
! GGAGCCGGACTTCGAAGTTT+TGG - chr5_3:27072833-27072852 None:intergenic 55.0%
CGGCTCCGTCACTGAGTATT+TGG + chr5_3:27072846-27072865 Msa0806790:intron 55.0%
CTGTCAATGTGGAGCGAGTG+AGG + chr5_3:27073586-27073605 Msa0806790:intron 55.0%
! GAGAAACTAGGACGGTGTCG+TGG - chr5_3:27073791-27073810 None:intergenic 55.0%
GCTCGAAAGAGCTGAAGAGG+AGG + chr5_3:27074412-27074431 Msa0806790:CDS 55.0%
CTGCCACAAGAGAGTCAAGG+AGG - chr5_3:27074451-27074470 None:intergenic 55.0%
CTGCTGCCACAAGAGAGTCA+AGG - chr5_3:27074454-27074473 None:intergenic 55.0%
AGCTGCTGTCAATGTGGAGC+GGG + chr5_3:27073581-27073600 Msa0806790:CDS 55.0%
CTGTCAATGTGGAGCGGGTA+AGG + chr5_3:27074548-27074567 Msa0806790:intron 55.0%
GGCCGCTACTGTCCTAATAG+AGG - chr5_3:27074775-27074794 None:intergenic 55.0%
TGCCTCTTCCCTGCACATAG+TGG + chr5_3:27075028-27075047 Msa0806790:intron 55.0%
! CCTCCTCTTCAGCTTTGTCG+AGG - chr5_3:27075260-27075279 None:intergenic 55.0%
CCTCGACAAAGCTGAAGAGG+AGG + chr5_3:27075257-27075276 Msa0806790:CDS 55.0%
! TGGTGGTGACGACATGTGCA+GGG - chr5_3:27075677-27075696 None:intergenic 55.0%
! ATGGTGGTGACGACATGTGC+AGG - chr5_3:27075678-27075697 None:intergenic 55.0%
CAGGCCACAACCAACCTTGG+AGG + chr5_3:27068080-27068099 Msa0806790:intron 60.0%
TGAGAGAGCGATGAGGGAGG+CGG - chr5_3:27069522-27069541 None:intergenic 60.0%
GAGTGAGAGAGCGATGAGGG+AGG - chr5_3:27069525-27069544 None:intergenic 60.0%
GCGAGAGTGAGAGAGCGATG+AGG - chr5_3:27069529-27069548 None:intergenic 60.0%
CATCGCTCTCTCACTCTCGC+CGG + chr5_3:27069529-27069548 Msa0806790:CDS 60.0%
CTCACTCTCGCCGGAACCTA+AGG + chr5_3:27069538-27069557 Msa0806790:CDS 60.0%
GTCGAGGGTTTGGGAGGAGA+TGG - chr5_3:27071112-27071131 None:intergenic 60.0%
! AGGAAGGCGTGTTTGCGAGC+TGG + chr5_3:27071511-27071530 Msa0806790:CDS 60.0%
! GGAAGGCGTGTTTGCGAGCT+GGG + chr5_3:27071512-27071531 Msa0806790:CDS 60.0%
AAGGGATCAGGTTCCTCCGC+AGG - chr5_3:27072449-27072468 None:intergenic 60.0%
TTCTCAGAGAGAGGGAGGGG+GGG + chr5_3:27072493-27072512 Msa0806790:intron 60.0%
GGGGGGGAGAATATGCCGTA+AGG + chr5_3:27072530-27072549 Msa0806790:intron 60.0%
TTCGGCAAGCACACATGGGG+AGG + chr5_3:27073459-27073478 Msa0806790:CDS 60.0%
GCCAGTAGAAGCCGGAACAG+CGG - chr5_3:27073831-27073850 None:intergenic 60.0%
GCCACTGCTCCGGTTTCTGA+TGG + chr5_3:27074792-27074811 Msa0806790:intron 60.0%
GCCATCAGAAACCGGAGCAG+TGG - chr5_3:27074796-27074815 None:intergenic 60.0%
TCTCAGAGAGAGGGAGGGGG+GGG + chr5_3:27072494-27072513 Msa0806790:intron 65.0%
GGCAATAGCGGCCGCTGTTC+CGG + chr5_3:27073817-27073836 Msa0806790:intron 65.0%
GCCGCTGTTCCGGCTTCTAC+TGG + chr5_3:27073827-27073846 Msa0806790:intron 65.0%
GACAGTAGCGGCCACTGCTC+CGG + chr5_3:27074782-27074801 Msa0806790:intron 65.0%
AGCGATGAGGGAGGCGGCGA+CGG - chr5_3:27069516-27069535 None:intergenic 70.0%
CTCAGAGAGAGGGAGGGGGG+GGG + chr5_3:27072495-27072514 Msa0806790:intron 70.0%
TCAGAGAGAGGGAGGGGGGG+GGG + chr5_3:27072496-27072515 Msa0806790:intron 70.0%
CAGAGAGAGGGAGGGGGGGG+GGG + chr5_3:27072497-27072516 Msa0806790:intron 75.0%
