Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011600 | MCH80505.1 | 60.769 | 130 | 51 | 0 | 2 | 131 | 150 | 279 | 5.38e-53 | 179 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011600 | A0A392LZU8 | 60.769 | 130 | 51 | 0 | 2 | 131 | 150 | 279 | 2.57e-53 | 179 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1011600 | Msa1011610 | 0.839081 | 1.960693e-57 | -8.615850e-47 |
| Msa1011600 | Msa1095680 | 0.896823 | 2.547840e-76 | -8.615850e-47 |
| Msa1011600 | Msa1095690 | 0.899198 | 2.513562e-77 | -8.615850e-47 |
| Msa1011600 | Msa1142760 | 0.881783 | 1.800992e-70 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011600 | MtrunA17_Chr0c01g0489381 | 59.542 | 131 | 53 | 0 | 1 | 131 | 319 | 449 | 9.42e-52 | 169 |
| Msa1011600 | MtrunA17_Chr5g0406671 | 34.884 | 129 | 84 | 0 | 4 | 132 | 369 | 497 | 4.19e-25 | 99.0 |
| Msa1011600 | MtrunA17_Chr3g0086461 | 36.207 | 116 | 71 | 3 | 1 | 114 | 130 | 244 | 1.17e-13 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 29 sgRNAs with CRISPR-Local
Find 321 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTTAGACTCCTACTTTA+AGG | 0.132540 | 7_1:-16226408 | Msa1011600:CDS |
| ATAAACTTTATCAGCCAATT+TGG | 0.206764 | 7_1:+16226238 | None:intergenic |
| AGTCTAAATGGTAAATCTTT+TGG | 0.213515 | 7_1:+16226420 | None:intergenic |
| GGCTGCTGCACTATCCAAAT+TGG | 0.286697 | 7_1:-16226252 | Msa1011600:CDS |
| CCTTAAAGTAGGAGTCTAAA+TGG | 0.356804 | 7_1:+16226408 | None:intergenic |
| GCCAATACTCCCTTGCTTTG+CGG | 0.374050 | 7_1:+16222116 | None:intergenic |
| CAATGACTGATTTCCACTAC+TGG | 0.416742 | 7_1:-16226193 | Msa1011600:CDS |
| GGATACCCAACTATAGGAAT+AGG | 0.435343 | 7_1:-16226151 | Msa1011600:intron |
| CCATTGGGATACCCAACTAT+AGG | 0.436344 | 7_1:-16226157 | Msa1011600:CDS |
| CTACTTTAAGGAAGAAGCCT+TGG | 0.449396 | 7_1:-16226396 | Msa1011600:CDS |
| TTGGCTGATAAAGTTTATGA+AGG | 0.461838 | 7_1:-16226233 | Msa1011600:CDS |
| CAAGGCTTCTTCCTTAAAGT+AGG | 0.470681 | 7_1:+16226397 | None:intergenic |
| TGGGACATTGTCAATGCCAT+TGG | 0.475048 | 7_1:-16226173 | Msa1011600:CDS |
| TTTAAAACGTCTTTCTTCCA+AGG | 0.477879 | 7_1:+16226379 | None:intergenic |
| TACTCACAATTTGGTTGGAG+TGG | 0.481690 | 7_1:-16222310 | Msa1011600:intron |
| TCCGCAAAGCAAGGGAGTAT+TGG | 0.511594 | 7_1:-16222117 | Msa1011600:CDS |
| GGGACATTGTCAATGCCATT+GGG | 0.520950 | 7_1:-16226172 | Msa1011600:CDS |
| ATGATCTCATCCGCAAAGCA+AGG | 0.558816 | 7_1:-16222126 | Msa1011600:CDS |
| CATTGACAATGTCCCAGTAG+TGG | 0.574874 | 7_1:+16226180 | None:intergenic |
| TGGCTGATAAAGTTTATGAA+GGG | 0.575393 | 7_1:-16226232 | Msa1011600:CDS |
| CAACTCGGCATTATGTGTAG+TGG | 0.586511 | 7_1:-16222358 | Msa1011600:CDS |
| CTTTGGTTAATCAACACCGT+TGG | 0.595113 | 7_1:+16222084 | None:intergenic |
| CCTATAGTTGGGTATCCCAA+TGG | 0.599639 | 7_1:+16226157 | None:intergenic |
| ATTCCTTCACAGCGACAACT+CGG | 0.610073 | 7_1:-16222373 | Msa1011600:intron |
| AATGACTGATTTCCACTACT+GGG | 0.612793 | 7_1:-16226192 | Msa1011600:CDS |
| TGATCTCATCCGCAAAGCAA+GGG | 0.613435 | 7_1:-16222125 | Msa1011600:CDS |
| CGGCATTATGTGTAGTGGAG+TGG | 0.617826 | 7_1:-16222353 | Msa1011600:CDS |
| GATCATTGTTGCACTCGTTG+TGG | 0.630742 | 7_1:+16222143 | None:intergenic |
| TATTGGCAATTGATGACCAA+CGG | 0.647837 | 7_1:-16222100 | Msa1011600:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGTATAATTGAAAATATATA+AGG | + | chr7_1:16222216-16222235 | None:intergenic | 10.0% |
| !!! | AGTTTTTAATAATTTTTTTC+AGG | - | chr7_1:16222965-16222984 | Msa1011600:intron | 10.0% |
| !! | AGAAAAATTTCATTAATTAA+AGG | + | chr7_1:16224733-16224752 | None:intergenic | 10.0% |
| !!! | ATATCATATTTATCTTTTTT+AGG | - | chr7_1:16226059-16226078 | Msa1011600:intron | 10.0% |
| !! | TTAAAATAAGAAACATTGTA+AGG | - | chr7_1:16222157-16222176 | Msa1011600:CDS | 15.0% |
| !! | AAAATGGTATTTAATATGTT+TGG | - | chr7_1:16222454-16222473 | Msa1011600:intron | 15.0% |
| !! | TAAAATTCATTGGATTAAAT+GGG | - | chr7_1:16224306-16224325 | Msa1011600:intron | 15.0% |
| !! | TTATGTAAAGAAAAAAAGAA+AGG | - | chr7_1:16224334-16224353 | Msa1011600:intron | 15.0% |
| !!! | TAGAAATAAAAAATGTTTTG+AGG | - | chr7_1:16225275-16225294 | Msa1011600:intron | 15.0% |
| !!! | AGAAATAAAAAATGTTTTGA+GGG | - | chr7_1:16225276-16225295 | Msa1011600:intron | 15.0% |
