Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011960 | GAU33112.1 | 82.708 | 613 | 105 | 1 | 1 | 613 | 9 | 620 | 0.0 | 1050 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011960 | sp|Q9LHA8|HS704_ARATH | 67.541 | 610 | 194 | 3 | 1 | 608 | 1 | 608 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011960 | A0A2Z6N8I6 | 82.708 | 613 | 105 | 1 | 1 | 613 | 9 | 620 | 0.0 | 1050 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0721280 | Msa1011960 | 0.802203 | 6.272613e-49 | -8.615850e-47 |
| Msa1011960 | Msa1012000 | 0.987726 | 2.600744e-171 | -8.615850e-47 |
| Msa1011960 | Msa1398090 | 0.802014 | 6.859083e-49 | -8.615850e-47 |
| Msa0962840 | Msa1011960 | 0.812238 | 4.687260e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011960 | MtrunA17_Chr7g0223621 | 80.291 | 619 | 121 | 1 | 1 | 619 | 1 | 618 | 0.0 | 1032 |
| Msa1011960 | MtrunA17_Chr7g0223711 | 78.514 | 619 | 133 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1008 |
| Msa1011960 | MtrunA17_Chr8g0350731 | 79.445 | 613 | 125 | 1 | 1 | 613 | 29 | 640 | 0.0 | 998 |
| Msa1011960 | MtrunA17_Chr7g0223751 | 74.878 | 613 | 153 | 1 | 1 | 613 | 1 | 612 | 0.0 | 951 |
| Msa1011960 | MtrunA17_Chr7g0223701 | 74.074 | 621 | 151 | 4 | 1 | 612 | 1 | 620 | 0.0 | 932 |
| Msa1011960 | MtrunA17_Chr7g0223631 | 73.183 | 619 | 151 | 3 | 1 | 619 | 1 | 604 | 0.0 | 908 |
| Msa1011960 | MtrunA17_Chr7g0223741 | 73.401 | 594 | 158 | 0 | 1 | 594 | 1 | 594 | 0.0 | 907 |
| Msa1011960 | MtrunA17_Chr7g0223731 | 71.615 | 613 | 173 | 1 | 1 | 613 | 1 | 612 | 0.0 | 897 |
| Msa1011960 | MtrunA17_Chr7g0223031 | 70.636 | 613 | 179 | 1 | 1 | 613 | 1 | 612 | 0.0 | 892 |
| Msa1011960 | MtrunA17_Chr7g0248131 | 70.388 | 618 | 177 | 5 | 1 | 613 | 1 | 617 | 0.0 | 877 |
| Msa1011960 | MtrunA17_Chr7g0248151 | 68.669 | 616 | 189 | 3 | 1 | 613 | 1 | 615 | 0.0 | 848 |
| Msa1011960 | MtrunA17_Chr2g0293581 | 66.613 | 617 | 203 | 3 | 1 | 614 | 1 | 617 | 0.0 | 841 |
| Msa1011960 | MtrunA17_Chr7g0223781 | 67.427 | 614 | 196 | 3 | 1 | 613 | 1 | 611 | 0.0 | 840 |
| Msa1011960 | MtrunA17_Chr7g0223801 | 66.775 | 614 | 202 | 2 | 1 | 614 | 1 | 612 | 0.0 | 836 |
| Msa1011960 | MtrunA17_Chr7g0221661 | 66.343 | 618 | 206 | 2 | 1 | 617 | 1 | 617 | 0.0 | 827 |
| Msa1011960 | MtrunA17_Chr7g0223181 | 66.721 | 610 | 199 | 3 | 1 | 608 | 1 | 608 | 0.0 | 826 |
| Msa1011960 | MtrunA17_Chr5g0427901 | 65.120 | 625 | 205 | 3 | 1 | 613 | 1 | 624 | 0.0 | 826 |
| Msa1011960 | MtrunA17_Chr7g0223721 | 66.016 | 615 | 206 | 3 | 1 | 613 | 1 | 614 | 0.0 | 825 |
| Msa1011960 | MtrunA17_Chr4g0031321 | 66.557 | 610 | 200 | 3 | 1 | 608 | 1 | 608 | 0.0 | 824 |
| Msa1011960 | MtrunA17_Chr7g0223541 | 73.704 | 540 | 142 | 0 | 74 | 613 | 31 | 570 | 0.0 | 823 |
| Msa1011960 | MtrunA17_Chr4g0031301 | 66.393 | 610 | 201 | 3 | 1 | 608 | 1 | 608 | 0.0 | 822 |
| Msa1011960 | MtrunA17_Chr7g0262821 | 66.066 | 610 | 203 | 3 | 1 | 608 | 1 | 608 | 0.0 | 821 |
| Msa1011960 | MtrunA17_Chr7g0223291 | 66.230 | 610 | 202 | 3 | 1 | 608 | 1 | 608 | 0.0 | 820 |
| Msa1011960 | MtrunA17_Chr2g0298851 | 65.630 | 611 | 205 | 5 | 1 | 608 | 1 | 609 | 0.0 | 816 |
| Msa1011960 | MtrunA17_Chr2g0298861 | 64.952 | 622 | 203 | 5 | 1 | 608 | 1 | 621 | 0.0 | 814 |
| Msa1011960 | MtrunA17_Chr4g0040931 | 64.426 | 610 | 214 | 3 | 1 | 608 | 1 | 609 | 0.0 | 803 |
| Msa1011960 | MtrunA17_Chr2g0287631 | 65.422 | 616 | 211 | 2 | 1 | 614 | 1 | 616 | 0.0 | 802 |
| Msa1011960 | MtrunA17_Chr7g0233311 | 63.799 | 616 | 221 | 2 | 1 | 614 | 1 | 616 | 0.0 | 801 |
| Msa1011960 | MtrunA17_Chr4g0073741 | 64.754 | 610 | 210 | 4 | 1 | 608 | 1 | 607 | 0.0 | 801 |
| Msa1011960 | MtrunA17_Chr7g0223851 | 62.742 | 620 | 228 | 3 | 1 | 618 | 10 | 628 | 0.0 | 794 |
| Msa1011960 | MtrunA17_Chr7g0225671 | 62.908 | 612 | 223 | 4 | 9 | 618 | 16 | 625 | 0.0 | 785 |
| Msa1011960 | MtrunA17_Chr7g0223681 | 74.379 | 523 | 133 | 1 | 91 | 613 | 2 | 523 | 0.0 | 781 |
| Msa1011960 | MtrunA17_Chr7g0217971 | 63.545 | 598 | 193 | 2 | 1 | 598 | 1 | 573 | 0.0 | 771 |
| Msa1011960 | MtrunA17_Chr2g0296391 | 67.547 | 530 | 171 | 1 | 1 | 529 | 1 | 530 | 0.0 | 751 |
| Msa1011960 | MtrunA17_Chr7g0223821 | 60.586 | 614 | 234 | 4 | 1 | 608 | 1 | 612 | 0.0 | 737 |
| Msa1011960 | MtrunA17_Chr4g0012541 | 59.516 | 620 | 239 | 4 | 1 | 618 | 1 | 610 | 0.0 | 737 |
| Msa1011960 | MtrunA17_Chr8g0390821 | 57.421 | 667 | 214 | 8 | 1 | 613 | 1 | 651 | 0.0 | 733 |
| Msa1011960 | MtrunA17_Chr7g0233301 | 59.253 | 616 | 218 | 3 | 1 | 614 | 1 | 585 | 0.0 | 729 |
| Msa1011960 | MtrunA17_Chr7g0223831 | 59.380 | 613 | 216 | 6 | 1 | 610 | 1 | 583 | 0.0 | 706 |
| Msa1011960 | MtrunA17_Chr2g0293601 | 66.409 | 518 | 139 | 2 | 1 | 517 | 1 | 484 | 0.0 | 697 |
| Msa1011960 | MtrunA17_Chr7g0228281 | 57.258 | 620 | 217 | 6 | 1 | 618 | 62 | 635 | 0.0 | 697 |
| Msa1011960 | MtrunA17_Chr6g0462601 | 59.083 | 589 | 238 | 2 | 1 | 588 | 1 | 587 | 0.0 | 696 |
| Msa1011960 | MtrunA17_Chr7g0215261 | 57.980 | 614 | 218 | 6 | 1 | 610 | 1 | 578 | 0.0 | 694 |
| Msa1011960 | MtrunA17_Chr6g0462681 | 56.866 | 619 | 264 | 2 | 1 | 618 | 1 | 617 | 0.0 | 689 |
| Msa1011960 | MtrunA17_Chr6g0462711 | 57.956 | 597 | 244 | 3 | 8 | 598 | 9 | 604 | 0.0 | 674 |
| Msa1011960 | MtrunA17_Chr2g0331381 | 60.595 | 538 | 150 | 4 | 10 | 547 | 7 | 482 | 0.0 | 652 |
| Msa1011960 | MtrunA17_Chr6g0462771 | 57.877 | 584 | 235 | 4 | 8 | 582 | 8 | 589 | 0.0 | 649 |
| Msa1011960 | MtrunA17_Chr6g0462641 | 56.514 | 591 | 246 | 4 | 1 | 582 | 1 | 589 | 0.0 | 648 |
| Msa1011960 | MtrunA17_Chr2g0284681 | 57.321 | 560 | 229 | 5 | 9 | 560 | 8 | 565 | 0.0 | 640 |
| Msa1011960 | MtrunA17_Chr8g0388761 | 52.730 | 586 | 267 | 7 | 7 | 588 | 36 | 615 | 0.0 | 612 |
| Msa1011960 | MtrunA17_Chr8g0388671 | 52.901 | 586 | 266 | 7 | 7 | 588 | 36 | 615 | 0.0 | 610 |
| Msa1011960 | MtrunA17_Chr2g0293561 | 73.797 | 374 | 98 | 0 | 1 | 374 | 1 | 374 | 0.0 | 593 |
| Msa1011960 | MtrunA17_Chr1g0166551 | 51.736 | 605 | 178 | 5 | 9 | 611 | 5 | 497 | 0.0 | 584 |
| Msa1011960 | MtrunA17_Chr6g0462611 | 54.862 | 545 | 245 | 1 | 74 | 618 | 22 | 565 | 0.0 | 578 |
| Msa1011960 | MtrunA17_Chr2g0299791 | 68.895 | 389 | 117 | 2 | 1 | 389 | 1034 | 1418 | 0.0 | 550 |
| Msa1011960 | MtrunA17_Chr2g0299821 | 59.292 | 452 | 167 | 4 | 1 | 437 | 1 | 450 | 0.0 | 528 |
| Msa1011960 | MtrunA17_Chr2g0299821 | 48.454 | 97 | 40 | 3 | 451 | 539 | 390 | 484 | 8.24e-18 | 86.7 |
| Msa1011960 | MtrunA17_Chr2g0299921 | 67.342 | 395 | 125 | 2 | 2 | 396 | 1022 | 1412 | 1.33e-177 | 549 |
| Msa1011960 | MtrunA17_Chr2g0299921 | 66.667 | 390 | 125 | 3 | 2 | 390 | 1406 | 1791 | 2.70e-165 | 516 |
