Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021870 | XP_024627041.1 | 97.418 | 852 | 21 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1744 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021870 | sp|Q9FJD6|RBOHH_ARATH | 59.322 | 885 | 315 | 12 | 8 | 852 | 7 | 886 | 0.0 | 1082 |
| Query id | Subject id | identity % | alignment length | mis matches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021870 | A0A396GYA9 | 97.418 | 852 | 21 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1744 |
| Gene ID | Type | Classification |
|---|
| Gene ID | Type | Classification |
|---|
Co-expression Network
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| Msa1021870 | Msa1060750 | 0.905568 | 3.742750e-80 | -8.615850e-47 |
| Msa1021870 | Msa1106030 | 0.899355 | 2.150771e-77 | -8.615850e-47 |
| Msa1021870 | Msa1149270 | 0.907892 | 3.100599e-81 | -8.615850e-47 |
| Msa1021870 | Msa1256990 | 0.808319 | 3.283682e-50 | -8.615850e-47 |
| Msa0873880 | Msa1021870 | 0.800520 | 1.386757e-48 | -8.615850e-47 |
PPI
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021870 | MtrunA17_Chr7g0238371 | 97.418 | 852 | 21 | 1 | 1 | 852 | 1 | 851 | 0.0 | 1744 |
| Msa1021870 | MtrunA17_Chr1g0192121 | 51.222 | 859 | 371 | 13 | 17 | 852 | 52 | 885 | 0.0 | 891 |
| Msa1021870 | MtrunA17_Chr7g0272591 | 53.739 | 789 | 342 | 11 | 69 | 852 | 125 | 895 | 0.0 | 877 |
| Msa1021870 | MtrunA17_Chr8g0387591 | 52.375 | 800 | 350 | 9 | 68 | 852 | 161 | 944 | 0.0 | 874 |
| Msa1021870 | MtrunA17_Chr2g0301511 | 51.797 | 807 | 351 | 11 | 66 | 852 | 143 | 931 | 0.0 | 834 |
| Msa1021870 | MtrunA17_Chr3g0131401 | 50.752 | 798 | 354 | 13 | 72 | 852 | 148 | 923 | 0.0 | 825 |
| Msa1021870 | MtrunA17_Chr8g0385411 | 48.557 | 797 | 377 | 12 | 69 | 852 | 122 | 898 | 0.0 | 801 |
| Msa1021870 | MtrunA17_Chr3g0131381 | 47.001 | 817 | 380 | 16 | 69 | 852 | 121 | 917 | 0.0 | 729 |
| Msa1021870 | MtrunA17_Chr3g0131361 | 44.226 | 814 | 403 | 15 | 69 | 852 | 118 | 910 | 0.0 | 711 |
| Msa1021870 | MtrunA17_Chr4g0061441 | 44.361 | 798 | 393 | 11 | 64 | 852 | 75 | 830 | 0.0 | 696 |
| Msa1021870 | MtrunA17_Chr2g0291481 | 26.122 | 245 | 145 | 5 | 470 | 711 | 293 | 504 | 7.14e-20 | 95.1 |
| Msa1021870 | MtrunA17_Chr1g0202731 | 26.126 | 222 | 119 | 7 | 470 | 688 | 272 | 451 | 1.04e-14 | 78.6 |
| Msa1021870 | MtrunA17_Chr4g0058571 | 26.906 | 223 | 116 | 8 | 470 | 685 | 280 | 462 | 9.49e-14 | 75.5 |
| Msa1021870 | MtrunA17_Chr1g0202741 | 25.225 | 222 | 121 | 7 | 470 | 688 | 267 | 446 | 1.60e-13 | 74.7 |
| Msa1021870 | MtrunA17_Chr8g0349071 | 24.545 | 220 | 122 | 6 | 470 | 686 | 37 | 215 | 1.24e-11 | 66.6 |
| Msa1021870 | MtrunA17_Chr8g0348531 | 25.862 | 174 | 97 | 4 | 515 | 686 | 316 | 459 | 1.90e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Msa1021870 | AT5G60010.1 | 59.322 | 885 | 315 | 12 | 8 | 852 | 7 | 886 | 0.0 | 1082 |
| Msa1021870 | AT3G45810.1 | 57.612 | 913 | 322 | 9 | 2 | 852 | 3 | 912 | 0.0 | 1054 |
| Msa1021870 | AT1G64060.1 | 52.015 | 794 | 356 | 7 | 68 | 852 | 167 | 944 | 0.0 | 867 |
| Msa1021870 | AT5G47910.1 | 52.190 | 799 | 333 | 13 | 69 | 852 | 157 | 921 | 0.0 | 849 |
| Msa1021870 | AT5G51060.1 | 51.324 | 793 | 362 | 11 | 68 | 852 | 129 | 905 | 0.0 | 848 |
| Msa1021870 | AT1G09090.2 | 49.112 | 788 | 374 | 9 | 71 | 852 | 77 | 843 | 0.0 | 820 |
| Msa1021870 | AT1G19230.2 | 50.433 | 809 | 361 | 11 | 68 | 852 | 160 | 952 | 0.0 | 816 |
| Msa1021870 | AT4G25090.1 | 48.823 | 807 | 361 | 13 | 65 | 852 | 76 | 849 | 0.0 | 811 |
| Msa1021870 | AT1G19230.1 | 50.248 | 806 | 341 | 12 | 68 | 852 | 160 | 926 | 0.0 | 808 |
| Msa1021870 | AT4G25090.2 | 48.692 | 803 | 356 | 14 | 65 | 852 | 76 | 837 | 0.0 | 803 |
| Msa1021870 | AT5G07390.1 | 48.689 | 801 | 373 | 15 | 68 | 852 | 124 | 902 | 0.0 | 795 |
| Msa1021870 | AT4G11230.1 | 46.964 | 807 | 385 | 11 | 68 | 852 | 156 | 941 | 0.0 | 745 |
| Msa1021870 | AT5G07390.2 | 46.718 | 777 | 326 | 18 | 68 | 819 | 124 | 837 | 0.0 | 708 |
| Msa1021870 | AT1G09090.1 | 47.253 | 546 | 277 | 6 | 71 | 610 | 77 | 617 | 0.0 | 549 |
| Msa1021870 | AT5G50160.2 | 27.948 | 229 | 125 | 8 | 470 | 695 | 84 | 275 | 6.32e-21 | 98.2 |
| Msa1021870 | AT5G49740.1 | 25.879 | 398 | 223 | 17 | 305 | 690 | 148 | 485 | 1.95e-20 | 97.4 |
| Msa1021870 | AT5G50160.1 | 27.948 | 229 | 125 | 8 | 470 | 695 | 263 | 454 | 2.58e-20 | 97.1 |
| Msa1021870 | AT5G49740.3 | 25.879 | 398 | 223 | 17 | 305 | 690 | 148 | 485 | 5.41e-20 | 95.9 |
| Msa1021870 | AT5G49740.2 | 29.911 | 224 | 121 | 7 | 470 | 688 | 291 | 483 | 1.24e-19 | 94.0 |
| Msa1021870 | AT5G49730.1 | 28.194 | 227 | 125 | 7 | 470 | 690 | 282 | 476 | 1.60e-18 | 91.3 |
| Msa1021870 | AT5G49730.2 | 28.444 | 225 | 123 | 7 | 470 | 688 | 282 | 474 | 2.78e-18 | 89.7 |
| Msa1021870 | AT5G23990.1 | 29.362 | 235 | 118 | 7 | 457 | 688 | 206 | 395 | 1.38e-16 | 84.7 |
| Msa1021870 | AT5G23990.3 | 29.362 | 235 | 118 | 7 | 457 | 688 | 116 | 305 | 2.42e-16 | 83.6 |
| Msa1021870 | AT5G23990.2 | 29.279 | 222 | 111 | 6 | 470 | 688 | 259 | 437 | 5.27e-16 | 83.2 |
| Msa1021870 | AT5G23980.1 | 28.511 | 235 | 120 | 7 | 457 | 688 | 248 | 437 | 2.66e-15 | 80.9 |
| Msa1021870 | AT1G23020.2 | 26.818 | 220 | 117 | 8 | 470 | 686 | 300 | 478 | 5.67e-14 | 76.6 |
| Msa1021870 | AT1G23020.1 | 26.818 | 220 | 117 | 8 | 470 | 686 | 299 | 477 | 6.44e-14 | 76.3 |
| Msa1021870 | AT1G23020.5 | 26.818 | 220 | 117 | 8 | 470 | 686 | 299 | 477 | 6.44e-14 | 76.3 |
| Msa1021870 | AT1G23020.4 | 26.818 | 220 | 117 | 8 | 470 | 686 | 276 | 454 | 8.70e-14 | 75.9 |
| Msa1021870 | AT1G23020.3 | 26.818 | 220 | 117 | 8 | 470 | 686 | 276 | 454 | 8.70e-14 | 75.9 |
| Msa1021870 | AT1G23020.6 | 26.818 | 220 | 117 | 8 | 470 | 686 | 277 | 455 | 8.78e-14 | 75.9 |
| Msa1021870 | AT1G23020.7 | 26.818 | 220 | 117 | 8 | 470 | 686 | 273 | 451 | 8.82e-14 | 75.9 |
| Msa1021870 | AT1G01580.2 | 23.636 | 220 | 124 | 6 | 470 | 686 | 364 | 542 | 1.97e-13 | 74.7 |
| Msa1021870 | AT1G01580.1 | 23.636 | 220 | 124 | 6 | 470 | 686 | 286 | 464 | 2.92e-13 | 74.3 |
| Msa1021870 | AT1G01590.1 | 22.174 | 230 | 117 | 5 | 470 | 686 | 277 | 457 | 3.25e-12 | 70.9 |
Find 155 sgRNAs with CRISPR-Local
Find 352 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCATCATTTGCTTATTC+TGG | 0.138321 | 7_1:+47024547 | Msa1021870:CDS |
| AATGAAAAGTACCAAGTTTA+TGG | 0.180253 | 7_1:-47024024 | None:intergenic |
| TGCTCATTGGTCTAGGAATT+GGG | 0.210810 | 7_1:+47025977 | Msa1021870:CDS |
| TTGCTCATTGGTCTAGGAAT+TGG | 0.238803 | 7_1:+47025976 | Msa1021870:CDS |
| CTCTAGTTTCCATCCTTATA+AGG | 0.245866 | 7_1:-47025769 | None:intergenic |
| ATGCTATCAAAAGATAAATT+TGG | 0.248228 | 7_1:+47022641 | Msa1021870:CDS |