| !!! | TAATTTTAATAGTGCTAATA+CGG | - | chr7_1:16225350-16225369 | Msa1011600:intron | 15.0% |
| !!! | ATATGATATATCAATTTTCT+TGG | + | chr7_1:16226048-16226067 | None:intergenic | 15.0% |
| !! | TATTACAACATTTGTGATTT+AGG | - | chr7_1:16222245-16222264 | Msa1011600:intron | 20.0% |
| !!! | GTTGTTTTGAAAATGATTTT+GGG | + | chr7_1:16222407-16222426 | None:intergenic | 20.0% |
| !!! | AGTTGTTTTGAAAATGATTT+TGG | + | chr7_1:16222408-16222427 | None:intergenic | 20.0% |
| !!! | AAGTTTTCATCTTAAAAAGA+GGG | - | chr7_1:16222429-16222448 | Msa1011600:intron | 20.0% |
| !! | AATAAATCCAAATACGAAAA+TGG | + | chr7_1:16222637-16222656 | None:intergenic | 20.0% |
| !!! | GTATTTGGATTTATTGTTTT+TGG | - | chr7_1:16222642-16222661 | Msa1011600:intron | 20.0% |
| !! | GTTCAATACTAATATTTACA+GGG | - | chr7_1:16222685-16222704 | Msa1011600:intron | 20.0% |
| !! | TTCAATACTAATATTTACAG+GGG | - | chr7_1:16222686-16222705 | Msa1011600:intron | 20.0% |
| !! | TCATAGAAAATCTAGAAATT+GGG | - | chr7_1:16222884-16222903 | Msa1011600:intron | 20.0% |
| !!! | CTTTATTTTATCAACAGTTT+TGG | - | chr7_1:16223162-16223181 | Msa1011600:intron | 20.0% |
| !! | TAACAAAAACAATTGCTAAT+AGG | - | chr7_1:16223354-16223373 | Msa1011600:intron | 20.0% |
| !! | AAAAAAAACAAAGGTAAGAA+GGG | - | chr7_1:16223488-16223507 | Msa1011600:intron | 20.0% |
| !!! | AATTTTTAATTGCATTTCCA+CGG | - | chr7_1:16223619-16223638 | Msa1011600:intron | 20.0% |
| !!! | AAAATTTTTTGTCAATTGCT+GGG | - | chr7_1:16224146-16224165 | Msa1011600:intron | 20.0% |
| !!! | AAAGCATGATTAACAAATTT+TGG | - | chr7_1:16224260-16224279 | Msa1011600:intron | 20.0% |
| !! | GTAAAATTCATTGGATTAAA+TGG | - | chr7_1:16224305-16224324 | Msa1011600:intron | 20.0% |
| !! | AACATAATATCACAATTAGA+AGG | + | chr7_1:16224667-16224686 | None:intergenic | 20.0% |
| !!! | TTAAAAAGATCATTTTTGAG+TGG | + | chr7_1:16225012-16225031 | None:intergenic | 20.0% |
| !! | GTTGAAAAGAATTATTATTG+AGG | - | chr7_1:16225197-16225216 | Msa1011600:intron | 20.0% |
| !! | AATTATTATTGAGGAAAATG+AGG | - | chr7_1:16225206-16225225 | Msa1011600:intron | 20.0% |
| !!! | GAAATAAAAAATGTTTTGAG+GGG | - | chr7_1:16225277-16225296 | Msa1011600:intron | 20.0% |
| !! | AAATTTCATTAACAAAAGTC+TGG | + | chr7_1:16225906-16225925 | None:intergenic | 20.0% |
| !! | AAAACACATATTAACGAAAA+TGG | - | chr7_1:16225946-16225965 | Msa1011600:intron | 20.0% |
| !!! | ACATAAACATCTAGTTTATT+AGG | - | chr7_1:16225984-16226003 | Msa1011600:intron | 20.0% |
| !! | ATTAGTGTATAAAAACTAAG+TGG | + | chr7_1:16226010-16226029 | None:intergenic | 20.0% |
| !!! | AAACAATTTTACTCACAATT+TGG | - | chr7_1:16226199-16226218 | Msa1011600:CDS | 20.0% |
| !! | GTCTAAATGGTAAATCTTTT+GGG | + | chr7_1:16222100-16222119 | None:intergenic | 25.0% |
| !! | AGTCTAAATGGTAAATCTTT+TGG | + | chr7_1:16222101-16222120 | None:intergenic | 25.0% |
| ! | ATAAACTTTATCAGCCAATT+TGG | + | chr7_1:16222283-16222302 | None:intergenic | 25.0% |
| !! | TTTTACCTATTCCTATAGTT+GGG | + | chr7_1:16222375-16222394 | None:intergenic | 25.0% |
| !! | ATTTTACCTATTCCTATAGT+TGG | + | chr7_1:16222376-16222395 | None:intergenic | 25.0% |
| !! | CAAGTTTTCATCTTAAAAAG+AGG | - | chr7_1:16222428-16222447 | Msa1011600:intron | 25.0% |
| ! | TCTTAAAAAGAGGGAAAAAA+TGG | - | chr7_1:16222438-16222457 | Msa1011600:intron | 25.0% |
| !! | TTGATAGTAATGGTATGTTT+AGG | - | chr7_1:16222481-16222500 | Msa1011600:intron | 25.0% |
| ! | TGGAAAAACTAAGAAATATC+AGG | + | chr7_1:16222617-16222636 | None:intergenic | 25.0% |
| !! | AGTTTTTCCATTTTCGTATT+TGG | - | chr7_1:16222627-16222646 | Msa1011600:intron | 25.0% |
| ! | TTGGTTAAAGCTGAATAAAA+AGG | - | chr7_1:16222661-16222680 | Msa1011600:intron | 25.0% |
| ! | TGGTTAAAGCTGAATAAAAA+GGG | - | chr7_1:16222662-16222681 | Msa1011600:intron | 25.0% |
| ! | GGTTCAATACTAATATTTAC+AGG | - | chr7_1:16222684-16222703 | Msa1011600:intron | 25.0% |
| ! | TTTAGGTAAGTGAACTAAAA+TGG | - | chr7_1:16222746-16222765 | Msa1011600:intron | 25.0% |
| ! | CTCATAGAAAATCTAGAAAT+TGG | - | chr7_1:16222883-16222902 | Msa1011600:intron | 25.0% |
| !!! | ATGAGGTTTTAAGTTTTTAG+CGG | + | chr7_1:16223114-16223133 | None:intergenic | 25.0% |
| !! | AACTGTTGATAAAATAAAGC+AGG | + | chr7_1:16223161-16223180 | None:intergenic | 25.0% |
