Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012000 | GAU33112.1 | 82.708 | 613 | 105 | 1 | 1 | 613 | 9 | 620 | 0.0 | 1050 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012000 | sp|Q9LHA8|HS704_ARATH | 67.541 | 610 | 194 | 3 | 1 | 608 | 1 | 608 | 0.0 | 833 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012000 | A0A2Z6N8I6 | 82.708 | 613 | 105 | 1 | 1 | 613 | 9 | 620 | 0.0 | 1050 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa0104800 | Msa1012000 | 0.802615 | 5.158105e-49 | -8.615850e-47 |
| Msa0721280 | Msa1012000 | 0.804814 | 1.803445e-49 | -8.615850e-47 |
| Msa1011960 | Msa1012000 | 0.987726 | 2.600744e-171 | -8.615850e-47 |
| Msa1012000 | Msa1357890 | 0.801313 | 9.552139e-49 | -8.615850e-47 |
| Msa1012000 | Msa1398090 | 0.805157 | 1.528415e-49 | -8.615850e-47 |
| Msa0962840 | Msa1012000 | 0.813563 | 2.402176e-51 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012000 | MtrunA17_Chr7g0223621 | 80.291 | 619 | 121 | 1 | 1 | 619 | 1 | 618 | 0.0 | 1032 |
| Msa1012000 | MtrunA17_Chr7g0223711 | 78.514 | 619 | 133 | 0 | 1 | 619 | 1 | 619 | 0.0 | 1008 |
| Msa1012000 | MtrunA17_Chr8g0350731 | 79.445 | 613 | 125 | 1 | 1 | 613 | 29 | 640 | 0.0 | 998 |
| Msa1012000 | MtrunA17_Chr7g0223751 | 74.878 | 613 | 153 | 1 | 1 | 613 | 1 | 612 | 0.0 | 951 |
| Msa1012000 | MtrunA17_Chr7g0223701 | 74.074 | 621 | 151 | 4 | 1 | 612 | 1 | 620 | 0.0 | 932 |
| Msa1012000 | MtrunA17_Chr7g0223631 | 73.183 | 619 | 151 | 3 | 1 | 619 | 1 | 604 | 0.0 | 908 |
| Msa1012000 | MtrunA17_Chr7g0223741 | 73.401 | 594 | 158 | 0 | 1 | 594 | 1 | 594 | 0.0 | 907 |
| Msa1012000 | MtrunA17_Chr7g0223731 | 71.615 | 613 | 173 | 1 | 1 | 613 | 1 | 612 | 0.0 | 897 |
| Msa1012000 | MtrunA17_Chr7g0223031 | 70.636 | 613 | 179 | 1 | 1 | 613 | 1 | 612 | 0.0 | 892 |
| Msa1012000 | MtrunA17_Chr7g0248131 | 70.388 | 618 | 177 | 5 | 1 | 613 | 1 | 617 | 0.0 | 877 |
| Msa1012000 | MtrunA17_Chr7g0248151 | 68.669 | 616 | 189 | 3 | 1 | 613 | 1 | 615 | 0.0 | 848 |
| Msa1012000 | MtrunA17_Chr2g0293581 | 66.613 | 617 | 203 | 3 | 1 | 614 | 1 | 617 | 0.0 | 841 |
| Msa1012000 | MtrunA17_Chr7g0223781 | 67.427 | 614 | 196 | 3 | 1 | 613 | 1 | 611 | 0.0 | 840 |
| Msa1012000 | MtrunA17_Chr7g0223801 | 66.775 | 614 | 202 | 2 | 1 | 614 | 1 | 612 | 0.0 | 836 |
| Msa1012000 | MtrunA17_Chr7g0221661 | 66.343 | 618 | 206 | 2 | 1 | 617 | 1 | 617 | 0.0 | 827 |
| Msa1012000 | MtrunA17_Chr7g0223181 | 66.721 | 610 | 199 | 3 | 1 | 608 | 1 | 608 | 0.0 | 826 |
| Msa1012000 | MtrunA17_Chr5g0427901 | 65.120 | 625 | 205 | 3 | 1 | 613 | 1 | 624 | 0.0 | 826 |
| Msa1012000 | MtrunA17_Chr7g0223721 | 66.016 | 615 | 206 | 3 | 1 | 613 | 1 | 614 | 0.0 | 825 |
| Msa1012000 | MtrunA17_Chr4g0031321 | 66.557 | 610 | 200 | 3 | 1 | 608 | 1 | 608 | 0.0 | 824 |
| Msa1012000 | MtrunA17_Chr7g0223541 | 73.704 | 540 | 142 | 0 | 74 | 613 | 31 | 570 | 0.0 | 823 |
| Msa1012000 | MtrunA17_Chr4g0031301 | 66.393 | 610 | 201 | 3 | 1 | 608 | 1 | 608 | 0.0 | 822 |
| Msa1012000 | MtrunA17_Chr7g0262821 | 66.066 | 610 | 203 | 3 | 1 | 608 | 1 | 608 | 0.0 | 821 |
| Msa1012000 | MtrunA17_Chr7g0223291 | 66.230 | 610 | 202 | 3 | 1 | 608 | 1 | 608 | 0.0 | 820 |
| Msa1012000 | MtrunA17_Chr2g0298851 | 65.630 | 611 | 205 | 5 | 1 | 608 | 1 | 609 | 0.0 | 816 |
| Msa1012000 | MtrunA17_Chr2g0298861 | 64.952 | 622 | 203 | 5 | 1 | 608 | 1 | 621 | 0.0 | 814 |
| Msa1012000 | MtrunA17_Chr4g0040931 | 64.426 | 610 | 214 | 3 | 1 | 608 | 1 | 609 | 0.0 | 803 |
| Msa1012000 | MtrunA17_Chr2g0287631 | 65.422 | 616 | 211 | 2 | 1 | 614 | 1 | 616 | 0.0 | 802 |
| Msa1012000 | MtrunA17_Chr7g0233311 | 63.799 | 616 | 221 | 2 | 1 | 614 | 1 | 616 | 0.0 | 801 |
| Msa1012000 | MtrunA17_Chr4g0073741 | 64.754 | 610 | 210 | 4 | 1 | 608 | 1 | 607 | 0.0 | 801 |
| Msa1012000 | MtrunA17_Chr7g0223851 | 62.742 | 620 | 228 | 3 | 1 | 618 | 10 | 628 | 0.0 | 794 |
| Msa1012000 | MtrunA17_Chr7g0225671 | 62.908 | 612 | 223 | 4 | 9 | 618 | 16 | 625 | 0.0 | 785 |
| Msa1012000 | MtrunA17_Chr7g0223681 | 74.379 | 523 | 133 | 1 | 91 | 613 | 2 | 523 | 0.0 | 781 |
| Msa1012000 | MtrunA17_Chr7g0217971 | 63.545 | 598 | 193 | 2 | 1 | 598 | 1 | 573 | 0.0 | 771 |
| Msa1012000 | MtrunA17_Chr2g0296391 | 67.547 | 530 | 171 | 1 | 1 | 529 | 1 | 530 | 0.0 | 751 |
| Msa1012000 | MtrunA17_Chr7g0223821 | 60.586 | 614 | 234 | 4 | 1 | 608 | 1 | 612 | 0.0 | 737 |
| Msa1012000 | MtrunA17_Chr4g0012541 | 59.516 | 620 | 239 | 4 | 1 | 618 | 1 | 610 | 0.0 | 737 |
| Msa1012000 | MtrunA17_Chr8g0390821 | 57.421 | 667 | 214 | 8 | 1 | 613 | 1 | 651 | 0.0 | 733 |
| Msa1012000 | MtrunA17_Chr7g0233301 | 59.253 | 616 | 218 | 3 | 1 | 614 | 1 | 585 | 0.0 | 729 |
| Msa1012000 | MtrunA17_Chr7g0223831 | 59.380 | 613 | 216 | 6 | 1 | 610 | 1 | 583 | 0.0 | 706 |
| Msa1012000 | MtrunA17_Chr2g0293601 | 66.409 | 518 | 139 | 2 | 1 | 517 | 1 | 484 | 0.0 | 697 |
| Msa1012000 | MtrunA17_Chr7g0228281 | 57.258 | 620 | 217 | 6 | 1 | 618 | 62 | 635 | 0.0 | 697 |
| Msa1012000 | MtrunA17_Chr6g0462601 | 59.083 | 589 | 238 | 2 | 1 | 588 | 1 | 587 | 0.0 | 696 |
| Msa1012000 | MtrunA17_Chr7g0215261 | 57.980 | 614 | 218 | 6 | 1 | 610 | 1 | 578 | 0.0 | 694 |
| Msa1012000 | MtrunA17_Chr6g0462681 | 56.866 | 619 | 264 | 2 | 1 | 618 | 1 | 617 | 0.0 | 689 |
| Msa1012000 | MtrunA17_Chr6g0462711 | 57.956 | 597 | 244 | 3 | 8 | 598 | 9 | 604 | 0.0 | 674 |
| Msa1012000 | MtrunA17_Chr2g0331381 | 60.595 | 538 | 150 | 4 | 10 | 547 | 7 | 482 | 0.0 | 652 |
| Msa1012000 | MtrunA17_Chr6g0462771 | 57.877 | 584 | 235 | 4 | 8 | 582 | 8 | 589 | 0.0 | 649 |
| Msa1012000 | MtrunA17_Chr6g0462641 | 56.514 | 591 | 246 | 4 | 1 | 582 | 1 | 589 | 0.0 | 648 |
| Msa1012000 | MtrunA17_Chr2g0284681 | 57.321 | 560 | 229 | 5 | 9 | 560 | 8 | 565 | 0.0 | 640 |
| Msa1012000 | MtrunA17_Chr8g0388761 | 52.730 | 586 | 267 | 7 | 7 | 588 | 36 | 615 | 0.0 | 612 |
| Msa1012000 | MtrunA17_Chr8g0388671 | 52.901 | 586 | 266 | 7 | 7 | 588 | 36 | 615 | 0.0 | 610 |
| Msa1012000 | MtrunA17_Chr2g0293561 | 73.797 | 374 | 98 | 0 | 1 | 374 | 1 | 374 | 0.0 | 593 |
| Msa1012000 | MtrunA17_Chr1g0166551 | 51.736 | 605 | 178 | 5 | 9 | 611 | 5 | 497 | 0.0 | 584 |
| Msa1012000 | MtrunA17_Chr6g0462611 | 54.862 | 545 | 245 | 1 | 74 | 618 | 22 | 565 | 0.0 | 578 |
| Msa1012000 | MtrunA17_Chr2g0299791 | 68.895 | 389 | 117 | 2 | 1 | 389 | 1034 | 1418 | 0.0 | 550 |
| Msa1012000 | MtrunA17_Chr2g0299821 | 59.292 | 452 | 167 | 4 | 1 | 437 | 1 | 450 | 0.0 | 528 |
| Msa1012000 | MtrunA17_Chr2g0299821 | 48.454 | 97 | 40 | 3 | 451 | 539 | 390 | 484 | 8.24e-18 | 86.7 |
| Msa1012000 | MtrunA17_Chr2g0299921 | 67.342 | 395 | 125 | 2 | 2 | 396 | 1022 | 1412 | 1.33e-177 | 549 |