| TGATCTTTACTCTTATAAAA+TGG | 0.257468 | 7_1:-47024778 | None:intergenic |
| AAATATGGATTATCGTTCTT+TGG | 0.257898 | 7_1:+47023997 | Msa1021870:CDS |
| GGCAGCTTGAAACTCTATTA+AGG | 0.266634 | 7_1:+47023829 | Msa1021870:CDS |
| CAAGAGGGCTTAAGGGTTTA+CGG | 0.270824 | 7_1:+47022534 | Msa1021870:CDS |
| ATTGCAGTTGGCGTAGTTAT+AGG | 0.279898 | 7_1:+47024251 | Msa1021870:CDS |
| AATAATATTAATATCAATAA+TGG | 0.289955 | 7_1:+47022479 | Msa1021870:CDS |
| ACCTTCACCGTTGCATCATT+TGG | 0.293507 | 7_1:+47024502 | Msa1021870:CDS |
| GGTCCTTTGATGAGGATCTT+TGG | 0.299865 | 7_1:-47025910 | None:intergenic |
| ATGCTGCTCTTTCCTTGTAT+TGG | 0.302260 | 7_1:-47024058 | None:intergenic |
| TCACCGCGTGAACGTCATTA+AGG | 0.303134 | 7_1:+47024798 | Msa1021870:CDS |
| CCCCTTGGGATTGCACTTTG+AGG | 0.309571 | 7_1:-47025743 | None:intergenic |
| ATAGAACTCCTATTAGAAAA+TGG | 0.310630 | 7_1:+47023934 | Msa1021870:CDS |
| GAATTACTTTGAATCAAGTT+AGG | 0.312333 | 7_1:+47022869 | Msa1021870:CDS |
| TAATGTGGAAGTTCCTAAAA+AGG | 0.317728 | 7_1:+47022370 | Msa1021870:CDS |
| AGAAATATATGTGCAGAAAA+TGG | 0.319306 | 7_1:+47022847 | Msa1021870:CDS |
| TTTCTTGATAGAACGGTTAC+AGG | 0.326365 | 7_1:+47022557 | Msa1021870:CDS |
| TGCAAGACCAAACTGGAAAA+AGG | 0.326699 | 7_1:+47026921 | Msa1021870:CDS |
| TGGCCGGATTCAATTCCTTT+TGG | 0.336050 | 7_1:+47024522 | Msa1021870:CDS |
| TGTGTTCTTGTACCAAGTTT+TGG | 0.346518 | 7_1:-47023879 | None:intergenic |
| TTTACGCAACATGCAGTTGA+TGG | 0.348553 | 7_1:+47022617 | Msa1021870:CDS |
| GAGGACTTGCCATCTTCATT+TGG | 0.350150 | 7_1:-47026038 | None:intergenic |
| TCCTTATAAGGCTTCCCCTT+GGG | 0.355423 | 7_1:-47025757 | None:intergenic |
| AGGTGCTGCAAGAGGGCTTA+AGG | 0.358329 | 7_1:+47022526 | Msa1021870:CDS |
| GTCGGACAAGAAACTATTCT+TGG | 0.361255 | 7_1:-47024314 | None:intergenic |
| GTACAGATGAATCATCAAAA+TGG | 0.362238 | 7_1:+47022321 | Msa1021870:CDS |
| TCCCAAGGGGAAGCCTTATA+AGG | 0.365752 | 7_1:+47025756 | Msa1021870:CDS |
| ACAAGTCCTCCTGGTATAAC+TGG | 0.377307 | 7_1:+47024404 | Msa1021870:CDS |
| CATTCAAAACTAGATATATC+TGG | 0.379978 | 7_1:-47025000 | None:intergenic |
| TGAAACTCTATTAAGGGAAA+TGG | 0.381478 | 7_1:+47023836 | Msa1021870:CDS |
| GAAAGTATCCATGTATGATT+AGG | 0.382017 | 7_1:-47024580 | None:intergenic |
| ATATAAGAACCTTAGGAGAT+TGG | 0.397795 | 7_1:+47025171 | Msa1021870:CDS |
| TCTTTCAAAATACTTATCAT+TGG | 0.399500 | 7_1:-47026006 | None:intergenic |
| GTAGTTCCACTAGTGCTCTA+TGG | 0.400959 | 7_1:+47024739 | Msa1021870:CDS |
| TAATTATGCTTCTTTGATCA+TGG | 0.411093 | 7_1:+47023681 | Msa1021870:CDS |
| TTCTCCATCACCTCTGCACC+TGG | 0.412455 | 7_1:+47025128 | Msa1021870:CDS |
| TTTCTAATATTGATAATTTG+AGG | 0.414832 | 7_1:+47022441 | Msa1021870:CDS |
| GGTGCTGCAAGAGGGCTTAA+GGG | 0.416339 | 7_1:+47022527 | Msa1021870:CDS |
| GCTTTGTGCTGGTGCTCCAT+AGG | 0.424489 | 7_1:-47025932 | None:intergenic |
| AGTGTTCATATAAGAACCTT+AGG | 0.429591 | 7_1:+47025164 | Msa1021870:CDS |
| GTGTTCTTCTACACATTGTA+AGG | 0.432326 | 7_1:-47024157 | None:intergenic |
| GGGAGCAAGCTTCATTTGAA+TGG | 0.445173 | 7_1:+47026536 | Msa1021870:CDS |
| ATCCTTATAAGGCTTCCCCT+TGG | 0.445531 | 7_1:-47025758 | None:intergenic |
| TATGATGTACTCTTGCTCAT+TGG | 0.447007 | 7_1:+47025964 | Msa1021870:CDS |
| GTACTCTTGCTCATTGGTCT+AGG | 0.449393 | 7_1:+47025970 | Msa1021870:CDS |
| TGGAAGCAAAATGCGAAGAA+TGG | 0.455353 | 7_1:+47022499 | Msa1021870:CDS |
| GTTATCCGAAGAGGAGGTTA+AGG | 0.455792 | 7_1:+47023374 | Msa1021870:CDS |
| AGAGCAGCATATGAAGTAAT+GGG | 0.455926 | 7_1:+47024071 | Msa1021870:CDS |
| AGGCTGCTTATAATCAAAAC+CGG | 0.457705 | 7_1:-47024363 | None:intergenic |
| GAAAGCGGGTAGATGTGTTT+AGG | 0.458595 | 7_1:-47027657 | None:intergenic |
| TCTATATATCCATTATGATC+TGG | 0.460686 | 7_1:-47023715 | None:intergenic |
| TTCTATTTCTCACAAAGGAT+TGG | 0.462234 | 7_1:+47024600 | Msa1021870:CDS |
| CAGAATTTGTAAATGAAAAG+TGG | 0.463230 | 7_1:+47023970 | Msa1021870:CDS |
| AGTGCTTCTGCGAATAGATT+GGG | 0.463469 | 7_1:+47023637 | Msa1021870:CDS |
| TTGATGTAGTTTCAGAAAGC+CGG | 0.466256 | 7_1:+47026790 | Msa1021870:CDS |
| AAGTTTATGTTGTCATCAAA+AGG | 0.476309 | 7_1:-47024218 | None:intergenic |
| GATAAATTTGGACAATGCGT+TGG | 0.476888 | 7_1:+47022653 | Msa1021870:CDS |
| CACCTCCTTAACCTCCTCTT+CGG | 0.478322 | 7_1:-47023379 | None:intergenic |
| GCAGCTTGAAACTCTATTAA+GGG | 0.484143 | 7_1:+47023830 | Msa1021870:CDS |
| GAGCTTGATCCAGATCATAA+TGG | 0.486770 | 7_1:+47023706 | Msa1021870:CDS |
| TTGGAAGTTTCTCCAATACA+AGG | 0.490350 | 7_1:+47024046 | Msa1021870:CDS |
| ATATTGATAATTTGAGGAGC+AGG | 0.490860 | 7_1:+47022447 | Msa1021870:CDS |
| CTTTGTGCTGGTGCTCCATA+GGG | 0.490877 | 7_1:-47025931 | None:intergenic |
| ACACACGAAAGTTCTCGAAT+AGG | 0.491276 | 7_1:+47026964 | Msa1021870:CDS |
| ATCCTCATCAAAGGACCCTA+TGG | 0.491725 | 7_1:+47025916 | Msa1021870:CDS |
| AATTACTTTGAATCAAGTTA+GGG | 0.492462 | 7_1:+47022870 | Msa1021870:CDS |
| GAGTGCTTCTGCGAATAGAT+TGG | 0.496450 | 7_1:+47023636 | Msa1021870:CDS |
| AAGAGCAGCATATGAAGTAA+TGG | 0.497578 | 7_1:+47024070 | Msa1021870:CDS |
| ATACTTGAATCCTTGTGGCC+TGG | 0.497823 | 7_1:-47024947 | None:intergenic |
| GTCTCCAGGTGCAGAGGTGA+TGG | 0.503024 | 7_1:-47025132 | None:intergenic |
| AAAATGCGAAGAATGGAATC+AGG | 0.504037 | 7_1:+47022506 | Msa1021870:CDS |
| CACTTATTGCCATGATTCAG+AGG | 0.509830 | 7_1:+47026745 | Msa1021870:CDS |
| GGTGCAGAGGTGATGGAGAA+AGG | 0.518382 | 7_1:-47025125 | None:intergenic |
| ATGTTGCAGCCTCTGAATCA+TGG | 0.518777 | 7_1:-47026754 | None:intergenic |
| TATCTTGAACCAAATGAAGA+TGG | 0.520669 | 7_1:+47026029 | Msa1021870:CDS |
| TGATGTAGTTTCAGAAAGCC+GGG | 0.521880 | 7_1:+47026791 | Msa1021870:CDS |
| CTTTGATACTTGAATCCTTG+TGG | 0.521989 | 7_1:-47024952 | None:intergenic |
| CATGTTGAATTTGAGAGTCT+CGG | 0.523605 | 7_1:-47024123 | None:intergenic |
| CTATTTGACTAGTGTCTATG+AGG | 0.523871 | 7_1:+47026704 | Msa1021870:CDS |
| TTTATGGCGATACTTGGATC+CGG | 0.524679 | 7_1:+47024344 | Msa1021870:CDS |
| ATACCAAAAGGAATTGAATC+CGG | 0.527977 | 7_1:-47024525 | None:intergenic |
| TTCTGTAGTCCAATCTCCTA+AGG | 0.529329 | 7_1:-47025180 | None:intergenic |
| TTTCATAAGATCATTGCAGT+TGG | 0.531490 | 7_1:+47024239 | Msa1021870:CDS |
| AAGATACATGCACTCCTACA+TGG | 0.533572 | 7_1:-47024283 | None:intergenic |
| TCACCGTTGCATCATTTGGC+CGG | 0.534621 | 7_1:+47024506 | Msa1021870:CDS |
| AGATCATAATGGATATATAG+AGG | 0.536287 | 7_1:+47023717 | Msa1021870:CDS |
| CATTGAGATCGTTCCTAATG+TGG | 0.536666 | 7_1:+47022355 | Msa1021870:CDS |
| GCTTCATTTGAATGGTTCAA+AGG | 0.539793 | 7_1:+47026544 | Msa1021870:CDS |
| ACACTTGTTACAAGTCCTCC+TGG | 0.541013 | 7_1:+47024395 | Msa1021870:CDS |
| GCTCATTGGTCTAGGAATTG+GGG | 0.541341 | 7_1:+47025978 | Msa1021870:CDS |