| ! | TAAGTGTAATTAATGTCACT+AGG | + | chr7_1:16223248-16223267 | None:intergenic | 25.0% |
| !! | TGAAATTTTCCAATGATATC+AGG | + | chr7_1:16223395-16223414 | None:intergenic | 25.0% |
| ! | AAAAGATTCAAAAGCTAGTA+AGG | + | chr7_1:16223456-16223475 | None:intergenic | 25.0% |
| !! | TTGAATCTTTTCATTACATG+AGG | - | chr7_1:16223465-16223484 | Msa1011600:intron | 25.0% |
| ! | TACATGAGGAAAAAAAACAA+AGG | - | chr7_1:16223479-16223498 | Msa1011600:intron | 25.0% |
| ! | GAAAAAAAACAAAGGTAAGA+AGG | - | chr7_1:16223487-16223506 | Msa1011600:intron | 25.0% |
| ! | AAAAAAACAAAGGTAAGAAG+GGG | - | chr7_1:16223489-16223508 | Msa1011600:intron | 25.0% |
| ! | ATGGAATTAAAATTGCTAGA+GGG | - | chr7_1:16223798-16223817 | Msa1011600:intron | 25.0% |
| !! | AACAAAATTTTACGATCATC+AGG | + | chr7_1:16223989-16224008 | None:intergenic | 25.0% |
| !!! | GAAAATTTTTTGTCAATTGC+TGG | - | chr7_1:16224145-16224164 | Msa1011600:intron | 25.0% |
| !!! | AGAAGTTTTAATCAAATCAG+TGG | - | chr7_1:16224171-16224190 | Msa1011600:intron | 25.0% |
| !!! | CATGATTAACAAATTTTGGT+GGG | - | chr7_1:16224264-16224283 | Msa1011600:intron | 25.0% |
| !!! | ATGATTAACAAATTTTGGTG+GGG | - | chr7_1:16224265-16224284 | Msa1011600:intron | 25.0% |
| ! | TGTAAAGAAAAAAAGAAAGG+TGG | - | chr7_1:16224337-16224356 | Msa1011600:intron | 25.0% |
| ! | ACATTGCAAAGTTAAAATCA+TGG | + | chr7_1:16224381-16224400 | None:intergenic | 25.0% |
| !! | ATATCACAATTAGAAGGTTT+TGG | + | chr7_1:16224661-16224680 | None:intergenic | 25.0% |
| ! | AACAATTTCACATCTCTTTA+TGG | - | chr7_1:16225083-16225102 | Msa1011600:intron | 25.0% |
| ! | GGAAATTATAGTTAATGTGT+TGG | - | chr7_1:16225227-16225246 | Msa1011600:intron | 25.0% |
| !!! | GTTTTTTCTGAATCTTATAG+CGG | - | chr7_1:16225632-16225651 | Msa1011600:intron | 25.0% |
| ! | ATAATAGATCCAACATAGTT+GGG | + | chr7_1:16225708-16225727 | None:intergenic | 25.0% |
| ! | AATAATAGATCCAACATAGT+TGG | + | chr7_1:16225709-16225728 | None:intergenic | 25.0% |
| ! | AACTATGTTGGATCTATTAT+TGG | - | chr7_1:16225708-16225727 | Msa1011600:intron | 25.0% |
| !! | AATTTTACTCACAATTTGGT+TGG | - | chr7_1:16226203-16226222 | Msa1011600:CDS | 25.0% |
| ! | TTTAAAACGTCTTTCTTCCA+AGG | + | chr7_1:16222142-16222161 | None:intergenic | 30.0% |
| TTGGCTGATAAAGTTTATGA+AGG | - | chr7_1:16222285-16222304 | Msa1011600:intron | 30.0% | |
| TGGCTGATAAAGTTTATGAA+GGG | - | chr7_1:16222286-16222305 | Msa1011600:intron | 30.0% | |
| ! | GTTTGGACTATTGATAGTAA+TGG | - | chr7_1:16222471-16222490 | Msa1011600:intron | 30.0% |
| ! | CATTGCATAATACTCTAAGA+TGG | - | chr7_1:16222567-16222586 | Msa1011600:intron | 30.0% |
| AAGAAATATCAGGAAAGACA+AGG | + | chr7_1:16222607-16222626 | None:intergenic | 30.0% | |
| GGTTAAAGCTGAATAAAAAG+GGG | - | chr7_1:16222663-16222682 | Msa1011600:intron | 30.0% | |
| ! | AACTAAAAGTGACAGGTTTT+AGG | - | chr7_1:16222729-16222748 | Msa1011600:intron | 30.0% |
| TAGAAAATCTAGAAATTGGG+TGG | - | chr7_1:16222887-16222906 | Msa1011600:intron | 30.0% | |
| ACAGTTTCAGAAATTCTTTC+AGG | + | chr7_1:16223011-16223030 | None:intergenic | 30.0% | |
| !! | TGAAAGAATTTCTGAAACTG+TGG | - | chr7_1:16223010-16223029 | Msa1011600:intron | 30.0% |
| AGATTCTATGCGTAACATAT+TGG | - | chr7_1:16223055-16223074 | Msa1011600:intron | 30.0% | |
| !!! | GCTTTTTCTTTTTTGGAATG+AGG | + | chr7_1:16223277-16223296 | None:intergenic | 30.0% |
| ACTACATTGCAAAGAGAAAT+AGG | + | chr7_1:16223323-16223342 | None:intergenic | 30.0% | |
| !! | ATTTCAAAGTGCTTTTGTAC+CGG | - | chr7_1:16223409-16223428 | Msa1011600:intron | 30.0% |
| TTATCAGTAATTAATCGTCC+CGG | + | chr7_1:16223431-16223450 | None:intergenic | 30.0% | |
| ACTAAAGTTGGATATGTCAA+AGG | - | chr7_1:16223520-16223539 | Msa1011600:intron | 30.0% | |
| !!! | CGAGTGGAATTTTTTGATAA+AGG | - | chr7_1:16223556-16223575 | Msa1011600:intron | 30.0% |
| ! | CTATGGGTTTTTCACAAAAA+TGG | - | chr7_1:16223588-16223607 | Msa1011600:intron | 30.0% |
| ATAAATAGGTAAGGAGACAA+AGG | + | chr7_1:16223719-16223738 | None:intergenic | 30.0% | |
| GCACATAAGATAAATAGGTA+AGG | + | chr7_1:16223728-16223747 | None:intergenic | 30.0% | |
| ! | TTTTTCTGGGCTTCTAAATA+AGG | - | chr7_1:16223754-16223773 | Msa1011600:intron | 30.0% |
| CATGGAATTAAAATTGCTAG+AGG | - | chr7_1:16223797-16223816 | Msa1011600:intron | 30.0% | |