| Msa1011960 | MtrunA17_Chr2g0299851 | 66.667 | 390 | 126 | 2 | 1 | 390 | 1030 | 1415 | 1.60e-177 | 541 |
| Msa1011960 | MtrunA17_Chr2g0293271 | 57.666 | 437 | 115 | 3 | 21 | 457 | 43 | 409 | 6.95e-169 | 487 |
| Msa1011960 | MtrunA17_Chr2g0299881 | 67.188 | 384 | 118 | 3 | 10 | 389 | 1039 | 1418 | 3.07e-168 | 518 |
| Msa1011960 | MtrunA17_Chr2g0299881 | 62.687 | 67 | 25 | 0 | 184 | 250 | 1409 | 1475 | 1.98e-18 | 90.1 |
| Msa1011960 | MtrunA17_Chr6g0462861 | 46.907 | 582 | 278 | 8 | 9 | 580 | 9 | 569 | 2.86e-167 | 492 |
| Msa1011960 | MtrunA17_Chr2g0279901 | 44.891 | 597 | 304 | 12 | 10 | 600 | 57 | 634 | 6.39e-163 | 481 |
| Msa1011960 | MtrunA17_Chr4g0049501 | 43.719 | 597 | 312 | 11 | 10 | 600 | 54 | 632 | 3.80e-160 | 474 |
| Msa1011960 | MtrunA17_Chr2g0277021 | 44.670 | 591 | 294 | 12 | 10 | 589 | 72 | 640 | 1.65e-152 | 456 |
| Msa1011960 | MtrunA17_Chr1g0151991 | 69.416 | 291 | 89 | 0 | 1 | 291 | 1 | 291 | 5.01e-149 | 432 |
| Msa1011960 | MtrunA17_Chr7g0245521 | 72.894 | 273 | 74 | 0 | 1 | 273 | 1 | 273 | 2.73e-146 | 424 |
| Msa1011960 | MtrunA17_Chr7g0223761 | 52.419 | 372 | 133 | 4 | 241 | 610 | 3 | 332 | 2.22e-121 | 363 |
| Msa1011960 | MtrunA17_Chr7g0245531 | 59.164 | 311 | 125 | 2 | 305 | 614 | 2 | 311 | 1.42e-119 | 357 |
| Msa1011960 | MtrunA17_Chr7g0223671 | 86.170 | 188 | 26 | 0 | 74 | 261 | 8 | 195 | 3.57e-119 | 352 |
| Msa1011960 | MtrunA17_Chr1g0152001 | 56.566 | 297 | 126 | 3 | 315 | 610 | 1 | 295 | 5.64e-107 | 325 |
| Msa1011960 | MtrunA17_Chr1g0188601 | 75.393 | 191 | 47 | 0 | 92 | 282 | 1 | 191 | 4.45e-100 | 303 |
| Msa1011960 | MtrunA17_Chr6g0462631 | 49.850 | 333 | 118 | 5 | 88 | 416 | 10 | 297 | 4.50e-97 | 299 |
| Msa1011960 | MtrunA17_Chr6g0462751 | 46.839 | 348 | 125 | 4 | 67 | 411 | 12 | 302 | 5.70e-93 | 289 |
| Msa1011960 | MtrunA17_Chr1g0188611 | 54.422 | 294 | 126 | 2 | 322 | 614 | 1 | 287 | 9.93e-88 | 274 |
| Msa1011960 | MtrunA17_Chr5g0394391 | 34.394 | 503 | 305 | 11 | 8 | 494 | 28 | 521 | 3.07e-82 | 269 |
| Msa1011960 | MtrunA17_Chr7g0223771 | 72.549 | 153 | 42 | 0 | 93 | 245 | 1 | 153 | 1.15e-75 | 238 |
| Msa1011960 | MtrunA17_Chr2g0331901 | 33.696 | 460 | 276 | 9 | 10 | 451 | 4 | 452 | 3.05e-75 | 257 |
| Msa1011960 | MtrunA17_Chr4g0004331 | 34.240 | 441 | 271 | 7 | 10 | 436 | 4 | 439 | 5.75e-73 | 251 |
| Msa1011960 | MtrunA17_Chr6g0462791 | 62.921 | 178 | 65 | 1 | 109 | 286 | 2 | 178 | 5.20e-72 | 229 |
| Msa1011960 | MtrunA17_Chr4g0046881 | 72.603 | 146 | 37 | 1 | 130 | 275 | 9 | 151 | 3.50e-69 | 221 |
| Msa1011960 | MtrunA17_Chr5g0444001 | 31.633 | 490 | 291 | 10 | 10 | 486 | 4 | 462 | 1.16e-68 | 233 |
| Msa1011960 | MtrunA17_Chr3g0098761 | 27.560 | 664 | 401 | 15 | 10 | 608 | 4 | 652 | 5.89e-67 | 233 |
| Msa1011960 | MtrunA17_Chr3g0120101 | 29.828 | 523 | 320 | 14 | 10 | 494 | 27 | 540 | 4.01e-60 | 215 |
| Msa1011960 | MtrunA17_Chr7g0223861 | 70.229 | 131 | 39 | 0 | 78 | 208 | 4 | 134 | 7.83e-59 | 193 |
| Msa1011960 | MtrunA17_Chr4g0064621 | 32.164 | 513 | 316 | 14 | 8 | 496 | 139 | 643 | 4.17e-58 | 207 |
| Msa1011960 | MtrunA17_Chr6g0462701 | 50.820 | 183 | 66 | 1 | 88 | 270 | 10 | 168 | 2.96e-52 | 177 |
| Msa1011960 | MtrunA17_Chr5g0394221 | 40.068 | 292 | 165 | 6 | 291 | 580 | 61 | 344 | 7.64e-50 | 177 |
| Msa1011960 | MtrunA17_Chr4g0060241 | 28.711 | 512 | 318 | 17 | 8 | 496 | 19 | 506 | 1.12e-49 | 181 |
| Msa1011960 | MtrunA17_Chr5g0442171 | 34.639 | 332 | 190 | 9 | 170 | 487 | 1 | 319 | 5.91e-48 | 171 |
| Msa1011960 | MtrunA17_Chr7g0245541 | 47.692 | 195 | 100 | 2 | 417 | 610 | 1 | 194 | 6.39e-48 | 166 |
| Msa1011960 | MtrunA17_Chr5g0394231 | 39.648 | 227 | 86 | 4 | 74 | 299 | 5 | 181 | 2.10e-46 | 162 |
| Msa1011960 | MtrunA17_Chr6g0481391 | 63.934 | 122 | 41 | 1 | 38 | 159 | 13 | 131 | 8.99e-46 | 158 |
| Msa1011960 | MtrunA17_Chr4g0046871 | 72.549 | 102 | 28 | 0 | 336 | 437 | 6 | 107 | 1.82e-45 | 156 |
| Msa1011960 | MtrunA17_Chr6g0462691 | 53.521 | 142 | 65 | 1 | 322 | 462 | 1 | 142 | 1.03e-41 | 148 |
| Msa1011960 | MtrunA17_Chr7g0223691 | 86.301 | 73 | 10 | 0 | 1 | 73 | 1 | 73 | 1.62e-39 | 139 |
| Msa1011960 | MtrunA17_Chr1g0188591 | 72.603 | 73 | 20 | 0 | 1 | 73 | 1 | 73 | 1.70e-30 | 114 |
| Msa1011960 | MtrunA17_Chr6g0481381 | 71.622 | 74 | 21 | 0 | 176 | 249 | 1 | 74 | 7.62e-30 | 116 |
| Msa1011960 | MtrunA17_Chr6g0481381 | 37.895 | 95 | 58 | 1 | 515 | 608 | 75 | 169 | 6.04e-11 | 62.0 |
| Msa1011960 | MtrunA17_Chr6g0462621 | 72.603 | 73 | 18 | 1 | 1 | 73 | 1 | 71 | 1.01e-28 | 109 |
| Msa1011960 | MtrunA17_Chr7g0223791 | 70.370 | 81 | 16 | 3 | 56 | 136 | 18 | 90 | 2.92e-27 | 108 |
| Msa1011960 | MtrunA17_Chr7g0223791 | 41.758 | 91 | 53 | 0 | 483 | 573 | 91 | 181 | 1.10e-16 | 78.6 |
| Msa1011960 | MtrunA17_Chr7g0223661 | 46.552 | 116 | 19 | 1 | 315 | 430 | 1 | 73 | 3.69e-25 | 99.4 |
| Msa1011960 | MtrunA17_Chr7g0221651 | 50.000 | 84 | 42 | 0 | 215 | 298 | 1 | 84 | 9.95e-24 | 95.5 |
| Msa1011960 | MtrunA17_Chr7g0223881 | 54.878 | 82 | 36 | 1 | 281 | 362 | 2 | 82 | 1.75e-22 | 92.0 |
| Msa1011960 | MtrunA17_Chr7g0223871 | 41.085 | 129 | 75 | 1 | 491 | 618 | 7 | 135 | 2.35e-19 | 84.7 |
| Msa1011960 | MtrunA17_Chr2g0284661 | 55.422 | 83 | 36 | 1 | 368 | 449 | 61 | 143 | 3.71e-17 | 78.6 |
| Msa1011960 | MtrunA17_Chr2g0284661 | 49.180 | 61 | 29 | 1 | 225 | 283 | 5 | 65 | 3.61e-11 | 61.6 |
| Msa1011960 | MtrunA17_Chr6g0462801 | 60.606 | 66 | 21 | 1 | 322 | 382 | 1 | 66 | 2.35e-16 | 74.3 |
| Msa1011960 | MtrunA17_Chr2g0299891 | 76.744 | 43 | 10 | 0 | 315 | 357 | 1 | 43 | 2.45e-16 | 73.9 |
| Msa1011960 | MtrunA17_Chr4g0064651 | 38.947 | 95 | 55 | 2 | 397 | 490 | 29 | 121 | 7.24e-14 | 68.6 |
| Msa1011960 | MtrunA17_Chr2g0299941 | 54.688 | 64 | 27 | 1 | 390 | 453 | 16 | 77 | 1.58e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1011960 | AT3G12580.1 | 67.541 | 610 | 194 | 3 | 1 | 608 | 1 | 608 | 0.0 | 833 |
| Msa1011960 | AT5G02500.1 | 66.393 | 610 | 201 | 3 | 1 | 608 | 1 | 608 | 0.0 | 826 |
| Msa1011960 | AT5G02490.1 | 65.082 | 610 | 209 | 3 | 1 | 608 | 1 | 608 | 0.0 | 811 |
| Msa1011960 | AT3G09440.1 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1011960 | AT3G09440.4 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1011960 | AT3G09440.2 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1011960 | AT3G09440.3 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1011960 | AT1G56410.1 | 64.065 | 615 | 215 | 4 | 1 | 613 | 1 | 611 | 0.0 | 794 |
| Msa1011960 | AT1G16030.1 | 63.561 | 601 | 215 | 3 | 10 | 608 | 9 | 607 | 0.0 | 786 |
| Msa1011960 | AT5G28540.1 | 53.135 | 606 | 274 | 7 | 7 | 608 | 35 | 634 | 0.0 | 627 |
| Msa1011960 | AT5G42020.1 | 53.135 | 606 | 274 | 7 | 7 | 608 | 35 | 634 | 0.0 | 626 |