| Msa1012000 | MtrunA17_Chr2g0299921 | 66.667 | 390 | 125 | 3 | 2 | 390 | 1406 | 1791 | 2.70e-165 | 516 |
| Msa1012000 | MtrunA17_Chr2g0299851 | 66.667 | 390 | 126 | 2 | 1 | 390 | 1030 | 1415 | 1.60e-177 | 541 |
| Msa1012000 | MtrunA17_Chr2g0293271 | 57.666 | 437 | 115 | 3 | 21 | 457 | 43 | 409 | 6.95e-169 | 487 |
| Msa1012000 | MtrunA17_Chr2g0299881 | 67.188 | 384 | 118 | 3 | 10 | 389 | 1039 | 1418 | 3.07e-168 | 518 |
| Msa1012000 | MtrunA17_Chr2g0299881 | 62.687 | 67 | 25 | 0 | 184 | 250 | 1409 | 1475 | 1.98e-18 | 90.1 |
| Msa1012000 | MtrunA17_Chr6g0462861 | 46.907 | 582 | 278 | 8 | 9 | 580 | 9 | 569 | 2.86e-167 | 492 |
| Msa1012000 | MtrunA17_Chr2g0279901 | 44.891 | 597 | 304 | 12 | 10 | 600 | 57 | 634 | 6.39e-163 | 481 |
| Msa1012000 | MtrunA17_Chr4g0049501 | 43.719 | 597 | 312 | 11 | 10 | 600 | 54 | 632 | 3.80e-160 | 474 |
| Msa1012000 | MtrunA17_Chr2g0277021 | 44.670 | 591 | 294 | 12 | 10 | 589 | 72 | 640 | 1.65e-152 | 456 |
| Msa1012000 | MtrunA17_Chr1g0151991 | 69.416 | 291 | 89 | 0 | 1 | 291 | 1 | 291 | 5.01e-149 | 432 |
| Msa1012000 | MtrunA17_Chr7g0245521 | 72.894 | 273 | 74 | 0 | 1 | 273 | 1 | 273 | 2.73e-146 | 424 |
| Msa1012000 | MtrunA17_Chr7g0223761 | 52.419 | 372 | 133 | 4 | 241 | 610 | 3 | 332 | 2.22e-121 | 363 |
| Msa1012000 | MtrunA17_Chr7g0245531 | 59.164 | 311 | 125 | 2 | 305 | 614 | 2 | 311 | 1.42e-119 | 357 |
| Msa1012000 | MtrunA17_Chr7g0223671 | 86.170 | 188 | 26 | 0 | 74 | 261 | 8 | 195 | 3.57e-119 | 352 |
| Msa1012000 | MtrunA17_Chr1g0152001 | 56.566 | 297 | 126 | 3 | 315 | 610 | 1 | 295 | 5.64e-107 | 325 |
| Msa1012000 | MtrunA17_Chr1g0188601 | 75.393 | 191 | 47 | 0 | 92 | 282 | 1 | 191 | 4.45e-100 | 303 |
| Msa1012000 | MtrunA17_Chr6g0462631 | 49.850 | 333 | 118 | 5 | 88 | 416 | 10 | 297 | 4.50e-97 | 299 |
| Msa1012000 | MtrunA17_Chr6g0462751 | 46.839 | 348 | 125 | 4 | 67 | 411 | 12 | 302 | 5.70e-93 | 289 |
| Msa1012000 | MtrunA17_Chr1g0188611 | 54.422 | 294 | 126 | 2 | 322 | 614 | 1 | 287 | 9.93e-88 | 274 |
| Msa1012000 | MtrunA17_Chr5g0394391 | 34.394 | 503 | 305 | 11 | 8 | 494 | 28 | 521 | 3.07e-82 | 269 |
| Msa1012000 | MtrunA17_Chr7g0223771 | 72.549 | 153 | 42 | 0 | 93 | 245 | 1 | 153 | 1.15e-75 | 238 |
| Msa1012000 | MtrunA17_Chr2g0331901 | 33.696 | 460 | 276 | 9 | 10 | 451 | 4 | 452 | 3.05e-75 | 257 |
| Msa1012000 | MtrunA17_Chr4g0004331 | 34.240 | 441 | 271 | 7 | 10 | 436 | 4 | 439 | 5.75e-73 | 251 |
| Msa1012000 | MtrunA17_Chr6g0462791 | 62.921 | 178 | 65 | 1 | 109 | 286 | 2 | 178 | 5.20e-72 | 229 |
| Msa1012000 | MtrunA17_Chr4g0046881 | 72.603 | 146 | 37 | 1 | 130 | 275 | 9 | 151 | 3.50e-69 | 221 |
| Msa1012000 | MtrunA17_Chr5g0444001 | 31.633 | 490 | 291 | 10 | 10 | 486 | 4 | 462 | 1.16e-68 | 233 |
| Msa1012000 | MtrunA17_Chr3g0098761 | 27.560 | 664 | 401 | 15 | 10 | 608 | 4 | 652 | 5.89e-67 | 233 |
| Msa1012000 | MtrunA17_Chr3g0120101 | 29.828 | 523 | 320 | 14 | 10 | 494 | 27 | 540 | 4.01e-60 | 215 |
| Msa1012000 | MtrunA17_Chr7g0223861 | 70.229 | 131 | 39 | 0 | 78 | 208 | 4 | 134 | 7.83e-59 | 193 |
| Msa1012000 | MtrunA17_Chr4g0064621 | 32.164 | 513 | 316 | 14 | 8 | 496 | 139 | 643 | 4.17e-58 | 207 |
| Msa1012000 | MtrunA17_Chr6g0462701 | 50.820 | 183 | 66 | 1 | 88 | 270 | 10 | 168 | 2.96e-52 | 177 |
| Msa1012000 | MtrunA17_Chr5g0394221 | 40.068 | 292 | 165 | 6 | 291 | 580 | 61 | 344 | 7.64e-50 | 177 |
| Msa1012000 | MtrunA17_Chr4g0060241 | 28.711 | 512 | 318 | 17 | 8 | 496 | 19 | 506 | 1.12e-49 | 181 |
| Msa1012000 | MtrunA17_Chr5g0442171 | 34.639 | 332 | 190 | 9 | 170 | 487 | 1 | 319 | 5.91e-48 | 171 |
| Msa1012000 | MtrunA17_Chr7g0245541 | 47.692 | 195 | 100 | 2 | 417 | 610 | 1 | 194 | 6.39e-48 | 166 |
| Msa1012000 | MtrunA17_Chr5g0394231 | 39.648 | 227 | 86 | 4 | 74 | 299 | 5 | 181 | 2.10e-46 | 162 |
| Msa1012000 | MtrunA17_Chr6g0481391 | 63.934 | 122 | 41 | 1 | 38 | 159 | 13 | 131 | 8.99e-46 | 158 |
| Msa1012000 | MtrunA17_Chr4g0046871 | 72.549 | 102 | 28 | 0 | 336 | 437 | 6 | 107 | 1.82e-45 | 156 |
| Msa1012000 | MtrunA17_Chr6g0462691 | 53.521 | 142 | 65 | 1 | 322 | 462 | 1 | 142 | 1.03e-41 | 148 |
| Msa1012000 | MtrunA17_Chr7g0223691 | 86.301 | 73 | 10 | 0 | 1 | 73 | 1 | 73 | 1.62e-39 | 139 |
| Msa1012000 | MtrunA17_Chr1g0188591 | 72.603 | 73 | 20 | 0 | 1 | 73 | 1 | 73 | 1.70e-30 | 114 |
| Msa1012000 | MtrunA17_Chr6g0481381 | 71.622 | 74 | 21 | 0 | 176 | 249 | 1 | 74 | 7.62e-30 | 116 |
| Msa1012000 | MtrunA17_Chr6g0481381 | 37.895 | 95 | 58 | 1 | 515 | 608 | 75 | 169 | 6.04e-11 | 62.0 |
| Msa1012000 | MtrunA17_Chr6g0462621 | 72.603 | 73 | 18 | 1 | 1 | 73 | 1 | 71 | 1.01e-28 | 109 |
| Msa1012000 | MtrunA17_Chr7g0223791 | 70.370 | 81 | 16 | 3 | 56 | 136 | 18 | 90 | 2.92e-27 | 108 |
| Msa1012000 | MtrunA17_Chr7g0223791 | 41.758 | 91 | 53 | 0 | 483 | 573 | 91 | 181 | 1.10e-16 | 78.6 |
| Msa1012000 | MtrunA17_Chr7g0223661 | 46.552 | 116 | 19 | 1 | 315 | 430 | 1 | 73 | 3.69e-25 | 99.4 |
| Msa1012000 | MtrunA17_Chr7g0221651 | 50.000 | 84 | 42 | 0 | 215 | 298 | 1 | 84 | 9.95e-24 | 95.5 |
| Msa1012000 | MtrunA17_Chr7g0223881 | 54.878 | 82 | 36 | 1 | 281 | 362 | 2 | 82 | 1.75e-22 | 92.0 |
| Msa1012000 | MtrunA17_Chr7g0223871 | 41.085 | 129 | 75 | 1 | 491 | 618 | 7 | 135 | 2.35e-19 | 84.7 |
| Msa1012000 | MtrunA17_Chr2g0284661 | 55.422 | 83 | 36 | 1 | 368 | 449 | 61 | 143 | 3.71e-17 | 78.6 |
| Msa1012000 | MtrunA17_Chr2g0284661 | 49.180 | 61 | 29 | 1 | 225 | 283 | 5 | 65 | 3.61e-11 | 61.6 |
| Msa1012000 | MtrunA17_Chr6g0462801 | 60.606 | 66 | 21 | 1 | 322 | 382 | 1 | 66 | 2.35e-16 | 74.3 |
| Msa1012000 | MtrunA17_Chr2g0299891 | 76.744 | 43 | 10 | 0 | 315 | 357 | 1 | 43 | 2.45e-16 | 73.9 |
| Msa1012000 | MtrunA17_Chr4g0064651 | 38.947 | 95 | 55 | 2 | 397 | 490 | 29 | 121 | 7.24e-14 | 68.6 |
| Msa1012000 | MtrunA17_Chr2g0299941 | 54.688 | 64 | 27 | 1 | 390 | 453 | 16 | 77 | 1.58e-11 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1012000 | AT3G12580.1 | 67.541 | 610 | 194 | 3 | 1 | 608 | 1 | 608 | 0.0 | 833 |
| Msa1012000 | AT5G02500.1 | 66.393 | 610 | 201 | 3 | 1 | 608 | 1 | 608 | 0.0 | 826 |
| Msa1012000 | AT5G02490.1 | 65.082 | 610 | 209 | 3 | 1 | 608 | 1 | 608 | 0.0 | 811 |
| Msa1012000 | AT3G09440.1 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1012000 | AT3G09440.4 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1012000 | AT3G09440.2 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1012000 | AT3G09440.3 | 65.902 | 610 | 204 | 3 | 1 | 608 | 1 | 608 | 0.0 | 810 |
| Msa1012000 | AT1G56410.1 | 64.065 | 615 | 215 | 4 | 1 | 613 | 1 | 611 | 0.0 | 794 |
| Msa1012000 | AT1G16030.1 | 63.561 | 601 | 215 | 3 | 10 | 608 | 9 | 607 | 0.0 | 786 |