| TGGAATTAAAATTGCTAGAG+GGG | - | chr7_1:16223799-16223818 | Msa1011600:intron | 30.0% | |
| !!! | ATGATAGCCTCATTTTTTGT+AGG | - | chr7_1:16223852-16223871 | Msa1011600:intron | 30.0% |
| !!! | TGATAGCCTCATTTTTTGTA+GGG | - | chr7_1:16223853-16223872 | Msa1011600:intron | 30.0% |
| AAGAATCCCTACAAAAAATG+AGG | + | chr7_1:16223862-16223881 | None:intergenic | 30.0% | |
| AATTCTTATCAATCTGCTTC+TGG | - | chr7_1:16223914-16223933 | Msa1011600:intron | 30.0% | |
| TTCTGGTCAACTTATCAATT+TGG | - | chr7_1:16223931-16223950 | Msa1011600:intron | 30.0% | |
| ! | GATCGTAAAATTTTGTTCCA+AGG | - | chr7_1:16223992-16224011 | Msa1011600:intron | 30.0% |
| ! | GTAAAATTTTGTTCCAAGGT+TGG | - | chr7_1:16223996-16224015 | Msa1011600:intron | 30.0% |
| ! | TTTCGATTTTGTCCAAGATA+AGG | - | chr7_1:16224096-16224115 | Msa1011600:intron | 30.0% |
| ! | GCATGATTAACAAATTTTGG+TGG | - | chr7_1:16224263-16224282 | Msa1011600:intron | 30.0% |
| AGAAAAAAAGAAAGGTGGAA+TGG | - | chr7_1:16224342-16224361 | Msa1011600:intron | 30.0% | |
| GAAAAAAAGAAAGGTGGAAT+GGG | - | chr7_1:16224343-16224362 | Msa1011600:intron | 30.0% | |
| AAAAAAAGAAAGGTGGAATG+GGG | - | chr7_1:16224344-16224363 | Msa1011600:intron | 30.0% | |
| CAATGTTGTCTAAACAAAGT+TGG | - | chr7_1:16224395-16224414 | Msa1011600:intron | 30.0% | |
| GTTATTGTCCAAGTTATACT+TGG | - | chr7_1:16224506-16224525 | Msa1011600:intron | 30.0% | |
| ATACTTCTCCAAGTATAACT+TGG | + | chr7_1:16224517-16224536 | None:intergenic | 30.0% | |
| ! | TTATTGAGAAAGCATGTCTT+TGG | - | chr7_1:16224557-16224576 | Msa1011600:intron | 30.0% |
| ATGGTCACCTAATTCATATA+TGG | - | chr7_1:16224590-16224609 | Msa1011600:intron | 30.0% | |
| TGGTCACCTAATTCATATAT+GGG | - | chr7_1:16224591-16224610 | Msa1011600:intron | 30.0% | |
| ! | AATTGGCTTCCTTATCAAAA+TGG | - | chr7_1:16224619-16224638 | Msa1011600:intron | 30.0% |
| !! | ATCTTGTGACCATTTTGATA+AGG | + | chr7_1:16224631-16224650 | None:intergenic | 30.0% |
| ATCAAAATGGTCACAAGATT+TGG | - | chr7_1:16224632-16224651 | Msa1011600:intron | 30.0% | |
| TGTGATTGAGAGAAAGAAAT+TGG | + | chr7_1:16224787-16224806 | None:intergenic | 30.0% | |
| !!! | ACAATTTTTTCCAAACTTGC+TGG | + | chr7_1:16224927-16224946 | None:intergenic | 30.0% |
| AGCAAGTTTGGAAAAAATTG+TGG | - | chr7_1:16224926-16224945 | Msa1011600:intron | 30.0% | |
| !!! | ATCCATTGTGTGTTTTTTGT+GGG | - | chr7_1:16225049-16225068 | Msa1011600:intron | 30.0% |
| ! | ATCTCTTTATGGATTGTCAT+TGG | - | chr7_1:16225094-16225113 | Msa1011600:intron | 30.0% |
| TGTTCAATTCACATGATTCT+AGG | - | chr7_1:16225154-16225173 | Msa1011600:intron | 30.0% | |
| ! | TAATTCTTTTCAACCACTCT+TGG | + | chr7_1:16225191-16225210 | None:intergenic | 30.0% |
| ACATCAGATATAGGTAAGTT+TGG | + | chr7_1:16225402-16225421 | None:intergenic | 30.0% | |
| TAGCTTATAGCAACCATTAT+CGG | + | chr7_1:16225439-16225458 | None:intergenic | 30.0% | |
| ATTGTTGTGAGAGATTATGA+AGG | - | chr7_1:16225507-16225526 | Msa1011600:intron | 30.0% | |
| TTCATAATCCCGATTGTATA+TGG | - | chr7_1:16225829-16225848 | Msa1011600:intron | 30.0% | |
| TCTTCAATCCATATACAATC+GGG | + | chr7_1:16225840-16225859 | None:intergenic | 30.0% | |
| CTCTTCAATCCATATACAAT+CGG | + | chr7_1:16225841-16225860 | None:intergenic | 30.0% | |
| CCTTAAAGTAGGAGTCTAAA+TGG | + | chr7_1:16222113-16222132 | None:intergenic | 35.0% | |
| CCATTTAGACTCCTACTTTA+AGG | - | chr7_1:16222110-16222129 | Msa1011600:CDS | 35.0% | |
| ! | AATGACTGATTTCCACTACT+GGG | - | chr7_1:16222326-16222345 | Msa1011600:CDS | 35.0% |
| CTTTGTGAACTAAAAGTGAC+AGG | - | chr7_1:16222722-16222741 | Msa1011600:intron | 35.0% | |
| AGGTAAGTGAACTAAAATGG+AGG | - | chr7_1:16222749-16222768 | Msa1011600:intron | 35.0% | |
| AAATTGGGTGGACACTATTT+GGG | - | chr7_1:16222899-16222918 | Msa1011600:intron | 35.0% | |
| ! | CATCATCAAATTTTTCCCCA+TGG | + | chr7_1:16222929-16222948 | None:intergenic | 35.0% |
| !! | TGGGGAAAAATTTGATGATG+AGG | - | chr7_1:16222929-16222948 | Msa1011600:intron | 35.0% |
| AGAAATTCTTTCAGGATGAC+TGG | + | chr7_1:16223003-16223022 | None:intergenic | 35.0% | |
| !! | AATTTCTGAAACTGTGGAAG+TGG | - | chr7_1:16223016-16223035 | Msa1011600:intron | 35.0% |
| AGCAGAGTTTACAGAAAATG+AGG | - | chr7_1:16223079-16223098 | Msa1011600:intron | 35.0% | |
| !!! | CAACAGTTTTGGAGTATAGT+TGG | - | chr7_1:16223173-16223192 | Msa1011600:intron | 35.0% |