| Msa1011960 | AT5G42020.3 | 53.135 | 606 | 274 | 7 | 7 | 608 | 40 | 639 | 0.0 | 626 |
| Msa1011960 | AT5G02500.2 | 74.036 | 389 | 99 | 1 | 1 | 389 | 1 | 387 | 0.0 | 605 |
| Msa1011960 | AT5G02500.2 | 43.011 | 93 | 53 | 0 | 516 | 608 | 386 | 478 | 2.30e-14 | 76.6 |
| Msa1011960 | AT1G09080.2 | 52.295 | 610 | 282 | 6 | 7 | 613 | 40 | 643 | 0.0 | 605 |
| Msa1011960 | AT1G09080.1 | 52.295 | 610 | 282 | 6 | 7 | 613 | 50 | 653 | 0.0 | 604 |
| Msa1011960 | AT5G42020.2 | 56.133 | 481 | 202 | 6 | 7 | 484 | 35 | 509 | 0.0 | 530 |
| Msa1011960 | AT5G09590.1 | 46.043 | 556 | 278 | 9 | 10 | 559 | 60 | 599 | 1.83e-157 | 468 |
| Msa1011960 | AT4G37910.1 | 44.389 | 597 | 308 | 11 | 10 | 600 | 55 | 633 | 1.80e-155 | 463 |
| Msa1011960 | AT4G37910.2 | 44.389 | 597 | 308 | 11 | 10 | 600 | 55 | 633 | 1.80e-155 | 463 |
| Msa1011960 | AT5G49910.1 | 43.087 | 622 | 320 | 13 | 10 | 619 | 81 | 680 | 1.98e-153 | 459 |
| Msa1011960 | AT4G24280.1 | 43.186 | 609 | 322 | 12 | 10 | 611 | 81 | 672 | 1.15e-152 | 457 |
| Msa1011960 | AT1G11660.4 | 28.723 | 658 | 394 | 13 | 10 | 608 | 4 | 645 | 6.18e-78 | 263 |
| Msa1011960 | AT1G11660.3 | 28.723 | 658 | 394 | 13 | 10 | 608 | 4 | 645 | 6.18e-78 | 263 |
| Msa1011960 | AT1G11660.1 | 28.723 | 658 | 394 | 13 | 10 | 608 | 4 | 645 | 6.18e-78 | 263 |
| Msa1011960 | AT1G79930.2 | 31.138 | 501 | 323 | 8 | 10 | 496 | 4 | 496 | 1.24e-74 | 254 |
| Msa1011960 | AT1G79920.1 | 31.275 | 502 | 321 | 9 | 10 | 496 | 4 | 496 | 2.47e-74 | 253 |
| Msa1011960 | AT1G79920.3 | 32.892 | 453 | 283 | 7 | 10 | 448 | 4 | 449 | 2.85e-74 | 252 |
| Msa1011960 | AT1G79920.2 | 32.892 | 453 | 283 | 7 | 10 | 448 | 4 | 449 | 2.85e-74 | 252 |
| Msa1011960 | AT1G79920.4 | 32.892 | 453 | 283 | 7 | 10 | 448 | 4 | 449 | 2.85e-74 | 252 |
| Msa1011960 | AT1G79930.1 | 32.743 | 452 | 285 | 6 | 10 | 448 | 4 | 449 | 3.44e-74 | 254 |
| Msa1011960 | AT1G11660.2 | 29.147 | 621 | 367 | 12 | 47 | 608 | 2 | 608 | 5.19e-72 | 246 |
| Msa1011960 | AT2G32120.1 | 31.054 | 541 | 337 | 13 | 8 | 532 | 29 | 549 | 1.30e-69 | 236 |
| Msa1011960 | AT2G32120.2 | 31.054 | 541 | 337 | 13 | 8 | 532 | 29 | 549 | 1.30e-69 | 236 |
| Msa1011960 | AT4G16660.1 | 27.639 | 521 | 333 | 12 | 10 | 494 | 27 | 539 | 3.90e-57 | 207 |
| Msa1011960 | AT4G16660.2 | 28.215 | 521 | 330 | 13 | 10 | 494 | 51 | 563 | 6.94e-57 | 207 |
Find 110 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGGTTTAGAAATAAA+TGG | 0.223614 | 7_1:-16916896 | Msa1011960:CDS |
| CCAATGCAGTGTCGATATTA+AGG | 0.237028 | 7_1:-16916792 | Msa1011960:CDS |
| TTTGAAGTCAAGGCCACTTC+TGG | 0.262714 | 7_1:-16917442 | Msa1011960:CDS |
| TCCCCGGCAATGACCTTAAA+AGG | 0.263097 | 7_1:+16917829 | None:intergenic |
| TGCTTGTGGAGCAGCTATTC+AGG | 0.282392 | 7_1:-16916984 | Msa1011960:CDS |
| TGCAGTAGCTGCTTCACTTT+GGG | 0.288059 | 7_1:+16917061 | None:intergenic |
| TTTCAATCTCCTTAGGGCTT+TGG | 0.301647 | 7_1:+16917321 | None:intergenic |
| AGCAATATCACCCGCATCTT+TGG | 0.303757 | 7_1:+16917624 | None:intergenic |
| GACAGTGTTTGTTGGGTTAG+AGG | 0.330273 | 7_1:+16918317 | None:intergenic |
| AACCCAACAAACACTGTCTT+TGG | 0.342536 | 7_1:-16918312 | Msa1011960:intron |
| CATACTCATGTGTTGGAGTA+TGG | 0.356134 | 7_1:-16918461 | Msa1011960:CDS |
| CTGCATGCGAAAAGGCAAAA+AGG | 0.362492 | 7_1:-16917297 | Msa1011960:CDS |
| ACTAATTCTCAAAGATTGAT+TGG | 0.363747 | 7_1:-16918363 | Msa1011960:CDS |
| AAATGTGAATATTTGCTTGA+TGG | 0.387306 | 7_1:-16916371 | Msa1011960:CDS |
| TGTCGATATTAAGGTTTATG+AGG | 0.393803 | 7_1:-16916783 | Msa1011960:CDS |
| GAGCATCTCTGAATCTACTT+TGG | 0.401167 | 7_1:-16916297 | Msa1011960:CDS |
| AGAAAGAATAAAGTGGATAT+TGG | 0.401372 | 7_1:-16917352 | Msa1011960:CDS |
| GCAGATGCTAAGAGGTTGAT+TGG | 0.405669 | 7_1:-16917898 | Msa1011960:intron |
| TGAGGAAAGCTATGAAGAAT+AGG | 0.409437 | 7_1:-16916451 | Msa1011960:CDS |
| TACCAAAGACAGTGTTTGTT+GGG | 0.412258 | 7_1:+16918310 | None:intergenic |
| ACATCTCGCAGAATCAAGTT+TGG | 0.413190 | 7_1:+16916929 | None:intergenic |
| CCACAAGCAACAACCTCGTC+AGG | 0.417206 | 7_1:+16916998 | None:intergenic |
| CATGTTAAGTTGCTCAAACT+TGG | 0.419674 | 7_1:+16917192 | None:intergenic |
| AAAGATGCGGGTGATATTGC+TGG | 0.420636 | 7_1:-16917622 | Msa1011960:CDS |
| AGCATCTCTGAATCTACTTT+GGG | 0.421845 | 7_1:-16916296 | Msa1011960:CDS |
| CTCATGTGTTGGAGTATGGC+AGG | 0.423477 | 7_1:-16918457 | Msa1011960:CDS |
| ACTGCAGCGGCTCTTGCATA+TGG | 0.423883 | 7_1:-16917568 | Msa1011960:CDS |
| AAATATGACGGAGTTGGTAT+AGG | 0.426037 | 7_1:-16918501 | Msa1011960:CDS |
| ACGCAGATGCGAGAGATTGC+AGG | 0.427220 | 7_1:-16917724 | Msa1011960:CDS |
| CTGCAGTAGCTGCTTCACTT+TGG | 0.436479 | 7_1:+16917060 | None:intergenic |
| AGCCAGTGATAATAACTTGC+TGG | 0.437095 | 7_1:-16916747 | Msa1011960:CDS |
| GTAGATGACGTTGTCCTTGT+TGG | 0.450093 | 7_1:-16917100 | Msa1011960:CDS |
| TATTACAATAACGAATGAAA+AGG | 0.463859 | 7_1:-16916597 | Msa1011960:CDS |
| TCATGGATGTCGTGATTCCT+AGG | 0.475972 | 7_1:-16916868 | Msa1011960:CDS |
| CGTTGGTTTGTCATTATCCC+CGG | 0.482591 | 7_1:+16917813 | None:intergenic |
| AGAAATAAATGGAGATCTCA+TGG | 0.486339 | 7_1:-16916885 | Msa1011960:CDS |
| AAAGGGATGGATGTGTTCCT+AGG | 0.489586 | 7_1:+16916851 | None:intergenic |
| GGAAGAAACCAATGTGTTTG+TGG | 0.491041 | 7_1:-16916339 | Msa1011960:CDS |
| GGACCTCTTTGAAAAGTGTA+TGG | 0.494403 | 7_1:-16917170 | Msa1011960:CDS |
| GGAAGGCTACCTCGAGGAGC+AGG | 0.495837 | 7_1:+16916701 | None:intergenic |
| GAAATAATTCACAATGATCA+AGG | 0.498950 | 7_1:-16918417 | Msa1011960:CDS |
| AGTTAATGCAGTTAATGCAT+TGG | 0.500050 | 7_1:-16916492 | Msa1011960:CDS |
| CGCAGATGCGAGAGATTGCA+GGG | 0.503178 | 7_1:-16917723 | Msa1011960:CDS |
| ATTGAAAACTGCATGCGAAA+AGG | 0.506576 | 7_1:-16917305 | Msa1011960:CDS |
| CCTTAATATCGACACTGCAT+TGG | 0.513687 | 7_1:+16916792 | None:intergenic |
| TGTGAATCATTAAAATAAGA+AGG | 0.515012 | 7_1:+16917658 | None:intergenic |
| ATTACAATAACGAATGAAAA+GGG | 0.518757 | 7_1:-16916596 | Msa1011960:CDS |
| GCCAGTGATAATAACTTGCT+GGG | 0.520732 | 7_1:-16916746 | Msa1011960:CDS |
| TAATGCAGTTAATGCATTGG+AGG | 0.520943 | 7_1:-16916489 | Msa1011960:CDS |
| CCTGACGAGGTTGTTGCTTG+TGG | 0.521258 | 7_1:-16916998 | Msa1011960:CDS |
| ATTTAAGAGAAAGAATAAAG+TGG | 0.521504 | 7_1:-16917359 | Msa1011960:CDS |
| TTGCATTGCTGATGCTAAGA+TGG | 0.521754 | 7_1:-16917134 | Msa1011960:CDS |
| TTTGCTTGATGGTGACAAGA+AGG | 0.525967 | 7_1:-16916360 | Msa1011960:CDS |
| AAATAATGTCTTTGAAGTCA+AGG | 0.528245 | 7_1:-16917452 | Msa1011960:CDS |
| TGTGTTTGTGGACATGTTGA+AGG | 0.529361 | 7_1:-16916327 | Msa1011960:CDS |
| GAGCTAATTGTGTTGAAGAG+AGG | 0.530891 | 7_1:-16917534 | Msa1011960:CDS |