| Msa1012000 | AT5G28540.1 | 53.135 | 606 | 274 | 7 | 7 | 608 | 35 | 634 | 0.0 | 627 |
| Msa1012000 | AT5G42020.1 | 53.135 | 606 | 274 | 7 | 7 | 608 | 35 | 634 | 0.0 | 626 |
| Msa1012000 | AT5G42020.3 | 53.135 | 606 | 274 | 7 | 7 | 608 | 40 | 639 | 0.0 | 626 |
| Msa1012000 | AT5G02500.2 | 74.036 | 389 | 99 | 1 | 1 | 389 | 1 | 387 | 0.0 | 605 |
| Msa1012000 | AT5G02500.2 | 43.011 | 93 | 53 | 0 | 516 | 608 | 386 | 478 | 2.30e-14 | 76.6 |
| Msa1012000 | AT1G09080.2 | 52.295 | 610 | 282 | 6 | 7 | 613 | 40 | 643 | 0.0 | 605 |
| Msa1012000 | AT1G09080.1 | 52.295 | 610 | 282 | 6 | 7 | 613 | 50 | 653 | 0.0 | 604 |
| Msa1012000 | AT5G42020.2 | 56.133 | 481 | 202 | 6 | 7 | 484 | 35 | 509 | 0.0 | 530 |
| Msa1012000 | AT5G09590.1 | 46.043 | 556 | 278 | 9 | 10 | 559 | 60 | 599 | 1.83e-157 | 468 |
| Msa1012000 | AT4G37910.1 | 44.389 | 597 | 308 | 11 | 10 | 600 | 55 | 633 | 1.80e-155 | 463 |
| Msa1012000 | AT4G37910.2 | 44.389 | 597 | 308 | 11 | 10 | 600 | 55 | 633 | 1.80e-155 | 463 |
| Msa1012000 | AT5G49910.1 | 43.087 | 622 | 320 | 13 | 10 | 619 | 81 | 680 | 1.98e-153 | 459 |
| Msa1012000 | AT4G24280.1 | 43.186 | 609 | 322 | 12 | 10 | 611 | 81 | 672 | 1.15e-152 | 457 |
| Msa1012000 | AT1G11660.4 | 28.723 | 658 | 394 | 13 | 10 | 608 | 4 | 645 | 6.18e-78 | 263 |
| Msa1012000 | AT1G11660.3 | 28.723 | 658 | 394 | 13 | 10 | 608 | 4 | 645 | 6.18e-78 | 263 |
| Msa1012000 | AT1G11660.1 | 28.723 | 658 | 394 | 13 | 10 | 608 | 4 | 645 | 6.18e-78 | 263 |
| Msa1012000 | AT1G79930.2 | 31.138 | 501 | 323 | 8 | 10 | 496 | 4 | 496 | 1.24e-74 | 254 |
| Msa1012000 | AT1G79920.1 | 31.275 | 502 | 321 | 9 | 10 | 496 | 4 | 496 | 2.47e-74 | 253 |
| Msa1012000 | AT1G79920.3 | 32.892 | 453 | 283 | 7 | 10 | 448 | 4 | 449 | 2.85e-74 | 252 |
| Msa1012000 | AT1G79920.2 | 32.892 | 453 | 283 | 7 | 10 | 448 | 4 | 449 | 2.85e-74 | 252 |
| Msa1012000 | AT1G79920.4 | 32.892 | 453 | 283 | 7 | 10 | 448 | 4 | 449 | 2.85e-74 | 252 |
| Msa1012000 | AT1G79930.1 | 32.743 | 452 | 285 | 6 | 10 | 448 | 4 | 449 | 3.44e-74 | 254 |
| Msa1012000 | AT1G11660.2 | 29.147 | 621 | 367 | 12 | 47 | 608 | 2 | 608 | 5.19e-72 | 246 |
| Msa1012000 | AT2G32120.1 | 31.054 | 541 | 337 | 13 | 8 | 532 | 29 | 549 | 1.30e-69 | 236 |
| Msa1012000 | AT2G32120.2 | 31.054 | 541 | 337 | 13 | 8 | 532 | 29 | 549 | 1.30e-69 | 236 |
| Msa1012000 | AT4G16660.1 | 27.639 | 521 | 333 | 12 | 10 | 494 | 27 | 539 | 3.90e-57 | 207 |
| Msa1012000 | AT4G16660.2 | 28.215 | 521 | 330 | 13 | 10 | 494 | 51 | 563 | 6.94e-57 | 207 |
Find 110 sgRNAs with CRISPR-Local
Find 312 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCACTTGGTTTAGAAATAAA+TGG | 0.223614 | 7_1:-17010464 | Msa1012000:CDS |
| CCAATGCAGTGTCGATATTA+AGG | 0.237028 | 7_1:-17010360 | Msa1012000:CDS |
| TTTGAAGTCAAGGCCACTTC+TGG | 0.262714 | 7_1:-17011010 | Msa1012000:CDS |
| TCCCCGGCAATGACCTTAAA+AGG | 0.263097 | 7_1:+17011397 | None:intergenic |
| TGCTTGTGGAGCAGCTATTC+AGG | 0.282392 | 7_1:-17010552 | Msa1012000:CDS |
| TGCAGTAGCTGCTTCACTTT+GGG | 0.288059 | 7_1:+17010629 | None:intergenic |
| TTTCAATCTCCTTAGGGCTT+TGG | 0.301647 | 7_1:+17010889 | None:intergenic |
| AGCAATATCACCCGCATCTT+TGG | 0.303757 | 7_1:+17011192 | None:intergenic |
| GACAGTGTTTGTTGGGTTAG+AGG | 0.330273 | 7_1:+17011885 | None:intergenic |
| AACCCAACAAACACTGTCTT+TGG | 0.342536 | 7_1:-17011880 | Msa1012000:intron |
| CATACTCATGTGTTGGAGTA+TGG | 0.356134 | 7_1:-17012029 | Msa1012000:CDS |
| CTGCATGCGAAAAGGCAAAA+AGG | 0.362492 | 7_1:-17010865 | Msa1012000:CDS |
| ACTAATTCTCAAAGATTGAT+TGG | 0.363747 | 7_1:-17011931 | Msa1012000:CDS |
| AAATGTGAATATTTGCTTGA+TGG | 0.387306 | 7_1:-17009939 | Msa1012000:CDS |
| TGTCGATATTAAGGTTTATG+AGG | 0.393803 | 7_1:-17010351 | Msa1012000:CDS |
| GAGCATCTCTGAATCTACTT+TGG | 0.401167 | 7_1:-17009865 | Msa1012000:CDS |
| AGAAAGAATAAAGTGGATAT+TGG | 0.401372 | 7_1:-17010920 | Msa1012000:CDS |
| GCAGATGCTAAGAGGTTGAT+TGG | 0.405669 | 7_1:-17011466 | Msa1012000:intron |
| TGAGGAAAGCTATGAAGAAT+AGG | 0.409437 | 7_1:-17010019 | Msa1012000:CDS |
| TACCAAAGACAGTGTTTGTT+GGG | 0.412258 | 7_1:+17011878 | None:intergenic |
| ACATCTCGCAGAATCAAGTT+TGG | 0.413190 | 7_1:+17010497 | None:intergenic |
| CCACAAGCAACAACCTCGTC+AGG | 0.417206 | 7_1:+17010566 | None:intergenic |
| CATGTTAAGTTGCTCAAACT+TGG | 0.419674 | 7_1:+17010760 | None:intergenic |
| AAAGATGCGGGTGATATTGC+TGG | 0.420636 | 7_1:-17011190 | Msa1012000:CDS |
| AGCATCTCTGAATCTACTTT+GGG | 0.421845 | 7_1:-17009864 | Msa1012000:CDS |
| CTCATGTGTTGGAGTATGGC+AGG | 0.423477 | 7_1:-17012025 | Msa1012000:CDS |
| ACTGCAGCGGCTCTTGCATA+TGG | 0.423883 | 7_1:-17011136 | Msa1012000:CDS |
| AAATATGACGGAGTTGGTAT+AGG | 0.426037 | 7_1:-17012069 | Msa1012000:CDS |
| ACGCAGATGCGAGAGATTGC+AGG | 0.427220 | 7_1:-17011292 | Msa1012000:CDS |
| CTGCAGTAGCTGCTTCACTT+TGG | 0.436479 | 7_1:+17010628 | None:intergenic |
| AGCCAGTGATAATAACTTGC+TGG | 0.437095 | 7_1:-17010315 | Msa1012000:CDS |
| GTAGATGACGTTGTCCTTGT+TGG | 0.450093 | 7_1:-17010668 | Msa1012000:CDS |
| TATTACAATAACGAATGAAA+AGG | 0.463859 | 7_1:-17010165 | Msa1012000:CDS |
| TCATGGATGTCGTGATTCCT+AGG | 0.475972 | 7_1:-17010436 | Msa1012000:CDS |
| CGTTGGTTTGTCATTATCCC+CGG | 0.482591 | 7_1:+17011381 | None:intergenic |
| AGAAATAAATGGAGATCTCA+TGG | 0.486339 | 7_1:-17010453 | Msa1012000:CDS |
| AAAGGGATGGATGTGTTCCT+AGG | 0.489586 | 7_1:+17010419 | None:intergenic |
| GGAAGAAACCAATGTGTTTG+TGG | 0.491041 | 7_1:-17009907 | Msa1012000:CDS |
| GGACCTCTTTGAAAAGTGTA+TGG | 0.494403 | 7_1:-17010738 | Msa1012000:CDS |
| GGAAGGCTACCTCGAGGAGC+AGG | 0.495837 | 7_1:+17010269 | None:intergenic |
| GAAATAATTCACAATGATCA+AGG | 0.498950 | 7_1:-17011985 | Msa1012000:CDS |
| AGTTAATGCAGTTAATGCAT+TGG | 0.500050 | 7_1:-17010060 | Msa1012000:CDS |
| CGCAGATGCGAGAGATTGCA+GGG | 0.503178 | 7_1:-17011291 | Msa1012000:CDS |
| ATTGAAAACTGCATGCGAAA+AGG | 0.506576 | 7_1:-17010873 | Msa1012000:CDS |
| CCTTAATATCGACACTGCAT+TGG | 0.513687 | 7_1:+17010360 | None:intergenic |
| TGTGAATCATTAAAATAAGA+AGG | 0.515012 | 7_1:+17011226 | None:intergenic |
| ATTACAATAACGAATGAAAA+GGG | 0.518757 | 7_1:-17010164 | Msa1012000:CDS |
| GCCAGTGATAATAACTTGCT+GGG | 0.520732 | 7_1:-17010314 | Msa1012000:CDS |
| TAATGCAGTTAATGCATTGG+AGG | 0.520943 | 7_1:-17010057 | Msa1012000:CDS |
| CCTGACGAGGTTGTTGCTTG+TGG | 0.521258 | 7_1:-17010566 | Msa1012000:CDS |
| ATTTAAGAGAAAGAATAAAG+TGG | 0.521504 | 7_1:-17010927 | Msa1012000:CDS |
| TTGCATTGCTGATGCTAAGA+TGG | 0.521754 | 7_1:-17010702 | Msa1012000:CDS |
| TTTGCTTGATGGTGACAAGA+AGG | 0.525967 | 7_1:-17009928 | Msa1012000:CDS |
| AAATAATGTCTTTGAAGTCA+AGG | 0.528245 | 7_1:-17011020 | Msa1012000:CDS |