| ! | AGATGTGACTTCTTTTGCTT+TGG | - | chr7_1:16223199-16223218 | Msa1011600:intron | 35.0% |
| TCCAAAAAAGAAAAAGCCCA+AGG | - | chr7_1:16223280-16223299 | Msa1011600:intron | 35.0% | |
| !! | ACCTTGGGCTTTTTCTTTTT+TGG | + | chr7_1:16223284-16223303 | None:intergenic | 35.0% |
| CTGATTCTTCCTGATATCAT+TGG | - | chr7_1:16223383-16223402 | Msa1011600:intron | 35.0% | |
| !! | TTTCAAAGTGCTTTTGTACC+GGG | - | chr7_1:16223410-16223429 | Msa1011600:intron | 35.0% |
| !! | ATAAAGGTGCTTCAGTCTAT+GGG | - | chr7_1:16223572-16223591 | Msa1011600:intron | 35.0% |
| !! | TCTTTCTCTGTGTTGCTTAA+TGG | - | chr7_1:16223644-16223663 | Msa1011600:intron | 35.0% |
| CTTCGGCACATAAGATAAAT+AGG | + | chr7_1:16223733-16223752 | None:intergenic | 35.0% | |
| !!! | TTATGTGCCGAAGTTTTTTC+TGG | - | chr7_1:16223740-16223759 | Msa1011600:intron | 35.0% |
| !!! | TATGTGCCGAAGTTTTTTCT+GGG | - | chr7_1:16223741-16223760 | Msa1011600:intron | 35.0% |
| TAGAAGCCCAGAAAAAACTT+CGG | + | chr7_1:16223750-16223769 | None:intergenic | 35.0% | |
| CAAGAGGAAAAAAGTCTTCA+TGG | - | chr7_1:16223779-16223798 | Msa1011600:intron | 35.0% | |
| TACGATCATCAGGTACATTT+CGG | + | chr7_1:16223979-16223998 | None:intergenic | 35.0% | |
| ! | ATTTTGTCCAAGATAAGGTG+TGG | - | chr7_1:16224101-16224120 | Msa1011600:intron | 35.0% |
| AAACAACTCATCACATACGT+AGG | + | chr7_1:16224208-16224227 | None:intergenic | 35.0% | |
| ATATGCTCGCATAAACTCAT+TGG | + | chr7_1:16224238-16224257 | None:intergenic | 35.0% | |
| AAGGTGAGCGTAAAATTCAT+TGG | - | chr7_1:16224296-16224315 | Msa1011600:intron | 35.0% | |
| TCACCTAATTCATATATGGG+AGG | - | chr7_1:16224594-16224613 | Msa1011600:intron | 35.0% | |
| TGTCCTCCCATATATGAATT+AGG | + | chr7_1:16224600-16224619 | None:intergenic | 35.0% | |
| TTCATATATGGGAGGACAAT+TGG | - | chr7_1:16224602-16224621 | Msa1011600:intron | 35.0% | |
| TTCATGACGATATTCGATGT+TGG | - | chr7_1:16224701-16224720 | Msa1011600:intron | 35.0% | |
| ! | TGAAATTTTTCTCCCCTTTG+AGG | - | chr7_1:16224741-16224760 | Msa1011600:intron | 35.0% |
| !! | AGAATTTGTTGAGCCTCAAA+GGG | + | chr7_1:16224757-16224776 | None:intergenic | 35.0% |
| !! | AAGAATTTGTTGAGCCTCAA+AGG | + | chr7_1:16224758-16224777 | None:intergenic | 35.0% |
| AATCACAAGATGAGTTTGTG+TGG | - | chr7_1:16224800-16224819 | Msa1011600:intron | 35.0% | |
| ATCACAAGATGAGTTTGTGT+GGG | - | chr7_1:16224801-16224820 | Msa1011600:intron | 35.0% | |
| GAGTGCATATCGTTTCTTAA+AGG | - | chr7_1:16224855-16224874 | Msa1011600:intron | 35.0% | |
| CATATCGTTTCTTAAAGGCA+AGG | - | chr7_1:16224860-16224879 | Msa1011600:intron | 35.0% | |
| AATGTCCTGTATTGAGCTAT+GGG | + | chr7_1:16224902-16224921 | None:intergenic | 35.0% | |
| !!! | GATCCATTGTGTGTTTTTTG+TGG | - | chr7_1:16225048-16225067 | Msa1011600:intron | 35.0% |
| GTCATTGGTCAAAGCATATA+TGG | - | chr7_1:16225109-16225128 | Msa1011600:intron | 35.0% | |
| !! | TGGCCTTGTGTTATGAAATT+TGG | - | chr7_1:16225247-16225266 | Msa1011600:intron | 35.0% |
| GCACCAAATTTCATAACACA+AGG | + | chr7_1:16225253-16225272 | None:intergenic | 35.0% | |
| TACCTATATCTGATGTTCAC+TGG | - | chr7_1:16225406-16225425 | Msa1011600:intron | 35.0% | |
| AGCTTATAGCAACCATTATC+GGG | + | chr7_1:16225438-16225457 | None:intergenic | 35.0% | |
| !! | GAGAGATTATGAAGGTATTG+TGG | - | chr7_1:16225515-16225534 | Msa1011600:intron | 35.0% |
| ! | CTTTTCATTACCAGATTCAG+AGG | - | chr7_1:16225560-16225579 | Msa1011600:intron | 35.0% |
| TAAATCAAAAGCCAAGACTG+CGG | + | chr7_1:16225880-16225899 | None:intergenic | 35.0% | |
| ! | GTTGGAGTGGTAAGAAATTT+TGG | - | chr7_1:16226221-16226240 | Msa1011600:CDS | 35.0% |
| ! | TATTGGCAATTGATGACCAA+CGG | - | chr7_1:16226418-16226437 | Msa1011600:CDS | 35.0% |
| CAAGGCTTCTTCCTTAAAGT+AGG | + | chr7_1:16222124-16222143 | None:intergenic | 40.0% | |
| ! | CTACTTTAAGGAAGAAGCCT+TGG | - | chr7_1:16222122-16222141 | Msa1011600:CDS | 40.0% |
| ! | CAATGACTGATTTCCACTAC+TGG | - | chr7_1:16222325-16222344 | Msa1011600:CDS | 40.0% |
| GGATACCCAACTATAGGAAT+AGG | - | chr7_1:16222367-16222386 | Msa1011600:intron | 40.0% | |
| TGGTATGTTTAGGTGAGTGA+TGG | - | chr7_1:16222491-16222510 | Msa1011600:intron | 40.0% | |
| GGTATGTTTAGGTGAGTGAT+GGG | - | chr7_1:16222492-16222511 | Msa1011600:intron | 40.0% | |