| CAAAGTGAAGCAGCTACTGC+AGG | 0.533801 | 7_1:-16917059 | Msa1011960:CDS |
| AACGATTGTTGTCAACTACA+AGG | 0.537929 | 7_1:-16917794 | Msa1011960:CDS |
| ACCCAGCAAGTTATTATCAC+TGG | 0.544741 | 7_1:+16916745 | None:intergenic |
| TTACCAAAGACAGTGTTTGT+TGG | 0.544855 | 7_1:+16918309 | None:intergenic |
| ATGAAAAGGGAAGGCTGTCA+AGG | 0.545587 | 7_1:-16916583 | Msa1011960:CDS |
| GATGACGTTGTCCTTGTTGG+TGG | 0.546302 | 7_1:-16917097 | Msa1011960:CDS |
| TTAGTAAAAGCAACACAAGA+AGG | 0.546731 | 7_1:+16918381 | None:intergenic |
| GTCGATATTAAGGTTTATGA+GGG | 0.551262 | 7_1:-16916782 | Msa1011960:CDS |
| CAACATGTCCACAAACACAT+TGG | 0.554939 | 7_1:+16916331 | None:intergenic |
| CAGGCTGCTTTGCTGAGTGA+AGG | 0.555191 | 7_1:-16916965 | Msa1011960:CDS |
| CTCAAAATGATATTATATTG+TGG | 0.556273 | 7_1:-16917852 | Msa1011960:CDS |
| ATGCTAAGAGGTTGATTGGA+AGG | 0.557766 | 7_1:-16917894 | Msa1011960:CDS |
| GCAGAGAAATATGACGGAGT+TGG | 0.558542 | 7_1:-16918507 | Msa1011960:CDS |
| CGAAGAGCTACCAAAGATGC+GGG | 0.562724 | 7_1:-16917634 | Msa1011960:CDS |
| GATGTCACTTCATTGTCACT+TGG | 0.563083 | 7_1:-16916911 | Msa1011960:CDS |
| GACATAGATGTTATATGTGA+GGG | 0.567287 | 7_1:-16917244 | Msa1011960:CDS |
| AGGACTATCTTTACAATGTG+AGG | 0.577804 | 7_1:-16916469 | Msa1011960:CDS |
| TATAACATCTATGTCAATTG+TGG | 0.581059 | 7_1:+16917252 | None:intergenic |
| GGCACAACATACTCATGTGT+TGG | 0.583777 | 7_1:-16918468 | Msa1011960:CDS |
| CAAGTTTGAGCAACTTAACA+TGG | 0.584531 | 7_1:-16917191 | Msa1011960:CDS |
| TATGCAAGAGCCGCTGCAGT+CGG | 0.586912 | 7_1:+16917571 | None:intergenic |
| TCATGTGTTGGAGTATGGCA+GGG | 0.588716 | 7_1:-16918456 | Msa1011960:CDS |
| GAGGTGAGTGTCTCCAGAAG+TGG | 0.591955 | 7_1:+16917429 | None:intergenic |
| GTGTGAACTCCAAAGCCCTA+AGG | 0.595455 | 7_1:-16917330 | Msa1011960:CDS |
| TGACATAGATGTTATATGTG+AGG | 0.601635 | 7_1:-16917245 | Msa1011960:CDS |
| CATGTGTTGGAGTATGGCAG+GGG | 0.603714 | 7_1:-16918455 | Msa1011960:CDS |
| TGAAAAGGGAAGGCTGTCAA+GGG | 0.609208 | 7_1:-16916582 | Msa1011960:CDS |
| CAATAACGAATGAAAAGGGA+AGG | 0.616163 | 7_1:-16916592 | Msa1011960:CDS |
| AGGCTACCTCGAGGAGCAGG+AGG | 0.617156 | 7_1:+16916704 | None:intergenic |
| AGACACTCACCTCGGAGGAG+AGG | 0.619985 | 7_1:-16917419 | Msa1011960:CDS |
| CACATGAGTATGTTGTGCCA+AGG | 0.622899 | 7_1:+16918472 | None:intergenic |
| AAAAGCAACACAAGAAGGAG+TGG | 0.623125 | 7_1:+16918386 | None:intergenic |
| AGAGGACTTTGATAATCGAA+TGG | 0.626059 | 7_1:-16917401 | Msa1011960:CDS |
| GCGAAGAGCTACCAAAGATG+CGG | 0.633114 | 7_1:-16917635 | Msa1011960:CDS |
| GTTGGTATAGGAATTGACCT+TGG | 0.634186 | 7_1:-16918489 | Msa1011960:CDS |
| TATATTAAACGTCTCTGCAG+AGG | 0.643649 | 7_1:-16916645 | Msa1011960:CDS |
| TCTGTTCCTCCTGCTCCTCG+AGG | 0.645355 | 7_1:-16916710 | Msa1011960:CDS |
| CACAAGCAACAACCTCGTCA+GGG | 0.645372 | 7_1:+16916999 | None:intergenic |
| AGAATGGCAGAGAAATATGA+CGG | 0.645453 | 7_1:-16918513 | Msa1011960:CDS |
| TTGTAGTTGACAACAATCGT+TGG | 0.646959 | 7_1:+16917796 | None:intergenic |
| AATCAATGAACCGACTGCAG+CGG | 0.648971 | 7_1:-16917581 | Msa1011960:CDS |
| GACACTTTCATATGATACTG+AGG | 0.649098 | 7_1:-16917275 | Msa1011960:CDS |
| TTCTAGAAGAACCACCAACA+AGG | 0.656258 | 7_1:+16917086 | None:intergenic |
| ACGATTGTTGTCAACTACAA+GGG | 0.662930 | 7_1:-16917793 | Msa1011960:CDS |
| AATGGTGAATCACTTCGTGA+AGG | 0.663773 | 7_1:-16917383 | Msa1011960:CDS |
| CAAGAGCATTAACCCTGACG+AGG | 0.667838 | 7_1:-16917011 | Msa1011960:CDS |
| CTGATATTTCTTCAGCAACG+AGG | 0.669575 | 7_1:+16917758 | None:intergenic |
| TTGCTGGTCTCAATGTAATG+CGG | 0.689400 | 7_1:-16917606 | Msa1011960:CDS |
| ACTTCTGGAGACACTCACCT+CGG | 0.689586 | 7_1:-16917427 | Msa1011960:CDS |
| TATCAAAGTCCTCTCCTCCG+AGG | 0.696240 | 7_1:+16917410 | None:intergenic |
| TTTATAGGAAGGCTACCTCG+AGG | 0.704192 | 7_1:+16916695 | None:intergenic |
| TCTGGAGACACTCACCTCGG+AGG | 0.712848 | 7_1:-16917424 | Msa1011960:CDS |
| TCTGCAGAGGAAGAATCCAG+CGG | 0.740877 | 7_1:-16916632 | Msa1011960:CDS |
| GCAGATGCGAGAGATTGCAG+GGG | 0.747118 | 7_1:-16917722 | Msa1011960:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCGTACAAATTTTTATTTA+AGG | - | chr7_1:16916628-16916647 | Msa1011960:CDS | 15.0% |
| !! | AAATATATAGGGAATATAAA+AGG | + | chr7_1:16916662-16916681 | None:intergenic | 15.0% |
| !!! | AAAATTTTCATTTTTGATCT+TGG | - | chr7_1:16917276-16917295 | Msa1011960:CDS | 15.0% |
| !!! | AGACATTATTTTTAATTGTA+AGG | + | chr7_1:16917326-16917345 | None:intergenic | 15.0% |
| !!! | ATCGTACAAATTTTTATTTA+AGG | - | chr7_1:16916628-16916647 | Msa1011960:CDS | 15.0% |
| !! | AAATATATAGGGAATATAAA+AGG | + | chr7_1:16916662-16916681 | None:intergenic | 15.0% |
| !!! | AAAATTTTCATTTTTGATCT+TGG | - | chr7_1:16917276-16917295 | Msa1011960:CDS | 15.0% |
| !!! | AGACATTATTTTTAATTGTA+AGG | + | chr7_1:16917326-16917345 | None:intergenic | 15.0% |
| !!! | TCATTGCTTAAATTTAAGTT+AGG | - | chr7_1:16916525-16916544 | Msa1011960:CDS | 20.0% |
| !!! | CATTGCTTAAATTTAAGTTA+GGG | - | chr7_1:16916526-16916545 | Msa1011960:CDS | 20.0% |
| !! | AATAAAAATTTGTACGATGA+GGG | + | chr7_1:16916626-16916645 | None:intergenic | 20.0% |
| !! | AAATAAAAATTTGTACGATG+AGG | + | chr7_1:16916627-16916646 | None:intergenic | 20.0% |
| !!! | CGAAAAGTTTGAAATATATA+GGG | + | chr7_1:16916673-16916692 | None:intergenic | 20.0% |
| !! | CTCAAAATGATATTATATTG+TGG | - | chr7_1:16916935-16916954 | Msa1011960:CDS | 20.0% |
| !! | TGTGAATCATTAAAATAAGA+AGG | + | chr7_1:16917132-16917151 | None:intergenic | 20.0% |
| !! | ATTTAAGAGAAAGAATAAAG+TGG | - | chr7_1:16917428-16917447 | Msa1011960:CDS | 20.0% |
| !!! | ATGTTTTTGTCTTTTTGAAA+GGG | + | chr7_1:16917956-16917975 | None:intergenic | 20.0% |
| !!! | TATGTTTTTGTCTTTTTGAA+AGG | + | chr7_1:16917957-16917976 | None:intergenic | 20.0% |
| !!! | ATAGAAAAGCATTCTTTTAT+AGG | + | chr7_1:16918110-16918129 | None:intergenic | 20.0% |
| !! | TATTACAATAACGAATGAAA+AGG | - | chr7_1:16918190-16918209 | Msa1011960:intron | 20.0% |
| !! | ATTACAATAACGAATGAAAA+GGG | - | chr7_1:16918191-16918210 | Msa1011960:intron | 20.0% |
| !!! | TCATTGCTTAAATTTAAGTT+AGG | - | chr7_1:16916525-16916544 | Msa1011960:CDS | 20.0% |
| !!! | CATTGCTTAAATTTAAGTTA+GGG | - | chr7_1:16916526-16916545 | Msa1011960:CDS | 20.0% |
| !! | AATAAAAATTTGTACGATGA+GGG | + | chr7_1:16916626-16916645 | None:intergenic | 20.0% |
| !! | AAATAAAAATTTGTACGATG+AGG | + | chr7_1:16916627-16916646 | None:intergenic | 20.0% |
| !!! | CGAAAAGTTTGAAATATATA+GGG | + | chr7_1:16916673-16916692 | None:intergenic | 20.0% |
| !! | CTCAAAATGATATTATATTG+TGG | - | chr7_1:16916935-16916954 | Msa1011960:CDS | 20.0% |
| !! | TGTGAATCATTAAAATAAGA+AGG | + | chr7_1:16917132-16917151 | None:intergenic | 20.0% |