| CTCCATAGGGTCCTTTGATG+AGG | 0.543105 | 7_1:-47025918 | None:intergenic |
| TAATGCTTATAGCTTTGTGC+TGG | 0.545684 | 7_1:-47025943 | None:intergenic |
| GTAACAAGTGTCAAGTAACT+AGG | 0.545868 | 7_1:-47024383 | None:intergenic |
| TTTACGGTTTCTTGATAGAA+CGG | 0.547318 | 7_1:+47022550 | Msa1021870:CDS |
| CTCTTTATGAAACTGAAAGC+GGG | 0.547870 | 7_1:-47027671 | None:intergenic |
| TCTTTGGTTAGCCATAAACT+TGG | 0.547949 | 7_1:+47024013 | Msa1021870:CDS |
| CAAAATACTTATCATTGGTG+TGG | 0.549167 | 7_1:-47026001 | None:intergenic |
| GGATGAAGAAAATGAAAGCA+AGG | 0.553874 | 7_1:+47022391 | Msa1021870:CDS |
| GAAGATGGCAAACCAAAACT+TGG | 0.555673 | 7_1:+47023867 | Msa1021870:CDS |
| CAAATGATGAGCATACCAAA+AGG | 0.558680 | 7_1:-47024537 | None:intergenic |
| TTAGGCTAAATTCTTGACAA+AGG | 0.559039 | 7_1:-47027639 | None:intergenic |
| GCCAAATGATGCAACGGTGA+AGG | 0.562071 | 7_1:-47024503 | None:intergenic |
| TTCAATGTTTGTGTAAGAGT+AGG | 0.563679 | 7_1:-47027613 | None:intergenic |
| TCAATACCATAGAGCACTAG+TGG | 0.564934 | 7_1:-47024745 | None:intergenic |
| AACCTCAAAGTGCAATCCCA+AGG | 0.570159 | 7_1:+47025741 | Msa1021870:CDS |
| CAGGTAAAGAAGCTGATGCA+TGG | 0.571525 | 7_1:+47022576 | Msa1021870:CDS |
| AAGGGGAAGCCTTATAAGGA+TGG | 0.571783 | 7_1:+47025760 | Msa1021870:CDS |
| AGGTATGGGAGCAGATTCAA+AGG | 0.571790 | 7_1:+47022786 | Msa1021870:intron |
| TTCATAAAGAGAACTTCTGA+AGG | 0.576510 | 7_1:+47027683 | Msa1021870:CDS |
| TTGACTAGTGTCTATGAGGA+AGG | 0.577395 | 7_1:+47026708 | Msa1021870:CDS |
| ACACTCAAGTAATCGTCTCC+AGG | 0.581373 | 7_1:-47025146 | None:intergenic |
| CATAACAGGAAAGGTCTGAG+AGG | 0.581602 | 7_1:+47026440 | Msa1021870:intron |
| AACTATATGAGGCACTTGCA+AGG | 0.582128 | 7_1:+47022821 | Msa1021870:CDS |
| TCGTTGTCACTTACGTGTTG+AGG | 0.582241 | 7_1:-47026057 | None:intergenic |
| AGCTCCGACGAAGATAGAAA+AGG | 0.582277 | 7_1:+47026481 | Msa1021870:CDS |
| TATATACTCCTAATCATACA+TGG | 0.582900 | 7_1:+47024572 | Msa1021870:CDS |
| AGGTGTGACAAGAATGGAGA+TGG | 0.584789 | 7_1:+47023348 | Msa1021870:intron |
| CAAGGATTCAAGTATCAAAG+TGG | 0.587965 | 7_1:+47024955 | Msa1021870:CDS |
| GAAATGGTTAGTGCAGAAGA+TGG | 0.590009 | 7_1:+47023852 | Msa1021870:CDS |
| ATAGGAACTTTAATCCATGT+AGG | 0.594439 | 7_1:+47024269 | Msa1021870:CDS |
| ACTTAGAAACATATTTGCAA+AGG | 0.597998 | 7_1:+47025202 | Msa1021870:CDS |
| ATAACAGGAAAGGTCTGAGA+GGG | 0.601480 | 7_1:+47026441 | Msa1021870:intron |
| TGAATGGTTCAAAGGTGTCA+TGG | 0.602687 | 7_1:+47026552 | Msa1021870:CDS |
| ATGGAATCAGGTGCTGCAAG+AGG | 0.602851 | 7_1:+47022518 | Msa1021870:CDS |
| TCTCTTTATGAAACTGAAAG+CGG | 0.605994 | 7_1:-47027672 | None:intergenic |
| GTCGGAGCTATTGCTACTGA+AGG | 0.606452 | 7_1:-47026467 | None:intergenic |
| TTCTAGCACTATACATGACC+AGG | 0.607954 | 7_1:+47024929 | Msa1021870:CDS |
| TGGTAGGTTATCCGAAGAGG+AGG | 0.608791 | 7_1:+47023368 | Msa1021870:CDS |
| ACCTCAAAGTGCAATCCCAA+GGG | 0.609156 | 7_1:+47025742 | Msa1021870:CDS |
| CGAGACTCTCAAATTCAACA+TGG | 0.610306 | 7_1:+47024124 | Msa1021870:CDS |
| TATCCAAAGATCCTCATCAA+AGG | 0.614918 | 7_1:+47025907 | Msa1021870:CDS |
| GTGACAAGAATGGAGATGGT+AGG | 0.616832 | 7_1:+47023352 | Msa1021870:CDS |
| GTAATGTGTTGCCAAAGTGA+AGG | 0.621469 | 7_1:-47024456 | None:intergenic |
| ATGAAAATTCCAGTTATACC+AGG | 0.623236 | 7_1:-47024413 | None:intergenic |
| ATAGGAGTTCTATACTTGCA+CGG | 0.623551 | 7_1:-47023924 | None:intergenic |
| TGGAATCAGGTGCTGCAAGA+GGG | 0.624765 | 7_1:+47022519 | Msa1021870:CDS |
| AATCCGGCCAAATGATGCAA+CGG | 0.626168 | 7_1:-47024509 | None:intergenic |
| TTTCAGGCAATAATATACAC+AGG | 0.626612 | 7_1:+47024901 | Msa1021870:intron |
| CTATACATGACCAGGCCACA+AGG | 0.631046 | 7_1:+47024937 | Msa1021870:CDS |
| ATACTTTCTATTTCTCACAA+AGG | 0.632880 | 7_1:+47024595 | Msa1021870:CDS |
| AGAGCACTAGTGGAACTACA+AGG | 0.645965 | 7_1:-47024735 | None:intergenic |
| ATCCGAAGAGGAGGTTAAGG+AGG | 0.650542 | 7_1:+47023377 | Msa1021870:CDS |
| GTAATCGTCTCCAGGTGCAG+AGG | 0.653683 | 7_1:-47025138 | None:intergenic |
| AGATGGTAGGTTATCCGAAG+AGG | 0.659477 | 7_1:+47023365 | Msa1021870:CDS |
| AAAGGATTGGCATAAGAAGA+CGG | 0.663961 | 7_1:+47024613 | Msa1021870:CDS |
| AGAACACTTACAAAGTTACG+AGG | 0.706746 | 7_1:+47024173 | Msa1021870:CDS |
| GTATTGACAATTCAAAACCA+AGG | 0.707286 | 7_1:+47025807 | Msa1021870:CDS |
| AAAATTCCAGTTATACCAGG+AGG | 0.721195 | 7_1:-47024410 | None:intergenic |
| CCTCAAAGTGCAATCCCAAG+GGG | 0.727531 | 7_1:+47025743 | Msa1021870:CDS |
| ATACCTTAATGACGTTCACG+CGG | 0.730993 | 7_1:-47024801 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAAAAAAAAAACTTTAGAT+AGG | + | chr7_1:47023139-47023158 | Msa1021870:intron | 10.0% |
| !!! | ATATAAAACTTTGTTAATTT+TGG | - | chr7_1:47026364-47026383 | None:intergenic | 10.0% |
| !!! | TATTACTTTTAATTACAAAT+CGG | + | chr7_1:47027052-47027071 | Msa1021870:intron | 10.0% |
| !!! | TTTCTAATATTGATAATTTG+AGG | + | chr7_1:47022441-47022460 | Msa1021870:CDS | 15.0% |
| !!! | TTTGTTTTTAATGATTTTAG+TGG | + | chr7_1:47022715-47022734 | Msa1021870:intron | 15.0% |
| !!! | TGAATATGTTTTTAGAATTA+CGG | + | chr7_1:47025469-47025488 | Msa1021870:intron | 15.0% |
| !! | TATTATTCTCAAATTATTAC+CGG | + | chr7_1:47026158-47026177 | Msa1021870:intron | 15.0% |
| !! | ACTAAAAGTTAATCTAAATT+AGG | + | chr7_1:47026338-47026357 | Msa1021870:intron | 15.0% |
| !! | ACAAAAAAAAAAAATTGAAC+AGG | - | chr7_1:47027295-47027314 | None:intergenic | 15.0% |
| !!! | TCAATTTTTTTTTTTTGTCA+AGG | + | chr7_1:47027297-47027316 | Msa1021870:intron | 15.0% |
| !!! | TAGAAATTCACATTTTTTTA+AGG | + | chr7_1:47027331-47027350 | Msa1021870:intron | 15.0% |
| !!! | TTGATTTTTAGTAAAATCAT+CGG | - | chr7_1:47027470-47027489 | None:intergenic | 15.0% |
| !! | ATAAAAAAAGAATCTATTTG+AGG | + | chr7_1:47027510-47027529 | Msa1021870:intron | 15.0% |
| !! | ATGCTATCAAAAGATAAATT+TGG | + | chr7_1:47022641-47022660 | Msa1021870:CDS | 20.0% |
| !! | TTGAAAACAATGTTGTAAAT+AGG | + | chr7_1:47022766-47022785 | Msa1021870:intron | 20.0% |
| !! | AATTACTTTGAATCAAGTTA+GGG | + | chr7_1:47022870-47022889 | Msa1021870:CDS | 20.0% |
| !! | TTCATTTAACATGAAAAAGT+AGG | - | chr7_1:47023281-47023300 | None:intergenic | 20.0% |
| !! | ATATCTCGTTACAATTTAAT+CGG | - | chr7_1:47023759-47023778 | None:intergenic | 20.0% |
| !! | ATGAAAAGTGGAAAAAAATA+TGG | + | chr7_1:47023982-47024001 | Msa1021870:CDS | 20.0% |
| !! | TGATCTTTACTCTTATAAAA+TGG | - | chr7_1:47024781-47024800 | None:intergenic | 20.0% |
| !!! | AATTTTTATTTACGCTGAAA+CGG | + | chr7_1:47024854-47024873 | Msa1021870:intron | 20.0% |
| !! | TATTACTAGTTGAAAATTTC+AGG | + | chr7_1:47024885-47024904 | Msa1021870:intron | 20.0% |