AGAGAGAGGGAGGGGGGGGG+GGG + chr5_3:27072498-27072517 Msa0806790:intron 75.0%
! GAGAGAGGGAGGGGGGGGGG+GGG + chr5_3:27072499-27072518 Msa0806790:intron 80.0%
! AGAGAGGGAGGGGGGGGGGG+GGG + chr5_3:27072500-27072519 Msa0806790:intron 80.0%
! GAGAGGGAGGGGGGGGGGGG+GGG + chr5_3:27072501-27072520 Msa0806790:intron 85.0%
! AGAGGGAGGGGGGGGGGGGG+GGG + chr5_3:27072502-27072521 Msa0806790:intron 85.0%
! GAGGGAGGGGGGGGGGGGGG+GGG + chr5_3:27072503-27072522 Msa0806790:intron 90.0%
! AGGGAGGGGGGGGGGGGGGG+GGG + chr5_3:27072504-27072523 Msa0806790:intron 90.0%
! GGGAGGGGGGGGGGGGGGGG+GGG + chr5_3:27072505-27072524 Msa0806790:intron 95.0%
! GGAGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072506-27072525 Msa0806790:intron 95.0%
! GAGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072507-27072526 Msa0806790:intron 95.0%
! AGGGGGGGGGGGGGGGGGGG+GGG + chr5_3:27072508-27072527 Msa0806790:intron 95.0%
Chromosome Type Strat End Strand Name
chr5_3 gene 27067688 27075930 27067688 ID=Msa0806790;Name=Msa0806790
chr5_3 mRNA 27067688 27075930 27067688 ID=Msa0806790-mRNA-1;Parent=Msa0806790;Name=Msa0806790-mRNA-1;_AED=0.25;_eAED=0.25;_QI=0|0.62|0.66|0.88|0.75|0.66|9|257|435
chr5_3 exon 27067688 27067693 27067688 ID=Msa0806790-mRNA-1:exon:9686;Parent=Msa0806790-mRNA-1
chr5_3 exon 27069444 27069559 27069444 ID=Msa0806790-mRNA-1:exon:9687;Parent=Msa0806790-mRNA-1
chr5_3 exon 27071005 27071236 27071005 ID=Msa0806790-mRNA-1:exon:9688;Parent=Msa0806790-mRNA-1
chr5_3 exon 27071334 27071600 27071334 ID=Msa0806790-mRNA-1:exon:9689;Parent=Msa0806790-mRNA-1
chr5_3 exon 27073448 27073602 27073448 ID=Msa0806790-mRNA-1:exon:9690;Parent=Msa0806790-mRNA-1
chr5_3 exon 27074328 27074564 27074328 ID=Msa0806790-mRNA-1:exon:9691;Parent=Msa0806790-mRNA-1
chr5_3 exon 27075194 27075278 27075194 ID=Msa0806790-mRNA-1:exon:9692;Parent=Msa0806790-mRNA-1
chr5_3 exon 27075367 27075489 27075367 ID=Msa0806790-mRNA-1:exon:9693;Parent=Msa0806790-mRNA-1
chr5_3 exon 27075587 27075930 27075587 ID=Msa0806790-mRNA-1:exon:9694;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27067688 27067693 27067688 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27069444 27069559 27069444 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27071005 27071236 27071005 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27071334 27071600 27071334 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27073448 27073602 27073448 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27074328 27074564 27074328 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27075194 27075278 27075194 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27075367 27075489 27075367 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 CDS 27075587 27075673 27075587 ID=Msa0806790-mRNA-1:cds;Parent=Msa0806790-mRNA-1
chr5_3 three_prime_UTR 27075674 27075930 27075674 ID=Msa0806790-mRNA-1:three_prime_utr;Parent=Msa0806790-mRNA-1
Gene Sequence