| !! | ATTTAAGAGAAAGAATAAAG+TGG | - | chr7_1:16917428-16917447 | Msa1011960:CDS | 20.0% |
| !!! | ATGTTTTTGTCTTTTTGAAA+GGG | + | chr7_1:16917956-16917975 | None:intergenic | 20.0% |
| !!! | TATGTTTTTGTCTTTTTGAA+AGG | + | chr7_1:16917957-16917976 | None:intergenic | 20.0% |
| !!! | ATAGAAAAGCATTCTTTTAT+AGG | + | chr7_1:16918110-16918129 | None:intergenic | 20.0% |
| !! | TATTACAATAACGAATGAAA+AGG | - | chr7_1:16918190-16918209 | Msa1011960:intron | 20.0% |
| !! | ATTACAATAACGAATGAAAA+GGG | - | chr7_1:16918191-16918210 | Msa1011960:intron | 20.0% |
| ! | GAAATAATTCACAATGATCA+AGG | - | chr7_1:16916370-16916389 | Msa1011960:CDS | 25.0% |
| ! | ACTAATTCTCAAAGATTGAT+TGG | - | chr7_1:16916424-16916443 | Msa1011960:CDS | 25.0% |
| !! | CTTAAATTTAAGTTAGGGTT+AGG | - | chr7_1:16916531-16916550 | Msa1011960:CDS | 25.0% |
| ! | TAAACATGTTAACTGTATAG+CGG | + | chr7_1:16916568-16916587 | None:intergenic | 25.0% |
| !! | GCGAAAAGTTTGAAATATAT+AGG | + | chr7_1:16916674-16916693 | None:intergenic | 25.0% |
| !!! | TTAGTATTGTACTCACTTTT+CGG | + | chr7_1:16916775-16916794 | None:intergenic | 25.0% |
| ! | AGATGTTCAAAATGATAACT+AGG | + | chr7_1:16916836-16916855 | None:intergenic | 25.0% |
| !! | TATTATATTGTGGCCTTTTA+AGG | - | chr7_1:16916945-16916964 | Msa1011960:CDS | 25.0% |
| !!! | ATTTTCATTTTTGATCTTGG+TGG | - | chr7_1:16917279-16917298 | Msa1011960:CDS | 25.0% |
| !!! | AAATAATGTCTTTGAAGTCA+AGG | - | chr7_1:16917335-16917354 | Msa1011960:CDS | 25.0% |
| ! | AGAAAGAATAAAGTGGATAT+TGG | - | chr7_1:16917435-16917454 | Msa1011960:CDS | 25.0% |
| ! | TATAACATCTATGTCAATTG+TGG | + | chr7_1:16917538-16917557 | None:intergenic | 25.0% |
| ! | TCACTTGGTTTAGAAATAAA+TGG | - | chr7_1:16917891-16917910 | Msa1011960:CDS | 25.0% |
| !!! | AAAAGCATTCTTTTATAGGA+AGG | + | chr7_1:16918106-16918125 | None:intergenic | 25.0% |
| !! | TCAAGAAGCTAAGAATTTTA+AGG | - | chr7_1:16918247-16918266 | Msa1011960:intron | 25.0% |
| !!! | ATCTTATTTTTGCTTTGTGT+TGG | + | chr7_1:16918380-16918399 | None:intergenic | 25.0% |
| ! | AAATGTGAATATTTGCTTGA+TGG | - | chr7_1:16918416-16918435 | Msa1011960:CDS | 25.0% |
| ! | GAAATAATTCACAATGATCA+AGG | - | chr7_1:16916370-16916389 | Msa1011960:CDS | 25.0% |
| ! | ACTAATTCTCAAAGATTGAT+TGG | - | chr7_1:16916424-16916443 | Msa1011960:CDS | 25.0% |
| !! | CTTAAATTTAAGTTAGGGTT+AGG | - | chr7_1:16916531-16916550 | Msa1011960:CDS | 25.0% |
| ! | TAAACATGTTAACTGTATAG+CGG | + | chr7_1:16916568-16916587 | None:intergenic | 25.0% |
| !! | GCGAAAAGTTTGAAATATAT+AGG | + | chr7_1:16916674-16916693 | None:intergenic | 25.0% |
| !!! | TTAGTATTGTACTCACTTTT+CGG | + | chr7_1:16916775-16916794 | None:intergenic | 25.0% |
| ! | AGATGTTCAAAATGATAACT+AGG | + | chr7_1:16916836-16916855 | None:intergenic | 25.0% |
| !! | TATTATATTGTGGCCTTTTA+AGG | - | chr7_1:16916945-16916964 | Msa1011960:CDS | 25.0% |
| !!! | ATTTTCATTTTTGATCTTGG+TGG | - | chr7_1:16917279-16917298 | Msa1011960:CDS | 25.0% |
| !!! | AAATAATGTCTTTGAAGTCA+AGG | - | chr7_1:16917335-16917354 | Msa1011960:CDS | 25.0% |
| ! | AGAAAGAATAAAGTGGATAT+TGG | - | chr7_1:16917435-16917454 | Msa1011960:CDS | 25.0% |
| ! | TATAACATCTATGTCAATTG+TGG | + | chr7_1:16917538-16917557 | None:intergenic | 25.0% |
| ! | TCACTTGGTTTAGAAATAAA+TGG | - | chr7_1:16917891-16917910 | Msa1011960:CDS | 25.0% |
| !!! | AAAAGCATTCTTTTATAGGA+AGG | + | chr7_1:16918106-16918125 | None:intergenic | 25.0% |
| !! | TCAAGAAGCTAAGAATTTTA+AGG | - | chr7_1:16918247-16918266 | Msa1011960:intron | 25.0% |
| !!! | ATCTTATTTTTGCTTTGTGT+TGG | + | chr7_1:16918380-16918399 | None:intergenic | 25.0% |
| ! | AAATGTGAATATTTGCTTGA+TGG | - | chr7_1:16918416-16918435 | Msa1011960:CDS | 25.0% |
| TTAGTAAAAGCAACACAAGA+AGG | + | chr7_1:16916409-16916428 | None:intergenic | 30.0% | |
| ! | TCAAACTTTTCGCTAAAGTT+AGG | - | chr7_1:16916681-16916700 | Msa1011960:CDS | 30.0% |
| TAGCATCTGCAAAATCAAAA+TGG | + | chr7_1:16916879-16916898 | None:intergenic | 30.0% | |
| !!! | CACAATTAGCTCTTTTTTGA+AGG | + | chr7_1:16917245-16917264 | None:intergenic | 30.0% |
| TGACATAGATGTTATATGTG+AGG | - | chr7_1:16917542-16917561 | Msa1011960:CDS | 30.0% | |
| GACATAGATGTTATATGTGA+GGG | - | chr7_1:16917543-16917562 | Msa1011960:CDS | 30.0% | |
| AGAAATAAATGGAGATCTCA+TGG | - | chr7_1:16917902-16917921 | Msa1011960:intron | 30.0% | |
| !! | TTTTGTCTTTTTGAAAGGGA+TGG | + | chr7_1:16917952-16917971 | None:intergenic | 30.0% |
| TGTCGATATTAAGGTTTATG+AGG | - | chr7_1:16918004-16918023 | Msa1011960:intron | 30.0% | |
| GTCGATATTAAGGTTTATGA+GGG | - | chr7_1:16918005-16918024 | Msa1011960:intron | 30.0% | |
| ! | TGCTTTTCTATAGATGTTGA+TGG | - | chr7_1:16918119-16918138 | Msa1011960:intron | 30.0% |
| AGTTAATGCAGTTAATGCAT+TGG | - | chr7_1:16918295-16918314 | Msa1011960:intron | 30.0% | |
| ACTTTGGGCATGAAAAAAAA+TGG | - | chr7_1:16918506-16918525 | Msa1011960:CDS | 30.0% | |
| TTAGTAAAAGCAACACAAGA+AGG | + | chr7_1:16916409-16916428 | None:intergenic | 30.0% | |
| ! | TCAAACTTTTCGCTAAAGTT+AGG | - | chr7_1:16916681-16916700 | Msa1011960:CDS | 30.0% |
| TAGCATCTGCAAAATCAAAA+TGG | + | chr7_1:16916879-16916898 | None:intergenic | 30.0% | |
| !!! | CACAATTAGCTCTTTTTTGA+AGG | + | chr7_1:16917245-16917264 | None:intergenic | 30.0% |
| TGACATAGATGTTATATGTG+AGG | - | chr7_1:16917542-16917561 | Msa1011960:CDS | 30.0% | |
| GACATAGATGTTATATGTGA+GGG | - | chr7_1:16917543-16917562 | Msa1011960:CDS | 30.0% | |
| AGAAATAAATGGAGATCTCA+TGG | - | chr7_1:16917902-16917921 | Msa1011960:intron | 30.0% | |
| !! | TTTTGTCTTTTTGAAAGGGA+TGG | + | chr7_1:16917952-16917971 | None:intergenic | 30.0% |
| TGTCGATATTAAGGTTTATG+AGG | - | chr7_1:16918004-16918023 | Msa1011960:intron | 30.0% | |
| GTCGATATTAAGGTTTATGA+GGG | - | chr7_1:16918005-16918024 | Msa1011960:intron | 30.0% | |
| ! | TGCTTTTCTATAGATGTTGA+TGG | - | chr7_1:16918119-16918138 | Msa1011960:intron | 30.0% |
| AGTTAATGCAGTTAATGCAT+TGG | - | chr7_1:16918295-16918314 | Msa1011960:intron | 30.0% | |
| ACTTTGGGCATGAAAAAAAA+TGG | - | chr7_1:16918506-16918525 | Msa1011960:CDS | 30.0% | |
| !! | AAATATGACGGAGTTGGTAT+AGG | - | chr7_1:16916286-16916305 | Msa1011960:CDS | 35.0% |
| ! | GTTAGAGGAAGCTTGATTTT+TGG | + | chr7_1:16916458-16916477 | None:intergenic | 35.0% |
| TACCAAAGACAGTGTTTGTT+GGG | + | chr7_1:16916480-16916499 | None:intergenic | 35.0% | |
| TTACCAAAGACAGTGTTTGT+TGG | + | chr7_1:16916481-16916500 | None:intergenic | 35.0% | |
| ! | TTGATTTTGCAGATGCTAAG+AGG | - | chr7_1:16916881-16916900 | Msa1011960:CDS | 35.0% |
| TTGTAGTTGACAACAATCGT+TGG | + | chr7_1:16916994-16917013 | None:intergenic | 35.0% | |