| !!! | ACGTATCCATTATTTTTTAA+AGG | + | chr7_1:47025590-47025609 | Msa1021870:intron | 20.0% |
| !!! | CAACAATTATCATATTTCTA+AGG | - | chr7_1:47025672-47025691 | None:intergenic | 20.0% |
| !! | ATAAGTACATCATAACATTA+TGG | - | chr7_1:47025861-47025880 | None:intergenic | 20.0% |
| !! | TCTTTCAAAATACTTATCAT+TGG | - | chr7_1:47026009-47026028 | None:intergenic | 20.0% |
| !!! | ACTAATTCTTTAGATACTTT+TGG | - | chr7_1:47026241-47026260 | None:intergenic | 20.0% |
| !!! | AAGTTTTATATACTTTGTGT+AGG | + | chr7_1:47026373-47026392 | Msa1021870:intron | 20.0% |
| !!! | TGAAAGAGCATATTTTTATT+GGG | + | chr7_1:47026507-47026526 | Msa1021870:CDS | 20.0% |
| !!! | ATATTTTTATTGGGTAACAA+GGG | + | chr7_1:47026516-47026535 | Msa1021870:CDS | 20.0% |
| !! | TATGATAAAAGCTTAATCTT+TGG | - | chr7_1:47026867-47026886 | None:intergenic | 20.0% |
| !!! | ACATTTTCTTAAATCACTTA+GGG | - | chr7_1:47027025-47027044 | None:intergenic | 20.0% |
| !!! | AACATTTTCTTAAATCACTT+AGG | - | chr7_1:47027026-47027045 | None:intergenic | 20.0% |
| !!! | CAAATTTTGTATCTTTGTTA+TGG | + | chr7_1:47027126-47027145 | Msa1021870:intron | 20.0% |
| !!! | TTTGTTATGGTTTTAAATTC+TGG | + | chr7_1:47027139-47027158 | Msa1021870:intron | 20.0% |
| !!! | TGATTTTCAAAGATTTGAAT+AGG | - | chr7_1:47027430-47027449 | None:intergenic | 20.0% |
| !! | TTTATATGAGAAAATGTTTC+TGG | - | chr7_1:47027495-47027514 | None:intergenic | 20.0% |
| !! | TCATTTTCTTCATCCTTTTT+AGG | - | chr7_1:47022386-47022405 | None:intergenic | 25.0% |
| ! | AACAATGTTGTAAATAGGTA+TGG | + | chr7_1:47022771-47022790 | Msa1021870:intron | 25.0% |
| ! | ACAATGTTGTAAATAGGTAT+GGG | + | chr7_1:47022772-47022791 | Msa1021870:intron | 25.0% |
| ! | AGAAATATATGTGCAGAAAA+TGG | + | chr7_1:47022847-47022866 | Msa1021870:CDS | 25.0% |
| ! | GAATTACTTTGAATCAAGTT+AGG | + | chr7_1:47022869-47022888 | Msa1021870:CDS | 25.0% |
| ! | TAAAGTTATTAACATGCGAA+AGG | - | chr7_1:47022993-47023012 | None:intergenic | 25.0% |
| ! | GCATGTTAATAACTTTAGAT+AGG | + | chr7_1:47022996-47023015 | Msa1021870:intron | 25.0% |
| ! | AACTTTAGATAGGCAAATAT+TGG | + | chr7_1:47023149-47023168 | Msa1021870:intron | 25.0% |
| ! | ATGAATGATTTCATATTGAG+TGG | + | chr7_1:47023296-47023315 | Msa1021870:intron | 25.0% |
| ! | ATTGAGTGGAGATATATAAA+TGG | + | chr7_1:47023310-47023329 | Msa1021870:intron | 25.0% |
| !! | TCTAACTCTTTTTGTGTAAA+AGG | + | chr7_1:47023603-47023622 | Msa1021870:intron | 25.0% |
| ! | TAATTATGCTTCTTTGATCA+TGG | + | chr7_1:47023681-47023700 | Msa1021870:CDS | 25.0% |
| ! | TCTATATATCCATTATGATC+TGG | - | chr7_1:47023718-47023737 | None:intergenic | 25.0% |
| !!! | AGATCATAATGGATATATAG+AGG | + | chr7_1:47023717-47023736 | Msa1021870:CDS | 25.0% |
| ! | ATAGAACTCCTATTAGAAAA+TGG | + | chr7_1:47023934-47023953 | Msa1021870:CDS | 25.0% |
| !! | TTTGTGATCCATTTTCTAAT+AGG | - | chr7_1:47023945-47023964 | None:intergenic | 25.0% |
| !! | CTTTTCATTTACAAATTCTG+CGG | - | chr7_1:47023970-47023989 | None:intergenic | 25.0% |
| ! | CAGAATTTGTAAATGAAAAG+TGG | + | chr7_1:47023970-47023989 | Msa1021870:CDS | 25.0% |
| !! | AAATATGGATTATCGTTCTT+TGG | + | chr7_1:47023997-47024016 | Msa1021870:CDS | 25.0% |
| !!! | AATGAAAAGTACCAAGTTTA+TGG | - | chr7_1:47024027-47024046 | None:intergenic | 25.0% |
| !! | TAAACTTGGTACTTTTCATT+TGG | + | chr7_1:47024027-47024046 | Msa1021870:CDS | 25.0% |
| ! | AAGTTTATGTTGTCATCAAA+AGG | - | chr7_1:47024221-47024240 | None:intergenic | 25.0% |
| !!! | AAGTATCGCCATAAATTTTT+CGG | - | chr7_1:47024339-47024358 | None:intergenic | 25.0% |
| !!! | AATTTTCATGGTCTTGATTA+TGG | + | chr7_1:47024427-47024446 | Msa1021870:CDS | 25.0% |
| ! | TATATACTCCTAATCATACA+TGG | + | chr7_1:47024572-47024591 | Msa1021870:CDS | 25.0% |
| !! | ATACTTTCTATTTCTCACAA+AGG | + | chr7_1:47024595-47024614 | Msa1021870:CDS | 25.0% |
| !!! | ATTTTTATTTACGCTGAAAC+GGG | + | chr7_1:47024855-47024874 | Msa1021870:intron | 25.0% |
| ! | CATTCAAAACTAGATATATC+TGG | - | chr7_1:47025003-47025022 | None:intergenic | 25.0% |
| !!! | CAGATATATCTAGTTTTGAA+TGG | + | chr7_1:47025001-47025020 | Msa1021870:CDS | 25.0% |
| ! | AATGGTAATTATGATCTACT+TGG | + | chr7_1:47025019-47025038 | Msa1021870:intron | 25.0% |
| !!! | CTGCAAAATTACTTTTACTT+AGG | + | chr7_1:47025072-47025091 | Msa1021870:intron | 25.0% |
| !!! | TCGAATTTACTCTTTTTTAC+AGG | + | chr7_1:47025099-47025118 | Msa1021870:intron | 25.0% |
| ! | ACTTAGAAACATATTTGCAA+AGG | + | chr7_1:47025202-47025221 | Msa1021870:CDS | 25.0% |
| !! | AAAAATTGAACCACGATTTT+TGG | + | chr7_1:47025515-47025534 | Msa1021870:intron | 25.0% |
| !! | GTCAAGCCTTTAAAAAATAA+TGG | - | chr7_1:47025599-47025618 | None:intergenic | 25.0% |
| !!! | AAACACCCGTTTTTATAAAA+AGG | + | chr7_1:47025622-47025641 | Msa1021870:intron | 25.0% |
| !! | TCCTACCTTTTTATAAAAAC+GGG | - | chr7_1:47025630-47025649 | None:intergenic | 25.0% |
| !! | CTCCTACCTTTTTATAAAAA+CGG | - | chr7_1:47025631-47025650 | None:intergenic | 25.0% |
| !! | TTTTTAGATGATCTCTCATT+AGG | + | chr7_1:47026269-47026288 | Msa1021870:intron | 25.0% |
| ! | ATTTACGGTTTATGTTTATG+TGG | - | chr7_1:47026297-47026316 | None:intergenic | 25.0% |
| ! | ATTCTTAGAGTTAACATAAC+AGG | + | chr7_1:47026426-47026445 | Msa1021870:intron | 25.0% |
| ! | CAATAAAAATATGCTCTTTC+AGG | - | chr7_1:47026508-47026527 | None:intergenic | 25.0% |
| !!! | CTGAAAGAGCATATTTTTAT+TGG | + | chr7_1:47026506-47026525 | Msa1021870:CDS | 25.0% |
| !!! | CATATTTTTATTGGGTAACA+AGG | + | chr7_1:47026515-47026534 | Msa1021870:CDS | 25.0% |
| ! | AGGTAAAAAAGCAAAAAGTT+TGG | - | chr7_1:47026617-47026636 | None:intergenic | 25.0% |
| !! | TCTAAAATTGTGTTACATTG+AGG | - | chr7_1:47026637-47026656 | None:intergenic | 25.0% |
| ! | GAACTAAATCAAAATATACC+CGG | - | chr7_1:47026812-47026831 | None:intergenic | 25.0% |
| ! | CATTTGAAAACAGAAAATGA+CGG | - | chr7_1:47027089-47027108 | None:intergenic | 25.0% |
| !! | TCTGTTTTCAAATGTTTGTA+TGG | + | chr7_1:47027095-47027114 | Msa1021870:intron | 25.0% |
| ! | CGCTGAAAATCTTTATATTA+CGG | + | chr7_1:47027174-47027193 | Msa1021870:intron | 25.0% |
| ! | CTTTATATTACGGAAAAATG+TGG | + | chr7_1:47027184-47027203 | Msa1021870:intron | 25.0% |
| !!! | TTTTTTAAGGTGAATAAGTG+AGG | + | chr7_1:47027344-47027363 | Msa1021870:intron | 25.0% |
| GTACAGATGAATCATCAAAA+TGG | + | chr7_1:47022321-47022340 | Msa1021870:CDS | 30.0% | |
| !! | TTTTTAGGAACTTCCACATT+AGG | - | chr7_1:47022371-47022390 | None:intergenic | 30.0% |
| TAATGTGGAAGTTCCTAAAA+AGG | + | chr7_1:47022370-47022389 | Msa1021870:CDS | 30.0% | |
| ! | ATATTGATAATTTGAGGAGC+AGG | + | chr7_1:47022447-47022466 | Msa1021870:CDS | 30.0% |
| TTTACGGTTTCTTGATAGAA+CGG | + | chr7_1:47022550-47022569 | Msa1021870:CDS | 30.0% | |