| TGTGTTTGTGGACATGTTGA+AGG | 0.529361 | 7_1:-17009895 | Msa1012000:CDS |
| GAGCTAATTGTGTTGAAGAG+AGG | 0.530891 | 7_1:-17011102 | Msa1012000:CDS |
| CAAAGTGAAGCAGCTACTGC+AGG | 0.533801 | 7_1:-17010627 | Msa1012000:CDS |
| AACGATTGTTGTCAACTACA+AGG | 0.537929 | 7_1:-17011362 | Msa1012000:CDS |
| ACCCAGCAAGTTATTATCAC+TGG | 0.544741 | 7_1:+17010313 | None:intergenic |
| TTACCAAAGACAGTGTTTGT+TGG | 0.544855 | 7_1:+17011877 | None:intergenic |
| ATGAAAAGGGAAGGCTGTCA+AGG | 0.545587 | 7_1:-17010151 | Msa1012000:CDS |
| GATGACGTTGTCCTTGTTGG+TGG | 0.546302 | 7_1:-17010665 | Msa1012000:CDS |
| TTAGTAAAAGCAACACAAGA+AGG | 0.546731 | 7_1:+17011949 | None:intergenic |
| GTCGATATTAAGGTTTATGA+GGG | 0.551262 | 7_1:-17010350 | Msa1012000:CDS |
| CAACATGTCCACAAACACAT+TGG | 0.554939 | 7_1:+17009899 | None:intergenic |
| CAGGCTGCTTTGCTGAGTGA+AGG | 0.555191 | 7_1:-17010533 | Msa1012000:CDS |
| CTCAAAATGATATTATATTG+TGG | 0.556273 | 7_1:-17011420 | Msa1012000:CDS |
| ATGCTAAGAGGTTGATTGGA+AGG | 0.557766 | 7_1:-17011462 | Msa1012000:CDS |
| GCAGAGAAATATGACGGAGT+TGG | 0.558542 | 7_1:-17012075 | Msa1012000:CDS |
| CGAAGAGCTACCAAAGATGC+GGG | 0.562724 | 7_1:-17011202 | Msa1012000:CDS |
| GATGTCACTTCATTGTCACT+TGG | 0.563083 | 7_1:-17010479 | Msa1012000:CDS |
| GACATAGATGTTATATGTGA+GGG | 0.567287 | 7_1:-17010812 | Msa1012000:CDS |
| AGGACTATCTTTACAATGTG+AGG | 0.577804 | 7_1:-17010037 | Msa1012000:CDS |
| TATAACATCTATGTCAATTG+TGG | 0.581059 | 7_1:+17010820 | None:intergenic |
| GGCACAACATACTCATGTGT+TGG | 0.583777 | 7_1:-17012036 | Msa1012000:CDS |
| CAAGTTTGAGCAACTTAACA+TGG | 0.584531 | 7_1:-17010759 | Msa1012000:CDS |
| TATGCAAGAGCCGCTGCAGT+CGG | 0.586912 | 7_1:+17011139 | None:intergenic |
| TCATGTGTTGGAGTATGGCA+GGG | 0.588716 | 7_1:-17012024 | Msa1012000:CDS |
| GAGGTGAGTGTCTCCAGAAG+TGG | 0.591955 | 7_1:+17010997 | None:intergenic |
| GTGTGAACTCCAAAGCCCTA+AGG | 0.595455 | 7_1:-17010898 | Msa1012000:CDS |
| TGACATAGATGTTATATGTG+AGG | 0.601635 | 7_1:-17010813 | Msa1012000:CDS |
| CATGTGTTGGAGTATGGCAG+GGG | 0.603714 | 7_1:-17012023 | Msa1012000:CDS |
| TGAAAAGGGAAGGCTGTCAA+GGG | 0.609208 | 7_1:-17010150 | Msa1012000:CDS |
| CAATAACGAATGAAAAGGGA+AGG | 0.616163 | 7_1:-17010160 | Msa1012000:CDS |
| AGGCTACCTCGAGGAGCAGG+AGG | 0.617156 | 7_1:+17010272 | None:intergenic |
| AGACACTCACCTCGGAGGAG+AGG | 0.619985 | 7_1:-17010987 | Msa1012000:CDS |
| CACATGAGTATGTTGTGCCA+AGG | 0.622899 | 7_1:+17012040 | None:intergenic |
| AAAAGCAACACAAGAAGGAG+TGG | 0.623125 | 7_1:+17011954 | None:intergenic |
| AGAGGACTTTGATAATCGAA+TGG | 0.626059 | 7_1:-17010969 | Msa1012000:CDS |
| GCGAAGAGCTACCAAAGATG+CGG | 0.633114 | 7_1:-17011203 | Msa1012000:CDS |
| GTTGGTATAGGAATTGACCT+TGG | 0.634186 | 7_1:-17012057 | Msa1012000:CDS |
| TATATTAAACGTCTCTGCAG+AGG | 0.643649 | 7_1:-17010213 | Msa1012000:CDS |
| TCTGTTCCTCCTGCTCCTCG+AGG | 0.645355 | 7_1:-17010278 | Msa1012000:CDS |
| CACAAGCAACAACCTCGTCA+GGG | 0.645372 | 7_1:+17010567 | None:intergenic |
| AGAATGGCAGAGAAATATGA+CGG | 0.645453 | 7_1:-17012081 | Msa1012000:CDS |
| TTGTAGTTGACAACAATCGT+TGG | 0.646959 | 7_1:+17011364 | None:intergenic |
| AATCAATGAACCGACTGCAG+CGG | 0.648971 | 7_1:-17011149 | Msa1012000:CDS |
| GACACTTTCATATGATACTG+AGG | 0.649098 | 7_1:-17010843 | Msa1012000:CDS |
| TTCTAGAAGAACCACCAACA+AGG | 0.656258 | 7_1:+17010654 | None:intergenic |
| ACGATTGTTGTCAACTACAA+GGG | 0.662930 | 7_1:-17011361 | Msa1012000:CDS |
| AATGGTGAATCACTTCGTGA+AGG | 0.663773 | 7_1:-17010951 | Msa1012000:CDS |
| CAAGAGCATTAACCCTGACG+AGG | 0.667838 | 7_1:-17010579 | Msa1012000:CDS |
| CTGATATTTCTTCAGCAACG+AGG | 0.669575 | 7_1:+17011326 | None:intergenic |
| TTGCTGGTCTCAATGTAATG+CGG | 0.689400 | 7_1:-17011174 | Msa1012000:CDS |
| ACTTCTGGAGACACTCACCT+CGG | 0.689586 | 7_1:-17010995 | Msa1012000:CDS |
| TATCAAAGTCCTCTCCTCCG+AGG | 0.696240 | 7_1:+17010978 | None:intergenic |
| TTTATAGGAAGGCTACCTCG+AGG | 0.704192 | 7_1:+17010263 | None:intergenic |
| TCTGGAGACACTCACCTCGG+AGG | 0.712848 | 7_1:-17010992 | Msa1012000:CDS |
| TCTGCAGAGGAAGAATCCAG+CGG | 0.740877 | 7_1:-17010200 | Msa1012000:CDS |
| GCAGATGCGAGAGATTGCAG+GGG | 0.747118 | 7_1:-17011290 | Msa1012000:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ATCGTACAAATTTTTATTTA+AGG | - | chr7_1:17010196-17010215 | Msa1012000:CDS | 15.0% |
| !! | AAATATATAGGGAATATAAA+AGG | + | chr7_1:17010230-17010249 | None:intergenic | 15.0% |
| !!! | AAAATTTTCATTTTTGATCT+TGG | - | chr7_1:17010844-17010863 | Msa1012000:CDS | 15.0% |
| !!! | AGACATTATTTTTAATTGTA+AGG | + | chr7_1:17010894-17010913 | None:intergenic | 15.0% |
| !!! | ATCGTACAAATTTTTATTTA+AGG | - | chr7_1:17010196-17010215 | Msa1012000:CDS | 15.0% |
| !! | AAATATATAGGGAATATAAA+AGG | + | chr7_1:17010230-17010249 | None:intergenic | 15.0% |
| !!! | AAAATTTTCATTTTTGATCT+TGG | - | chr7_1:17010844-17010863 | Msa1012000:CDS | 15.0% |
| !!! | AGACATTATTTTTAATTGTA+AGG | + | chr7_1:17010894-17010913 | None:intergenic | 15.0% |
| !!! | TCATTGCTTAAATTTAAGTT+AGG | - | chr7_1:17010093-17010112 | Msa1012000:CDS | 20.0% |
| !!! | CATTGCTTAAATTTAAGTTA+GGG | - | chr7_1:17010094-17010113 | Msa1012000:CDS | 20.0% |
| !! | AATAAAAATTTGTACGATGA+GGG | + | chr7_1:17010194-17010213 | None:intergenic | 20.0% |
| !! | AAATAAAAATTTGTACGATG+AGG | + | chr7_1:17010195-17010214 | None:intergenic | 20.0% |
| !!! | CGAAAAGTTTGAAATATATA+GGG | + | chr7_1:17010241-17010260 | None:intergenic | 20.0% |
| !! | CTCAAAATGATATTATATTG+TGG | - | chr7_1:17010503-17010522 | Msa1012000:CDS | 20.0% |
| !! | TGTGAATCATTAAAATAAGA+AGG | + | chr7_1:17010700-17010719 | None:intergenic | 20.0% |
| !! | ATTTAAGAGAAAGAATAAAG+TGG | - | chr7_1:17010996-17011015 | Msa1012000:CDS | 20.0% |
| !!! | ATGTTTTTGTCTTTTTGAAA+GGG | + | chr7_1:17011524-17011543 | None:intergenic | 20.0% |
| !!! | TATGTTTTTGTCTTTTTGAA+AGG | + | chr7_1:17011525-17011544 | None:intergenic | 20.0% |
| !!! | ATAGAAAAGCATTCTTTTAT+AGG | + | chr7_1:17011678-17011697 | None:intergenic | 20.0% |
| !! | TATTACAATAACGAATGAAA+AGG | - | chr7_1:17011758-17011777 | Msa1012000:intron | 20.0% |
| !! | ATTACAATAACGAATGAAAA+GGG | - | chr7_1:17011759-17011778 | Msa1012000:intron | 20.0% |
| !!! | TCATTGCTTAAATTTAAGTT+AGG | - | chr7_1:17010093-17010112 | Msa1012000:CDS | 20.0% |
| !!! | CATTGCTTAAATTTAAGTTA+GGG | - | chr7_1:17010094-17010113 | Msa1012000:CDS | 20.0% |
| !! | AATAAAAATTTGTACGATGA+GGG | + | chr7_1:17010194-17010213 | None:intergenic | 20.0% |
| !! | AAATAAAAATTTGTACGATG+AGG | + | chr7_1:17010195-17010214 | None:intergenic | 20.0% |
| !!! | CGAAAAGTTTGAAATATATA+GGG | + | chr7_1:17010241-17010260 | None:intergenic | 20.0% |