| AACGATTGTTGTCAACTACA+AGG | - | chr7_1:16916993-16917012 | Msa1011960:CDS | 35.0% | |
| ACGATTGTTGTCAACTACAA+GGG | - | chr7_1:16916994-16917013 | Msa1011960:CDS | 35.0% | |
| !! | TTCATTTTTGATCTTGGTGG+TGG | - | chr7_1:16917282-16917301 | Msa1011960:CDS | 35.0% |
| ! | AGAGGACTTTGATAATCGAA+TGG | - | chr7_1:16917386-16917405 | Msa1011960:CDS | 35.0% |
| ! | TGCAGTTTTCAATCTCCTTA+GGG | + | chr7_1:16917475-16917494 | None:intergenic | 35.0% |
| ! | ATGCAGTTTTCAATCTCCTT+AGG | + | chr7_1:16917476-16917495 | None:intergenic | 35.0% |
| ATTGAAAACTGCATGCGAAA+AGG | - | chr7_1:16917482-16917501 | Msa1011960:CDS | 35.0% | |
| GACACTTTCATATGATACTG+AGG | - | chr7_1:16917512-16917531 | Msa1011960:CDS | 35.0% | |
| ! | CATGTTAAGTTGCTCAAACT+TGG | + | chr7_1:16917598-16917617 | None:intergenic | 35.0% |
| CAAGTTTGAGCAACTTAACA+TGG | - | chr7_1:16917596-16917615 | Msa1011960:CDS | 35.0% | |
| ! | TCTCCATACACTTTTCAAAG+AGG | + | chr7_1:16917623-16917642 | None:intergenic | 35.0% |
| !!! | TACTGCAGGACTTTTTCAAT+GGG | - | chr7_1:16917742-16917761 | Msa1011960:CDS | 35.0% |
| TATATTAAACGTCTCTGCAG+AGG | - | chr7_1:16918142-16918161 | Msa1011960:intron | 35.0% | |
| ! | AATATCTCTTTTATTGCCGC+TGG | + | chr7_1:16918174-16918193 | None:intergenic | 35.0% |
| CAATAACGAATGAAAAGGGA+AGG | - | chr7_1:16918195-16918214 | Msa1011960:intron | 35.0% | |
| TAATGCAGTTAATGCATTGG+AGG | - | chr7_1:16918298-16918317 | Msa1011960:intron | 35.0% | |
| AGGACTATCTTTACAATGTG+AGG | - | chr7_1:16918318-16918337 | Msa1011960:CDS | 35.0% | |
| TGAGGAAAGCTATGAAGAAT+AGG | - | chr7_1:16918336-16918355 | Msa1011960:CDS | 35.0% | |
| AGCATCTCTGAATCTACTTT+GGG | - | chr7_1:16918491-16918510 | Msa1011960:CDS | 35.0% | |
| !! | AAATATGACGGAGTTGGTAT+AGG | - | chr7_1:16916286-16916305 | Msa1011960:CDS | 35.0% |
| ! | GTTAGAGGAAGCTTGATTTT+TGG | + | chr7_1:16916458-16916477 | None:intergenic | 35.0% |
| TACCAAAGACAGTGTTTGTT+GGG | + | chr7_1:16916480-16916499 | None:intergenic | 35.0% | |
| TTACCAAAGACAGTGTTTGT+TGG | + | chr7_1:16916481-16916500 | None:intergenic | 35.0% | |
| ! | TTGATTTTGCAGATGCTAAG+AGG | - | chr7_1:16916881-16916900 | Msa1011960:CDS | 35.0% |
| TTGTAGTTGACAACAATCGT+TGG | + | chr7_1:16916994-16917013 | None:intergenic | 35.0% | |
| AACGATTGTTGTCAACTACA+AGG | - | chr7_1:16916993-16917012 | Msa1011960:CDS | 35.0% | |
| ACGATTGTTGTCAACTACAA+GGG | - | chr7_1:16916994-16917013 | Msa1011960:CDS | 35.0% | |
| !! | TTCATTTTTGATCTTGGTGG+TGG | - | chr7_1:16917282-16917301 | Msa1011960:CDS | 35.0% |
| ! | AGAGGACTTTGATAATCGAA+TGG | - | chr7_1:16917386-16917405 | Msa1011960:CDS | 35.0% |
| ! | TGCAGTTTTCAATCTCCTTA+GGG | + | chr7_1:16917475-16917494 | None:intergenic | 35.0% |
| ! | ATGCAGTTTTCAATCTCCTT+AGG | + | chr7_1:16917476-16917495 | None:intergenic | 35.0% |
| ATTGAAAACTGCATGCGAAA+AGG | - | chr7_1:16917482-16917501 | Msa1011960:CDS | 35.0% | |
| GACACTTTCATATGATACTG+AGG | - | chr7_1:16917512-16917531 | Msa1011960:CDS | 35.0% | |
| ! | CATGTTAAGTTGCTCAAACT+TGG | + | chr7_1:16917598-16917617 | None:intergenic | 35.0% |
| CAAGTTTGAGCAACTTAACA+TGG | - | chr7_1:16917596-16917615 | Msa1011960:CDS | 35.0% | |
| ! | TCTCCATACACTTTTCAAAG+AGG | + | chr7_1:16917623-16917642 | None:intergenic | 35.0% |
| !!! | TACTGCAGGACTTTTTCAAT+GGG | - | chr7_1:16917742-16917761 | Msa1011960:CDS | 35.0% |
| TATATTAAACGTCTCTGCAG+AGG | - | chr7_1:16918142-16918161 | Msa1011960:intron | 35.0% | |
| ! | AATATCTCTTTTATTGCCGC+TGG | + | chr7_1:16918174-16918193 | None:intergenic | 35.0% |
| CAATAACGAATGAAAAGGGA+AGG | - | chr7_1:16918195-16918214 | Msa1011960:intron | 35.0% | |
| TAATGCAGTTAATGCATTGG+AGG | - | chr7_1:16918298-16918317 | Msa1011960:intron | 35.0% | |
| AGGACTATCTTTACAATGTG+AGG | - | chr7_1:16918318-16918337 | Msa1011960:CDS | 35.0% | |
| TGAGGAAAGCTATGAAGAAT+AGG | - | chr7_1:16918336-16918355 | Msa1011960:CDS | 35.0% | |
| AGCATCTCTGAATCTACTTT+GGG | - | chr7_1:16918491-16918510 | Msa1011960:CDS | 35.0% | |
| GTTGGTATAGGAATTGACCT+TGG | - | chr7_1:16916298-16916317 | Msa1011960:CDS | 40.0% | |
| CATACTCATGTGTTGGAGTA+TGG | - | chr7_1:16916326-16916345 | Msa1011960:CDS | 40.0% | |
| AAAAGCAACACAAGAAGGAG+TGG | + | chr7_1:16916404-16916423 | None:intergenic | 40.0% | |
| AACCCAACAAACACTGTCTT+TGG | - | chr7_1:16916475-16916494 | Msa1011960:CDS | 40.0% | |
| !! | GACTACACAATGGGTTAAAG+GGG | + | chr7_1:16916604-16916623 | None:intergenic | 40.0% |
| !! | GGACTACACAATGGGTTAAA+GGG | + | chr7_1:16916605-16916624 | None:intergenic | 40.0% |
| ! | ATGCTAAGAGGTTGATTGGA+AGG | - | chr7_1:16916893-16916912 | Msa1011960:CDS | 40.0% |
| CTGATATTTCTTCAGCAACG+AGG | + | chr7_1:16917032-16917051 | None:intergenic | 40.0% | |
| ! | TTGCTGGTCTCAATGTAATG+CGG | - | chr7_1:16917181-16917200 | Msa1011960:CDS | 40.0% |
| GAGCTAATTGTGTTGAAGAG+AGG | - | chr7_1:16917253-16917272 | Msa1011960:CDS | 40.0% | |
| AATGGTGAATCACTTCGTGA+AGG | - | chr7_1:16917404-16917423 | Msa1011960:CDS | 40.0% | |
| TTTCAATCTCCTTAGGGCTT+TGG | + | chr7_1:16917469-16917488 | None:intergenic | 40.0% | |
| ! | GGACCTCTTTGAAAAGTGTA+TGG | - | chr7_1:16917617-16917636 | Msa1011960:CDS | 40.0% |
| TTGCATTGCTGATGCTAAGA+TGG | - | chr7_1:16917653-16917672 | Msa1011960:CDS | 40.0% | |
| ! | TTCTAGAAGAACCACCAACA+AGG | + | chr7_1:16917704-16917723 | None:intergenic | 40.0% |
| !!! | CTACTGCAGGACTTTTTCAA+TGG | - | chr7_1:16917741-16917760 | Msa1011960:CDS | 40.0% |
| ACATCTCGCAGAATCAAGTT+TGG | + | chr7_1:16917861-16917880 | None:intergenic | 40.0% | |
| ! | GATGTCACTTCATTGTCACT+TGG | - | chr7_1:16917876-16917895 | Msa1011960:CDS | 40.0% |
| CCTTAATATCGACACTGCAT+TGG | + | chr7_1:16917998-16918017 | None:intergenic | 40.0% | |
| !! | CCAATGCAGTGTCGATATTA+AGG | - | chr7_1:16917995-16918014 | Msa1011960:intron | 40.0% |
| ! | AGCCAGTGATAATAACTTGC+TGG | - | chr7_1:16918040-16918059 | Msa1011960:intron | 40.0% |
| !! | GCCAGTGATAATAACTTGCT+GGG | - | chr7_1:16918041-16918060 | Msa1011960:intron | 40.0% |
| ACCCAGCAAGTTATTATCAC+TGG | + | chr7_1:16918045-16918064 | None:intergenic | 40.0% | |
| !! | TTTGCTTGATGGTGACAAGA+AGG | - | chr7_1:16918427-16918446 | Msa1011960:CDS | 40.0% |
| GGAAGAAACCAATGTGTTTG+TGG | - | chr7_1:16918448-16918467 | Msa1011960:CDS | 40.0% | |
| CAACATGTCCACAAACACAT+TGG | + | chr7_1:16918459-16918478 | None:intergenic | 40.0% | |
| TGTGTTTGTGGACATGTTGA+AGG | - | chr7_1:16918460-16918479 | Msa1011960:CDS | 40.0% | |
| GAGCATCTCTGAATCTACTT+TGG | - | chr7_1:16918490-16918509 | Msa1011960:CDS | 40.0% | |
| GTTGGTATAGGAATTGACCT+TGG | - | chr7_1:16916298-16916317 | Msa1011960:CDS | 40.0% | |