| !!! | TGAATCAAGTTAGGGTTTTT+TGG | + | chr7_1:47022878-47022897 | Msa1021870:CDS | 30.0% |
| !!! | GAATCAAGTTAGGGTTTTTT+GGG | + | chr7_1:47022879-47022898 | Msa1021870:CDS | 30.0% |
| TAATCGAACATGAGACTTTA+AGG | - | chr7_1:47023079-47023098 | None:intergenic | 30.0% | |
| ! | TTACTATTTTCTCCTTCATC+TGG | + | chr7_1:47023191-47023210 | Msa1021870:intron | 30.0% |
| ! | TACTATTTTCTCCTTCATCT+GGG | + | chr7_1:47023192-47023211 | Msa1021870:intron | 30.0% |
| AAAATGTTGAAGCAGCTAAA+AGG | - | chr7_1:47023231-47023250 | None:intergenic | 30.0% | |
| !!! | AATGGACTAAAGTCATTTTC+AGG | + | chr7_1:47023328-47023347 | Msa1021870:intron | 30.0% |
| TGCTTCATAGGAAACAAAAT+AGG | - | chr7_1:47023435-47023454 | None:intergenic | 30.0% | |
| TGAAACTCTATTAAGGGAAA+TGG | + | chr7_1:47023836-47023855 | Msa1021870:CDS | 30.0% | |
| TTTCATAAGATCATTGCAGT+TGG | + | chr7_1:47024239-47024258 | Msa1021870:CDS | 30.0% | |
| ATAGGAACTTTAATCCATGT+AGG | + | chr7_1:47024269-47024288 | Msa1021870:CDS | 30.0% | |
| GAAAAATTTATGGCGATACT+TGG | + | chr7_1:47024338-47024357 | Msa1021870:CDS | 30.0% | |
| ATGAAAATTCCAGTTATACC+AGG | - | chr7_1:47024416-47024435 | None:intergenic | 30.0% | |
| ! | TGGTATAACTGGAATTTTCA+TGG | + | chr7_1:47024415-47024434 | Msa1021870:CDS | 30.0% |
| ATACCAAAAGGAATTGAATC+CGG | - | chr7_1:47024528-47024547 | None:intergenic | 30.0% | |
| !! | GAAAGTATCCATGTATGATT+AGG | - | chr7_1:47024583-47024602 | None:intergenic | 30.0% |
| ! | TTCTATTTCTCACAAAGGAT+TGG | + | chr7_1:47024600-47024619 | Msa1021870:CDS | 30.0% |
| TTTCAGGCAATAATATACAC+AGG | + | chr7_1:47024901-47024920 | Msa1021870:intron | 30.0% | |
| AGTGTTCATATAAGAACCTT+AGG | + | chr7_1:47025164-47025183 | Msa1021870:CDS | 30.0% | |
| ATATAAGAACCTTAGGAGAT+TGG | + | chr7_1:47025171-47025190 | Msa1021870:CDS | 30.0% | |
| AGTCAAGGTTTATCAGAAAT+AGG | + | chr7_1:47025444-47025463 | Msa1021870:intron | 30.0% | |
| !! | ACCCGTTTTTATAAAAAGGT+AGG | + | chr7_1:47025626-47025645 | Msa1021870:intron | 30.0% |
| ! | GTATTGACAATTCAAAACCA+AGG | + | chr7_1:47025807-47025826 | Msa1021870:CDS | 30.0% |
| CAAAATACTTATCATTGGTG+TGG | - | chr7_1:47026004-47026023 | None:intergenic | 30.0% | |
| TATCTTGAACCAAATGAAGA+TGG | + | chr7_1:47026029-47026048 | Msa1021870:CDS | 30.0% | |
| !! | ATCTAAAGTGTTGGTCAAAT+CGG | - | chr7_1:47026084-47026103 | None:intergenic | 30.0% |
| GATCTTTCGTTCTTCATTTA+CGG | - | chr7_1:47026312-47026331 | None:intergenic | 30.0% | |
| TAGAGTTAACATAACAGGAA+AGG | + | chr7_1:47026431-47026450 | Msa1021870:intron | 30.0% | |
| AATGTGTTCTTATCTGCATA+TGG | - | chr7_1:47026900-47026919 | None:intergenic | 30.0% | |
| ! | CCTCAATATTAAGGATTTTG+AGG | - | chr7_1:47027228-47027247 | None:intergenic | 30.0% |
| CCTCAAAATCCTTAATATTG+AGG | + | chr7_1:47027225-47027244 | Msa1021870:intron | 30.0% | |
| AAATTGTGGCCTCAATATTA+AGG | - | chr7_1:47027237-47027256 | None:intergenic | 30.0% | |
| !!! | ACAATCATGGTTTTAAGTTG+CGG | - | chr7_1:47027270-47027289 | None:intergenic | 30.0% |
| AATTGAACAGGAAACAATCA+TGG | - | chr7_1:47027283-47027302 | None:intergenic | 30.0% | |
| !!! | TTTTTTTTTGTCAAGGATCC+TGG | + | chr7_1:47027304-47027323 | Msa1021870:intron | 30.0% |
| GATTTGAATAGGAAACAATC+TGG | - | chr7_1:47027419-47027438 | None:intergenic | 30.0% | |
| !! | TCTTGCTATTTACTTGATTC+AGG | + | chr7_1:47027571-47027590 | Msa1021870:intron | 30.0% |
| TTCAATGTTTGTGTAAGAGT+AGG | - | chr7_1:47027616-47027635 | None:intergenic | 30.0% | |
| TTAGGCTAAATTCTTGACAA+AGG | - | chr7_1:47027642-47027661 | None:intergenic | 30.0% | |
| TCTCTTTATGAAACTGAAAG+CGG | - | chr7_1:47027675-47027694 | None:intergenic | 30.0% | |
| GGATGAAGAAAATGAAAGCA+AGG | + | chr7_1:47022391-47022410 | Msa1021870:CDS | 35.0% | |
| AAAATGCGAAGAATGGAATC+AGG | + | chr7_1:47022506-47022525 | Msa1021870:CDS | 35.0% | |
| TTTCTTGATAGAACGGTTAC+AGG | + | chr7_1:47022557-47022576 | Msa1021870:CDS | 35.0% | |
| GATAAATTTGGACAATGCGT+TGG | + | chr7_1:47022653-47022672 | Msa1021870:CDS | 35.0% | |
| ! | CAGATTCAAAGGATTTTGCT+GGG | + | chr7_1:47022797-47022816 | Msa1021870:CDS | 35.0% |
| ! | AGATTCAAAGGATTTTGCTG+GGG | + | chr7_1:47022798-47022817 | Msa1021870:CDS | 35.0% |
| CAAGTGTTCTTTGACATGTA+AGG | + | chr7_1:47022937-47022956 | Msa1021870:intron | 35.0% | |
| ! | ACTATTTTCTCCTTCATCTG+GGG | + | chr7_1:47023193-47023212 | Msa1021870:intron | 35.0% |
| !!! | ATTTTCAGGTGTGACAAGAA+TGG | + | chr7_1:47023342-47023361 | Msa1021870:intron | 35.0% |
| !! | TTTTGTTTCCTATGAAGCAC+TGG | + | chr7_1:47023436-47023455 | Msa1021870:intron | 35.0% |
| ACATCTCTTGAAAACAGATG+TGG | + | chr7_1:47023808-47023827 | Msa1021870:intron | 35.0% | |
| GCAGCTTGAAACTCTATTAA+GGG | + | chr7_1:47023830-47023849 | Msa1021870:CDS | 35.0% | |
| ! | TGTGTTCTTGTACCAAGTTT+TGG | - | chr7_1:47023882-47023901 | None:intergenic | 35.0% |
| ATAGGAGTTCTATACTTGCA+CGG | - | chr7_1:47023927-47023946 | None:intergenic | 35.0% | |
| ! | TCTTTGGTTAGCCATAAACT+TGG | + | chr7_1:47024013-47024032 | Msa1021870:CDS | 35.0% |
| TTGGAAGTTTCTCCAATACA+AGG | + | chr7_1:47024046-47024065 | Msa1021870:CDS | 35.0% | |
| AAGAGCAGCATATGAAGTAA+TGG | + | chr7_1:47024070-47024089 | Msa1021870:CDS | 35.0% | |
| AGAGCAGCATATGAAGTAAT+GGG | + | chr7_1:47024071-47024090 | Msa1021870:CDS | 35.0% | |
| ! | ATCATGTCTCTGTTTTGCAA+AGG | + | chr7_1:47024094-47024113 | Msa1021870:CDS | 35.0% |
| ! | TCATGTCTCTGTTTTGCAAA+GGG | + | chr7_1:47024095-47024114 | Msa1021870:CDS | 35.0% |
| CATGTTGAATTTGAGAGTCT+CGG | - | chr7_1:47024126-47024145 | None:intergenic | 35.0% | |
| GTGTTCTTCTACACATTGTA+AGG | - | chr7_1:47024160-47024179 | None:intergenic | 35.0% | |
| AGAACACTTACAAAGTTACG+AGG | + | chr7_1:47024173-47024192 | Msa1021870:CDS | 35.0% | |
| TTGTCCGACCGAAAAATTTA+TGG | + | chr7_1:47024328-47024347 | Msa1021870:CDS | 35.0% | |
| !! | ATCGCCATAAATTTTTCGGT+CGG | - | chr7_1:47024335-47024354 | None:intergenic | 35.0% |
| AGGCTGCTTATAATCAAAAC+CGG | - | chr7_1:47024366-47024385 | None:intergenic | 35.0% | |
| GTAACAAGTGTCAAGTAACT+AGG | - | chr7_1:47024386-47024405 | None:intergenic | 35.0% | |
| AAAATTCCAGTTATACCAGG+AGG | - | chr7_1:47024413-47024432 | None:intergenic | 35.0% | |
| ! | TATGGCTTTTACCTTCACTT+TGG | + | chr7_1:47024445-47024464 | Msa1021870:CDS | 35.0% |
| CAAATGATGAGCATACCAAA+AGG | - | chr7_1:47024540-47024559 | None:intergenic | 35.0% | |
| TGCTCATCATTTGCTTATTC+TGG | + | chr7_1:47024547-47024566 | Msa1021870:CDS | 35.0% | |
| ! | AAAGGATTGGCATAAGAAGA+CGG | + | chr7_1:47024613-47024632 | Msa1021870:CDS | 35.0% |
| CTGAATCTGTACTGAAATCT+TGG | - | chr7_1:47024678-47024697 | None:intergenic | 35.0% | |