| !! | CTCAAAATGATATTATATTG+TGG | - | chr7_1:17010503-17010522 | Msa1012000:CDS | 20.0% |
| !! | TGTGAATCATTAAAATAAGA+AGG | + | chr7_1:17010700-17010719 | None:intergenic | 20.0% |
| !! | ATTTAAGAGAAAGAATAAAG+TGG | - | chr7_1:17010996-17011015 | Msa1012000:CDS | 20.0% |
| !!! | ATGTTTTTGTCTTTTTGAAA+GGG | + | chr7_1:17011524-17011543 | None:intergenic | 20.0% |
| !!! | TATGTTTTTGTCTTTTTGAA+AGG | + | chr7_1:17011525-17011544 | None:intergenic | 20.0% |
| !!! | ATAGAAAAGCATTCTTTTAT+AGG | + | chr7_1:17011678-17011697 | None:intergenic | 20.0% |
| !! | TATTACAATAACGAATGAAA+AGG | - | chr7_1:17011758-17011777 | Msa1012000:intron | 20.0% |
| !! | ATTACAATAACGAATGAAAA+GGG | - | chr7_1:17011759-17011778 | Msa1012000:intron | 20.0% |
| ! | GAAATAATTCACAATGATCA+AGG | - | chr7_1:17009938-17009957 | Msa1012000:CDS | 25.0% |
| ! | ACTAATTCTCAAAGATTGAT+TGG | - | chr7_1:17009992-17010011 | Msa1012000:CDS | 25.0% |
| !! | CTTAAATTTAAGTTAGGGTT+AGG | - | chr7_1:17010099-17010118 | Msa1012000:CDS | 25.0% |
| ! | TAAACATGTTAACTGTATAG+CGG | + | chr7_1:17010136-17010155 | None:intergenic | 25.0% |
| !! | GCGAAAAGTTTGAAATATAT+AGG | + | chr7_1:17010242-17010261 | None:intergenic | 25.0% |
| !!! | TTAGTATTGTACTCACTTTT+CGG | + | chr7_1:17010343-17010362 | None:intergenic | 25.0% |
| ! | AGATGTTCAAAATGATAACT+AGG | + | chr7_1:17010404-17010423 | None:intergenic | 25.0% |
| !! | TATTATATTGTGGCCTTTTA+AGG | - | chr7_1:17010513-17010532 | Msa1012000:CDS | 25.0% |
| !!! | ATTTTCATTTTTGATCTTGG+TGG | - | chr7_1:17010847-17010866 | Msa1012000:CDS | 25.0% |
| !!! | AAATAATGTCTTTGAAGTCA+AGG | - | chr7_1:17010903-17010922 | Msa1012000:CDS | 25.0% |
| ! | AGAAAGAATAAAGTGGATAT+TGG | - | chr7_1:17011003-17011022 | Msa1012000:CDS | 25.0% |
| ! | TATAACATCTATGTCAATTG+TGG | + | chr7_1:17011106-17011125 | None:intergenic | 25.0% |
| ! | TCACTTGGTTTAGAAATAAA+TGG | - | chr7_1:17011459-17011478 | Msa1012000:CDS | 25.0% |
| !!! | AAAAGCATTCTTTTATAGGA+AGG | + | chr7_1:17011674-17011693 | None:intergenic | 25.0% |
| !! | TCAAGAAGCTAAGAATTTTA+AGG | - | chr7_1:17011815-17011834 | Msa1012000:intron | 25.0% |
| !!! | ATCTTATTTTTGCTTTGTGT+TGG | + | chr7_1:17011948-17011967 | None:intergenic | 25.0% |
| ! | AAATGTGAATATTTGCTTGA+TGG | - | chr7_1:17011984-17012003 | Msa1012000:CDS | 25.0% |
| ! | GAAATAATTCACAATGATCA+AGG | - | chr7_1:17009938-17009957 | Msa1012000:CDS | 25.0% |
| ! | ACTAATTCTCAAAGATTGAT+TGG | - | chr7_1:17009992-17010011 | Msa1012000:CDS | 25.0% |
| !! | CTTAAATTTAAGTTAGGGTT+AGG | - | chr7_1:17010099-17010118 | Msa1012000:CDS | 25.0% |
| ! | TAAACATGTTAACTGTATAG+CGG | + | chr7_1:17010136-17010155 | None:intergenic | 25.0% |
| !! | GCGAAAAGTTTGAAATATAT+AGG | + | chr7_1:17010242-17010261 | None:intergenic | 25.0% |
| !!! | TTAGTATTGTACTCACTTTT+CGG | + | chr7_1:17010343-17010362 | None:intergenic | 25.0% |
| ! | AGATGTTCAAAATGATAACT+AGG | + | chr7_1:17010404-17010423 | None:intergenic | 25.0% |
| !! | TATTATATTGTGGCCTTTTA+AGG | - | chr7_1:17010513-17010532 | Msa1012000:CDS | 25.0% |
| !!! | ATTTTCATTTTTGATCTTGG+TGG | - | chr7_1:17010847-17010866 | Msa1012000:CDS | 25.0% |
| !!! | AAATAATGTCTTTGAAGTCA+AGG | - | chr7_1:17010903-17010922 | Msa1012000:CDS | 25.0% |
| ! | AGAAAGAATAAAGTGGATAT+TGG | - | chr7_1:17011003-17011022 | Msa1012000:CDS | 25.0% |
| ! | TATAACATCTATGTCAATTG+TGG | + | chr7_1:17011106-17011125 | None:intergenic | 25.0% |
| ! | TCACTTGGTTTAGAAATAAA+TGG | - | chr7_1:17011459-17011478 | Msa1012000:CDS | 25.0% |
| !!! | AAAAGCATTCTTTTATAGGA+AGG | + | chr7_1:17011674-17011693 | None:intergenic | 25.0% |
| !! | TCAAGAAGCTAAGAATTTTA+AGG | - | chr7_1:17011815-17011834 | Msa1012000:intron | 25.0% |
| !!! | ATCTTATTTTTGCTTTGTGT+TGG | + | chr7_1:17011948-17011967 | None:intergenic | 25.0% |
| ! | AAATGTGAATATTTGCTTGA+TGG | - | chr7_1:17011984-17012003 | Msa1012000:CDS | 25.0% |
| TTAGTAAAAGCAACACAAGA+AGG | + | chr7_1:17009977-17009996 | None:intergenic | 30.0% | |
| ! | TCAAACTTTTCGCTAAAGTT+AGG | - | chr7_1:17010249-17010268 | Msa1012000:CDS | 30.0% |
| TAGCATCTGCAAAATCAAAA+TGG | + | chr7_1:17010447-17010466 | None:intergenic | 30.0% | |
| !!! | CACAATTAGCTCTTTTTTGA+AGG | + | chr7_1:17010813-17010832 | None:intergenic | 30.0% |
| TGACATAGATGTTATATGTG+AGG | - | chr7_1:17011110-17011129 | Msa1012000:CDS | 30.0% | |
| GACATAGATGTTATATGTGA+GGG | - | chr7_1:17011111-17011130 | Msa1012000:CDS | 30.0% | |
| AGAAATAAATGGAGATCTCA+TGG | - | chr7_1:17011470-17011489 | Msa1012000:intron | 30.0% | |
| !! | TTTTGTCTTTTTGAAAGGGA+TGG | + | chr7_1:17011520-17011539 | None:intergenic | 30.0% |
| TGTCGATATTAAGGTTTATG+AGG | - | chr7_1:17011572-17011591 | Msa1012000:intron | 30.0% | |
| GTCGATATTAAGGTTTATGA+GGG | - | chr7_1:17011573-17011592 | Msa1012000:intron | 30.0% | |
| ! | TGCTTTTCTATAGATGTTGA+TGG | - | chr7_1:17011687-17011706 | Msa1012000:intron | 30.0% |
| AGTTAATGCAGTTAATGCAT+TGG | - | chr7_1:17011863-17011882 | Msa1012000:intron | 30.0% | |
| ACTTTGGGCATGAAAAAAAA+TGG | - | chr7_1:17012074-17012093 | Msa1012000:CDS | 30.0% | |
| TTAGTAAAAGCAACACAAGA+AGG | + | chr7_1:17009977-17009996 | None:intergenic | 30.0% | |
| ! | TCAAACTTTTCGCTAAAGTT+AGG | - | chr7_1:17010249-17010268 | Msa1012000:CDS | 30.0% |
| TAGCATCTGCAAAATCAAAA+TGG | + | chr7_1:17010447-17010466 | None:intergenic | 30.0% | |
| !!! | CACAATTAGCTCTTTTTTGA+AGG | + | chr7_1:17010813-17010832 | None:intergenic | 30.0% |
| TGACATAGATGTTATATGTG+AGG | - | chr7_1:17011110-17011129 | Msa1012000:CDS | 30.0% | |
| GACATAGATGTTATATGTGA+GGG | - | chr7_1:17011111-17011130 | Msa1012000:CDS | 30.0% | |
| AGAAATAAATGGAGATCTCA+TGG | - | chr7_1:17011470-17011489 | Msa1012000:intron | 30.0% | |
| !! | TTTTGTCTTTTTGAAAGGGA+TGG | + | chr7_1:17011520-17011539 | None:intergenic | 30.0% |
| TGTCGATATTAAGGTTTATG+AGG | - | chr7_1:17011572-17011591 | Msa1012000:intron | 30.0% | |
| GTCGATATTAAGGTTTATGA+GGG | - | chr7_1:17011573-17011592 | Msa1012000:intron | 30.0% | |
| ! | TGCTTTTCTATAGATGTTGA+TGG | - | chr7_1:17011687-17011706 | Msa1012000:intron | 30.0% |
| AGTTAATGCAGTTAATGCAT+TGG | - | chr7_1:17011863-17011882 | Msa1012000:intron | 30.0% | |
| ACTTTGGGCATGAAAAAAAA+TGG | - | chr7_1:17012074-17012093 | Msa1012000:CDS | 30.0% | |
| !! | AAATATGACGGAGTTGGTAT+AGG | - | chr7_1:17009854-17009873 | Msa1012000:CDS | 35.0% |
| ! | GTTAGAGGAAGCTTGATTTT+TGG | + | chr7_1:17010026-17010045 | None:intergenic | 35.0% |
| TACCAAAGACAGTGTTTGTT+GGG | + | chr7_1:17010048-17010067 | None:intergenic | 35.0% | |
| TTACCAAAGACAGTGTTTGT+TGG | + | chr7_1:17010049-17010068 | None:intergenic | 35.0% | |
| ! | TTGATTTTGCAGATGCTAAG+AGG | - | chr7_1:17010449-17010468 | Msa1012000:CDS | 35.0% |