| !! | TTGCTGAACTTGTTGCTACT+TGG | - | chr7_1:16222528-16222547 | Msa1011600:intron | 40.0% |
| !! | CTAAGATGGAGAGCTACTTT+TGG | - | chr7_1:16222581-16222600 | Msa1011600:intron | 40.0% |
| ! | GGCTAGATTGAATGATTTGC+TGG | - | chr7_1:16222770-16222789 | Msa1011600:intron | 40.0% |
| !! | GAATGATTTGCTGGAAAGTG+AGG | - | chr7_1:16222779-16222798 | Msa1011600:intron | 40.0% |
| TGCTGGAAAGTGAGGAAATT+TGG | - | chr7_1:16222787-16222806 | Msa1011600:intron | 40.0% | |
| TGGAAAGTGAGGAAATTTGG+TGG | - | chr7_1:16222790-16222809 | Msa1011600:intron | 40.0% | |
| GGAAAGTGAGGAAATTTGGT+GGG | - | chr7_1:16222791-16222810 | Msa1011600:intron | 40.0% | |
| ! | CGAGCTTTGTGGTTAAAACA+TGG | - | chr7_1:16222825-16222844 | Msa1011600:intron | 40.0% |
| GAAATTGGGTGGACACTATT+TGG | - | chr7_1:16222898-16222917 | Msa1011600:intron | 40.0% | |
| ! | ACACTATTTGGGATGACCAT+GGG | - | chr7_1:16222910-16222929 | Msa1011600:intron | 40.0% |
| AATTCTTTCAGGATGACTGG+TGG | + | chr7_1:16223000-16223019 | None:intergenic | 40.0% | |
| GAAATAGGTCGAAAATCACC+TGG | + | chr7_1:16223308-16223327 | None:intergenic | 40.0% | |
| !! | GATAAAGGTGCTTCAGTCTA+TGG | - | chr7_1:16223571-16223590 | Msa1011600:intron | 40.0% |
| TGAGGACAAAACTTCTGACA+AGG | + | chr7_1:16223674-16223693 | None:intergenic | 40.0% | |
| GCTTCTAAATAAGGCACAAG+AGG | - | chr7_1:16223763-16223782 | Msa1011600:intron | 40.0% | |
| TCAAGATGCTCAAACCATTC+AGG | - | chr7_1:16223883-16223902 | Msa1011600:intron | 40.0% | |
| CAAGATGCTCAAACCATTCA+GGG | - | chr7_1:16223884-16223903 | Msa1011600:intron | 40.0% | |
| AGAATTAAGCACTCCCTGAA+TGG | + | chr7_1:16223900-16223919 | None:intergenic | 40.0% | |
| !! | CCTTAATTTGCATCCAACCT+TGG | + | chr7_1:16224012-16224031 | None:intergenic | 40.0% |
| CCAAGGTTGGATGCAAATTA+AGG | - | chr7_1:16224009-16224028 | Msa1011600:intron | 40.0% | |
| ! | TGAGTGTCACTCGAAGTATT+TGG | - | chr7_1:16224036-16224055 | Msa1011600:intron | 40.0% |
| ! | GAGTGTCACTCGAAGTATTT+GGG | - | chr7_1:16224037-16224056 | Msa1011600:intron | 40.0% |
| ! | AGTGTCACTCGAAGTATTTG+GGG | - | chr7_1:16224038-16224057 | Msa1011600:intron | 40.0% |
| TTAGACCTACCAACAAAAGC+TGG | + | chr7_1:16224067-16224086 | None:intergenic | 40.0% | |
| !! | GCTCTCAAGAAAGTACTTCT+AGG | + | chr7_1:16224478-16224497 | None:intergenic | 40.0% |
| ACTTTCTTGAGAGCTTCAGT+CGG | - | chr7_1:16224484-16224503 | Msa1011600:intron | 40.0% | |
| ! | AAGTATTTTGCAAGCTCGTG+TGG | - | chr7_1:16224531-16224550 | Msa1011600:intron | 40.0% |
| ! | AAAGCATGTCTTTGGAGAGT+AGG | - | chr7_1:16224565-16224584 | Msa1011600:intron | 40.0% |
| ! | AAGCATGTCTTTGGAGAGTA+GGG | - | chr7_1:16224566-16224585 | Msa1011600:intron | 40.0% |
| !! | GAATTTGTTGAGCCTCAAAG+GGG | + | chr7_1:16224756-16224775 | None:intergenic | 40.0% |
| TCACAAGATGAGTTTGTGTG+GGG | - | chr7_1:16224802-16224821 | Msa1011600:intron | 40.0% | |
| CAATGTCCTGTATTGAGCTA+TGG | + | chr7_1:16224903-16224922 | None:intergenic | 40.0% | |
| CACGCAAAATGTATGTGTCT+TGG | + | chr7_1:16224967-16224986 | None:intergenic | 40.0% | |
| ! | CAAGACACATACATTTTGCG+TGG | - | chr7_1:16224965-16224984 | Msa1011600:intron | 40.0% |
| TGCCCACAAAAAACACACAA+TGG | + | chr7_1:16225054-16225073 | None:intergenic | 40.0% | |
| !! | TATATGGTTTGCTTCCTCCT+TGG | - | chr7_1:16225125-16225144 | Msa1011600:intron | 40.0% |
| !! | ATATGGTTTGCTTCCTCCTT+GGG | - | chr7_1:16225126-16225145 | Msa1011600:intron | 40.0% |
| TGAATTGAACATCACACCCA+AGG | + | chr7_1:16225145-16225164 | None:intergenic | 40.0% | |
| ! | CTTTTCAACCACTCTTGGAA+GGG | + | chr7_1:16225186-16225205 | None:intergenic | 40.0% |
| ! | TCTTTTCAACCACTCTTGGA+AGG | + | chr7_1:16225187-16225206 | None:intergenic | 40.0% |
| TGTGACTACCACTGTACATA+AGG | - | chr7_1:16225311-16225330 | Msa1011600:intron | 40.0% | |
| TCTTTGTGCCTTATGTACAG+TGG | + | chr7_1:16225322-16225341 | None:intergenic | 40.0% | |
| !! | TAGTGCTAATACGGTGTTGT+TGG | - | chr7_1:16225359-16225378 | Msa1011600:intron | 40.0% |
| ! | GTGTTGTTGGAGACGTTAAA+TGG | - | chr7_1:16225372-16225391 | Msa1011600:intron | 40.0% |
| TTGTTGGAGACGTTAAATGG+AGG | - | chr7_1:16225375-16225394 | Msa1011600:intron | 40.0% | |
| GTCCAGTGAACATCAGATAT+AGG | + | chr7_1:16225411-16225430 | None:intergenic | 40.0% | |