| CTTTGATACTTGAATCCTTG+TGG | - | chr7_1:47024955-47024974 | None:intergenic | 35.0% | |
| CAAGGATTCAAGTATCAAAG+TGG | + | chr7_1:47024955-47024974 | Msa1021870:CDS | 35.0% | |
| ATTGGTAGGGATAAAAAGCA+GGG | - | chr7_1:47025542-47025561 | None:intergenic | 35.0% | |
| TTGCTAAGACTTAAACATGC+AGG | + | chr7_1:47025712-47025731 | Msa1021870:intron | 35.0% | |
| ! | CTCTAGTTTCCATCCTTATA+AGG | - | chr7_1:47025772-47025791 | None:intergenic | 35.0% |
| ! | CCAAGAGTTTTTATTCACCT+TGG | - | chr7_1:47025827-47025846 | None:intergenic | 35.0% |
| CCAAGGTGAATAAAAACTCT+TGG | + | chr7_1:47025824-47025843 | Msa1021870:intron | 35.0% | |
| TATCCAAAGATCCTCATCAA+AGG | + | chr7_1:47025907-47025926 | Msa1021870:CDS | 35.0% | |
| !! | TAATGCTTATAGCTTTGTGC+TGG | - | chr7_1:47025946-47025965 | None:intergenic | 35.0% |
| TATGATGTACTCTTGCTCAT+TGG | + | chr7_1:47025964-47025983 | Msa1021870:CDS | 35.0% | |
| TGACCAACACTTTAGATTGA+AGG | + | chr7_1:47026087-47026106 | Msa1021870:intron | 35.0% | |
| GCTTCATTTGAATGGTTCAA+AGG | + | chr7_1:47026544-47026563 | Msa1021870:CDS | 35.0% | |
| TTAACATGTTTCAACGATGC+AGG | + | chr7_1:47026662-47026681 | Msa1021870:intron | 35.0% | |
| TAACATGTTTCAACGATGCA+GGG | + | chr7_1:47026663-47026682 | Msa1021870:intron | 35.0% | |
| CTATTTGACTAGTGTCTATG+AGG | + | chr7_1:47026704-47026723 | Msa1021870:CDS | 35.0% | |
| TTGATGTAGTTTCAGAAAGC+CGG | + | chr7_1:47026790-47026809 | Msa1021870:CDS | 35.0% | |
| !!! | ATGGTTTTAAATTCTGGCCA+CGG | + | chr7_1:47027145-47027164 | Msa1021870:intron | 35.0% |
| ! | GCGGATTGTAATTGAAATTG+TGG | - | chr7_1:47027251-47027270 | None:intergenic | 35.0% |
| !! | AATGTGAATTTCTAGCTACC+AGG | - | chr7_1:47027325-47027344 | None:intergenic | 35.0% |
| GAATAGGAAACAATCTGGTA+GGG | - | chr7_1:47027414-47027433 | None:intergenic | 35.0% | |
| TGAATAGGAAACAATCTGGT+AGG | - | chr7_1:47027415-47027434 | None:intergenic | 35.0% | |
| ! | GATTCAGGTGTATTTTACTG+TGG | + | chr7_1:47027586-47027605 | Msa1021870:intron | 35.0% |
| CTCTTTATGAAACTGAAAGC+GGG | - | chr7_1:47027674-47027693 | None:intergenic | 35.0% | |
| CATTGAGATCGTTCCTAATG+TGG | + | chr7_1:47022355-47022374 | Msa1021870:CDS | 40.0% | |
| TGGAAGCAAAATGCGAAGAA+TGG | + | chr7_1:47022499-47022518 | Msa1021870:CDS | 40.0% | |
| TTTACGCAACATGCAGTTGA+TGG | + | chr7_1:47022617-47022636 | Msa1021870:CDS | 40.0% | |
| ! | GCAGATTCAAAGGATTTTGC+TGG | + | chr7_1:47022796-47022815 | Msa1021870:CDS | 40.0% |
| ! | TTTTGCTGGGGAACTATATG+AGG | + | chr7_1:47022810-47022829 | Msa1021870:CDS | 40.0% |
| ! | AACTATATGAGGCACTTGCA+AGG | + | chr7_1:47022821-47022840 | Msa1021870:CDS | 40.0% |
| !!! | TCAAGTTAGGGTTTTTTGGG+AGG | + | chr7_1:47022882-47022901 | Msa1021870:CDS | 40.0% |
| ! | TCGAACATGAGACTTTAAGG+AGG | - | chr7_1:47023076-47023095 | None:intergenic | 40.0% |
| CTAAATTAGCCGAGTCAAAC+TGG | - | chr7_1:47023111-47023130 | None:intergenic | 40.0% | |
| AGTGCTTCTGCGAATAGATT+GGG | + | chr7_1:47023637-47023656 | Msa1021870:CDS | 40.0% | |
| GAGCTTGATCCAGATCATAA+TGG | + | chr7_1:47023706-47023725 | Msa1021870:CDS | 40.0% | |
| GGCAGCTTGAAACTCTATTA+AGG | + | chr7_1:47023829-47023848 | Msa1021870:CDS | 40.0% | |
| GAAATGGTTAGTGCAGAAGA+TGG | + | chr7_1:47023852-47023871 | Msa1021870:CDS | 40.0% | |
| GAAGATGGCAAACCAAAACT+TGG | + | chr7_1:47023867-47023886 | Msa1021870:CDS | 40.0% | |
| ATGCTGCTCTTTCCTTGTAT+TGG | - | chr7_1:47024061-47024080 | None:intergenic | 40.0% | |
| CGAGACTCTCAAATTCAACA+TGG | + | chr7_1:47024124-47024143 | Msa1021870:CDS | 40.0% | |
| ATTGCAGTTGGCGTAGTTAT+AGG | + | chr7_1:47024251-47024270 | Msa1021870:CDS | 40.0% | |
| AAGATACATGCACTCCTACA+TGG | - | chr7_1:47024286-47024305 | None:intergenic | 40.0% | |
| GTCGGACAAGAAACTATTCT+TGG | - | chr7_1:47024317-47024336 | None:intergenic | 40.0% | |
| TTTATGGCGATACTTGGATC+CGG | + | chr7_1:47024344-47024363 | Msa1021870:CDS | 40.0% | |
| GTAATGTGTTGCCAAAGTGA+AGG | - | chr7_1:47024459-47024478 | None:intergenic | 40.0% | |
| ATCCTCTCTAAATGCAGACT+TGG | + | chr7_1:47024707-47024726 | Msa1021870:intron | 40.0% | |
| ATCCAAGTCTGCATTTAGAG+AGG | - | chr7_1:47024712-47024731 | None:intergenic | 40.0% | |
| ! | TCAATACCATAGAGCACTAG+TGG | - | chr7_1:47024748-47024767 | None:intergenic | 40.0% |
| ATACCTTAATGACGTTCACG+CGG | - | chr7_1:47024804-47024823 | None:intergenic | 40.0% | |
| TTCTAGCACTATACATGACC+AGG | + | chr7_1:47024929-47024948 | Msa1021870:CDS | 40.0% | |
| TTCTGTAGTCCAATCTCCTA+AGG | - | chr7_1:47025183-47025202 | None:intergenic | 40.0% | |
| GTTCAGTTAGCTATGAAGCA+CGG | + | chr7_1:47025260-47025279 | Msa1021870:intron | 40.0% | |
| GACTAACTGACTATGAAGCA+CGG | - | chr7_1:47025428-47025447 | None:intergenic | 40.0% | |
| GCTTCATAGTCAGTTAGTCA+AGG | + | chr7_1:47025429-47025448 | Msa1021870:intron | 40.0% | |
| CATTGGTAGGGATAAAAAGC+AGG | - | chr7_1:47025543-47025562 | None:intergenic | 40.0% | |
| !! | ACGGACTAAAAGCATTGGTA+GGG | - | chr7_1:47025555-47025574 | None:intergenic | 40.0% |
| !! | TACGGACTAAAAGCATTGGT+AGG | - | chr7_1:47025556-47025575 | None:intergenic | 40.0% |
| ! | TCTGTACGGACTAAAAGCAT+TGG | - | chr7_1:47025560-47025579 | None:intergenic | 40.0% |
| ! | AATGCTTTTAGTCCGTACAG+AGG | + | chr7_1:47025559-47025578 | Msa1021870:intron | 40.0% |
| ACGTTTCTTAGTCCTCTGTA+CGG | - | chr7_1:47025574-47025593 | None:intergenic | 40.0% | |
| ! | TTGCTCATTGGTCTAGGAAT+TGG | + | chr7_1:47025976-47025995 | Msa1021870:CDS | 40.0% |
| ! | TGCTCATTGGTCTAGGAATT+GGG | + | chr7_1:47025977-47025996 | Msa1021870:CDS | 40.0% |
| ! | AGGCCTTCAATCTAAAGTGT+TGG | - | chr7_1:47026093-47026112 | None:intergenic | 40.0% |
| CTTTAGATTGAAGGCCTGTA+TGG | + | chr7_1:47026096-47026115 | Msa1021870:intron | 40.0% | |
| CAACACTGACATATAGACAC+CGG | - | chr7_1:47026180-47026199 | None:intergenic | 40.0% | |
| GGTGTCTATATGTCAGTGTT+GGG | + | chr7_1:47026179-47026198 | Msa1021870:intron | 40.0% | |
| ATAACAGGAAAGGTCTGAGA+GGG | + | chr7_1:47026441-47026460 | Msa1021870:intron | 40.0% | |
| ! | AGGACCTTTTCTATCTTCGT+CGG | - | chr7_1:47026488-47026507 | None:intergenic | 40.0% |
| !! | TGAATGGTTCAAAGGTGTCA+TGG | + | chr7_1:47026552-47026571 | Msa1021870:CDS | 40.0% |
| TTGACTAGTGTCTATGAGGA+AGG | + | chr7_1:47026708-47026727 | Msa1021870:CDS | 40.0% | |
| CACTTATTGCCATGATTCAG+AGG | + | chr7_1:47026745-47026764 | Msa1021870:CDS | 40.0% | |
| AGGCTGCAACATGCTAAAAA+TGG | + | chr7_1:47026765-47026784 | Msa1021870:CDS | 40.0% | |
| TGATGTAGTTTCAGAAAGCC+GGG | + | chr7_1:47026791-47026810 | Msa1021870:CDS | 40.0% | |
| ! | CACATTTTGCAAGACCAAAC+TGG | + | chr7_1:47026914-47026933 | Msa1021870:CDS | 40.0% |
| TGCAAGACCAAACTGGAAAA+AGG | + | chr7_1:47026921-47026940 | Msa1021870:CDS | 40.0% | |