| TTGTAGTTGACAACAATCGT+TGG | + | chr7_1:17010562-17010581 | None:intergenic | 35.0% | |
| AACGATTGTTGTCAACTACA+AGG | - | chr7_1:17010561-17010580 | Msa1012000:CDS | 35.0% | |
| ACGATTGTTGTCAACTACAA+GGG | - | chr7_1:17010562-17010581 | Msa1012000:CDS | 35.0% | |
| !! | TTCATTTTTGATCTTGGTGG+TGG | - | chr7_1:17010850-17010869 | Msa1012000:CDS | 35.0% |
| ! | AGAGGACTTTGATAATCGAA+TGG | - | chr7_1:17010954-17010973 | Msa1012000:CDS | 35.0% |
| ! | TGCAGTTTTCAATCTCCTTA+GGG | + | chr7_1:17011043-17011062 | None:intergenic | 35.0% |
| ! | ATGCAGTTTTCAATCTCCTT+AGG | + | chr7_1:17011044-17011063 | None:intergenic | 35.0% |
| ATTGAAAACTGCATGCGAAA+AGG | - | chr7_1:17011050-17011069 | Msa1012000:CDS | 35.0% | |
| GACACTTTCATATGATACTG+AGG | - | chr7_1:17011080-17011099 | Msa1012000:CDS | 35.0% | |
| ! | CATGTTAAGTTGCTCAAACT+TGG | + | chr7_1:17011166-17011185 | None:intergenic | 35.0% |
| CAAGTTTGAGCAACTTAACA+TGG | - | chr7_1:17011164-17011183 | Msa1012000:CDS | 35.0% | |
| ! | TCTCCATACACTTTTCAAAG+AGG | + | chr7_1:17011191-17011210 | None:intergenic | 35.0% |
| !!! | TACTGCAGGACTTTTTCAAT+GGG | - | chr7_1:17011310-17011329 | Msa1012000:CDS | 35.0% |
| TATATTAAACGTCTCTGCAG+AGG | - | chr7_1:17011710-17011729 | Msa1012000:intron | 35.0% | |
| ! | AATATCTCTTTTATTGCCGC+TGG | + | chr7_1:17011742-17011761 | None:intergenic | 35.0% |
| CAATAACGAATGAAAAGGGA+AGG | - | chr7_1:17011763-17011782 | Msa1012000:intron | 35.0% | |
| TAATGCAGTTAATGCATTGG+AGG | - | chr7_1:17011866-17011885 | Msa1012000:intron | 35.0% | |
| AGGACTATCTTTACAATGTG+AGG | - | chr7_1:17011886-17011905 | Msa1012000:CDS | 35.0% | |
| TGAGGAAAGCTATGAAGAAT+AGG | - | chr7_1:17011904-17011923 | Msa1012000:CDS | 35.0% | |
| AGCATCTCTGAATCTACTTT+GGG | - | chr7_1:17012059-17012078 | Msa1012000:CDS | 35.0% | |
| !! | AAATATGACGGAGTTGGTAT+AGG | - | chr7_1:17009854-17009873 | Msa1012000:CDS | 35.0% |
| ! | GTTAGAGGAAGCTTGATTTT+TGG | + | chr7_1:17010026-17010045 | None:intergenic | 35.0% |
| TACCAAAGACAGTGTTTGTT+GGG | + | chr7_1:17010048-17010067 | None:intergenic | 35.0% | |
| TTACCAAAGACAGTGTTTGT+TGG | + | chr7_1:17010049-17010068 | None:intergenic | 35.0% | |
| ! | TTGATTTTGCAGATGCTAAG+AGG | - | chr7_1:17010449-17010468 | Msa1012000:CDS | 35.0% |
| TTGTAGTTGACAACAATCGT+TGG | + | chr7_1:17010562-17010581 | None:intergenic | 35.0% | |
| AACGATTGTTGTCAACTACA+AGG | - | chr7_1:17010561-17010580 | Msa1012000:CDS | 35.0% | |
| ACGATTGTTGTCAACTACAA+GGG | - | chr7_1:17010562-17010581 | Msa1012000:CDS | 35.0% | |
| !! | TTCATTTTTGATCTTGGTGG+TGG | - | chr7_1:17010850-17010869 | Msa1012000:CDS | 35.0% |
| ! | AGAGGACTTTGATAATCGAA+TGG | - | chr7_1:17010954-17010973 | Msa1012000:CDS | 35.0% |
| ! | TGCAGTTTTCAATCTCCTTA+GGG | + | chr7_1:17011043-17011062 | None:intergenic | 35.0% |
| ! | ATGCAGTTTTCAATCTCCTT+AGG | + | chr7_1:17011044-17011063 | None:intergenic | 35.0% |
| ATTGAAAACTGCATGCGAAA+AGG | - | chr7_1:17011050-17011069 | Msa1012000:CDS | 35.0% | |
| GACACTTTCATATGATACTG+AGG | - | chr7_1:17011080-17011099 | Msa1012000:CDS | 35.0% | |
| ! | CATGTTAAGTTGCTCAAACT+TGG | + | chr7_1:17011166-17011185 | None:intergenic | 35.0% |
| CAAGTTTGAGCAACTTAACA+TGG | - | chr7_1:17011164-17011183 | Msa1012000:CDS | 35.0% | |
| ! | TCTCCATACACTTTTCAAAG+AGG | + | chr7_1:17011191-17011210 | None:intergenic | 35.0% |
| !!! | TACTGCAGGACTTTTTCAAT+GGG | - | chr7_1:17011310-17011329 | Msa1012000:CDS | 35.0% |
| TATATTAAACGTCTCTGCAG+AGG | - | chr7_1:17011710-17011729 | Msa1012000:intron | 35.0% | |
| ! | AATATCTCTTTTATTGCCGC+TGG | + | chr7_1:17011742-17011761 | None:intergenic | 35.0% |
| CAATAACGAATGAAAAGGGA+AGG | - | chr7_1:17011763-17011782 | Msa1012000:intron | 35.0% | |
| TAATGCAGTTAATGCATTGG+AGG | - | chr7_1:17011866-17011885 | Msa1012000:intron | 35.0% | |
| AGGACTATCTTTACAATGTG+AGG | - | chr7_1:17011886-17011905 | Msa1012000:CDS | 35.0% | |
| TGAGGAAAGCTATGAAGAAT+AGG | - | chr7_1:17011904-17011923 | Msa1012000:CDS | 35.0% | |
| AGCATCTCTGAATCTACTTT+GGG | - | chr7_1:17012059-17012078 | Msa1012000:CDS | 35.0% | |
| GTTGGTATAGGAATTGACCT+TGG | - | chr7_1:17009866-17009885 | Msa1012000:CDS | 40.0% | |
| CATACTCATGTGTTGGAGTA+TGG | - | chr7_1:17009894-17009913 | Msa1012000:CDS | 40.0% | |
| AAAAGCAACACAAGAAGGAG+TGG | + | chr7_1:17009972-17009991 | None:intergenic | 40.0% | |
| AACCCAACAAACACTGTCTT+TGG | - | chr7_1:17010043-17010062 | Msa1012000:CDS | 40.0% | |
| !! | GACTACACAATGGGTTAAAG+GGG | + | chr7_1:17010172-17010191 | None:intergenic | 40.0% |
| !! | GGACTACACAATGGGTTAAA+GGG | + | chr7_1:17010173-17010192 | None:intergenic | 40.0% |
| ! | ATGCTAAGAGGTTGATTGGA+AGG | - | chr7_1:17010461-17010480 | Msa1012000:CDS | 40.0% |
| CTGATATTTCTTCAGCAACG+AGG | + | chr7_1:17010600-17010619 | None:intergenic | 40.0% | |
| ! | TTGCTGGTCTCAATGTAATG+CGG | - | chr7_1:17010749-17010768 | Msa1012000:CDS | 40.0% |
| GAGCTAATTGTGTTGAAGAG+AGG | - | chr7_1:17010821-17010840 | Msa1012000:CDS | 40.0% | |
| AATGGTGAATCACTTCGTGA+AGG | - | chr7_1:17010972-17010991 | Msa1012000:CDS | 40.0% | |
| TTTCAATCTCCTTAGGGCTT+TGG | + | chr7_1:17011037-17011056 | None:intergenic | 40.0% | |
| ! | GGACCTCTTTGAAAAGTGTA+TGG | - | chr7_1:17011185-17011204 | Msa1012000:CDS | 40.0% |
| TTGCATTGCTGATGCTAAGA+TGG | - | chr7_1:17011221-17011240 | Msa1012000:CDS | 40.0% | |
| ! | TTCTAGAAGAACCACCAACA+AGG | + | chr7_1:17011272-17011291 | None:intergenic | 40.0% |
| !!! | CTACTGCAGGACTTTTTCAA+TGG | - | chr7_1:17011309-17011328 | Msa1012000:CDS | 40.0% |
| ACATCTCGCAGAATCAAGTT+TGG | + | chr7_1:17011429-17011448 | None:intergenic | 40.0% | |
| ! | GATGTCACTTCATTGTCACT+TGG | - | chr7_1:17011444-17011463 | Msa1012000:CDS | 40.0% |
| CCTTAATATCGACACTGCAT+TGG | + | chr7_1:17011566-17011585 | None:intergenic | 40.0% | |
| !! | CCAATGCAGTGTCGATATTA+AGG | - | chr7_1:17011563-17011582 | Msa1012000:intron | 40.0% |
| ! | AGCCAGTGATAATAACTTGC+TGG | - | chr7_1:17011608-17011627 | Msa1012000:intron | 40.0% |
| !! | GCCAGTGATAATAACTTGCT+GGG | - | chr7_1:17011609-17011628 | Msa1012000:intron | 40.0% |
| ACCCAGCAAGTTATTATCAC+TGG | + | chr7_1:17011613-17011632 | None:intergenic | 40.0% | |
| !! | TTTGCTTGATGGTGACAAGA+AGG | - | chr7_1:17011995-17012014 | Msa1012000:CDS | 40.0% |
| GGAAGAAACCAATGTGTTTG+TGG | - | chr7_1:17012016-17012035 | Msa1012000:CDS | 40.0% | |
| CAACATGTCCACAAACACAT+TGG | + | chr7_1:17012027-17012046 | None:intergenic | 40.0% | |
| TGTGTTTGTGGACATGTTGA+AGG | - | chr7_1:17012028-17012047 | Msa1012000:CDS | 40.0% | |
| GAGCATCTCTGAATCTACTT+TGG | - | chr7_1:17012058-17012077 | Msa1012000:CDS | 40.0% | |