| CATACTCATGTGTTGGAGTA+TGG | - | chr7_1:16916326-16916345 | Msa1011960:CDS | 40.0% | |
| AAAAGCAACACAAGAAGGAG+TGG | + | chr7_1:16916404-16916423 | None:intergenic | 40.0% | |
| AACCCAACAAACACTGTCTT+TGG | - | chr7_1:16916475-16916494 | Msa1011960:CDS | 40.0% | |
| !! | GACTACACAATGGGTTAAAG+GGG | + | chr7_1:16916604-16916623 | None:intergenic | 40.0% |
| !! | GGACTACACAATGGGTTAAA+GGG | + | chr7_1:16916605-16916624 | None:intergenic | 40.0% |
| ! | ATGCTAAGAGGTTGATTGGA+AGG | - | chr7_1:16916893-16916912 | Msa1011960:CDS | 40.0% |
| CTGATATTTCTTCAGCAACG+AGG | + | chr7_1:16917032-16917051 | None:intergenic | 40.0% | |
| ! | TTGCTGGTCTCAATGTAATG+CGG | - | chr7_1:16917181-16917200 | Msa1011960:CDS | 40.0% |
| GAGCTAATTGTGTTGAAGAG+AGG | - | chr7_1:16917253-16917272 | Msa1011960:CDS | 40.0% | |
| AATGGTGAATCACTTCGTGA+AGG | - | chr7_1:16917404-16917423 | Msa1011960:CDS | 40.0% | |
| TTTCAATCTCCTTAGGGCTT+TGG | + | chr7_1:16917469-16917488 | None:intergenic | 40.0% | |
| ! | GGACCTCTTTGAAAAGTGTA+TGG | - | chr7_1:16917617-16917636 | Msa1011960:CDS | 40.0% |
| TTGCATTGCTGATGCTAAGA+TGG | - | chr7_1:16917653-16917672 | Msa1011960:CDS | 40.0% | |
| ! | TTCTAGAAGAACCACCAACA+AGG | + | chr7_1:16917704-16917723 | None:intergenic | 40.0% |
| !!! | CTACTGCAGGACTTTTTCAA+TGG | - | chr7_1:16917741-16917760 | Msa1011960:CDS | 40.0% |
| ACATCTCGCAGAATCAAGTT+TGG | + | chr7_1:16917861-16917880 | None:intergenic | 40.0% | |
| ! | GATGTCACTTCATTGTCACT+TGG | - | chr7_1:16917876-16917895 | Msa1011960:CDS | 40.0% |
| CCTTAATATCGACACTGCAT+TGG | + | chr7_1:16917998-16918017 | None:intergenic | 40.0% | |
| !! | CCAATGCAGTGTCGATATTA+AGG | - | chr7_1:16917995-16918014 | Msa1011960:intron | 40.0% |
| ! | AGCCAGTGATAATAACTTGC+TGG | - | chr7_1:16918040-16918059 | Msa1011960:intron | 40.0% |
| !! | GCCAGTGATAATAACTTGCT+GGG | - | chr7_1:16918041-16918060 | Msa1011960:intron | 40.0% |
| ACCCAGCAAGTTATTATCAC+TGG | + | chr7_1:16918045-16918064 | None:intergenic | 40.0% | |
| !! | TTTGCTTGATGGTGACAAGA+AGG | - | chr7_1:16918427-16918446 | Msa1011960:CDS | 40.0% |
| GGAAGAAACCAATGTGTTTG+TGG | - | chr7_1:16918448-16918467 | Msa1011960:CDS | 40.0% | |
| CAACATGTCCACAAACACAT+TGG | + | chr7_1:16918459-16918478 | None:intergenic | 40.0% | |
| TGTGTTTGTGGACATGTTGA+AGG | - | chr7_1:16918460-16918479 | Msa1011960:CDS | 40.0% | |
| GAGCATCTCTGAATCTACTT+TGG | - | chr7_1:16918490-16918509 | Msa1011960:CDS | 40.0% | |
| ! | GCAGAGAAATATGACGGAGT+TGG | - | chr7_1:16916280-16916299 | Msa1011960:CDS | 45.0% |
| CACATGAGTATGTTGTGCCA+AGG | + | chr7_1:16916318-16916337 | None:intergenic | 45.0% | |
| GGCACAACATACTCATGTGT+TGG | - | chr7_1:16916319-16916338 | Msa1011960:CDS | 45.0% | |
| TCATGTGTTGGAGTATGGCA+GGG | - | chr7_1:16916331-16916350 | Msa1011960:CDS | 45.0% | |
| ! | GACAGTGTTTGTTGGGTTAG+AGG | + | chr7_1:16916473-16916492 | None:intergenic | 45.0% |
| !! | GGGACTACACAATGGGTTAA+AGG | + | chr7_1:16916606-16916625 | None:intergenic | 45.0% |
| ACGATGAGGGACTACACAAT+GGG | + | chr7_1:16916613-16916632 | None:intergenic | 45.0% | |
| TACGATGAGGGACTACACAA+TGG | + | chr7_1:16916614-16916633 | None:intergenic | 45.0% | |
| ! | GCAGATGCTAAGAGGTTGAT+TGG | - | chr7_1:16916889-16916908 | Msa1011960:CDS | 45.0% |
| !!! | TGGCCTTTTAAGGTCATTGC+CGG | - | chr7_1:16916955-16916974 | Msa1011960:CDS | 45.0% |
| !! | CGTTGGTTTGTCATTATCCC+CGG | + | chr7_1:16916977-16916996 | None:intergenic | 45.0% |
| !!! | AGAGATTGCAGGGGCATTTT+TGG | - | chr7_1:16917074-16917093 | Msa1011960:CDS | 45.0% |
| AGCAATATCACCCGCATCTT+TGG | + | chr7_1:16917166-16917185 | None:intergenic | 45.0% | |
| AAAGATGCGGGTGATATTGC+TGG | - | chr7_1:16917165-16917184 | Msa1011960:CDS | 45.0% | |
| AATCAATGAACCGACTGCAG+CGG | - | chr7_1:16917206-16917225 | Msa1011960:CDS | 45.0% | |
| ! | TTTGAAGTCAAGGCCACTTC+TGG | - | chr7_1:16917345-16917364 | Msa1011960:CDS | 45.0% |
| CTGCATGCGAAAAGGCAAAA+AGG | - | chr7_1:16917490-16917509 | Msa1011960:CDS | 45.0% | |
| GTAGATGACGTTGTCCTTGT+TGG | - | chr7_1:16917687-16917706 | Msa1011960:CDS | 45.0% | |
| TGCAGTAGCTGCTTCACTTT+GGG | + | chr7_1:16917729-16917748 | None:intergenic | 45.0% | |
| TCATGGATGTCGTGATTCCT+AGG | - | chr7_1:16917919-16917938 | Msa1011960:intron | 45.0% | |
| AAAGGGATGGATGTGTTCCT+AGG | + | chr7_1:16917939-16917958 | None:intergenic | 45.0% | |
| TTTATAGGAAGGCTACCTCG+AGG | + | chr7_1:16918095-16918114 | None:intergenic | 45.0% | |
| ATGAAAAGGGAAGGCTGTCA+AGG | - | chr7_1:16918204-16918223 | Msa1011960:intron | 45.0% | |
| TGAAAAGGGAAGGCTGTCAA+GGG | - | chr7_1:16918205-16918224 | Msa1011960:intron | 45.0% | |
| ! | GCAGAGAAATATGACGGAGT+TGG | - | chr7_1:16916280-16916299 | Msa1011960:CDS | 45.0% |
| CACATGAGTATGTTGTGCCA+AGG | + | chr7_1:16916318-16916337 | None:intergenic | 45.0% | |
| GGCACAACATACTCATGTGT+TGG | - | chr7_1:16916319-16916338 | Msa1011960:CDS | 45.0% | |
| TCATGTGTTGGAGTATGGCA+GGG | - | chr7_1:16916331-16916350 | Msa1011960:CDS | 45.0% | |
| ! | GACAGTGTTTGTTGGGTTAG+AGG | + | chr7_1:16916473-16916492 | None:intergenic | 45.0% |
| !! | GGGACTACACAATGGGTTAA+AGG | + | chr7_1:16916606-16916625 | None:intergenic | 45.0% |
| ACGATGAGGGACTACACAAT+GGG | + | chr7_1:16916613-16916632 | None:intergenic | 45.0% | |
| TACGATGAGGGACTACACAA+TGG | + | chr7_1:16916614-16916633 | None:intergenic | 45.0% | |
| ! | GCAGATGCTAAGAGGTTGAT+TGG | - | chr7_1:16916889-16916908 | Msa1011960:CDS | 45.0% |
| !!! | TGGCCTTTTAAGGTCATTGC+CGG | - | chr7_1:16916955-16916974 | Msa1011960:CDS | 45.0% |
| !! | CGTTGGTTTGTCATTATCCC+CGG | + | chr7_1:16916977-16916996 | None:intergenic | 45.0% |
| !!! | AGAGATTGCAGGGGCATTTT+TGG | - | chr7_1:16917074-16917093 | Msa1011960:CDS | 45.0% |
| AGCAATATCACCCGCATCTT+TGG | + | chr7_1:16917166-16917185 | None:intergenic | 45.0% | |
| AAAGATGCGGGTGATATTGC+TGG | - | chr7_1:16917165-16917184 | Msa1011960:CDS | 45.0% | |
| AATCAATGAACCGACTGCAG+CGG | - | chr7_1:16917206-16917225 | Msa1011960:CDS | 45.0% | |
| ! | TTTGAAGTCAAGGCCACTTC+TGG | - | chr7_1:16917345-16917364 | Msa1011960:CDS | 45.0% |
| CTGCATGCGAAAAGGCAAAA+AGG | - | chr7_1:16917490-16917509 | Msa1011960:CDS | 45.0% | |
| GTAGATGACGTTGTCCTTGT+TGG | - | chr7_1:16917687-16917706 | Msa1011960:CDS | 45.0% | |
| TGCAGTAGCTGCTTCACTTT+GGG | + | chr7_1:16917729-16917748 | None:intergenic | 45.0% | |
| TCATGGATGTCGTGATTCCT+AGG | - | chr7_1:16917919-16917938 | Msa1011960:intron | 45.0% | |
| AAAGGGATGGATGTGTTCCT+AGG | + | chr7_1:16917939-16917958 | None:intergenic | 45.0% | |
| TTTATAGGAAGGCTACCTCG+AGG | + | chr7_1:16918095-16918114 | None:intergenic | 45.0% | |