| ! | GAGAAGACCTTTTTCCAGTT+TGG | - | chr7_1:47026931-47026950 | None:intergenic | 40.0% |
| ACACACGAAAGTTCTCGAAT+AGG | + | chr7_1:47026964-47026983 | Msa1021870:CDS | 40.0% | |
| AAATGTGGACGATGCCATTA+CGG | + | chr7_1:47027199-47027218 | Msa1021870:intron | 40.0% | |
| GACAATGCACGATATATGCA+GGG | - | chr7_1:47027392-47027411 | None:intergenic | 40.0% | |
| CAAGAGGGCTTAAGGGTTTA+CGG | + | chr7_1:47022534-47022553 | Msa1021870:CDS | 45.0% | |
| CAGGTAAAGAAGCTGATGCA+TGG | + | chr7_1:47022576-47022595 | Msa1021870:CDS | 45.0% | |
| AGGTATGGGAGCAGATTCAA+AGG | + | chr7_1:47022786-47022805 | Msa1021870:intron | 45.0% | |
| TTAGATAGGCAAAACCCGCT+TGG | + | chr7_1:47023010-47023029 | Msa1021870:intron | 45.0% | |
| TAGATAGGCAAAACCCGCTT+GGG | + | chr7_1:47023011-47023030 | Msa1021870:intron | 45.0% | |
| GTCTCATGTTCGATTATCCC+CGG | + | chr7_1:47023083-47023102 | Msa1021870:intron | 45.0% | |
| GCTCAACTAGTTCGAGCTAA+AGG | - | chr7_1:47023256-47023275 | None:intergenic | 45.0% | |
| AGGTGTGACAAGAATGGAGA+TGG | + | chr7_1:47023348-47023367 | Msa1021870:intron | 45.0% | |
| GTGACAAGAATGGAGATGGT+AGG | + | chr7_1:47023352-47023371 | Msa1021870:CDS | 45.0% | |
| AGATGGTAGGTTATCCGAAG+AGG | + | chr7_1:47023365-47023384 | Msa1021870:CDS | 45.0% | |
| GTTATCCGAAGAGGAGGTTA+AGG | + | chr7_1:47023374-47023393 | Msa1021870:CDS | 45.0% | |
| !! | TATGAAGCACTGGCCCTAAA+CGG | + | chr7_1:47023446-47023465 | Msa1021870:intron | 45.0% |
| !! | CACGACACTGACTCAAACAT+CGG | + | chr7_1:47023470-47023489 | Msa1021870:intron | 45.0% |
| TGCAAGTGTCAATGTCGTGT+TGG | + | chr7_1:47023528-47023547 | Msa1021870:intron | 45.0% | |
| ! | GTGTTGGTATTGTCGAGTGT+CGG | + | chr7_1:47023544-47023563 | Msa1021870:intron | 45.0% |
| GAGTGCTTCTGCGAATAGAT+TGG | + | chr7_1:47023636-47023655 | Msa1021870:CDS | 45.0% | |
| ! | ACACTTGTTACAAGTCCTCC+TGG | + | chr7_1:47024395-47024414 | Msa1021870:CDS | 45.0% |
| ACAAGTCCTCCTGGTATAAC+TGG | + | chr7_1:47024404-47024423 | Msa1021870:CDS | 45.0% | |
| ACCTTCACCGTTGCATCATT+TGG | + | chr7_1:47024502-47024521 | Msa1021870:CDS | 45.0% | |
| AATCCGGCCAAATGATGCAA+CGG | - | chr7_1:47024512-47024531 | None:intergenic | 45.0% | |
| ! | TGGCCGGATTCAATTCCTTT+TGG | + | chr7_1:47024522-47024541 | Msa1021870:CDS | 45.0% |
| ! | AGAGCACTAGTGGAACTACA+AGG | - | chr7_1:47024738-47024757 | None:intergenic | 45.0% |
| GTAGTTCCACTAGTGCTCTA+TGG | + | chr7_1:47024739-47024758 | Msa1021870:CDS | 45.0% | |
| ATACTTGAATCCTTGTGGCC+TGG | - | chr7_1:47024950-47024969 | None:intergenic | 45.0% | |
| ACACTCAAGTAATCGTCTCC+AGG | - | chr7_1:47025149-47025168 | None:intergenic | 45.0% | |
| TTAGCTATGAAGCACGGACA+CGG | + | chr7_1:47025266-47025285 | Msa1021870:intron | 45.0% | |
| TGTTGACGTGTTAGTGTCTG+TGG | - | chr7_1:47025302-47025321 | None:intergenic | 45.0% | |
| AAAGCAGGGACCAAAAATCG+TGG | - | chr7_1:47025528-47025547 | None:intergenic | 45.0% | |
| AACCTCAAAGTGCAATCCCA+AGG | + | chr7_1:47025741-47025760 | Msa1021870:CDS | 45.0% | |
| ACCTCAAAGTGCAATCCCAA+GGG | + | chr7_1:47025742-47025761 | Msa1021870:CDS | 45.0% | |
| TCCTTATAAGGCTTCCCCTT+GGG | - | chr7_1:47025760-47025779 | None:intergenic | 45.0% | |
| ATCCTTATAAGGCTTCCCCT+TGG | - | chr7_1:47025761-47025780 | None:intergenic | 45.0% | |
| ! | AAGGGGAAGCCTTATAAGGA+TGG | + | chr7_1:47025760-47025779 | Msa1021870:CDS | 45.0% |
| GGTCCTTTGATGAGGATCTT+TGG | - | chr7_1:47025913-47025932 | None:intergenic | 45.0% | |
| ATCCTCATCAAAGGACCCTA+TGG | + | chr7_1:47025916-47025935 | Msa1021870:CDS | 45.0% | |
| ! | GTACTCTTGCTCATTGGTCT+AGG | + | chr7_1:47025970-47025989 | Msa1021870:CDS | 45.0% |
| ! | GCTCATTGGTCTAGGAATTG+GGG | + | chr7_1:47025978-47025997 | Msa1021870:CDS | 45.0% |
| GAGGACTTGCCATCTTCATT+TGG | - | chr7_1:47026041-47026060 | None:intergenic | 45.0% | |
| ! | TCGTTGTCACTTACGTGTTG+AGG | - | chr7_1:47026060-47026079 | None:intergenic | 45.0% |
| TAGATTGAAGGCCTGTATGG+CGG | + | chr7_1:47026099-47026118 | Msa1021870:intron | 45.0% | |
| CGGCACGATACTAACATATG+CGG | + | chr7_1:47026119-47026138 | Msa1021870:intron | 45.0% | |
| CGGTGTCTATATGTCAGTGT+TGG | + | chr7_1:47026178-47026197 | Msa1021870:intron | 45.0% | |
| CATAACAGGAAAGGTCTGAG+AGG | + | chr7_1:47026440-47026459 | Msa1021870:intron | 45.0% | |
| AGCTCCGACGAAGATAGAAA+AGG | + | chr7_1:47026481-47026500 | Msa1021870:CDS | 45.0% | |
| GGGAGCAAGCTTCATTTGAA+TGG | + | chr7_1:47026536-47026555 | Msa1021870:CDS | 45.0% | |
| ATGTTGCAGCCTCTGAATCA+TGG | - | chr7_1:47026757-47026776 | None:intergenic | 45.0% | |
| ! | GATTTTCAGCGTAACAACCG+TGG | - | chr7_1:47027165-47027184 | None:intergenic | 45.0% |
| !!! | GGATTTTGAGGTGTCCGTAA+TGG | - | chr7_1:47027216-47027235 | None:intergenic | 45.0% |
| ! | AGGTGAATAAGTGAGGTGTC+TGG | + | chr7_1:47027351-47027370 | Msa1021870:intron | 45.0% |
| ! | GGTGAATAAGTGAGGTGTCT+GGG | + | chr7_1:47027352-47027371 | Msa1021870:intron | 45.0% |
| CACGATATATGCAGGGTTCA+GGG | - | chr7_1:47027385-47027404 | None:intergenic | 45.0% | |
| GGACAATGCACGATATATGC+AGG | - | chr7_1:47027393-47027412 | None:intergenic | 45.0% | |
| GAAAGCGGGTAGATGTGTTT+AGG | - | chr7_1:47027660-47027679 | None:intergenic | 45.0% | |
| !! | AATAATATTAATATCAATAA+TGG | + | chr7_1:47022479-47022498 | Msa1021870:CDS | 5.0% |
| ! | ATGGAATCAGGTGCTGCAAG+AGG | + | chr7_1:47022518-47022537 | Msa1021870:CDS | 50.0% |
| ! | TGGAATCAGGTGCTGCAAGA+GGG | + | chr7_1:47022519-47022538 | Msa1021870:CDS | 50.0% |
| !! | TTGGCCTGGTGGTATTGACT+TGG | + | chr7_1:47023034-47023053 | Msa1021870:intron | 50.0% |
| !! | TGGCCTGGTGGTATTGACTT+GGG | + | chr7_1:47023035-47023054 | Msa1021870:intron | 50.0% |
| !! | GTGGTATTGACTTGGGACCT+GGG | + | chr7_1:47023042-47023061 | Msa1021870:intron | 50.0% |
| !! | TATTGACTTGGGACCTGGGA+GGG | + | chr7_1:47023046-47023065 | Msa1021870:intron | 50.0% |
| TGGTAGGTTATCCGAAGAGG+AGG | + | chr7_1:47023368-47023387 | Msa1021870:CDS | 50.0% | |
| ATCCGAAGAGGAGGTTAAGG+AGG | + | chr7_1:47023377-47023396 | Msa1021870:CDS | 50.0% | |
| CACCTCCTTAACCTCCTCTT+CGG | - | chr7_1:47023382-47023401 | None:intergenic | 50.0% | |
| ! | GTTTAGGGCCAGTGCTTCAT+AGG | - | chr7_1:47023447-47023466 | None:intergenic | 50.0% |
| GTCAGTGTCGTGTCCGTTTA+GGG | - | chr7_1:47023462-47023481 | None:intergenic | 50.0% | |
| AGTCAGTGTCGTGTCCGTTT+AGG | - | chr7_1:47023463-47023482 | None:intergenic | 50.0% | |
| GCCAAATGATGCAACGGTGA+AGG | - | chr7_1:47024506-47024525 | None:intergenic | 50.0% | |
| TCACCGTTGCATCATTTGGC+CGG | + | chr7_1:47024506-47024525 | Msa1021870:CDS | 50.0% | |
| TCACCGCGTGAACGTCATTA+AGG | + | chr7_1:47024798-47024817 | Msa1021870:CDS | 50.0% | |