| TTATAGCAACCATTATCGGG+AGG | + | chr7_1:16225435-16225454 | None:intergenic | 40.0% | |
| AAGCTAAATGTTGATGCAGC+AGG | - | chr7_1:16225453-16225472 | Msa1011600:intron | 40.0% | |
| ! | TAGCAGAAGCTTTAGCTATG+CGG | - | chr7_1:16225583-16225602 | Msa1011600:intron | 40.0% |
| GGAATCAGATGCTTCTAATG+TGG | - | chr7_1:16225653-16225672 | Msa1011600:intron | 40.0% | |
| CAACAACATCCCAACTATGT+TGG | - | chr7_1:16225696-16225715 | Msa1011600:intron | 40.0% | |
| ATTCTTGCATGTTAGACGTG+AGG | - | chr7_1:16225770-16225789 | Msa1011600:intron | 40.0% | |
| TACTCACAATTTGGTTGGAG+TGG | - | chr7_1:16226208-16226227 | Msa1011600:CDS | 40.0% | |
| ! | TGTGACAATGCGACTTTTGA+TGG | - | chr7_1:16226348-16226367 | Msa1011600:intron | 40.0% |
| ! | GTGACAATGCGACTTTTGAT+GGG | - | chr7_1:16226349-16226368 | Msa1011600:intron | 40.0% |
| CATTGACAATGTCCCAGTAG+TGG | + | chr7_1:16222341-16222360 | None:intergenic | 45.0% | |
| TGGGACATTGTCAATGCCAT+TGG | - | chr7_1:16222345-16222364 | Msa1011600:CDS | 45.0% | |
| GGGACATTGTCAATGCCATT+GGG | - | chr7_1:16222346-16222365 | Msa1011600:CDS | 45.0% | |
| CCTATAGTTGGGTATCCCAA+TGG | + | chr7_1:16222364-16222383 | None:intergenic | 45.0% | |
| CCATTGGGATACCCAACTAT+AGG | - | chr7_1:16222361-16222380 | Msa1011600:CDS | 45.0% | |
| ! | GACACTATTTGGGATGACCA+TGG | - | chr7_1:16222909-16222928 | Msa1011600:intron | 45.0% |
| ! | CACTATTTGGGATGACCATG+GGG | - | chr7_1:16222911-16222930 | Msa1011600:intron | 45.0% |
| TTAAAACCTCATGCTGCTCC+AGG | - | chr7_1:16223122-16223141 | Msa1011600:intron | 45.0% | |
| AATAAAGCAGGCATTCCGTC+AGG | + | chr7_1:16223149-16223168 | None:intergenic | 45.0% | |
| !! | GCTTTGGAGATTCTCAACCA+TGG | - | chr7_1:16223215-16223234 | Msa1011600:intron | 45.0% |
| TTGGAGATTCTCAACCATGG+TGG | - | chr7_1:16223218-16223237 | Msa1011600:intron | 45.0% | |
| TGTCACTAGGATTTCCACCA+TGG | + | chr7_1:16223235-16223254 | None:intergenic | 45.0% | |
| ! | CAAAGGTAAGAAGGGGTATG+TGG | - | chr7_1:16223496-16223515 | Msa1011600:intron | 45.0% |
| AGGCATATGATCGTATCGAG+TGG | - | chr7_1:16223540-16223559 | Msa1011600:intron | 45.0% | |
| CAACACAGAGAAAGATACCG+TGG | + | chr7_1:16223639-16223658 | None:intergenic | 45.0% | |
| GCTTCTTCCACACCTTATCT+TGG | + | chr7_1:16224111-16224130 | None:intergenic | 45.0% | |
| AAGGTGTGGAAGAAGCTGAA+AGG | - | chr7_1:16224115-16224134 | Msa1011600:intron | 45.0% | |
| TGTGGAAGAAGCTGAAAGGT+TGG | - | chr7_1:16224119-16224138 | Msa1011600:intron | 45.0% | |
| ! | TGTCTTTGGAGAGTAGGGAA+TGG | - | chr7_1:16224571-16224590 | Msa1011600:intron | 45.0% |
| TGTCTCCCATAGCTCAATAC+AGG | - | chr7_1:16224894-16224913 | Msa1011600:intron | 45.0% | |
| AGGACATTGACCAGCAAGTT+TGG | - | chr7_1:16224914-16224933 | Msa1011600:intron | 45.0% | |
| ! | GACACATACATTTTGCGTGG+AGG | - | chr7_1:16224968-16224987 | Msa1011600:intron | 45.0% |
| ATTGAACATCACACCCAAGG+AGG | + | chr7_1:16225142-16225161 | None:intergenic | 45.0% | |
| TCCAATAGAGGGAGGTAAGT+GGG | - | chr7_1:16225476-16225495 | Msa1011600:intron | 45.0% | |
| ! | AGAAGCTTTAGCTATGCGGA+AGG | - | chr7_1:16225587-16225606 | Msa1011600:intron | 45.0% |
| ! | GAAGCTTTAGCTATGCGGAA+GGG | - | chr7_1:16225588-16225607 | Msa1011600:intron | 45.0% |
| TTTAGCTATGCGGAAGGGTT+TGG | - | chr7_1:16225593-16225612 | Msa1011600:intron | 45.0% | |
| GAGCTAGATAATGAGCAGCT+TGG | + | chr7_1:16225800-16225819 | None:intergenic | 45.0% | |
| AAGACTGCGGAAATTCAAGG+CGG | + | chr7_1:16225867-16225886 | None:intergenic | 45.0% | |
| ATTCCTTCACAGCGACAACT+CGG | - | chr7_1:16226145-16226164 | Msa1011600:intron | 45.0% | |
| CAACTCGGCATTATGTGTAG+TGG | - | chr7_1:16226160-16226179 | Msa1011600:CDS | 45.0% | |
| GATCATTGTTGCACTCGTTG+TGG | + | chr7_1:16226378-16226397 | None:intergenic | 45.0% | |
| ATGATCTCATCCGCAAAGCA+AGG | - | chr7_1:16226392-16226411 | Msa1011600:CDS | 45.0% | |
| TGATCTCATCCGCAAAGCAA+GGG | - | chr7_1:16226393-16226412 | Msa1011600:CDS | 45.0% | |
| !!! | AAAAATAAATGATTAATTTT+TGG | + | chr7_1:16223827-16223846 | None:intergenic | 5.0% |
| GGCTGCTGCACTATCCAAAT+TGG | - | chr7_1:16222266-16222285 | Msa1011600:intron | 50.0% | |
| ! | AAGAAAAAGCCCAAGGTGCC+AGG | - | chr7_1:16223287-16223306 | Msa1011600:intron | 50.0% |
| CGAAAATCACCTGGCACCTT+GGG | + | chr7_1:16223299-16223318 | None:intergenic | 50.0% | |