| ATGAAAAGGGAAGGCTGTCA+AGG | - | chr7_1:16918204-16918223 | Msa1011960:intron | 45.0% | |
| TGAAAAGGGAAGGCTGTCAA+GGG | - | chr7_1:16918205-16918224 | Msa1011960:intron | 45.0% | |
| CTCATGTGTTGGAGTATGGC+AGG | - | chr7_1:16916330-16916349 | Msa1011960:CDS | 50.0% | |
| CATGTGTTGGAGTATGGCAG+GGG | - | chr7_1:16916332-16916351 | Msa1011960:CDS | 50.0% | |
| !!! | GGCCTTTTAAGGTCATTGCC+GGG | - | chr7_1:16916956-16916975 | Msa1011960:CDS | 50.0% |
| !!! | GCCTTTTAAGGTCATTGCCG+GGG | - | chr7_1:16916957-16916976 | Msa1011960:CDS | 50.0% |
| TCCCCGGCAATGACCTTAAA+AGG | + | chr7_1:16916961-16916980 | None:intergenic | 50.0% | |
| !!! | GATTGCAGGGGCATTTTTGG+AGG | - | chr7_1:16917077-16917096 | Msa1011960:CDS | 50.0% |
| GCGAAGAGCTACCAAAGATG+CGG | - | chr7_1:16917152-16917171 | Msa1011960:CDS | 50.0% | |
| CGAAGAGCTACCAAAGATGC+GGG | - | chr7_1:16917153-16917172 | Msa1011960:CDS | 50.0% | |
| ! | ACTTCTGGAGACACTCACCT+CGG | - | chr7_1:16917360-16917379 | Msa1011960:CDS | 50.0% |
| TATCAAAGTCCTCTCCTCCG+AGG | + | chr7_1:16917380-16917399 | None:intergenic | 50.0% | |
| GTGTGAACTCCAAAGCCCTA+AGG | - | chr7_1:16917457-16917476 | Msa1011960:CDS | 50.0% | |
| GATGACGTTGTCCTTGTTGG+TGG | - | chr7_1:16917690-16917709 | Msa1011960:CDS | 50.0% | |
| CTGCAGTAGCTGCTTCACTT+TGG | + | chr7_1:16917730-16917749 | None:intergenic | 50.0% | |
| CAAAGTGAAGCAGCTACTGC+AGG | - | chr7_1:16917728-16917747 | Msa1011960:CDS | 50.0% | |
| !! | CAAGAGCATTAACCCTGACG+AGG | - | chr7_1:16917776-16917795 | Msa1011960:CDS | 50.0% |
| CACAAGCAACAACCTCGTCA+GGG | + | chr7_1:16917791-16917810 | None:intergenic | 50.0% | |
| TGCTTGTGGAGCAGCTATTC+AGG | - | chr7_1:16917803-16917822 | Msa1011960:CDS | 50.0% | |
| TCTGCAGAGGAAGAATCCAG+CGG | - | chr7_1:16918155-16918174 | Msa1011960:intron | 50.0% | |
| CTCATGTGTTGGAGTATGGC+AGG | - | chr7_1:16916330-16916349 | Msa1011960:CDS | 50.0% | |
| CATGTGTTGGAGTATGGCAG+GGG | - | chr7_1:16916332-16916351 | Msa1011960:CDS | 50.0% | |
| !!! | GGCCTTTTAAGGTCATTGCC+GGG | - | chr7_1:16916956-16916975 | Msa1011960:CDS | 50.0% |
| !!! | GCCTTTTAAGGTCATTGCCG+GGG | - | chr7_1:16916957-16916976 | Msa1011960:CDS | 50.0% |
| TCCCCGGCAATGACCTTAAA+AGG | + | chr7_1:16916961-16916980 | None:intergenic | 50.0% | |
| !!! | GATTGCAGGGGCATTTTTGG+AGG | - | chr7_1:16917077-16917096 | Msa1011960:CDS | 50.0% |
| GCGAAGAGCTACCAAAGATG+CGG | - | chr7_1:16917152-16917171 | Msa1011960:CDS | 50.0% | |
| CGAAGAGCTACCAAAGATGC+GGG | - | chr7_1:16917153-16917172 | Msa1011960:CDS | 50.0% | |
| ! | ACTTCTGGAGACACTCACCT+CGG | - | chr7_1:16917360-16917379 | Msa1011960:CDS | 50.0% |
| TATCAAAGTCCTCTCCTCCG+AGG | + | chr7_1:16917380-16917399 | None:intergenic | 50.0% | |
| GTGTGAACTCCAAAGCCCTA+AGG | - | chr7_1:16917457-16917476 | Msa1011960:CDS | 50.0% | |
| GATGACGTTGTCCTTGTTGG+TGG | - | chr7_1:16917690-16917709 | Msa1011960:CDS | 50.0% | |
| CTGCAGTAGCTGCTTCACTT+TGG | + | chr7_1:16917730-16917749 | None:intergenic | 50.0% | |
| CAAAGTGAAGCAGCTACTGC+AGG | - | chr7_1:16917728-16917747 | Msa1011960:CDS | 50.0% | |
| !! | CAAGAGCATTAACCCTGACG+AGG | - | chr7_1:16917776-16917795 | Msa1011960:CDS | 50.0% |
| CACAAGCAACAACCTCGTCA+GGG | + | chr7_1:16917791-16917810 | None:intergenic | 50.0% | |
| TGCTTGTGGAGCAGCTATTC+AGG | - | chr7_1:16917803-16917822 | Msa1011960:CDS | 50.0% | |
| TCTGCAGAGGAAGAATCCAG+CGG | - | chr7_1:16918155-16918174 | Msa1011960:intron | 50.0% | |
| ACGCAGATGCGAGAGATTGC+AGG | - | chr7_1:16917063-16917082 | Msa1011960:CDS | 55.0% | |
| CGCAGATGCGAGAGATTGCA+GGG | - | chr7_1:16917064-16917083 | Msa1011960:CDS | 55.0% | |
| GCAGATGCGAGAGATTGCAG+GGG | - | chr7_1:16917065-16917084 | Msa1011960:CDS | 55.0% | |
| TATGCAAGAGCCGCTGCAGT+CGG | + | chr7_1:16917219-16917238 | None:intergenic | 55.0% | |
| ACTGCAGCGGCTCTTGCATA+TGG | - | chr7_1:16917219-16917238 | Msa1011960:CDS | 55.0% | |
| GAGGTGAGTGTCTCCAGAAG+TGG | + | chr7_1:16917361-16917380 | None:intergenic | 55.0% | |
| CCACAAGCAACAACCTCGTC+AGG | + | chr7_1:16917792-16917811 | None:intergenic | 55.0% | |
| ! | CCTGACGAGGTTGTTGCTTG+TGG | - | chr7_1:16917789-16917808 | Msa1011960:CDS | 55.0% |
| ! | CAGGCTGCTTTGCTGAGTGA+AGG | - | chr7_1:16917822-16917841 | Msa1011960:CDS | 55.0% |
| ACGCAGATGCGAGAGATTGC+AGG | - | chr7_1:16917063-16917082 | Msa1011960:CDS | 55.0% | |
| CGCAGATGCGAGAGATTGCA+GGG | - | chr7_1:16917064-16917083 | Msa1011960:CDS | 55.0% | |
| GCAGATGCGAGAGATTGCAG+GGG | - | chr7_1:16917065-16917084 | Msa1011960:CDS | 55.0% | |
| TATGCAAGAGCCGCTGCAGT+CGG | + | chr7_1:16917219-16917238 | None:intergenic | 55.0% | |
| ACTGCAGCGGCTCTTGCATA+TGG | - | chr7_1:16917219-16917238 | Msa1011960:CDS | 55.0% | |
| GAGGTGAGTGTCTCCAGAAG+TGG | + | chr7_1:16917361-16917380 | None:intergenic | 55.0% | |
| CCACAAGCAACAACCTCGTC+AGG | + | chr7_1:16917792-16917811 | None:intergenic | 55.0% | |
| ! | CCTGACGAGGTTGTTGCTTG+TGG | - | chr7_1:16917789-16917808 | Msa1011960:CDS | 55.0% |
| ! | CAGGCTGCTTTGCTGAGTGA+AGG | - | chr7_1:16917822-16917841 | Msa1011960:CDS | 55.0% |
| TCTGGAGACACTCACCTCGG+AGG | - | chr7_1:16917363-16917382 | Msa1011960:CDS | 60.0% | |
| AGACACTCACCTCGGAGGAG+AGG | - | chr7_1:16917368-16917387 | Msa1011960:CDS | 60.0% | |
| TCTGTTCCTCCTGCTCCTCG+AGG | - | chr7_1:16918077-16918096 | Msa1011960:intron | 60.0% | |
| TCTGGAGACACTCACCTCGG+AGG | - | chr7_1:16917363-16917382 | Msa1011960:CDS | 60.0% | |
| AGACACTCACCTCGGAGGAG+AGG | - | chr7_1:16917368-16917387 | Msa1011960:CDS | 60.0% | |
| TCTGTTCCTCCTGCTCCTCG+AGG | - | chr7_1:16918077-16918096 | Msa1011960:intron | 60.0% | |
| AGGCTACCTCGAGGAGCAGG+AGG | + | chr7_1:16918086-16918105 | None:intergenic | 65.0% | |
| GGAAGGCTACCTCGAGGAGC+AGG | + | chr7_1:16918089-16918108 | None:intergenic | 65.0% | |
| AGGCTACCTCGAGGAGCAGG+AGG | + | chr7_1:16918086-16918105 | None:intergenic | 65.0% | |
| GGAAGGCTACCTCGAGGAGC+AGG | + | chr7_1:16918089-16918108 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 16916277 | 16918532 | 16916277 | ID=Msa1011960;Name=Msa1011960 |
| chr7_1 | mRNA | 16916277 | 16918532 | 16916277 | ID=Msa1011960-mRNA-1;Parent=Msa1011960;Name=Msa1011960-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|619 |
| chr7_1 | exon | 16918313 | 16918532 | 16918313 | ID=Msa1011960-mRNA-1:exon:4253;Parent=Msa1011960-mRNA-1 |
| chr7_1 | exon | 16916277 | 16917916 | 16916277 | ID=Msa1011960-mRNA-1:exon:4252;Parent=Msa1011960-mRNA-1 |
| chr7_1 | CDS | 16918313 | 16918532 | 16918313 | ID=Msa1011960-mRNA-1:cds;Parent=Msa1011960-mRNA-1 |
| chr7_1 | CDS | 16916277 | 16917916 | 16916277 | ID=Msa1011960-mRNA-1:cds;Parent=Msa1011960-mRNA-1 |
| Gene Sequence |
| Protein sequence |