| GTTGGTATAGGAATTGACCT+TGG | - | chr7_1:17009866-17009885 | Msa1012000:CDS | 40.0% | |
| CATACTCATGTGTTGGAGTA+TGG | - | chr7_1:17009894-17009913 | Msa1012000:CDS | 40.0% | |
| AAAAGCAACACAAGAAGGAG+TGG | + | chr7_1:17009972-17009991 | None:intergenic | 40.0% | |
| AACCCAACAAACACTGTCTT+TGG | - | chr7_1:17010043-17010062 | Msa1012000:CDS | 40.0% | |
| !! | GACTACACAATGGGTTAAAG+GGG | + | chr7_1:17010172-17010191 | None:intergenic | 40.0% |
| !! | GGACTACACAATGGGTTAAA+GGG | + | chr7_1:17010173-17010192 | None:intergenic | 40.0% |
| ! | ATGCTAAGAGGTTGATTGGA+AGG | - | chr7_1:17010461-17010480 | Msa1012000:CDS | 40.0% |
| CTGATATTTCTTCAGCAACG+AGG | + | chr7_1:17010600-17010619 | None:intergenic | 40.0% | |
| ! | TTGCTGGTCTCAATGTAATG+CGG | - | chr7_1:17010749-17010768 | Msa1012000:CDS | 40.0% |
| GAGCTAATTGTGTTGAAGAG+AGG | - | chr7_1:17010821-17010840 | Msa1012000:CDS | 40.0% | |
| AATGGTGAATCACTTCGTGA+AGG | - | chr7_1:17010972-17010991 | Msa1012000:CDS | 40.0% | |
| TTTCAATCTCCTTAGGGCTT+TGG | + | chr7_1:17011037-17011056 | None:intergenic | 40.0% | |
| ! | GGACCTCTTTGAAAAGTGTA+TGG | - | chr7_1:17011185-17011204 | Msa1012000:CDS | 40.0% |
| TTGCATTGCTGATGCTAAGA+TGG | - | chr7_1:17011221-17011240 | Msa1012000:CDS | 40.0% | |
| ! | TTCTAGAAGAACCACCAACA+AGG | + | chr7_1:17011272-17011291 | None:intergenic | 40.0% |
| !!! | CTACTGCAGGACTTTTTCAA+TGG | - | chr7_1:17011309-17011328 | Msa1012000:CDS | 40.0% |
| ACATCTCGCAGAATCAAGTT+TGG | + | chr7_1:17011429-17011448 | None:intergenic | 40.0% | |
| ! | GATGTCACTTCATTGTCACT+TGG | - | chr7_1:17011444-17011463 | Msa1012000:CDS | 40.0% |
| CCTTAATATCGACACTGCAT+TGG | + | chr7_1:17011566-17011585 | None:intergenic | 40.0% | |
| !! | CCAATGCAGTGTCGATATTA+AGG | - | chr7_1:17011563-17011582 | Msa1012000:intron | 40.0% |
| ! | AGCCAGTGATAATAACTTGC+TGG | - | chr7_1:17011608-17011627 | Msa1012000:intron | 40.0% |
| !! | GCCAGTGATAATAACTTGCT+GGG | - | chr7_1:17011609-17011628 | Msa1012000:intron | 40.0% |
| ACCCAGCAAGTTATTATCAC+TGG | + | chr7_1:17011613-17011632 | None:intergenic | 40.0% | |
| !! | TTTGCTTGATGGTGACAAGA+AGG | - | chr7_1:17011995-17012014 | Msa1012000:CDS | 40.0% |
| GGAAGAAACCAATGTGTTTG+TGG | - | chr7_1:17012016-17012035 | Msa1012000:CDS | 40.0% | |
| CAACATGTCCACAAACACAT+TGG | + | chr7_1:17012027-17012046 | None:intergenic | 40.0% | |
| TGTGTTTGTGGACATGTTGA+AGG | - | chr7_1:17012028-17012047 | Msa1012000:CDS | 40.0% | |
| GAGCATCTCTGAATCTACTT+TGG | - | chr7_1:17012058-17012077 | Msa1012000:CDS | 40.0% | |
| ! | GCAGAGAAATATGACGGAGT+TGG | - | chr7_1:17009848-17009867 | Msa1012000:CDS | 45.0% |
| CACATGAGTATGTTGTGCCA+AGG | + | chr7_1:17009886-17009905 | None:intergenic | 45.0% | |
| GGCACAACATACTCATGTGT+TGG | - | chr7_1:17009887-17009906 | Msa1012000:CDS | 45.0% | |
| TCATGTGTTGGAGTATGGCA+GGG | - | chr7_1:17009899-17009918 | Msa1012000:CDS | 45.0% | |
| ! | GACAGTGTTTGTTGGGTTAG+AGG | + | chr7_1:17010041-17010060 | None:intergenic | 45.0% |
| !! | GGGACTACACAATGGGTTAA+AGG | + | chr7_1:17010174-17010193 | None:intergenic | 45.0% |
| ACGATGAGGGACTACACAAT+GGG | + | chr7_1:17010181-17010200 | None:intergenic | 45.0% | |
| TACGATGAGGGACTACACAA+TGG | + | chr7_1:17010182-17010201 | None:intergenic | 45.0% | |
| ! | GCAGATGCTAAGAGGTTGAT+TGG | - | chr7_1:17010457-17010476 | Msa1012000:CDS | 45.0% |
| !!! | TGGCCTTTTAAGGTCATTGC+CGG | - | chr7_1:17010523-17010542 | Msa1012000:CDS | 45.0% |
| !! | CGTTGGTTTGTCATTATCCC+CGG | + | chr7_1:17010545-17010564 | None:intergenic | 45.0% |
| !!! | AGAGATTGCAGGGGCATTTT+TGG | - | chr7_1:17010642-17010661 | Msa1012000:CDS | 45.0% |
| AGCAATATCACCCGCATCTT+TGG | + | chr7_1:17010734-17010753 | None:intergenic | 45.0% | |
| AAAGATGCGGGTGATATTGC+TGG | - | chr7_1:17010733-17010752 | Msa1012000:CDS | 45.0% | |
| AATCAATGAACCGACTGCAG+CGG | - | chr7_1:17010774-17010793 | Msa1012000:CDS | 45.0% | |
| ! | TTTGAAGTCAAGGCCACTTC+TGG | - | chr7_1:17010913-17010932 | Msa1012000:CDS | 45.0% |
| CTGCATGCGAAAAGGCAAAA+AGG | - | chr7_1:17011058-17011077 | Msa1012000:CDS | 45.0% | |
| GTAGATGACGTTGTCCTTGT+TGG | - | chr7_1:17011255-17011274 | Msa1012000:CDS | 45.0% | |
| TGCAGTAGCTGCTTCACTTT+GGG | + | chr7_1:17011297-17011316 | None:intergenic | 45.0% | |
| TCATGGATGTCGTGATTCCT+AGG | - | chr7_1:17011487-17011506 | Msa1012000:intron | 45.0% | |
| AAAGGGATGGATGTGTTCCT+AGG | + | chr7_1:17011507-17011526 | None:intergenic | 45.0% | |
| TTTATAGGAAGGCTACCTCG+AGG | + | chr7_1:17011663-17011682 | None:intergenic | 45.0% | |
| ATGAAAAGGGAAGGCTGTCA+AGG | - | chr7_1:17011772-17011791 | Msa1012000:intron | 45.0% | |
| TGAAAAGGGAAGGCTGTCAA+GGG | - | chr7_1:17011773-17011792 | Msa1012000:intron | 45.0% | |
| ! | GCAGAGAAATATGACGGAGT+TGG | - | chr7_1:17009848-17009867 | Msa1012000:CDS | 45.0% |
| CACATGAGTATGTTGTGCCA+AGG | + | chr7_1:17009886-17009905 | None:intergenic | 45.0% | |
| GGCACAACATACTCATGTGT+TGG | - | chr7_1:17009887-17009906 | Msa1012000:CDS | 45.0% | |
| TCATGTGTTGGAGTATGGCA+GGG | - | chr7_1:17009899-17009918 | Msa1012000:CDS | 45.0% | |
| ! | GACAGTGTTTGTTGGGTTAG+AGG | + | chr7_1:17010041-17010060 | None:intergenic | 45.0% |
| !! | GGGACTACACAATGGGTTAA+AGG | + | chr7_1:17010174-17010193 | None:intergenic | 45.0% |
| ACGATGAGGGACTACACAAT+GGG | + | chr7_1:17010181-17010200 | None:intergenic | 45.0% | |
| TACGATGAGGGACTACACAA+TGG | + | chr7_1:17010182-17010201 | None:intergenic | 45.0% | |
| ! | GCAGATGCTAAGAGGTTGAT+TGG | - | chr7_1:17010457-17010476 | Msa1012000:CDS | 45.0% |
| !!! | TGGCCTTTTAAGGTCATTGC+CGG | - | chr7_1:17010523-17010542 | Msa1012000:CDS | 45.0% |
| !! | CGTTGGTTTGTCATTATCCC+CGG | + | chr7_1:17010545-17010564 | None:intergenic | 45.0% |
| !!! | AGAGATTGCAGGGGCATTTT+TGG | - | chr7_1:17010642-17010661 | Msa1012000:CDS | 45.0% |
| AGCAATATCACCCGCATCTT+TGG | + | chr7_1:17010734-17010753 | None:intergenic | 45.0% | |
| AAAGATGCGGGTGATATTGC+TGG | - | chr7_1:17010733-17010752 | Msa1012000:CDS | 45.0% | |
| AATCAATGAACCGACTGCAG+CGG | - | chr7_1:17010774-17010793 | Msa1012000:CDS | 45.0% | |
| ! | TTTGAAGTCAAGGCCACTTC+TGG | - | chr7_1:17010913-17010932 | Msa1012000:CDS | 45.0% |
| CTGCATGCGAAAAGGCAAAA+AGG | - | chr7_1:17011058-17011077 | Msa1012000:CDS | 45.0% | |
| GTAGATGACGTTGTCCTTGT+TGG | - | chr7_1:17011255-17011274 | Msa1012000:CDS | 45.0% | |
| TGCAGTAGCTGCTTCACTTT+GGG | + | chr7_1:17011297-17011316 | None:intergenic | 45.0% | |
| TCATGGATGTCGTGATTCCT+AGG | - | chr7_1:17011487-17011506 | Msa1012000:intron | 45.0% | |
| AAAGGGATGGATGTGTTCCT+AGG | + | chr7_1:17011507-17011526 | None:intergenic | 45.0% | |
| TTTATAGGAAGGCTACCTCG+AGG | + | chr7_1:17011663-17011682 | None:intergenic | 45.0% | |