| CTATACATGACCAGGCCACA+AGG | + | chr7_1:47024937-47024956 | Msa1021870:CDS | 50.0% | |
| GTGTTAGTGTCTGTGGTGTC+CGG | - | chr7_1:47025295-47025314 | None:intergenic | 50.0% | |
| GATTAGGTGTGTCCTGGTGT+CGG | - | chr7_1:47025395-47025414 | None:intergenic | 50.0% | |
| TATGAAGCACGGACACTCCT+CGG | - | chr7_1:47025417-47025436 | None:intergenic | 50.0% | |
| CCTCAAAGTGCAATCCCAAG+GGG | + | chr7_1:47025743-47025762 | Msa1021870:CDS | 50.0% | |
| ! | TCCCAAGGGGAAGCCTTATA+AGG | + | chr7_1:47025756-47025775 | Msa1021870:CDS | 50.0% |
| CTCCATAGGGTCCTTTGATG+AGG | - | chr7_1:47025921-47025940 | None:intergenic | 50.0% | |
| ! | CTTTGTGCTGGTGCTCCATA+GGG | - | chr7_1:47025934-47025953 | None:intergenic | 50.0% |
| TTAGTATCGTGCCGCCATAC+AGG | - | chr7_1:47026113-47026132 | None:intergenic | 50.0% | |
| GTCGGAGCTATTGCTACTGA+AGG | - | chr7_1:47026470-47026489 | None:intergenic | 50.0% | |
| GCACGATATATGCAGGGTTC+AGG | - | chr7_1:47027386-47027405 | None:intergenic | 50.0% | |
| ! | AGGTGCTGCAAGAGGGCTTA+AGG | + | chr7_1:47022526-47022545 | Msa1021870:CDS | 55.0% |
| ! | GGTGCTGCAAGAGGGCTTAA+GGG | + | chr7_1:47022527-47022546 | Msa1021870:CDS | 55.0% |
| TAGGCAAAACCCGCTTGGGT+TGG | + | chr7_1:47023015-47023034 | Msa1021870:intron | 55.0% | |
| GGTCCCAAGTCAATACCACC+AGG | - | chr7_1:47023041-47023060 | None:intergenic | 55.0% | |
| !! | GGTGGTATTGACTTGGGACC+TGG | + | chr7_1:47023041-47023060 | Msa1021870:intron | 55.0% |
| !! | GTATTGACTTGGGACCTGGG+AGG | + | chr7_1:47023045-47023064 | Msa1021870:intron | 55.0% |
| TAGCCGAGTCAAACTGGCAC+CGG | - | chr7_1:47023105-47023124 | None:intergenic | 55.0% | |
| CAGAGCTCAACCCCAGATGA+AGG | - | chr7_1:47023206-47023225 | None:intergenic | 55.0% | |
| !! | GGTGCAGAGGTGATGGAGAA+AGG | - | chr7_1:47025128-47025147 | None:intergenic | 55.0% |
| TTCTCCATCACCTCTGCACC+TGG | + | chr7_1:47025128-47025147 | Msa1021870:CDS | 55.0% | |
| GTAATCGTCTCCAGGTGCAG+AGG | - | chr7_1:47025141-47025160 | None:intergenic | 55.0% | |
| ACCAGGACACACCTAATCCG+AGG | + | chr7_1:47025397-47025416 | Msa1021870:intron | 55.0% | |
| ! | TCCTCGGATTAGGTGTGTCC+TGG | - | chr7_1:47025401-47025420 | None:intergenic | 55.0% |
| CCCCTTGGGATTGCACTTTG+AGG | - | chr7_1:47025746-47025765 | None:intergenic | 55.0% | |
| ! | GCTTTGTGCTGGTGCTCCAT+AGG | - | chr7_1:47025935-47025954 | None:intergenic | 55.0% |
| !! | AAAACCCGCTTGGGTTGGCC+TGG | + | chr7_1:47023020-47023039 | Msa1021870:intron | 60.0% |
| TACCACCAGGCCAACCCAAG+CGG | - | chr7_1:47023028-47023047 | None:intergenic | 60.0% | |
| !! | TTAAGGAGGAGCACCCTCCC+AGG | - | chr7_1:47023062-47023081 | None:intergenic | 60.0% |
| ! | TCCCCGGTGCCAGTTTGACT+CGG | + | chr7_1:47023099-47023118 | Msa1021870:intron | 60.0% |
| AGCCGAGTCAAACTGGCACC+GGG | - | chr7_1:47023104-47023123 | None:intergenic | 60.0% | |
| GTCTCCAGGTGCAGAGGTGA+TGG | - | chr7_1:47025135-47025154 | None:intergenic | 60.0% | |
| TGAAGCACGGACACGGACAC+CGG | + | chr7_1:47025273-47025292 | Msa1021870:intron | 60.0% | |
| CGCAACACATGTCCGACACC+AGG | + | chr7_1:47025380-47025399 | Msa1021870:intron | 60.0% | |
| GCACGGACACTCCTCGGATT+AGG | - | chr7_1:47025411-47025430 | None:intergenic | 60.0% | |
| ACCACCAGGCCAACCCAAGC+GGG | - | chr7_1:47023027-47023046 | None:intergenic | 65.0% | |
| GCCGAGTCAAACTGGCACCG+GGG | - | chr7_1:47023103-47023122 | None:intergenic | 65.0% | |
| !! | ACCCGCTTGGGTTGGCCTGG+TGG | + | chr7_1:47023023-47023042 | Msa1021870:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7_1 | gene | 47022302 | 47027702 | 47022302 | ID=Msa1021870;Name=Msa1021870 |
| chr7_1 | mRNA | 47022302 | 47027702 | 47022302 | ID=Msa1021870-mRNA-1;Parent=Msa1021870;Name=Msa1021870-mRNA-1;_AED=0.08;_eAED=0.08;_QI=0|0|0|1|1|1|14|0|852 |
| chr7_1 | exon | 47022302 | 47022674 | 47022302 | ID=Msa1021870-mRNA-1:exon:9246;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47022788 | 47022953 | 47022788 | ID=Msa1021870-mRNA-1:exon:9247;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47023350 | 47023398 | 47023350 | ID=Msa1021870-mRNA-1:exon:9248;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47023625 | 47023738 | 47023625 | ID=Msa1021870-mRNA-1:exon:9249;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47023825 | 47024634 | 47023825 | ID=Msa1021870-mRNA-1:exon:9250;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47024724 | 47024819 | 47024724 | ID=Msa1021870-mRNA-1:exon:9251;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47024907 | 47025022 | 47024907 | ID=Msa1021870-mRNA-1:exon:9252;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47025121 | 47025223 | 47025121 | ID=Msa1021870-mRNA-1:exon:9253;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47025734 | 47025828 | 47025734 | ID=Msa1021870-mRNA-1:exon:9254;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47025900 | 47026065 | 47025900 | ID=Msa1021870-mRNA-1:exon:9255;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47026448 | 47026600 | 47026448 | ID=Msa1021870-mRNA-1:exon:9256;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47026684 | 47026812 | 47026684 | ID=Msa1021870-mRNA-1:exon:9257;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47026907 | 47026985 | 47026907 | ID=Msa1021870-mRNA-1:exon:9258;Parent=Msa1021870-mRNA-1 |
| chr7_1 | exon | 47027593 | 47027702 | 47027593 | ID=Msa1021870-mRNA-1:exon:9259;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47022302 | 47022674 | 47022302 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47022788 | 47022953 | 47022788 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47023350 | 47023398 | 47023350 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47023625 | 47023738 | 47023625 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47023825 | 47024634 | 47023825 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47024724 | 47024819 | 47024724 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47024907 | 47025022 | 47024907 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47025121 | 47025223 | 47025121 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47025734 | 47025828 | 47025734 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47025900 | 47026065 | 47025900 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47026448 | 47026600 | 47026448 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47026684 | 47026812 | 47026684 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47026907 | 47026985 | 47026907 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| chr7_1 | CDS | 47027593 | 47027702 | 47027593 | ID=Msa1021870-mRNA-1:cds;Parent=Msa1021870-mRNA-1 |
| Gene Sequence |
| Protein sequence |