| TCGAAAATCACCTGGCACCT+TGG | + | chr7_1:16223300-16223319 | None:intergenic | 50.0% | |
| GGGGTATGTGGCACTAAAGT+TGG | - | chr7_1:16223508-16223527 | Msa1011600:intron | 50.0% | |
| !! | CAGAAGTTTTGTCCTCAGCG+CGG | - | chr7_1:16223677-16223696 | Msa1011600:intron | 50.0% |
| GAGACAAAGGATCCCCTTGA+CGG | + | chr7_1:16223706-16223725 | None:intergenic | 50.0% | |
| ! | TTGGGGCTACCAGCTTTTGT+TGG | - | chr7_1:16224055-16224074 | Msa1011600:intron | 50.0% |
| ! | GGCTACCAGCTTTTGTTGGT+AGG | - | chr7_1:16224059-16224078 | Msa1011600:intron | 50.0% |
| ! | TTTTGGTGGGGCAGCAAACA+AGG | - | chr7_1:16224277-16224296 | Msa1011600:intron | 50.0% |
| TGATGCAGCAGGTCCAATAG+AGG | - | chr7_1:16225464-16225483 | Msa1011600:intron | 50.0% | |
| GATGCAGCAGGTCCAATAGA+GGG | - | chr7_1:16225465-16225484 | Msa1011600:intron | 50.0% | |
| GTCCAATAGAGGGAGGTAAG+TGG | - | chr7_1:16225475-16225494 | Msa1011600:intron | 50.0% | |
| CCAATAGAGGGAGGTAAGTG+GGG | - | chr7_1:16225477-16225496 | Msa1011600:intron | 50.0% | |
| GCTTCTGCTACCTCTGAATC+TGG | + | chr7_1:16225573-16225592 | None:intergenic | 50.0% | |
| GCCTTGAATTTCCGCAGTCT+TGG | - | chr7_1:16225866-16225885 | Msa1011600:intron | 50.0% | |
| GCCAAGACTGCGGAAATTCA+AGG | + | chr7_1:16225870-16225889 | None:intergenic | 50.0% | |
| ! | CGGCATTATGTGTAGTGGAG+TGG | - | chr7_1:16226165-16226184 | Msa1011600:CDS | 50.0% |
| ! | TCCGCAAAGCAAGGGAGTAT+TGG | - | chr7_1:16226401-16226420 | Msa1011600:CDS | 50.0% |
| GCCAATACTCCCTTGCTTTG+CGG | + | chr7_1:16226405-16226424 | None:intergenic | 50.0% | |
| ! | AGGAAATTTGGTGGGCCCAG+AGG | - | chr7_1:16222799-16222818 | Msa1011600:intron | 55.0% |
| CCACAAAGCTCGAGACCTCT+GGG | + | chr7_1:16222817-16222836 | None:intergenic | 55.0% | |
| ACCACAAAGCTCGAGACCTC+TGG | + | chr7_1:16222818-16222837 | None:intergenic | 55.0% | |
| GGTACATGCCCTTCCAAGAG+TGG | - | chr7_1:16225175-16225194 | Msa1011600:intron | 55.0% | |
| CACTGGACACCTCCCGATAA+TGG | - | chr7_1:16225423-16225442 | Msa1011600:intron | 55.0% | |
| CCCCACTTACCTCCCTCTAT+TGG | + | chr7_1:16225480-16225499 | None:intergenic | 55.0% | |
| GAGGGAGGTAAGTGGGGTAT+TGG | - | chr7_1:16225483-16225502 | Msa1011600:intron | 55.0% | |
| ATGCCGAGTTGTCGCTGTGA+AGG | + | chr7_1:16226151-16226170 | None:intergenic | 55.0% | |
| CCCAGAGGTCTCGAGCTTTG+TGG | - | chr7_1:16222814-16222833 | Msa1011600:intron | 60.0% | |
| TCAGGACCTGGAGCAGCATG+AGG | + | chr7_1:16223131-16223150 | None:intergenic | 60.0% | |
| CATGCTGCTCCAGGTCCTGA+CGG | - | chr7_1:16223131-16223150 | Msa1011600:intron | 60.0% | |
| GCAGCAGGTCCAATAGAGGG+AGG | - | chr7_1:16225468-16225487 | Msa1011600:intron | 60.0% | |
| GCAGGCATTCCGTCAGGACC+TGG | + | chr7_1:16223143-16223162 | None:intergenic | 65.0% | |
| CTCAGCGCGGTCTCCGTCAA+GGG | - | chr7_1:16223690-16223709 | Msa1011600:intron | 65.0% | |
| TCAGCGCGGTCTCCGTCAAG+GGG | - | chr7_1:16223691-16223710 | Msa1011600:intron | 65.0% | |
| CCTTGACGGAGACCGCGCTG+AGG | + | chr7_1:16223692-16223711 | None:intergenic | 70.0% | |
| CCTCAGCGCGGTCTCCGTCA+AGG | - | chr7_1:16223689-16223708 | Msa1011600:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 16222090 | 16226450 | 16222090 | ID=Msa1011600;Name=Msa1011600 |
| chr7_1 | mRNA | 16222090 | 16226450 | 16222090 | ID=Msa1011600-mRNA-1;Parent=Msa1011600;Name=Msa1011600-mRNA-1;_AED=0.42;_eAED=0.46;_QI=0|0|0|1|0.66|0.75|4|0|135 |
| chr7_1 | exon | 16226367 | 16226450 | 16226367 | ID=Msa1011600-mRNA-1:exon:4161;Parent=Msa1011600-mRNA-1 |
| chr7_1 | exon | 16226152 | 16226273 | 16226152 | ID=Msa1011600-mRNA-1:exon:4160;Parent=Msa1011600-mRNA-1 |
| chr7_1 | exon | 16222311 | 16222383 | 16222311 | ID=Msa1011600-mRNA-1:exon:4159;Parent=Msa1011600-mRNA-1 |
| chr7_1 | exon | 16222090 | 16222218 | 16222090 | ID=Msa1011600-mRNA-1:exon:4158;Parent=Msa1011600-mRNA-1 |
| chr7_1 | CDS | 16226367 | 16226450 | 16226367 | ID=Msa1011600-mRNA-1:cds;Parent=Msa1011600-mRNA-1 |
| chr7_1 | CDS | 16226152 | 16226273 | 16226152 | ID=Msa1011600-mRNA-1:cds;Parent=Msa1011600-mRNA-1 |
| chr7_1 | CDS | 16222311 | 16222383 | 16222311 | ID=Msa1011600-mRNA-1:cds;Parent=Msa1011600-mRNA-1 |
| chr7_1 | CDS | 16222090 | 16222218 | 16222090 | ID=Msa1011600-mRNA-1:cds;Parent=Msa1011600-mRNA-1 |
| Gene Sequence |
| Protein sequence |