| ATGAAAAGGGAAGGCTGTCA+AGG | - | chr7_1:17011772-17011791 | Msa1012000:intron | 45.0% | |
| TGAAAAGGGAAGGCTGTCAA+GGG | - | chr7_1:17011773-17011792 | Msa1012000:intron | 45.0% | |
| CTCATGTGTTGGAGTATGGC+AGG | - | chr7_1:17009898-17009917 | Msa1012000:CDS | 50.0% | |
| CATGTGTTGGAGTATGGCAG+GGG | - | chr7_1:17009900-17009919 | Msa1012000:CDS | 50.0% | |
| !!! | GGCCTTTTAAGGTCATTGCC+GGG | - | chr7_1:17010524-17010543 | Msa1012000:CDS | 50.0% |
| !!! | GCCTTTTAAGGTCATTGCCG+GGG | - | chr7_1:17010525-17010544 | Msa1012000:CDS | 50.0% |
| TCCCCGGCAATGACCTTAAA+AGG | + | chr7_1:17010529-17010548 | None:intergenic | 50.0% | |
| !!! | GATTGCAGGGGCATTTTTGG+AGG | - | chr7_1:17010645-17010664 | Msa1012000:CDS | 50.0% |
| GCGAAGAGCTACCAAAGATG+CGG | - | chr7_1:17010720-17010739 | Msa1012000:CDS | 50.0% | |
| CGAAGAGCTACCAAAGATGC+GGG | - | chr7_1:17010721-17010740 | Msa1012000:CDS | 50.0% | |
| ! | ACTTCTGGAGACACTCACCT+CGG | - | chr7_1:17010928-17010947 | Msa1012000:CDS | 50.0% |
| TATCAAAGTCCTCTCCTCCG+AGG | + | chr7_1:17010948-17010967 | None:intergenic | 50.0% | |
| GTGTGAACTCCAAAGCCCTA+AGG | - | chr7_1:17011025-17011044 | Msa1012000:CDS | 50.0% | |
| GATGACGTTGTCCTTGTTGG+TGG | - | chr7_1:17011258-17011277 | Msa1012000:CDS | 50.0% | |
| CTGCAGTAGCTGCTTCACTT+TGG | + | chr7_1:17011298-17011317 | None:intergenic | 50.0% | |
| CAAAGTGAAGCAGCTACTGC+AGG | - | chr7_1:17011296-17011315 | Msa1012000:CDS | 50.0% | |
| !! | CAAGAGCATTAACCCTGACG+AGG | - | chr7_1:17011344-17011363 | Msa1012000:CDS | 50.0% |
| CACAAGCAACAACCTCGTCA+GGG | + | chr7_1:17011359-17011378 | None:intergenic | 50.0% | |
| TGCTTGTGGAGCAGCTATTC+AGG | - | chr7_1:17011371-17011390 | Msa1012000:CDS | 50.0% | |
| TCTGCAGAGGAAGAATCCAG+CGG | - | chr7_1:17011723-17011742 | Msa1012000:intron | 50.0% | |
| CTCATGTGTTGGAGTATGGC+AGG | - | chr7_1:17009898-17009917 | Msa1012000:CDS | 50.0% | |
| CATGTGTTGGAGTATGGCAG+GGG | - | chr7_1:17009900-17009919 | Msa1012000:CDS | 50.0% | |
| !!! | GGCCTTTTAAGGTCATTGCC+GGG | - | chr7_1:17010524-17010543 | Msa1012000:CDS | 50.0% |
| !!! | GCCTTTTAAGGTCATTGCCG+GGG | - | chr7_1:17010525-17010544 | Msa1012000:CDS | 50.0% |
| TCCCCGGCAATGACCTTAAA+AGG | + | chr7_1:17010529-17010548 | None:intergenic | 50.0% | |
| !!! | GATTGCAGGGGCATTTTTGG+AGG | - | chr7_1:17010645-17010664 | Msa1012000:CDS | 50.0% |
| GCGAAGAGCTACCAAAGATG+CGG | - | chr7_1:17010720-17010739 | Msa1012000:CDS | 50.0% | |
| CGAAGAGCTACCAAAGATGC+GGG | - | chr7_1:17010721-17010740 | Msa1012000:CDS | 50.0% | |
| ! | ACTTCTGGAGACACTCACCT+CGG | - | chr7_1:17010928-17010947 | Msa1012000:CDS | 50.0% |
| TATCAAAGTCCTCTCCTCCG+AGG | + | chr7_1:17010948-17010967 | None:intergenic | 50.0% | |
| GTGTGAACTCCAAAGCCCTA+AGG | - | chr7_1:17011025-17011044 | Msa1012000:CDS | 50.0% | |
| GATGACGTTGTCCTTGTTGG+TGG | - | chr7_1:17011258-17011277 | Msa1012000:CDS | 50.0% | |
| CTGCAGTAGCTGCTTCACTT+TGG | + | chr7_1:17011298-17011317 | None:intergenic | 50.0% | |
| CAAAGTGAAGCAGCTACTGC+AGG | - | chr7_1:17011296-17011315 | Msa1012000:CDS | 50.0% | |
| !! | CAAGAGCATTAACCCTGACG+AGG | - | chr7_1:17011344-17011363 | Msa1012000:CDS | 50.0% |
| CACAAGCAACAACCTCGTCA+GGG | + | chr7_1:17011359-17011378 | None:intergenic | 50.0% | |
| TGCTTGTGGAGCAGCTATTC+AGG | - | chr7_1:17011371-17011390 | Msa1012000:CDS | 50.0% | |
| TCTGCAGAGGAAGAATCCAG+CGG | - | chr7_1:17011723-17011742 | Msa1012000:intron | 50.0% | |
| ACGCAGATGCGAGAGATTGC+AGG | - | chr7_1:17010631-17010650 | Msa1012000:CDS | 55.0% | |
| CGCAGATGCGAGAGATTGCA+GGG | - | chr7_1:17010632-17010651 | Msa1012000:CDS | 55.0% | |
| GCAGATGCGAGAGATTGCAG+GGG | - | chr7_1:17010633-17010652 | Msa1012000:CDS | 55.0% | |
| TATGCAAGAGCCGCTGCAGT+CGG | + | chr7_1:17010787-17010806 | None:intergenic | 55.0% | |
| ACTGCAGCGGCTCTTGCATA+TGG | - | chr7_1:17010787-17010806 | Msa1012000:CDS | 55.0% | |
| GAGGTGAGTGTCTCCAGAAG+TGG | + | chr7_1:17010929-17010948 | None:intergenic | 55.0% | |
| CCACAAGCAACAACCTCGTC+AGG | + | chr7_1:17011360-17011379 | None:intergenic | 55.0% | |
| ! | CCTGACGAGGTTGTTGCTTG+TGG | - | chr7_1:17011357-17011376 | Msa1012000:CDS | 55.0% |
| ! | CAGGCTGCTTTGCTGAGTGA+AGG | - | chr7_1:17011390-17011409 | Msa1012000:CDS | 55.0% |
| ACGCAGATGCGAGAGATTGC+AGG | - | chr7_1:17010631-17010650 | Msa1012000:CDS | 55.0% | |
| CGCAGATGCGAGAGATTGCA+GGG | - | chr7_1:17010632-17010651 | Msa1012000:CDS | 55.0% | |
| GCAGATGCGAGAGATTGCAG+GGG | - | chr7_1:17010633-17010652 | Msa1012000:CDS | 55.0% | |
| TATGCAAGAGCCGCTGCAGT+CGG | + | chr7_1:17010787-17010806 | None:intergenic | 55.0% | |
| ACTGCAGCGGCTCTTGCATA+TGG | - | chr7_1:17010787-17010806 | Msa1012000:CDS | 55.0% | |
| GAGGTGAGTGTCTCCAGAAG+TGG | + | chr7_1:17010929-17010948 | None:intergenic | 55.0% | |
| CCACAAGCAACAACCTCGTC+AGG | + | chr7_1:17011360-17011379 | None:intergenic | 55.0% | |
| ! | CCTGACGAGGTTGTTGCTTG+TGG | - | chr7_1:17011357-17011376 | Msa1012000:CDS | 55.0% |
| ! | CAGGCTGCTTTGCTGAGTGA+AGG | - | chr7_1:17011390-17011409 | Msa1012000:CDS | 55.0% |
| TCTGGAGACACTCACCTCGG+AGG | - | chr7_1:17010931-17010950 | Msa1012000:CDS | 60.0% | |
| AGACACTCACCTCGGAGGAG+AGG | - | chr7_1:17010936-17010955 | Msa1012000:CDS | 60.0% | |
| TCTGTTCCTCCTGCTCCTCG+AGG | - | chr7_1:17011645-17011664 | Msa1012000:intron | 60.0% | |
| TCTGGAGACACTCACCTCGG+AGG | - | chr7_1:17010931-17010950 | Msa1012000:CDS | 60.0% | |
| AGACACTCACCTCGGAGGAG+AGG | - | chr7_1:17010936-17010955 | Msa1012000:CDS | 60.0% | |
| TCTGTTCCTCCTGCTCCTCG+AGG | - | chr7_1:17011645-17011664 | Msa1012000:intron | 60.0% | |
| AGGCTACCTCGAGGAGCAGG+AGG | + | chr7_1:17011654-17011673 | None:intergenic | 65.0% | |
| GGAAGGCTACCTCGAGGAGC+AGG | + | chr7_1:17011657-17011676 | None:intergenic | 65.0% | |
| AGGCTACCTCGAGGAGCAGG+AGG | + | chr7_1:17011654-17011673 | None:intergenic | 65.0% | |
| GGAAGGCTACCTCGAGGAGC+AGG | + | chr7_1:17011657-17011676 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 17009845 | 17012100 | 17009845 | ID=Msa1012000;Name=Msa1012000 |
| chr7_1 | mRNA | 17009845 | 17012100 | 17009845 | ID=Msa1012000-mRNA-1;Parent=Msa1012000;Name=Msa1012000-mRNA-1;_AED=0.01;_eAED=0.01;_QI=0|0|0|1|1|1|2|0|619 |
| chr7_1 | exon | 17011881 | 17012100 | 17011881 | ID=Msa1012000-mRNA-1:exon:4264;Parent=Msa1012000-mRNA-1 |
| chr7_1 | exon | 17009845 | 17011484 | 17009845 | ID=Msa1012000-mRNA-1:exon:4263;Parent=Msa1012000-mRNA-1 |
| chr7_1 | CDS | 17011881 | 17012100 | 17011881 | ID=Msa1012000-mRNA-1:cds;Parent=Msa1012000-mRNA-1 |
| chr7_1 | CDS | 17009845 | 17011484 | 17009845 | ID=Msa1012000-mRNA-1:cds;Parent=Msa1012000-mRNA-1 |
| Gene Sequence |
| Protein sequence |