>Msa0806790

ATGGTGTACTTCTCACTTTATCGTAACTTCATCACTGAACTCACTCTCGCCAGAATCACTACTGCTTCTCACTCGCCGTCGCCGCCTCCCTCATCGCTCTCTCACTCTCGCCGGAACCTAAGTGTATCTTTCATCATCACCGACAACAACACCATCACCATCATGTCTCTTCCACCCGAAATCGACGATTTCATCAAACAATCCATCGACCACTCATTAGGTCTTCCCATCTCCTCCCAAACCCTCGACATCAAGCTTCGTGCCTCGAAAGAAATCGAACAAAATCTTCGCGATCAGAACACTTCACTCCTTCAAAAACTAAAACAAAAAGACGAACTCATTGAACAATCCAAGTATGAAGCGTCTGTGAATGCGGTGGCGATAAAGAAGTTTGTTGAGGAGAATCAGAAATTGGCAGCGAAGTGTGAGAATCTGTTGGGGCATTGTAGAGAACTGGAGAAGGAATGTGCTTTGTATGATAATGATAGAGAAGCTTTGATTGATTTTCAAAATGAAGCTGAAGAAGGAGCGAGGAAGGCGTGTTTGCGAGCTGGGATGTTGGAACGTGATTTGGCTATGTATCAATTAGAGTTGAAGAAATGTCGCCATGAGATTGAATCGGTTGACTCTTCTTCGGCAAGCACACATGGGGAGGAAAGTTTGCTCGACTCTCTTTTGGCAACAGTTACTACTAAAGATGAGTCTTCTACATATGAATTCTTGGTTGCAAATAGTGAAAACAAGCACTGTAAAAAGCTGCTGTCAATGTGGAGCGACTTAAAACAATCAACTCGGAGAGTATTGTCTCTCGTTGCTGAATTGATGTCTCTAGAAAAGGACAAAGAGCATCTAAGGATTAAGCTCGAAAGAGCTGAAGAGGAGGTGAGGATTGCTGACCTCCTTGACTCTCTTGTGGCAGCAGTTATTACTAAAGACGAGTCTTCTACATATGGATTCTTGGTTGCAAATAGTGAAAATGAGCATTGTAAAAAGCTGCTGTCAATGTGGAGCGGATTATTGTCTCTTGTTGCTGAATTGATGTCTCTAGAAAAGGACAAAGAGCATCTAAGGATTAACCTCGACAAAGCTGAAGAGGAGGGAAAACTACTCTCTGTTGAAAATAGCATATTGAAAAAGGAGAACAGAAGGTTAGTGATGAAATACATGGAAAGGATTCATACAGAATCTGGTGGGAAGCCTACCAATAGTACATCTGCCAAGTCAAACAAGAGAAAGTCCAGTTCCAAGACAAGTAGCTCGATAGCGAAGAAGGTTGATTTTGATGATTTAGATTCACTTGCAAAGTAA

Protein sequence

>Msa0806790

MVYFSLYRNFITELTLARITTASHSPSPPPSSLSHSRRNLSVSFIITDNNTITIMSLPPEIDDFIKQSIDHSLGLPISSQTLDIKLRASKEIEQNLRDQNTSLLQKLKQKDELIEQSKYEASVNAVAIKKFVEENQKLAAKCENLLGHCRELEKECALYDNDREALIDFQNEAEEGARKACLRAGMLERDLAMYQLELKKCRHEIESVDSSSASTHGEESLLDSLLATVTTKDESSTYEFLVANSENKHCKKLLSMWSDLKQSTRRVLSLVAELMSLEKDKEHLRIKLERAEEEVRIADLLDSLVAAVITKDESSTYGFLVANSENEHCKKLLSMWSGLLSLVAELMSLEKDKEHLRINLDKAEEEGKLLSVENSILKKENRRLVMKYMERIHTESGGKPTNSTSAKSNKRKSSSKTSSSIAKKVDFDDLDSLAK*